Abstract
Background
Mutations in colony-stimulating factor 1 receptor (CSF1R) are known to cause adult-onset leukoencephalopathy with axonal spheroids and pigmented glia (ALSP), which has been recently demonstrated as a primary microgliopathy characterized by cognitive impairment. Although the molecular mechanism underlying CSF1R-mediated microgliopathy remains unclear, therapeutic strategies have generally targeted modulation of microglial function. In particular, the microglial inhibitor, minocycline, has been shown to attenuate learning and memory deficits in several neurodegenerative diseases. The objectives of this study were to investigate the pathogenic mechanisms underlying ALSP and to explore the therapeutic effects of minocycline in an in vivo model of ALSP. We hypothesized that inhibiting microglial activation via minocycline could reverse the behavior and pathological defects in ALSP model mice.
Methods
We generated a Csf1r haploinsufficiency mouse model of ALSP using CRISPR/Cas9 genome editing and conducted electrophysiological recordings of long-term potentiation (LTP) and behavioral tests to validate the recapitulation of clinical ALSP characteristics in 8- to 11-month-old mice. RNA-sequencing was used to explore enriched gene expression in the molecular pathogenesis of ALSP. Microglial activation was assessed by immunofluorescent detection of Iba1 and CD68 in brain sections of male ALSP mice and pro-inflammatory activation and phagocytosis were assessed in Csf1r+/− microglia. Therapeutic effects were assessed by behavioral tests, histological analysis, and morphological examination after four weeks of intraperitoneal injection with minocycline or vehicle control in Csf1r+/− mice and wild-type control littermates.
Results
We found that synaptic function was reduced in LTP recordings of neurons in the hippocampal CA1 region, while behavioral tests showed impaired spatial and cognitive memory specifically in male Csf1r+/− mice. Increased activation, pro-inflammatory cytokine production, and enhanced phagocytic capacity were also observed in Csf1r+/− microglia. Treatment with minocycline could suppress the activation of Csf1r+/− microglia both in vitro and in vivo. Notably, the behavioral and pathological deficits in Csf1r+/− mice were partially rescued by minocycline administration, potentially due to inhibition of microglial inflammation and phagocytosis in Csf1r+/− mice.
Conclusions
Our study shows that CSF1R deficiency results in aberrant microglial activation, characterized by a pro-inflammatory phenotype and enhanced phagocytosis of myelin. Our results also indicate that microglial inhibition by minocycline can ameliorate behavioral impairment and ALSP pathogenesis in CSF1R-deficient male mice, suggesting a potential therapeutic target for CSF1R-related leukoencephalopathy. Collectively, these data support that minocycline confers protective effects against CSF1R-related microgliopathy in male ALSP model mice.
Supplementary Information
The online version contains supplementary material available at 10.1186/s12974-023-02774-1.
Keywords: CSF1R, Microglia, Microgliopathy, Minocycline, ALSP
Introduction
Adult-onset leukoencephalopathy with axonal spheroids and pigmented glia (ALSP), a leukodystrophy characterized by dementia with neuropsychiatric deficits, is considered a single clinicopathologic entity of familial pigmented orthochromatic leukodystrophy (POLD) and hereditary diffuse leukoencephalopathy with axonal spheroids (HDLS), both of which are caused by autosomal dominant mutations in the colony-stimulating factor 1 receptor (CSF1R) gene [1–4].
CSF1R is mainly expressed on microglia in the brain [5], and disruption of CSF1R function results in primary microgliopathy in ALSP [1]. By contrast, dysfunction of microglia-related proteins, such as CSF1R, DAP12 and TREM2, USP18, and IRF8, is associated with secondary microgliopathy in a diverse set of neurological diseases, including Alzheimer’s disease (AD), amyotrophic lateral sclerosis (ALS), Parkinson’s disease (PD) and frontal temporal dementia (FTD) diseases [6–9]. Chitu et al. demonstrated that Csf1r heterozygosity is necessary and sufficient for development of the behavioral and neurodegenerative clinical characteristics observed in ALSP patients [10], and subsequent studies showed that a reduction of CSF1R specifically in microglia is sufficient to confer ALSP [11]. Microgliosis has been documented in both Csf1r+/− mice and Cx3Cr1Cre/+;Csf1rfl/+ mice [10, 11]. Another recent study showed that treatment with the CSF1R inhibitor, PLX5622, to eliminate microglia in adult Csf1r+/− mice could prevent microglial dyshomeostasis and attenuate the pathological phenotypes of Csf1r+/− mice [12]. These studies indicate that microglial dyshomeostasis is a driver of ALSP pathogenesis, collectively supporting the possibility that modulating microglial homeostasis could reverse the pathogenesis of ALSP.
Here, in this study, we conducted long-term potentiation (LTP) assays that showed deficiency for one Csf1r allele results in early impairment of synaptic plasticity in the mouse brain, as well as defects in spatial and cognitive memory in Csf1r+/− ALSP model mice, and furthermore, these deficits were specific to male mice. Subsequent investigation confirmed the aberrant activation of microglia in the Csf1r+/− male mice. We then examined whether the purported "microglia inhibitor", minocycline, a semi-synthetic tetracycline derivative approved by the FDA more than 30 years ago to treat chronic inflammation and neurotoxicity [13–16], showed any therapeutic effects in alleviating microglial dysfunction in ALSP model mice. We found that treatment with minocycline inhibits the activation and inflammatory factor production by Csf1r+/− microglia in vitro and in vivo. Notably, chronic administration of minocycline partially alleviated behavioral deficits and pathologies in 8-month-old Csf1r+/− male mice. Our study provides a potential therapeutic strategy for ALSP by modulating microglial homeostasis in patients with CSF1R variants at high risk of ALSP pathogenesis.
Materials and methods
Reagents
Minocycline (Hydrochloride-CAS 13614-98-7-Calbiochem) was purchased from Sigma Aldrich (M9511; Oakville, ON, Canada). Anti-VGLUT1(RRID: AB_2797887), and anti-PSD95 (RRID: AB_561221) were all bought from Cell Signaling Technology. Anti-CSF1R (RRID: AB_776253), anti-Myelin Basic Protein (RRID: AB_297797), anti-α-Tubulin (RRID: AB_869989), anti GAPDH (RRID: AB_2630358), goat anti-rabbit IgG (H + L) (RRID: AB_10371940) and Alexa Fluor 647 donkey anti-rat IgG H&L (RRID: AB_150155) were all from Abcam. Anti-CSF1R (RRID: AB_884158) and granulocyte–macrophage colony-stimulating factor (GM-CSF) were from R&D Systems. Rabbit anti-Iba1 (RRID: AB_2687911) was purchased from Wako and rat anti-mouse CD68 (RRID: AB_322219) was from Bio-Rad. Alexa Fluor 488-conjugated goat anti-rabbit secondary antibody (RRID: AB_10374301) was bought from Thermo Fisher Scientific. DAPI (D9542) and poly-L-lysine (PLL, P6282) were purchased from Sigma Aldrich. TRIzol (CW05800s) and 100 × phosphatase inhibitor (CW2383S) were from CWBIO. ReverTra Ace qPCR RT Master Mix (R323-01) and HamQ Universal SYBR qPCR Master Mix (q711-03) were all from Vazyme. DMEM (11965126) and 1% penicillin/streptomycin (15140122) were all bought from Gibco. Fetal bovine serum (FBS, HK026) was from NTC. RIPA buffer (AR009550) and BCA Protein Assay Kit (AR0197) were from BOSTER. 50 × protease inhibitor (00329505) was purchased from Roche. Super ECL Detection Reagents (36208ES76) were from Yeasen. Fluoresbrite® YG Carboxylate Microspheres (1.00 µm, 15,702) was bought from Polyscience. Biotin-labeled antibodies and anti-streptomycin peroxidase (Kit-9270) and DAB Kit (DAB0031, 20 ×) were all from MXB. The hematoxylin solution (G1120) was from Solarbio.
Animals and treatments
CSF1R heterozygous (Csf1r+/−; C57BL/6) mouse was generated using the CRISPR/Cas9 gene-editing system. CSF1R homozygous (HO, Csf1r−/−) mouse, CSF1R heterozygous (HE, Csf1r+/−) mouse and CSF1R wild-type (WT, Csf1r+/+) mouse were acquired by self-matching of Csf1r+/− mouse. All mice were bred in the Xiamen University Laboratory Animal Center. Eight-month-old Csf1r+/+ or Csf1r+/− mice were intraperitoneally (i.p.) injected with minocycline (Sigma Aldrich) for one month at a dose of 50 mg/kg/day [17, 18]. The detailed information (number, sex, and age) of mice used in each behavioral experiment is shown in Additional file 1: Table S1.
Primary microglia culture and treatment
Primary microglia were isolated and cultured as described previously [19]. Briefly, brains from newborn pups were obtained and dissected. Mixed cells were suspended in DMEM supplemented with 10% FBS and cultured in 175 cm2 flasks (Nunc, 159910-ROS) coated with poly-L-lysine (PLL, P6282, Sigma Aldrich). The next day, media were replaced with fresh DMEM supplemented with 10% FBS and 25 ng/mL granulocyte–macrophage colony-stimulating factor (GM-CSF, R&D Systems). Microglia were harvested one week later by shaking the flasks at the speed of 220 rpm for 20 min. Cells were then cultured at a density of 1.5 × 106 cells/well or 7 × 105 cells/well in 6-well or 12-well plates and treated with or without 0.02 μM minocycline for 12 h for subsequent experiments according to the previous study [20].
RNA sequencing and analysis
RNA-sequence was performed by Illumina HiSeq™ 2500/4000 and 5 G reads per sample were obtained on average (Gene Denovo Biotechnology Co., Ltd., Guangzhou, China). Detailed gene set enrichment analysis and weighted gene co-expression network analysis (WGCNA) were conducted according to previous literature [21, 22]. Data of all genes from all samples were calculated according to log2 (FPKM + 1). DESeq2 and edgeR software was used to analyze the differentially expressed genes (DEGs). The DEGs were selected as | log2(fold change) |> 1 and P value < 0.05 and were colored red for upregulated genes and blue for downregulated genes. These DEGs were mapped to Gene Ontology (GO) terms, molecular function (MF), cellular component (CC), and biological process (BP), in GO database. Significantly enriched GO terms of DEGs were examined and compared to the genome background through a hypergeometric test of DEGs. Similarly, significantly enriched pathways of DEGs were analyzed with Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway database. Data of samples from 9-month-old Csf1r+/+ or Csf1r+/− mice with or without minocycline treatment (n = 4 per group) were used for WGCNA. Gene co-expression networks were constructed with weighted expression correlations (soft power = 8). Hierarchical cluster analysis was carried out and the clustering results were segmented according to the standards (minModuleSize = 100, detectCutHeight = 0.95) to obtain different gene modules. The bioinformatic analyses were all performed using Omicsmart, an online platform for transcriptome data analysis (https://www.omicsmart.com).
Western blot
Primary microglia or brain tissues were harvested and total proteins were extracted using RIPA buffer containing protease and phosphatase inhibitors. Equal amounts of proteins (20 μg for cell lysates, 50 μg for tissue lysates) were loaded into an 8% SDS-PAGE and transferred onto the PVDF membranes (Millipore, IPVH00010). The membranes were sequentially incubated with primary or secondary antibodies. Proteins were then visualized using Super ECL Detection Reagents and the bands were quantified using ImageJ Launcher (Broken Symmetry Software, 1.4.3.67).
RNA extraction and quantitative real-time PCR (qRT-PCR)
Total RNA was extracted using TRIzol reagent and 1 μg RNA was reverse-transcribed into complementary DNA (cDNA) using ReverTra Ace qPCR RT Master Mix. Target genes were amplified using HamQ Universal SYBR qPCR Master Mix on the LightCycler 480 (Roche, Mannheim, Germany). The mRNA level of the target gene was calculated by the relative amount of the target gene ratio to those of the internal control Actb (2−ΔΔCT). The primer sequences are shown in Additional file 2: Table S2.
IL-1β and TNF-α protein assay
Protein levels of IL-1β and TNF-α in the supernatant of mouse brain lysate or conditioned medium from primary microglia were measured according to the previous methods [23]. In brief, diluted samples were analyzed on the AST-Sc-Lite (a fully auto single-molecule detection machine supplied by Suzhou AstraBio Technology Co., Ltd.). The sample (25 μL) was incubated with Reagent 1 (mainly comprised 0.1 mg/mL magnetic beads coated with capture antibodies and protecting reagents) for 6 min. The samples were then incubated for 4 min under 40°C with Reagent 2 (mainly comprised mouse IL-1β or TNF-α detection antibodies labeled with single-molecule imagine fluorophores supplied by AstraBio). Magnetic beads labeled with fluorophores in the mixtures were absorbed by a magnet. Finally, the single-molecule fluorescent signals were taken and analyzed by the machine. IL-1β and TNF-α protein concentrations were calculated according to the standard curve.
Transmission electron microscopy (TEM)
Mice were anesthetized with 5% chloral hydrate and brain tissues were acquired and fixed with the electron microscope fixative at 4℃ overnight. The corpus callosum was dissected and shaped into a trapezoidal section, fixed in osmium acid, followed by ethanol dehydration and uranium-saturated solution with Leica EM TP (Leica, Germany), and embedded with Spurr’s resin. Images were captured by transmission electron microscope Hitachi HT-7800 (Japan). Demyelination was analyzed by calculating the G-ratio of myelin within at least 8 to 10 fields per sample. The G-ratio is quantified by calculating the ratio of the axonal diameter/the myelinated fiber diameter. At least 100 myelinated axons per high-power field (HPF) in each mouse were randomly analyzed and calculated. The number of synapses per HPF of at least 10 visual fields from 5 mice/genotype was counted.
Immunofluorescence staining
Brain slices or primary microglia were prepared and fixed with 4% paraformaldehyde (PFA). After incubated with the mouse anti-Iba1 (1:200) and anti-CD68 (1:200) overnight at 4°C, slices or cells were then incubated with the Alexa Fluor 488-conjugated goat anti-rabbit secondary antibody (1:500) and Alexa Fluor 647 Donkey anti-Rat IgG H&L (1:500) for 1 h. Z-stack confocal images were captured with an Olympus FV1000MPE-B confocal microscope (Japan). The number of Iba1+ microglia was double-blindly counted by ImageJ software (Version 2006.02.01). The number of branches and Iba1+ CD68+ double-positive cells per HPF in the hippocampus from three to five mice were analyzed by Olympus FV10-ASW 4.0 Viewer software and the 3D microglial morphology was reconstructed by the Imaris software (Bitplane, Belfast, UK, version 9.2.0).
Electrophysiological recording
The electrophysiological recording was performed as described previously [24]. Mice were anesthetized with isoflurane and the brains were then rapidly acquired and placed in ice-cold high-sucrose artificial cerebrospinal fluid (ACSF; 120 mM sucrose, 2.5 mM KCl, 10 mM MgSO4, 1.25 mM NaH2PO4, 26 mM NaHCO3, 10 mM d-glucose, 64 mM NaCl, and 0.5 mM CaCl2, pH 7.4, ~ 310 mOsm) bubbled with carbogen (95% O2 + 5% CO2). Brain slices (400 μm thick) were sectioned using a Leica VT1200S (Germany) vibratome, incubated in ACSF with low magnesium (3.5 mM KCl, 120 mM NaCl, 1.3 mM MgSO4, 10 mM d-glucose, 1.25 mM NaH2PO4, 26 mM NaHCO3, and 2.5 mM CaCl2 (pH 7.4), ~ 300 mOsm) bubbled with carbogen (95% O2 + 5% CO2) at 32 °C for 1 h. Mouse LTP was recorded by Axon™ Digidata 1550 (USA) and Diaphragm clamp Amplifier (Axon CNS, Multiclamp 700B, USA). Schaffer peripheral inputs in CA3 were stimulated by Concentric Bipolar Electrode (FHC, CBARC75, Inc. Bowdoin, ME, USA). Field excitatory postsynaptic potential (fEPSP) of Schaffer lateral pathways in the CA1 was recorded with 800 kΩ-2 MΩ epoxy glass (Sutter Instrument, BF150-86–10, USA). After a 20-min stable baseline recording, LTP was induced by high-frequency stimulation (HFS, two trains of 100-Hz stimuli with an interval of 30 s), followed by continued recording for 60 min.
Myelin sheath purification and phagocytosis assay
Myelin sheath was purified as previously described [25] and stored at − 80°C for further use. The pHrodo-conjugated myelin sheath was acquired by incubating the myelin sheath with Amine-Reactive pHrodo™ Dyes for 1 h at RT. Before use, the pHrodo-conjugated myelin sheath was suspended in DMEM to the final concentration of 1.2 mg/mL. Primary microglia were seeded in chamber slides (1 × 105 cells per well) and treated with phagocytic beads (Alexa Fluor 488, 1:15,000), or pHrodo myelin sheath (Alexa Fluor 568, 1:1000) for 3 h. Cells were then fixed with 4% PFA and subjected to immunostaining with the rabbit anti-Iba1 (1:200) at 4°C overnight, following stained with donkey anti-rabbit IgG H&L (1:500, Alexa Fluor 568) or Goat anti-rabbit IgG H&L (1:500, Alexa Fluor 488). Images were captured with an Olympus FV1000MPE-B confocal microscope (Japan). The number of Iba1+ cells co-localized with phagocytic beads or pHrodo myelin sheath was manually counted. Meanwhile, the fluorescence area of pHrodo myelin sheath within each Iba1+ cell was calculated and analyzed using the "ROI (region of interest) " by setting analysis parameters as “area”, “mean gray value”, “limit to threshold” in the "measure" of ImageJ software (Version 2006.02.01). Four or five fields in each group from three independent experiments were analyzed.
Behavior tests
Before behavioral experiments, all the mice were gently touched for 3 days to avoid stress responses and placed in the test chamber for more than 30 min to adapt to the environment. All the behavior tests were performed and analyzed using CleverSys TopScanLite animal behavior analysis system (USA).
T-maze test
T-maze was used to evaluate the working memory of mice. The length of T-maze arms is 30 × 6 × 10 cm. At the beginning of the test, mice were placed in the initial arm, and the trajectory of mice was collected by Clever Sys system for 5 min [24]. The alternation triplet (%) within three arms of each mouse was analyzed.
Novel object recognition test (NOR)
NOR was mainly used to evaluate the spatial alternation and working memory of mice [26]. The training was divided into three stages. In the training stage, each mouse was allowed to move freely in a box of 40× 40× 40 cm for 10 min to adapt to the environment. In the test stage (old object recognition training), two identical objects wrapped in the red paper were prepared and labeled as A or B, which were placed on two opposite angles, allowing the mice to explore freely. The test time was 10 min. In the novel object test stage, object B was replaced with C (new object) wrapped in yellow paper and marked as C. Each mouse was allowed to explore object A or C freely for 10 min. The time of exploring object A or C was recorded. Finally, the time ratio of the exploring object was analyzed and indicated as the new object recognition index (RI) = C/(A + C) × 100%.
Open field test
The open-field test was performed according to previous reports [27]. Mice were allowed to explore freely for 10 min. The time and distance of spontaneous activity of mice in the center of the open field box were analyzed.
Light–dark transition test
Light–dark transition test was used to test the anxiety-like behavior of mice, which was first described by Crawley and Goodwin (1980) [28]. The light–dark box was mainly composed of two different boxes (40 × 15× 10 cm), namely a black box and a white box. At the beginning of the test, mice were placed at the door of the black box with their head facing the white box and were free to explore for 10 min. The time staying in the white box was observed and analyzed.
Sucrose preference test (SPT)
SPT was used to assess depression-like behavior in mice. The experiment is performed as previously described [27]. The sucrose preference test lasted for 2 days and consisted of two processes: the training process and the testing process. During the training process, all mice were given a bottle of 1% (W/V) sucrose in each cage during the first 24 h. During the test process, every mouse was placed in a separate cage containing one bottle of 1% (W/V) sucrose and one bottle of pure water. The position of the two bottles was changed after 6 h. Sucrose preference (%) is calculated and analyzed according to the following formula: 1% sucrose consumption/(1% sucrose consumption + pure water consumption) × 100%.
Statistical analysis
Statistical analysis was performed in a double-blinded manner using GraphPad Prism Software (GraphPad Software, CA, USA; version 8.0.2). The unpaired two-tailed Student's t-test was used to compare two groups. One-way or two-way analysis of variance (ANOVA) post-Sidak’s multiple comparisons test was used for the comparison of more than two groups. Data were expressed as mean ± SEM. A p-value less than 0.05 was considered statistically significant.
Results
Impaired synaptic function in CRISPR/Cas9-based Csf1r+/− mouse model
Previous studies have shown that memory loss is one of the initial symptoms presenting in ALSP patients [1, 29, 30]. To investigate whether deficiency for one Csf1r allele results in early impairment of synaptic plasticity, we generated Csf1r haploinsufficient mice using CRISPR/Cas9 genome editing (Additional file 7: Fig. S1A–H). We then examined the effects of Csf1r haploinsufficiency on the functional electrophysiological characteristics of synapses in the hippocampal CA1 brain region of Csf1r+/− mice by evaluating LTP, a form of synaptic plasticity that contributes to learning and memory formation. LTP elicited by high-frequency stimulation (HFS) was significantly decreased in 3- to 5-month-old Csf1r+/− male mice compared to that in wild-type (WT) littermates (Fig. 1A, B) and further substantially reduced in 10- or 11-month-old Csf1r+/− male mice (Fig. 1C, D). However, the LTP elicited by HFS was not significantly affected in 8- or 9-month-old female mice (Additional file 7: Fig. S2A, B). Spontaneous alternation in T-maze tests showed that spatial working memory was also impaired in Csf1r+/− male mice compared with their Csf1r+/+ male littermates (Fig. 1E). Evaluation of hippocampal recognition memory using NOR tests in these mice showed that Csf1r+/− male mice spent less time exploring the novel object than that of their male Csf1r+/+ littermates (Fig. 1F), although no significant differences were observed in T-maze or NOR tests between Csf1r+/− and Csf1r+/+ female mice. Light–dark transition tests showed clear anxiety-like behaviors (Fig. 1G) in these ALSP male mice, but not in control males or female mice. Anxiety or depression-like behaviors, validated by open-field tests (Fig. 1H) or sucrose preference tests (Fig. 1G–I), were also observed in those Csf1r+/− male mice, but not in control males or female mice, which was consistent with those previous studies [10]. Taken together, these results demonstrated that Csf1r haploinsufficiency impairs synaptic function in addition to associated impairment of spatial and cognitive memory impairments in the Csf1r+/− ALSP model mice.
Csf1r haploinsufficiency results in an inflammatory and phagocytic microglial phenotype in vivo and in vitro
Whole transcriptome RNA sequencing in forebrain tissue from Csf1r+/+ or Csf1r+/− mice was performed to further explore the pathogenic mechanisms related to Csf1r haploinsufficiency. High-confidence differentially expressed genes (DEGs) from the two groups were examined by heatmap visualization (Fig. 2A, Additional file 3: Table S3) followed by Gene Ontology (GO) and KEGG analyses (Fig. 2B). The top ten KEGG pathways, classified by log2 (P value), were significantly enriched in genes related to calcium signaling pathway, cell junction-like tight junctions, and focal adhesion pathways. Additionally, gene set enrichment analysis (GSEA) showed noteworthy enrichment in phagosome pathway (Fig. 2C, genes listed in Additional file 4: Table S4) and toll-like receptor pathway (Fig. 2D, genes listed in Additional file 5: Table S5). These GSEA results showed that CSF1R haploinsufficiency leads to significant upregulation of phagosome-related genes (see heatmap with Z-score in Additional file 7: Fig. S3A), but down-regulation of the genes associated with toll-like receptor pathway (see heatmap with Z-score in Additional file 7: Fig. S3B), which indicates that CSF1R haploinsufficiency may affect microglial dyshomeostasis in the brain.
To further accurately describe the dyshomeostatic state of microglia in ALSP, the morphology and activation of Csf1r+/+ or Csf1r+/− microglia were then observed in vitro and in vivo. Microglial activation is accompanied by switching from a ramified to an amoeboid-like morphology with an enlarged cell body and retracted processes [31]. We first observed the morphology changes by assessing the soma size of primary cultured Csf1r+/− microglia shown by Iba1 staining (Fig. 3A). We found that Csf1r+/− microglia exhibited an amoeboid-like morphology with increased soma size (Fig. 3A, B). We also examined the expression of CD68, a lysosomal protein that indicates the phagocytic state of microglia. Notably, the number of Iba1 and CD68 double-positive cells (Iba1+CD68+) in Csf1r+/− microglia was increased compared to that population in Csf1r+/+ microglia (Fig. 3A, C). Furthermore, to confirm these results, the morphology and activation of microglia in Csf1r+/+ or Csf1r+/− mouse brains were also investigated. A significant reduction in branch crossings was observed in male Csf1r+/− mouse brains compared to age-matched Csf1r+/+ controls (Fig. 3D, E), which indicated that Csf1r deficiency resulted in retracted microglial processes. Simultaneously, the Iba1+CD68+ cell number was substantially increased in brain sections from Csf1r+/− male mice when compared to those in control littermates (Fig. 3D–F). Thus, Csf1r+/− microglia exhibited an amoeboid morphology with a phagocytic state both in vitro and in vivo (Fig. 3A–F).
The inflammatory phenotype was also evaluated in Csf1r+/− microglia by measuring the production of inflammatory factors. We first evaluated the mRNA levels of IL-1β and TNF-α in Csf1r+/+ or Csf1r+/− microglia. In the Csf1r+/− mouse brain samples, Il-1β mRNA levels were significantly higher, and Tnf-α trended non-significantly higher, than that in WT littermates (Additional file 7: Fig. S4A), while both were significantly elevated in cultured primary microglia from Csf1r+/− brains compared to Csf1r+/+ primary microglia (Additional file 7: Fig. S4B). To further validate the inflammation production, single-molecule assays to detect IL-1β and TNF-α levels confirmed that the production of both proteins was increased in primary Csf1r+/− microglia and forebrain samples of Csf1r+/− mice compared to that in their Csf1r+/+ littermates (Fig. 3G–H).
We next examined the phagocytic capacity of Csf1r+/− microglia compared to Csf1r+/+ controls. Although Csf1r haploinsufficiency did not affect the phagocytosis of microsphere beads (Additional file 7: Fig. S5A-B), we observed significantly increased phagocytic uptake of labeled myelin sheaths in Csf1r+/− microglia (Fig. 3I, J) and an increased mean pHrodo fluorescent area per cell (Fig. 3K) in Csf1r+/− microglia compared to those in Csf1r+/+ microglia, indicating that this enhancement in microglial phagocytic function appears to be myelin-specific.
These results collectively indicated that Csf1r haploinsufficiency leads to a pro-inflammatory and phagocytic activation state of microglia.
Minocycline inhibits partially the activation of Csf1r haploinsufficient microglia in vivo and in vitro
The "microglia inhibitor", minocycline, has been reported to confer potential immunotherapeutic effects in several neurodegenerative diseases [13, 16, 32–35]. We next examined whether minocycline could effectively reverse the activation phenotypes of microglia in our model of ALSP. Indeed, minocycline exposure caused an increase in branch crossings and a significant reduction in the number of Iba1+CD68+ cells in Csf1r+/− primary microglia compared with untreated Csf1r+/− controls (Fig. 4A–C). Furthermore, minocycline treatment could partially inhibit microglial activation in forebrain sections of Csf1r+/− mice, with the large majority of cells displaying a relatively resting morphology, increased arborization of the processes, and decreased Iba1+CD68+ cell populations (Fig. 4D–F). Relative expression analysis by qPCR showed that Tnf-α and Il-1β transcription was significantly decreased or in a trend of reduction in Csf1r+/− microglia treated with minocycline compared to untreated controls, both in vivo and in vitro (Additional file 7: Fig. S6A, B). Furthermore, IL-1β and TNF-α protein levels were also significantly reduced in Csf1r+/− mice and Csf1r+/− microglia treated with minocycline compared with their respective Csf1r+/− placebo-treated controls (Fig. 4G, H), which together indicated that pro-inflammatory cytokine production was reduced in response to minocycline. These results suggested that the pro-inflammatory activation of Csf1r+/− microglia was inhibited by minocycline both in vitro and in vivo.
Minocycline can partially rescue the behavioral deficits of Csf1r+/− mice
Previous studies have provided evidence demonstrating that ALSP is a primary microgliopathy [11]. Given the abnormal microglial activation in Csf1r+/− mice and the effective microglial inhibition by minocycline, we then sought to determine whether inhibiting microglial activation by minocycline could reverse the behavioral and pathological deficits displayed in the Csf1r+/− mouse model of ALSP. Assessment of cognitive and emotional function in Csf1r+/− mice by T-maze and light–dark transition test, respectively, showed that these functions were significantly restored in Csf1r+/− treated with minocycline (Fig. 5A–C), although not to levels displayed by WT Csf1r+/+ littermates. These results suggested that minocycline could improve the behavioral deficits associated with Csf1r+/− heterozygosity in ALSP model mice.
Minocycline reduces demyelination and restores synaptic density in Csf1r haploinsufficient mouse brain
Callosal atrophy has been observed in brain tissue of humans with ALSP and demyelination is a hallmark of the Csf1r haploinsufficiency in mouse brain. We therefore investigated the effects and mechanisms by which minocycline alleviated the pathological characteristics of ALSP in Csf1r+/− male mice. Similar to the effects on microglial activation observed above, demyelination was significantly improved in forebrain sections of minocycline-treated Csf1r+/− mice compared to that in the saline-treated Csf1r+/− control mice (Fig. 6A–E). Moreover, levels of the myelin marker, MBP, were higher in forebrain samples of Csf1r+/− mice treated with minocycline compared to that in the saline control group (Fig. 6F–G). Further examination of phagocytic capacity as a potential mechanism contributing to the therapeutic effects of minocycline indicated that microglial engulfment of myelin sheaths was lower in primary Csf1r+/− microglia treated with minocycline than that in the Csf1r+/− saline-treated control cells (Fig. 6H–J).
Previous reports indicate that minocycline also affects microglial engulfment of synapses [36]. We found that synapse density was significantly lower in male mice Csf1r haploinsufficiency compared to that in their WT littermates, which could be partially rescued by minocycline administration in Csf1r+/− male mice in vivo (Fig. 7A, B). Furthermore, synaptic protein levels of PSD95 (postsynaptic protein) and VGLUT1 (presynaptic protein), which were decreased in forebrain sections of Csf1r+/− mice, were restored (though not significantly in VGLUT1) in response to minocycline, albeit at still lower levels than that in WT littermates (Fig. 7C–E), which was consistent with our observations of improved synapse density. These cumulative results suggested that minocycline could improve the impaired pathological phenotype of Csf1r+/− mouse brain.
Minocycline regulates cellular metabolism and organization in brains of Csf1r haploinsufficient mice
To further examine the possible mechanisms by which minocycline exposure led to beneficial therapeutic effects on behavioral and pathological deficits of Csf1r+/− ALSP model mice, we collected cerebral samples from Csf1r+/+ or Csf1r+/− male mice treated or not with minocycline for RNA-seq analysis. Weighted gene co-expression network analysis (WGCNA) identified a set of core modules and central genes associated with minocycline treatment, and hierarchical clustering and with dynamic tree clipping (Fig. 8A) identified a single module (brown) that was highly correlated with changes in pathological severity following minocycline treatment. GO enrichment analysis exploring the functional annotation of genes in this module intriguingly showed enrichment in biological processes associated with ‘cellular metabolic process’ and ‘cellular component organization or localization’ (Fig. 8B; see Additional file 6: Table S6 for a complete list of gene clusters), suggesting a potentially protective role for minocycline in mitigating the pathological ALSP phenotype via regulation of cellular metabolism and cellular organization in microglia.
Discussion
A recent study has suggested that CSF1R heterozygosity in microglia is sufficient to induce pathogenesis in ALSP [11]. CSF1R-related leukoencephalopathy is therefore considered a primary microgliopathy of the central nervous system (CNS). The effects of losing one Csf1r allele or mutation of Csf1r have been thoroughly documented in previous studies using similar experimental approaches in mouse, rat, or zebrafish models. However, the underlying molecular mechanisms by which CSF1R deficiency leads to neurodegeneration has remained unclear and effective therapeutic strategies are still lacking in clinic.
In this study, we demonstrated that CSF1R deficiency results in abnormal microglial activation, which is critical for the pathogenesis of ALSP. This finding is consistent with recent studies in human post-mortem brain tissues [37] and in Csf1r+/− mice [11, 38] that showed CSF1R-dependent leukoencephalopathy is mediated by the activation of microglia. Importantly, findings in this study indicate that modulating microglial activation with the microglial inhibitor, minocycline, can partially restore the behavioral and pathological deficits characteristic of Csf1r+/− ALSP mice (Fig. 9).
Intriguingly, several studies have reported finding microglial dyshomeostasis in human ALSP patients [37, 39]. For instance, one study showed that increased CD68 immunoreactivity mainly occurs in the superficial cerebral white matter of HDLS patients [37]. Another study revealed that microglia in the cerebral white matter have a dyshomeostatic phenotype in HDLS [37]. Additionally, observations of increased microglial activation has been reported in brain samples of adult Csf1r+/− and Csf1rE631K/+ mice [40], as well as CSF1R-mutant human brains [10, 29, 41, 42]. Consistent with these reports, we found that Csf1r haploinsufficient microglia have increased proportions of Iba1+CD68+ cells with dramatically activated morphological features in our ALSP mouse model. Furthermore, microgliosis has also been observed in Csf1r+/− mice and mice with microglial depletion (MCsf1rhet) [10, 11, 38]. By contrast, heterozygous Csf1r knockout rats had no detectable pathological brain phenotype nor elevated microglial densities [43], which may be a premature conclusion stemming from a small sample size (n = 5) of Csf1r+/− rats [29]. However, decreased microglial density has also been reported in adult mice with inducible Csf1r+/− heterozygosity [12], Csf1rE631K/+ mice [40], and Csf1r mutant zebrafish [44]. Multiple studies have shown that microglial abundance is reduced in Csf1r haploinsufficient animal models and CSF1R-associated ALSP patients [10, 30, 43]. Consistent with these previous studies, immunofluorescent staining for Iba1 in the current study confirmed that microglia density is indeed decreased in the cortex and hippocampus of Csf1r+/− mice (Additional file 7: Fig. S7). Collectively, these studies suggest that microglial dyshomeostasis induced by loss of one Csf1r allele can serve as a key driver of ALSP pathogenesis. Nevertheless, the molecular mechanisms responsible for the abnormal Csf1r+/− microglial morphology and function require further verification.
Notably, in this study, Csf1r haploinsufficient microglia also showed functional changes, including enhanced production of pro-inflammatory factors and enhanced phagocytosis of myelin sheaths, whereas other studies have reported that Csf1r+/− microglia show an oxidative rather than not pro-inflammatory phenotype [38]. GSEA analysis showed noteworthy enrichment for genes related to the phagosome pathway and toll-like receptor pathway in adult Csf1r+/− brains, further supporting the increased phagocytosis of myelin in ALSP. Nevertheless, these apparent disparities among observations of an inflammatory microglial state associated with CSF1R deficiency indicate the need for further investigation. Deletion of the fms-intronic regulatory element (FIRE), a super-enhancer in the second intron of Csf1r, leads to complete loss of brain microglia and resident tissue macrophages [45]. However, the FIRE mutation has no impact on the morphology or phagocytosis of Csf1rΔFIRE/ΔFIRE RAW 264.7 macrophage cells [45]. By contrast, CSF1R haploinsufficiency has been shown to decrease the phagocytosis capacity of beads or amyloid-β in peripheral macrophages, but not microglia, isolated from Csf1rflx/wt; Cx3cr1Cre/+ mice [46]. Our study shows that primary Csf1r+/− microglia displayed no obvious changes in phagocytic capacity in response to beads, but exhibit enhanced phagocytosis in response to myelin sheaths, suggesting that Csf1r+/− leads to microglia-specific changes in phagocytic capacity. We have previously reported that expression of Trem2, a crucial gene for cell movement and phagocytosis, is significantly increased in Csf1r knockdown microglia [19]. Based on patterns of gene expression observed in the Csf1r+/− mouse brain, it is possible that C1q, a crucial phagocytic signal in synapses, may be responsible for the enhanced myelin engulfment. Additionally, our recent findings suggest that CSF1R interacts with TREM2 to synergistically regulate microglial survival, while TREM2 modulates microglial migration and phagocytosis via the FAK/Cdc42 signaling pathway [47]. Another recent study reported that activated microglia can drive demyelination directly via CSF1R signaling [48]. Thus, further research is warranted to determine whether TREM2 or C1q are also involved in the phagocytic capacity of Csf1r+/− microglia.
Abnormal astrocytic phenotypes and astrocytic endocytosis, which are sufficient to cause leukodystrophy, have been also observed in Csf1raV614M/+ zebrafish [44]. Another study showed that GFAP immunoreactivity was reduced in 7-week-old Csf1rE631K/+ mice but was not altered in 43-week-old Csf1rE631K/+ mice [40]. However, it should be noted that immunofluorescent staining of GFAP showed increased levels in brain sections of 9-month-old Csf1r+/− mice in this study (Additional file 7: Fig. S8). Therefore, we cannot exclude the possibility that astrocytes may also contribute to the pathogenesis of ALSP.
Although microglia replacement therapies have emerged as potentially effective modalities for treating ALSP, clinical trials are still needed [49, 50]. The prominent activation of Csf1r+/− microglia in the brain prompted our investigation of microglial inhibition as a possible approach to reversing ALSP pathogenesis. Accumulating studies have confirmed that minocycline, a second-generation tetracycline antibiotic, can inhibit microglial activation in patients and animal models [20, 34, 35, 51–53]. Minocycline is lipophilic and can easily pass through the blood–brain barrier. However, in this study, even after minocycline treatment, the number of processes and the expression of CD68 were not restored to levels comparable with WT control animals, although improved from that in untreated controls. This finding might be related to incomplete transport of the drug through the blood–brain barrier. Hypometabolism detected by [18F]-fluorodeoxyglucose PET has been reported in frontoparietal regions of ALSP patients [1, 3, 54]. In this study, ‘cellular metabolic process’ and ‘cellular component organization or localization’ were both enriched pathways in the minocycline treatment group. Thus, further investigation of the specific cellular metabolic process involved in the pathological progress of ALSP is warranted in future studies.
These collective studies indicate that microglial activation is a primary cause of CSF1R-associated leukoencephalopathy and inhibiting microglial activation by minocycline may be an effective strategy to improve behavioral performance, based on our findings in our mouse model of ALSP. Our study also reveals myelin engulfment and inflammatory response as two molecular mechanisms through which CSF1R deficiency-mediated microglial activation leads to ALSP-associated pathologies. This study thus helps unravel the pathological function of CSF1R deficiency in ALSP and provides therapeutic targets for alleviating microglial dysfunction associated with leukoencephalopathy.
Conclusions
This study provides the first report of which we are aware showing that Csf1r haploinsufficiency results in early impaired synaptic plasticity, as evaluated by LTP assay and demonstrates the aberrant activation of microglia in Csf1r+/− mice and Csf1r+/− primary microglia. Notably, this study also provides a strong therapeutic basis for developing minocycline as a modulator of microglial homeostasis for patients with CSF1R variants at high risk of ALSP pathogenesis.
Supplementary Information
Acknowledgements
The authors thank Luming Yao and Caiming Wu from the Core Facility of Biomedical Sciences of Xiamen University for their professional help in TEM preparation and analysis. The authors also thank Jingru Huang from the Core Facility of Biomedical Sciences of Xiamen University for the professional help in confocal image capture.
Abbreviations
- ALSP
Adult-onset leukoencephalopathy with axonal spheroids and pigmented glia
- CSF1R
Colony-stimulating factor 1 receptor
- LTP
Long-term potentiation
- POLD
Pigmented orthochromatic leukodystrophy
- HDLS
Hereditary diffuse leukoencephalopathy with axonal spheroids
- AD
Alzheimer’s disease
- ALS
Amyotrophic lateral sclerosis
- PD
Parkinson’s disease
- FTD
Frontal temporal dementia
- TEM
Transmission electron microscopy
Author contributions
HZ and ZW contributed to the conception and design of the study. Material preparation, data collection and analysis were performed by XL, BH, ZW and XG. YZ provided substantial help in the detection of IL-1β and TNF-α protein levels. The first draft of the manuscript was written by HZ and XL. All authors commented on previous versions of the manuscript. All authors read and approved the final manuscript. XW, JZ and YL contributed unpublished reagents/analytic tools. All authors read and approved the final manuscript.
Funding
This work was supported by grants from the National Natural Science Foundation of China (82271219 and 91949129 to H.Z., 82071195 to Y.L, U1705285 to Y-W.Z.) and the Natural Science Foundation of Fujian Province (No. 2020J01014 to H.Z).
Availability of data and materials
All datasets generated during the current study are available from the corresponding author on reasonable request.
Declarations
Ethics approval and consent to participate
All animal procedures were in strict compliance with the National Institutes of Health Guidelines for the Care and Use of Laboratory Animals and were approved by the Animal Ethics Committee of Xiamen University.
Consent for publication
All authors approved this manuscript and provided consent for publication.
Competing interests
The authors declare no conflicts of interest or financial interests.
Footnotes
Publisher's Note
Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Xin Li, Banglian Hu, Xiaoyan Guan and Ziwei Wang contributed equally to this work
Contributor Information
Zhanxiang Wang, Email: wangzx@xmu.edu.cn.
Honghua Zheng, Email: honghua@xmu.edu.cn.
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Data Availability Statement
All datasets generated during the current study are available from the corresponding author on reasonable request.