The title compound is a phthalimide-protected polyamine with a protonated central nitrogen atom. The crystal packing features a hydrogen-bond network, a two-coordinated chloride ion, and off-set π–π stacking.
Keywords: crystal structure, phthalimides, π–π interactions, tripodal ligand
Abstract
The title compound {systematic name: bis[2-(1,3-dioxoisoindol-2-yl)ethyl]azanium chloride dihydrate}, C20H18N3O4 +·Cl−·2H2O, is a phthalimide-protected polyamine that was synthesized by a previous method. It was characterized by ESI–MS, 1H NMR, and FT–IR. Crystals were grown from a solution of H2O and 0.1 M HCl. The central nitrogen atom is protonated and forms hydrogen bonds with the chloride ion and a water molecule. The two phthalimide units make a dihedral angle of 22.07 (3)°. The crystal packing features a hydrogen-bond network, two-coordinated chloride, and off-set π–π stacking.
1. Chemical context
The title compound was synthesized by Frederick Mann in 1934 (Mann, 1934 ▸). It has been a key component for the synthesis of tripodal amines (Lundin et al., 2004 ▸; Blackman, 2005 ▸), Schiff base macrocycles (Keypour et al., 2008 ▸), MRI contrast agents of gadolinium(III) (Cheng et al., 2000 ▸), and as a tricyclic host for anions (Kang et al., 2010 ▸). Recently, it has also been used to functionalize graphene oxide (Ramesh & Jebasingh, 2019 ▸), build a nano-polymer dendrimer to uptake salicylic acid (Arshadi et al., 2019 ▸), and construct a fluorescent ligand (Saga et al., 2020 ▸). The compound itself has formed a complex with manganese as a superoxide dismutase mimetic (Piacham et al., 2014 ▸). A variety of phthalimide compounds have been of interest because of the variety of supramolecular interactions that can exist (Howell et al., 2003 ▸).
2. Structural commentary
The molecular structure of the title compound is shown in Fig. 1 ▸. The compound is a protonated polyamine with two phthalimide groups protecting the terminal nitrogens. It crystallizes in the monoclinic space group P21/c. The planes of the two phthalimide units (N1/C1–C8 and N3/C13–C20) make a dihedral angle of 22.07 (3)°. These units point in opposite directions to each other from the perspective of the central nitrogen atom. The central tetrahedral nitrogen atom (NH2) forms hydrogen bonds with a water molecule and the chloride ion.
Figure 1.
The molecular structure of the title compound, showing 50% probability ellipsoids.
3. Supramolecular features
The crystal structure features off-set π–π stacking between phthalimide groups running along the b-axis direction (Fig. 2 ▸). The Cg (N1/C1–C8)⋯Cg (N3/C13–C20) centroid–centroid distance is 4.0143 (7) Å. A hydrogen-bond network (Table 1 ▸) exists between the protonated amine (N2—H2A), a water molecule (O1W), and a second water molecule (O2W). Both water molecules (O1W—H1WB, O2W—H2WA) also form hydrogen bonds with phthalimide oxygen atoms (O4, O2). The chloride ions form two hydrogen bonds with the protonated amine and a water molecule.
Figure 2.
Molecular packing of the title compound showing π–π interactions, hydrogen bonding, and chloride coordination.
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N2—H2A⋯O1W | 0.930 (17) | 1.848 (17) | 2.7729 (16) | 172.7 (14) |
| O1W—H1WA⋯O2W | 0.87 | 1.88 | 2.7462 (15) | 171 |
| O1W—H1WB⋯O4i | 0.87 | 2.05 | 2.9054 (14) | 168 |
| O2W—H2WA⋯O2ii | 0.87 | 2.03 | 2.8929 (15) | 172 |
Symmetry codes: (i)
; (ii)
.
4. Database survey
A search of the Cambridge Structural Database (version 5.41, update of July 2022; Groom et al., 2016 ▸) for related compounds with a phthalimide unit gave 2881 hits. A search for the skeletal structure of N(CH2CH2NH2)2 resulted in 1707 hits, while the structure with protonated amines +HN(CH2CH2NH3 +)2 resulted in 182 hits. One of these structures is the triprotonated diethylenetriamine trichloride (ETACLA01; Ilioudis et al., 2000 ▸). This structure includes one chloride ion that is two-coordinate and two chlorides that are three-coordinate. A search for an amine with two phthalimide groups had 24 hits. The structure of a diphthalimidodiethylammonium and hydrogen phthalate complex showed stabilization by offset π–π stacking, carbonyl–carbonyl, and hydrogen-bonding interactions (REVZAT; Barrett et al., 1995 ▸). Hydrogen bonding occurs within the complex unit and connects adjacent units. The offset π–π stacking between phthalimide units is characterized by C⋯C distances ranging from 3.297–3.592 Å. We have previously reported a phthalimide-protected polyamine that exhibits offset π–π stacking (Holmberg et al., 2021 ▸).
5. Synthesis and crystallization
Following a previous protocol (Utz et al., 2008 ▸), 5.0 mL (48 mmol) of diethylenetriamine were dissolved in 50 mL of methanol. To this, 15.0 g (101 mmol) of phthalic anhydride were slowly added, which turned the solution clear and yellow. The solution was kept at 333 K with minimal fluctuations and stirred for approximately 45 min. The solution became cloudy. It was removed from heat and stirred at room temperature for 7 days. A Büchner funnel and filter paper were saturated with MeOH, and the round-bottom flask was rinsed with MeOH prior to vacuum filtration. The precipitate was a pale-yellow solid. It was rinsed four times with 25 mL of MeOH and 4 × 25 mL of acetone to give 9.609 g of the product (55% yield). Characterization results align with previous work. ESI–MS: m/z = 364.1 (M + H+), 386.1 (M + Na+). 1H NMR (90 MHz, CDCl3) δ ppm 7.75 (m, 8H, aromatics), 3.75 (t, 4H, CH2—N), 3.0 (t, 4H, CH2—N), 1.60 (s, 1H, N—H). FTIR (cm−1) = 3326 ν(N—H), 1698 ν(C=O). Crystals suitable for X-ray crystallography were grown by evaporation, with the compound dissolved in a solution of H2O and 0.1 M HCl.
6. Refinement
Crystal data, data collection and structure refinement details are summarized in Table 2 ▸. N-bound H atoms were refined with U iso(H) = 1.2U eq(N). C-bound and water H atoms were positioned geometrically (C—H = 0.96–0.99 Å, O—H = 0.87 Å) and refined as riding with U iso(H) = 1.2–1.5U eq(C, O).
Table 2. Experimental details.
| Crystal data | |
| Chemical formula | C20H18N3O4 +·Cl−·2H2O |
| M r | 435.85 |
| Crystal system, space group | Monoclinic, P21/c |
| Temperature (K) | 100 |
| a, b, c (Å) | 12.0401 (6), 15.4829 (7), 11.2543 (6) |
| β (°) | 105.7191 (17) |
| V (Å3) | 2019.52 (17) |
| Z | 4 |
| Radiation type | Mo Kα |
| μ (mm−1) | 0.23 |
| Crystal size (mm) | 0.18 × 0.18 × 0.05 |
| Data collection | |
| Diffractometer | Bruker SMART APEXII area detector |
| Absorption correction | Multi-scan (SADABS; Krause et al., 2015 ▸) |
| T min, T max | 0.666, 0.744 |
| No. of measured, independent and observed [I > 2σ(I)] reflections | 59713, 4126, 3430 |
| R int | 0.082 |
| (sin θ/λ)max (Å−1) | 0.625 |
| Refinement | |
| R[F 2 > 2σ(F 2)], wR(F 2), S | 0.031, 0.077, 1.03 |
| No. of reflections | 4126 |
| No. of parameters | 284 |
| H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
| Δρmax, Δρmin (e Å−3) | 0.33, −0.23 |
Supplementary Material
Crystal structure: contains datablock(s) I. DOI: 10.1107/S2056989023004565/ex2070sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989023004565/ex2070Isup2.hkl
Supporting information file. DOI: 10.1107/S2056989023004565/ex2070Isup3.mol
Supporting information file. DOI: 10.1107/S2056989023004565/ex2070Isup4.cml
CCDC reference: 2264952
Additional supporting information: crystallographic information; 3D view; checkCIF report
Acknowledgments
The authors acknowledge Dr Christal Sohl (San Diego State University) for support and Dr Greg Elliott (San Diego State University) for mass spectrometry.
supplementary crystallographic information
Crystal data
| C20H18N3O4+·Cl−·2H2O | F(000) = 912 |
| Mr = 435.85 | Dx = 1.434 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| a = 12.0401 (6) Å | Cell parameters from 8573 reflections |
| b = 15.4829 (7) Å | θ = 2.6–26.6° |
| c = 11.2543 (6) Å | µ = 0.23 mm−1 |
| β = 105.7191 (17)° | T = 100 K |
| V = 2019.52 (17) Å3 | Plate, colourless |
| Z = 4 | 0.18 × 0.18 × 0.05 mm |
Data collection
| Bruker SMART APEXII area detector diffractometer | 4126 independent reflections |
| Radiation source: Micro Focus Rotating Anode, Bruker TXS | 3430 reflections with I > 2σ(I) |
| Double Bounce Multilayer Mirrors monochromator | Rint = 0.082 |
| Detector resolution: 7.407 pixels mm-1 | θmax = 26.4°, θmin = 2.6° |
| ω and φ scans | h = −15→15 |
| Absorption correction: multi-scan (SADABS; Krause et al., 2015) | k = −19→19 |
| Tmin = 0.666, Tmax = 0.744 | l = −14→14 |
| 59713 measured reflections |
Refinement
| Refinement on F2 | Hydrogen site location: mixed |
| Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
| R[F2 > 2σ(F2)] = 0.031 | w = 1/[σ2(Fo2) + (0.0289P)2 + 1.0135P] where P = (Fo2 + 2Fc2)/3 |
| wR(F2) = 0.077 | (Δ/σ)max < 0.001 |
| S = 1.03 | Δρmax = 0.33 e Å−3 |
| 4126 reflections | Δρmin = −0.22 e Å−3 |
| 284 parameters | Extinction correction: SHELXL-2019/1 (Sheldrick 2015b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| 0 restraints | Extinction coefficient: 0.0027 (5) |
| Primary atom site location: dual |
Special details
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| Cl1 | 0.30610 (3) | 0.21490 (2) | 0.23479 (3) | 0.01891 (10) | |
| O1 | 0.45753 (9) | 0.41672 (7) | 0.37854 (9) | 0.0222 (2) | |
| O2 | 0.18461 (8) | 0.47720 (6) | 0.01946 (9) | 0.0188 (2) | |
| O3 | 0.66232 (8) | 0.16482 (7) | 0.41798 (9) | 0.0192 (2) | |
| O4 | 0.77243 (9) | 0.14778 (7) | 0.06066 (9) | 0.0203 (2) | |
| N1 | 0.34112 (10) | 0.44489 (7) | 0.18374 (11) | 0.0145 (3) | |
| N2 | 0.49938 (11) | 0.29689 (7) | 0.14298 (11) | 0.0132 (2) | |
| H2A | 0.5674 (14) | 0.3152 (10) | 0.1984 (15) | 0.016* | |
| H2B | 0.4486 (14) | 0.2814 (10) | 0.1872 (15) | 0.016* | |
| N3 | 0.68861 (10) | 0.15627 (7) | 0.22242 (11) | 0.0144 (3) | |
| C1 | 0.36218 (13) | 0.42849 (9) | 0.31025 (13) | 0.0168 (3) | |
| C2 | 0.24799 (13) | 0.43156 (9) | 0.33647 (13) | 0.0172 (3) | |
| C3 | 0.21870 (14) | 0.41977 (10) | 0.44585 (14) | 0.0232 (3) | |
| H3 | 0.275327 | 0.407303 | 0.520828 | 0.028* | |
| C4 | 0.10228 (15) | 0.42703 (10) | 0.44106 (15) | 0.0264 (4) | |
| H4 | 0.078868 | 0.418693 | 0.514353 | 0.032* | |
| C5 | 0.01953 (14) | 0.44615 (10) | 0.33171 (16) | 0.0254 (4) | |
| H5 | −0.059106 | 0.450841 | 0.331866 | 0.030* | |
| C6 | 0.04974 (13) | 0.45861 (9) | 0.22169 (15) | 0.0208 (3) | |
| H6 | −0.006455 | 0.471957 | 0.146751 | 0.025* | |
| C7 | 0.16529 (13) | 0.45060 (9) | 0.22689 (13) | 0.0165 (3) | |
| C8 | 0.22447 (12) | 0.45952 (9) | 0.12767 (13) | 0.0146 (3) | |
| C9 | 0.43146 (12) | 0.45125 (9) | 0.12044 (13) | 0.0163 (3) | |
| H9A | 0.504935 | 0.466733 | 0.181225 | 0.020* | |
| H9B | 0.411828 | 0.498362 | 0.058814 | 0.020* | |
| C10 | 0.44862 (12) | 0.36834 (9) | 0.05565 (13) | 0.0160 (3) | |
| H10A | 0.373203 | 0.349242 | 0.001902 | 0.019* | |
| H10B | 0.500022 | 0.380153 | 0.002199 | 0.019* | |
| C11 | 0.51826 (12) | 0.21954 (9) | 0.07135 (13) | 0.0147 (3) | |
| H11A | 0.571103 | 0.235377 | 0.021083 | 0.018* | |
| H11B | 0.443688 | 0.202189 | 0.014086 | 0.018* | |
| C12 | 0.56858 (12) | 0.14316 (9) | 0.15283 (13) | 0.0159 (3) | |
| H12A | 0.521779 | 0.132557 | 0.211393 | 0.019* | |
| H12B | 0.563460 | 0.091081 | 0.100582 | 0.019* | |
| C13 | 0.72536 (12) | 0.16741 (9) | 0.35046 (13) | 0.0144 (3) | |
| C14 | 0.85216 (12) | 0.18028 (9) | 0.38127 (13) | 0.0146 (3) | |
| C15 | 0.93036 (12) | 0.19494 (9) | 0.49353 (13) | 0.0173 (3) | |
| H15 | 0.907043 | 0.196796 | 0.567657 | 0.021* | |
| C16 | 1.04548 (13) | 0.20700 (9) | 0.49417 (14) | 0.0196 (3) | |
| H16 | 1.101625 | 0.218356 | 0.569922 | 0.024* | |
| C17 | 1.07905 (12) | 0.20260 (9) | 0.38529 (14) | 0.0192 (3) | |
| H17 | 1.157746 | 0.211544 | 0.387946 | 0.023* | |
| C18 | 0.99976 (12) | 0.18540 (9) | 0.27284 (14) | 0.0176 (3) | |
| H18 | 1.023044 | 0.180774 | 0.198902 | 0.021* | |
| C19 | 0.88563 (12) | 0.17528 (9) | 0.27268 (13) | 0.0152 (3) | |
| C20 | 0.78104 (12) | 0.15836 (9) | 0.16934 (13) | 0.0154 (3) | |
| O1W | 0.70481 (9) | 0.36110 (7) | 0.29278 (9) | 0.0200 (2) | |
| H1WA | 0.715322 | 0.413414 | 0.269788 | 0.030* | |
| H1WB | 0.717563 | 0.364549 | 0.372498 | 0.030* | |
| O2W | 0.72498 (11) | 0.52060 (7) | 0.19391 (11) | 0.0287 (3) | |
| H2WA | 0.758477 | 0.523958 | 0.134596 | 0.043* | |
| H2WB | 0.720782 | 0.573778 | 0.217062 | 0.043* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| Cl1 | 0.01688 (18) | 0.02079 (19) | 0.02101 (19) | −0.00147 (14) | 0.00846 (14) | 0.00137 (14) |
| O1 | 0.0220 (6) | 0.0210 (6) | 0.0211 (6) | 0.0023 (4) | 0.0014 (5) | 0.0030 (4) |
| O2 | 0.0189 (5) | 0.0207 (5) | 0.0168 (5) | 0.0013 (4) | 0.0049 (4) | 0.0020 (4) |
| O3 | 0.0178 (5) | 0.0221 (6) | 0.0205 (5) | 0.0004 (4) | 0.0099 (4) | −0.0007 (4) |
| O4 | 0.0240 (6) | 0.0228 (6) | 0.0151 (5) | 0.0011 (4) | 0.0071 (4) | −0.0004 (4) |
| N1 | 0.0146 (6) | 0.0143 (6) | 0.0160 (6) | 0.0023 (5) | 0.0062 (5) | 0.0014 (5) |
| N2 | 0.0133 (6) | 0.0129 (6) | 0.0139 (6) | 0.0002 (5) | 0.0048 (5) | 0.0006 (5) |
| N3 | 0.0139 (6) | 0.0141 (6) | 0.0157 (6) | 0.0007 (4) | 0.0050 (5) | −0.0005 (5) |
| C1 | 0.0221 (8) | 0.0103 (7) | 0.0180 (7) | 0.0016 (6) | 0.0053 (6) | 0.0001 (5) |
| C2 | 0.0220 (7) | 0.0110 (7) | 0.0197 (7) | 0.0016 (6) | 0.0079 (6) | −0.0008 (5) |
| C3 | 0.0337 (9) | 0.0183 (8) | 0.0201 (8) | 0.0053 (6) | 0.0116 (7) | 0.0020 (6) |
| C4 | 0.0382 (10) | 0.0219 (8) | 0.0270 (9) | 0.0029 (7) | 0.0222 (8) | 0.0011 (7) |
| C5 | 0.0251 (8) | 0.0205 (8) | 0.0372 (9) | 0.0003 (6) | 0.0198 (7) | −0.0021 (7) |
| C6 | 0.0194 (8) | 0.0180 (8) | 0.0266 (8) | 0.0017 (6) | 0.0092 (6) | −0.0016 (6) |
| C7 | 0.0202 (7) | 0.0115 (7) | 0.0198 (7) | 0.0007 (5) | 0.0087 (6) | −0.0006 (6) |
| C8 | 0.0169 (7) | 0.0102 (6) | 0.0170 (7) | 0.0006 (5) | 0.0052 (6) | −0.0016 (5) |
| C9 | 0.0147 (7) | 0.0146 (7) | 0.0218 (8) | 0.0007 (5) | 0.0085 (6) | 0.0024 (6) |
| C10 | 0.0179 (7) | 0.0151 (7) | 0.0160 (7) | 0.0033 (6) | 0.0063 (6) | 0.0043 (6) |
| C11 | 0.0154 (7) | 0.0136 (7) | 0.0154 (7) | 0.0012 (5) | 0.0046 (6) | −0.0014 (5) |
| C12 | 0.0141 (7) | 0.0141 (7) | 0.0190 (7) | −0.0003 (5) | 0.0036 (6) | −0.0003 (6) |
| C13 | 0.0179 (7) | 0.0095 (7) | 0.0168 (7) | 0.0021 (5) | 0.0063 (6) | 0.0004 (5) |
| C14 | 0.0154 (7) | 0.0108 (7) | 0.0187 (7) | 0.0024 (5) | 0.0062 (6) | 0.0009 (5) |
| C15 | 0.0196 (7) | 0.0162 (7) | 0.0169 (7) | 0.0031 (6) | 0.0063 (6) | 0.0001 (6) |
| C16 | 0.0177 (7) | 0.0179 (8) | 0.0216 (8) | 0.0026 (6) | 0.0023 (6) | −0.0003 (6) |
| C17 | 0.0136 (7) | 0.0177 (7) | 0.0270 (8) | 0.0022 (6) | 0.0067 (6) | 0.0027 (6) |
| C18 | 0.0185 (7) | 0.0171 (7) | 0.0199 (7) | 0.0030 (6) | 0.0100 (6) | 0.0031 (6) |
| C19 | 0.0180 (7) | 0.0115 (7) | 0.0167 (7) | 0.0021 (5) | 0.0058 (6) | 0.0018 (5) |
| C20 | 0.0193 (7) | 0.0102 (7) | 0.0185 (8) | 0.0021 (5) | 0.0080 (6) | 0.0017 (5) |
| O1W | 0.0225 (6) | 0.0178 (5) | 0.0183 (5) | −0.0029 (4) | 0.0029 (4) | 0.0011 (4) |
| O2W | 0.0453 (7) | 0.0196 (6) | 0.0285 (6) | 0.0027 (5) | 0.0225 (6) | 0.0041 (5) |
Geometric parameters (Å, º)
| O1—C1 | 1.2099 (17) | C9—H9A | 0.9900 |
| O2—C8 | 1.2131 (17) | C9—H9B | 0.9900 |
| O3—C13 | 1.2115 (17) | C9—C10 | 1.5179 (19) |
| O4—C20 | 1.2103 (17) | C10—H10A | 0.9900 |
| N1—C1 | 1.4001 (18) | C10—H10B | 0.9900 |
| N1—C8 | 1.3936 (18) | C11—H11A | 0.9900 |
| N1—C9 | 1.4561 (18) | C11—H11B | 0.9900 |
| N2—H2A | 0.930 (17) | C11—C12 | 1.5184 (19) |
| N2—H2B | 0.919 (17) | C12—H12A | 0.9900 |
| N2—C10 | 1.4959 (17) | C12—H12B | 0.9900 |
| N2—C11 | 1.4950 (17) | C13—C14 | 1.4845 (19) |
| N3—C12 | 1.4594 (18) | C14—C15 | 1.375 (2) |
| N3—C13 | 1.3988 (18) | C14—C19 | 1.389 (2) |
| N3—C20 | 1.3988 (18) | C15—H15 | 0.9500 |
| C1—C2 | 1.483 (2) | C15—C16 | 1.397 (2) |
| C2—C3 | 1.381 (2) | C16—H16 | 0.9500 |
| C2—C7 | 1.391 (2) | C16—C17 | 1.392 (2) |
| C3—H3 | 0.9500 | C17—H17 | 0.9500 |
| C3—C4 | 1.393 (2) | C17—C18 | 1.389 (2) |
| C4—H4 | 0.9500 | C18—H18 | 0.9500 |
| C4—C5 | 1.389 (2) | C18—C19 | 1.382 (2) |
| C5—H5 | 0.9500 | C19—C20 | 1.488 (2) |
| C5—C6 | 1.395 (2) | O1W—H1WA | 0.8699 |
| C6—H6 | 0.9500 | O1W—H1WB | 0.8699 |
| C6—C7 | 1.382 (2) | O2W—H2WA | 0.8700 |
| C7—C8 | 1.485 (2) | O2W—H2WB | 0.8692 |
| C1—N1—C9 | 123.81 (12) | N2—C10—H10A | 108.9 |
| C8—N1—C1 | 111.88 (11) | N2—C10—H10B | 108.9 |
| C8—N1—C9 | 124.21 (12) | C9—C10—H10A | 108.9 |
| H2A—N2—H2B | 108.2 (13) | C9—C10—H10B | 108.9 |
| C10—N2—H2A | 110.1 (10) | H10A—C10—H10B | 107.7 |
| C10—N2—H2B | 109.6 (10) | N2—C11—H11A | 109.0 |
| C11—N2—H2A | 111.8 (10) | N2—C11—H11B | 109.0 |
| C11—N2—H2B | 107.7 (10) | N2—C11—C12 | 113.10 (11) |
| C11—N2—C10 | 109.44 (11) | H11A—C11—H11B | 107.8 |
| C13—N3—C12 | 124.12 (11) | C12—C11—H11A | 109.0 |
| C13—N3—C20 | 111.77 (11) | C12—C11—H11B | 109.0 |
| C20—N3—C12 | 124.11 (12) | N3—C12—C11 | 113.01 (11) |
| O1—C1—N1 | 123.53 (13) | N3—C12—H12A | 109.0 |
| O1—C1—C2 | 130.53 (14) | N3—C12—H12B | 109.0 |
| N1—C1—C2 | 105.92 (12) | C11—C12—H12A | 109.0 |
| C3—C2—C1 | 130.34 (14) | C11—C12—H12B | 109.0 |
| C3—C2—C7 | 121.60 (14) | H12A—C12—H12B | 107.8 |
| C7—C2—C1 | 108.06 (12) | O3—C13—N3 | 124.40 (13) |
| C2—C3—H3 | 121.6 | O3—C13—C14 | 129.59 (13) |
| C2—C3—C4 | 116.88 (15) | N3—C13—C14 | 105.99 (11) |
| C4—C3—H3 | 121.6 | C15—C14—C13 | 129.93 (13) |
| C3—C4—H4 | 119.2 | C15—C14—C19 | 121.88 (13) |
| C5—C4—C3 | 121.61 (14) | C19—C14—C13 | 108.19 (12) |
| C5—C4—H4 | 119.2 | C14—C15—H15 | 121.4 |
| C4—C5—H5 | 119.4 | C14—C15—C16 | 117.29 (13) |
| C4—C5—C6 | 121.25 (15) | C16—C15—H15 | 121.4 |
| C6—C5—H5 | 119.4 | C15—C16—H16 | 119.6 |
| C5—C6—H6 | 121.6 | C17—C16—C15 | 120.89 (14) |
| C7—C6—C5 | 116.84 (15) | C17—C16—H16 | 119.6 |
| C7—C6—H6 | 121.6 | C16—C17—H17 | 119.3 |
| C2—C7—C8 | 108.21 (12) | C18—C17—C16 | 121.30 (13) |
| C6—C7—C2 | 121.82 (14) | C18—C17—H17 | 119.3 |
| C6—C7—C8 | 129.97 (14) | C17—C18—H18 | 121.3 |
| O2—C8—N1 | 124.57 (13) | C19—C18—C17 | 117.42 (13) |
| O2—C8—C7 | 129.49 (13) | C19—C18—H18 | 121.3 |
| N1—C8—C7 | 105.93 (12) | C14—C19—C20 | 108.16 (12) |
| N1—C9—H9A | 108.9 | C18—C19—C14 | 121.18 (13) |
| N1—C9—H9B | 108.9 | C18—C19—C20 | 130.65 (13) |
| N1—C9—C10 | 113.25 (11) | O4—C20—N3 | 124.62 (13) |
| H9A—C9—H9B | 107.7 | O4—C20—C19 | 129.53 (13) |
| C10—C9—H9A | 108.9 | N3—C20—C19 | 105.85 (11) |
| C10—C9—H9B | 108.9 | H1WA—O1W—H1WB | 104.5 |
| N2—C10—C9 | 113.22 (11) | H2WA—O2W—H2WB | 104.5 |
| O1—C1—C2—C3 | −1.7 (3) | C9—N1—C1—O1 | −1.2 (2) |
| O1—C1—C2—C7 | 177.56 (15) | C9—N1—C1—C2 | 177.37 (12) |
| O3—C13—C14—C15 | −2.0 (2) | C9—N1—C8—O2 | 1.8 (2) |
| O3—C13—C14—C19 | 177.98 (14) | C9—N1—C8—C7 | −177.10 (12) |
| N1—C1—C2—C3 | 179.83 (14) | C10—N2—C11—C12 | −179.36 (11) |
| N1—C1—C2—C7 | −0.86 (15) | C11—N2—C10—C9 | −177.34 (11) |
| N1—C9—C10—N2 | −69.13 (15) | C12—N3—C13—O3 | 2.3 (2) |
| N2—C11—C12—N3 | −70.61 (15) | C12—N3—C13—C14 | −178.85 (12) |
| N3—C13—C14—C15 | 179.24 (14) | C12—N3—C20—O4 | −1.6 (2) |
| N3—C13—C14—C19 | −0.76 (15) | C12—N3—C20—C19 | 178.60 (12) |
| C1—N1—C8—O2 | 178.13 (13) | C13—N3—C12—C11 | 110.75 (14) |
| C1—N1—C8—C7 | −0.76 (15) | C13—N3—C20—O4 | 177.76 (13) |
| C1—N1—C9—C10 | 97.89 (15) | C13—N3—C20—C19 | −1.99 (15) |
| C1—C2—C3—C4 | 179.82 (14) | C13—C14—C15—C16 | −178.35 (13) |
| C1—C2—C7—C6 | −179.45 (13) | C13—C14—C19—C18 | 179.61 (13) |
| C1—C2—C7—C8 | 0.42 (15) | C13—C14—C19—C20 | −0.42 (15) |
| C2—C3—C4—C5 | −0.7 (2) | C14—C15—C16—C17 | −1.2 (2) |
| C2—C7—C8—O2 | −178.64 (14) | C14—C19—C20—O4 | −178.29 (14) |
| C2—C7—C8—N1 | 0.18 (15) | C14—C19—C20—N3 | 1.45 (15) |
| C3—C2—C7—C6 | −0.1 (2) | C15—C14—C19—C18 | −0.4 (2) |
| C3—C2—C7—C8 | 179.80 (13) | C15—C14—C19—C20 | 179.58 (13) |
| C3—C4—C5—C6 | 0.2 (2) | C15—C16—C17—C18 | −0.6 (2) |
| C4—C5—C6—C7 | 0.3 (2) | C16—C17—C18—C19 | 1.8 (2) |
| C5—C6—C7—C2 | −0.4 (2) | C17—C18—C19—C14 | −1.4 (2) |
| C5—C6—C7—C8 | 179.78 (14) | C17—C18—C19—C20 | 178.68 (14) |
| C6—C7—C8—O2 | 1.2 (3) | C18—C19—C20—O4 | 1.7 (3) |
| C6—C7—C8—N1 | −179.96 (14) | C18—C19—C20—N3 | −178.59 (14) |
| C7—C2—C3—C4 | 0.6 (2) | C19—C14—C15—C16 | 1.6 (2) |
| C8—N1—C1—O1 | −177.56 (13) | C20—N3—C12—C11 | −69.92 (16) |
| C8—N1—C1—C2 | 1.01 (15) | C20—N3—C13—O3 | −177.07 (13) |
| C8—N1—C9—C10 | −86.20 (16) | C20—N3—C13—C14 | 1.75 (15) |
Hydrogen-bond geometry (Å, º)
| D—H···A | D—H | H···A | D···A | D—H···A |
| N2—H2A···O1W | 0.930 (17) | 1.848 (17) | 2.7729 (16) | 172.7 (14) |
| O1W—H1WA···O2W | 0.87 | 1.88 | 2.7462 (15) | 171 |
| O1W—H1WB···O4i | 0.87 | 2.05 | 2.9054 (14) | 168 |
| O2W—H2WA···O2ii | 0.87 | 2.03 | 2.8929 (15) | 172 |
Symmetry codes: (i) x, −y+1/2, z+1/2; (ii) −x+1, −y+1, −z.
Funding Statement
Funding for this research was provided by: San Diego Miramar College Department of Chemistry.
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) I. DOI: 10.1107/S2056989023004565/ex2070sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989023004565/ex2070Isup2.hkl
Supporting information file. DOI: 10.1107/S2056989023004565/ex2070Isup3.mol
Supporting information file. DOI: 10.1107/S2056989023004565/ex2070Isup4.cml
CCDC reference: 2264952
Additional supporting information: crystallographic information; 3D view; checkCIF report


