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PLOS One logoLink to PLOS One
. 2023 Jun 16;18(6):e0287383. doi: 10.1371/journal.pone.0287383

Predicted versus CT-derived total lung volume in a general population: The ImaLife study

Hendrik J Wisselink 1, Danielle J D Steerenberg 1, Mieneke Rook 1,2, Gert-Jan Pelgrim 1, Marjolein A Heuvelmans 3,4, Maarten van den Berge 5, Geertruida H de Bock 4, Rozemarijn Vliegenthart 1,6,*
Editor: Eman Sobh7
PMCID: PMC10275439  PMID: 37327210

Abstract

Predicted lung volumes based on the Global Lung Function Initiative (GLI) model are used in pulmonary disease detection and monitoring. It is unknown how well the predicted lung volume corresponds with computed tomography (CT) derived total lung volume (TLV). The aim of this study was to compare the GLI-2021 model predictions of total lung capacity (TLC) with CT-derived TLV. 151 female and 139 male healthy participants (age 45–65 years) were consecutively selected from a Dutch general population cohort, the Imaging in Lifelines (ImaLife) cohort. In ImaLife, all participants underwent low-dose, inspiratory chest CT. TLV was measured by an automated analysis, and compared to predicted TLC based on the GLI-2021 model. Bland-Altman analysis was performed for analysis of systematic bias and range between limits of agreement. To further mimic the GLI-cohort all analyses were repeated in a subset of never-smokers (51% of the cohort). Mean±SD of TLV was 4.7±0.9 L in women and 6.2±1.2 L in men. TLC overestimated TLV, with systematic bias of 1.0 L in women and 1.6 L in men. Range between limits of agreement was 3.2 L for women and 4.2 L for men, indicating high variability. Performing the analysis with never-smokers yielded similar results. In conclusion, in a healthy cohort, predicted TLC substantially overestimates CT-derived TLV, with low precision and accuracy. In a clinical context where an accurate or precise lung volume is required, measurement of lung volume should be considered.

Introduction

Pulmonary conditions are common, with two major diseases—asthma and chronic obstructive pulmonary disease (COPD)—adding up to a global prevalence of 13.1% [1]. For diagnosis and disease monitoring of COPD, several lung volumetric parameters are determined, including the total lung capacity (TLC) [2]. While the diagnosis of COPD is still based on the results of spirometry, the (separately measured) TLC is often of great importance as additional measure.

There are three methods to measure the TLC. If performed at end-tidal volume, the gas dilution method (often performed with helium) and body plethysmography (often called body box), provide the functional residual capacity [2, 3] that can be added to the inspiratory capacity to obtain the TLC [4, 5]. The third method is the use of an inspiratory computed tomography (CT) scan, on which the lungs can be segmented, generally without the conducting airways [68]. This method relies on the assumption that the CT scan is acquired at full inspiration. Gas dilution and body box will mostly have matched results for subjects without air trapping [2]. While a CT scan allows diagnostic evaluation of both airways and parenchyma, the CT-derived total lung volume (TLV) tends to differ slightly from the first two methods, although there is a strong correlation between TLV and gas dilution or body box (r 0.87–0.90) [913]. Which of these three should be considered the reference standard depends on the specific clinical question or research goal [4].

To give a correct interpretation of lung volume measurements with regards to potential disease presence, severity and progress in time, expected values are required for reference [14]. Accurate prediction of TLC is of importance in some clinical applications, such as in lung transplantation where a potential lung donor is matched to a recipient [15, 16]. Recently, the Global Lung Function Initiative (GLI) published a guideline with updated models to predict the median values for several static lung volumes for healthy individuals, among which the TLC [2]. This model was endorsed by the European respiratory society (ERS) [2]. The 2021 TLC model is a generalized additive model of location shape and scale (GAMLSS), which is mathematically similar to a logistic model with age and height as parameters. It also includes a spline term that depends on sex and age. To the best of our knowledge, the GLI-2021 model has not been directly compared to CT-derived lung volume. It is unknown how well the new GLI model corresponds with CT-derived lung volumes.

The GLI models are often applied to clinical non-healthy populations, for instance to provide a baseline estimation at time of diagnosis and for follow-up purposes, expressing measurements as percentage of expected or predicted [17]. This may lead to a mismatch in clinical practice if the goal is to estimate the expected lung volume in a normal healthy person instead of the idealized reference population used by the GLI [18]. The aim of this study was to compare the outcomes of the GLI-2021 model with CT-derived lung volumes in a healthy consecutively selected sample from a Western European general population-based study cohort.

Materials and methods

Participant selection

CT scans in this study were acquired as part of the ongoing ImaLife study. ImaLife is embedded in Lifelines, a population-based cohort study in the northern part of the Netherlands [1921]. Lifelines is a multi-disciplinary prospective population-based cohort study examining—in a unique three-generation design—the health and health-related behaviors of 167,729 persons living in the North of the Netherlands. It employs a broad range of investigative procedures in assessing the biomedical, socio-demographic, behavioral, physical and psychological factors which contribute to the health and disease of the general population, with a special focus on multi-morbidity and complex genetics [19]. In ImaLife, participants from Lifelines aged 45 or older are invited to undergo a low-dose chest CT scan. The institutional ethical review board from the University Medical Center Groningen gave ethical approval for the ImaLife study, and all participants provided written informed consent. The ImaLife study was registered with the Dutch Central Committee on Research Involving Human Subjects (https://www.toetsingonline.nl, NL58592.042.16). For our present study, the aim was to select a sample of 400 participants from the 1421 individuals who were scanned between June and December 2018, by consecutively including 50 women and 50 men per 5-year age group, with an age range of 45–65 years. This was done to achieve an even distribution across age. Participants with incomplete imaging data (n = 3) or missing weight information (n = 5) were replaced by continuing the sampling. Prior to the main analyses of this study, we excluded participants with COPD or self-reported lung disease (n = 110). The main analysis was performed on the 290 healthy participants (cohort H). Additional analyses were performed for the full general population sample (cohort GP, n = 400) and including only healthy never-smokers (cohort HNS, n = 147). A flowchart detailing the selection steps is shown in Fig 1.

Fig 1. Study flow chart.

Fig 1

Flow chart describing the selection of the GP (general population), H (healthy participants), and HNS (healthy never smokers) cohorts from the ImaLife study.

Lifelines parameters

This study uses data from the second assessment round of Lifelines (2014–2018), which includes questionnaire answers, as well as results from a pulmonary function test [19, 20]. The questionnaire data included smoking status, pack-years, and self-reported lung disease. The spirometric data included the Forced Expiratory Volume in 1 second (FEV₁) and Forced Vital Capacity (FVC), which allows determination of the GOLD stage, but this does not allow derivation of the TLC [17]. Participant height and weight were self-reported during the assessment and shortly before the CT scan, respectively. The body mass index (BMI) was computed from body weight and height. For the purposes of the analyses in this study, a participant was considered to be healthy if she/he reported no COPD, emphysema, chronic bronchitis, or asthma. In case of missing data, participants were considered ever-smokers or non-healthy, respectively.

TLC prediction model

For this study, the ERS-endorsed GLI guideline model was used [2]. The GLI model and its predecessors were developed with the use of participants without a history of smoking or lung disease only [2, 22, 23]. The 2021 model equations look like a stratified logistic regression, although the method used to derive these equations is a generalized additive models of location shape and scale (GAMLSS) [2]. The model is based on age and height: exp(-10.1128 +0.1062*ln(age) +2.2259*ln(height) +Mspline) for women and exp(-10.5861 +0.1433*ln(age) +2.3155*ln(height) +Mspline) for men [2]. Because one of the parameters in this model (Mspline) is a variable based on sex and age, a lookup table is required to use this model, which is provided as a supplementary material to the original publication (permanently archived at http://web.archive.org/web/20210629151841/https://erj.ersjournals.com/content/erj/57/3/2000289/DC1/embed/inline-supplementary-material-2.xlsx?download=true).

CT scan data collection

Low-dose CT scans were acquired on a third-generation dual source CT system (Somatom Force, Siemens Healthineers) with a tube potential of 120 kV and a reference current-time product of 20 mAs (median dose-length product for cohort H 58 mGy, range 29–113) [20]. The field of view was 350 mm (with a pitch of 3.0), or, in case of a large body habitus, 400 mm (pitch 2.5). Scans were reconstructed with a slice thickness/increment of 1.0/0.7 mm, yielding approximately isotropic voxels. For this study, the reconstruction with a medium-smooth (Br40) kernel was used. The scans were acquired at inspiration according to clinical standard breath coaching.

Image analysis

Image analysis consisted of a fully automatic extraction of the lung volume from the CT scan. This was performed with the Syngo.Via Pulmo3D package (version VB40A-HF02, Siemens Healthineers), which did not require manual interaction. A trained researcher (DS) checked the segmentation quality. This quality check consisted of confirming all lung parenchyma was included. Lobar segmentation failures were accepted as long as the overall lung volume would be correct. An example of the segmentation result is included in the supplemental materials.

CT scans of cases with a large difference between the GLI model prediction and the CT-derived lung volume, i.e. difference being in the upper and lower 5% extremes, were visually inspected. This visual inspection was performed to ensure acquisition problems (e.g. substantial omission of an apical or caudal section of the lungs) or major pathology (e.g. severe emphysema/fibrosis) were not present and could therefore not bias the lung volume. Technical physicians (HJW and GJP, 4 years of experience in chest CT research/scan evaluation) performed visual review of these 30 cases.

Statistical analyses

The two-sample Kolmogorov–Smirnov test was used to determine whether TLV, weight, and height for women and men are from the same distribution. Differences in age, height, weight, and TLV between women and men were tested with t-tests. Then, linear regression was used to predict TLV stratified by sex, where age, height, and weight were included as parameters. Model performance of the two models was quantified by correlating the predicted model values with the observed values of TLV by using Pearson’s ρ to estimate correlation and R2 to estimate model fit. Then Bland-Altman analyses were performed to evaluate the systematic differences between the estimated values and the observed TLV values. The mean difference was considered as the estimated bias, and the variability is indicated by the difference between the 95% limits of agreement (ΔLoA). Levene’s test was used to test whether the ΔLoA was the same between models and the Wilcoxon rank-sum test was used to test difference between systematic biases. All analyses were stratified by sex. The results of the Bland-Altman analysis were shown in a residual plot, showing the measured volume on one axis and the difference between TLV and TLC on the other axis.

The Bland-Altman analyses were repeated with the original consecutively selected general population sample (cohort GP, n = 400) and with only the healthy never-smokers (cohort HNS), see Fig 1. The cohort HNS was used to further mimic the cohort used for the GLI model [2].

Statistical analysis of derived data was performed with SPSS 26 (IBM). Data visualization and simple computations were done with MATLAB R2022b (Mathworks).

Results

Visual review of cases with a large difference between predicted TLC and measured TLV did not reveal any anomalies substantial enough to warrant exclusion of the participant. Mean participant age was 54 and 53 years for women and men, respectively (Table 1). Mean weight was 74 kg for women and 86 kg for men, and mean height was 1.70 m for women and 1.84 m for men (mean BMI 25.7 kg/m2 for both women and men). The prevalence of (ever) smoking was 58% for women and 55% for men (including missing data in 4 and 5 cases, respectively).

Table 1. Population characteristics stratified by sex.

Variable Women (N = 151) Men (N = 139) p value
Age (years) 54 ± 5.5 53 ± 5.5 0.367
Weight (kg) 74 ± 12 86 ± 11 <0.001
Height (m) 1.70 ± 0.07 1.84 ± 0.07 <0.001
Body-mass index (kg/m2) 25.7 ± 3.9 25.7 ± 2.9 0.857
Smoking status Never: 64 (42%) Never: 63 (45%) N.A.
Past: 62 (41%) Past: 52 (37%)
Current: 21 (14%) Current: 19 (14%)
Missing: 4 (3%) Missing: 5 (4%)
Pack-years (current/past smokers) 7.5 ± 7.2 9.2 ± 8.0 0.176
Emphysema score (% < -950HU) 4.1 ± 3.2 6.3 ± 4.1 <0.001
CT-diagnosed emphysema None (<5%): 103 (68%) None (<5%): 60 (43%) N.A.
Trace (5–15%): 47 (31%) Trace (5–15%): 74 (53%)
Mild (>15%): 1 (1%) Mild (>15%): 5 (4%)
Forced expiratory volume in 1 second (FEV₁, L) 2.9 ± 0.5 4.2 ± 0.6 <0.001
Forced vital capacity (FVC, L) 3.8 ± 0.7 5.3 ± 0.8 <0.001

The plots in Fig 2 show TLV, height, and weight versus age. None of the scatter plots suggest a strong correlation with age.

Fig 2. Explorative scatter plots.

Fig 2

Explorative scatter plots showing age plotted against a) lung volume (measured on CT), b) height, and c) weight. The dotted lines are linear trend lines, determined separately for women (top row, red markers/line) and men (bottom row, blue markers/line).

Observed mean TLV was lower for women than for men: 4.7 L (SD 0.9 L) versus 6.2 L (SD 1.2 L), respectively (p<0.0001). Mean TLC according to the GLI-2021 was 5.7 L for women (SD 0.5 L) and 7.8 L for men (SD 0.7 L). Compared to TLV, the systematic bias of the TLC was 1.0 L for women and 1.6 L for men, indicating on average overestimation of lung volume based on the GLI model. The difference ranged from 0.9 L underestimation to 4.0 L overestimation.

The residual plots in Fig 3 show the results of the Bland-Altman analysis. The difference between the limits of agreement (ΔLoA) was 3.2 L for women and 4.2 L for men, indicating large variability of GLI-model results to TLV.

Fig 3. Residual plots with Bland-Altman analysis stratified by sex.

Fig 3

Dotted lines show limits of agreement, the solid line shows the mean. GLI-2021: Global Lung Function Initiative prediction model; TLC: total lung capacity; TLV: total lung volume.

The correlation plots for the TLC and the TLV are shown in Fig 4. For larger lung volumes, the TLC and TLV were mostly the same, but for smaller lungs there was a progressive difference, with the predicted TLC increasingly overestimating the actual measured lung volume.

Fig 4. Correlation plot of prediction stratified by sex.

Fig 4

The dotted lines are the y = x lines. Dashed lines are linear trend lines. GLI-2021: Global Lung Function Initiative prediction model; TLC: total lung capacity; TLV: total lung volume.

Re-including participants with lung disease or performing a sub-analysis on the healthy never-smokers did not result in significantly different systematic bias or ΔLoA (p = 0.175–0.769). A full population description of the three cohort subgroups (general population sample, healthy participants, and healthy never-smokers) is available in S1 Table. Analysis outcomes for the three cohort subgroups including p-values are shown in S2 Table.

An optimized linear regression model based on the study population (i.e. the healthy participants) resulted in prediction formulae of lung volume for women and men (S1 Equations). The mean difference between the predictions and the TLV was -0.040 L for women and 0.026 L for men, indicating that the rounded parameters fit the data. The linear regression resulted in ΔLoA values of 3.2 L and 3.9 L, compared to the GLI-model a reduction of 1.2% (women), and 6.6% (men). ΔLoA values were not equal between the linear regression and GLI model (p>0.364).

Discussion

This study found a substantial mismatch between the predicted total lung capacity based on the recent GLI model and CT-measured lung volume. The GLI model tended to overestimate the lung volume compared to the actual, measured TLV, by 1.0–1.6 L (24–31%), with larger overestimation in individuals with a lower TLV. The ΔLoA was high (3.2–4.2L), indicating low precision of the GLI model compared to TLV. When restricting the analyses to healthy never-smokers or expanding the analyses to include non-healthy participants, the precision and accuracy did not meaningfully change. This implies a prediction may not be sufficiently accurate or precise in clinical situations where true lung volume matters.

CT is an increasingly important modality in the evaluation of quantitative lung parameters [4]. There are suggestions that CT-derived parameters might be more sensitive than PFT measurements [24, 25]. Others have suggested that CT measurements are more reproducible than a body box [26]. This has led to the argument in a recent review by Bakker et al. that CT-derived parameters can, now or in the future replace some or all of the spirometry-based parameters [4]. The current study adds further evidence for this argument. When considering the difference between the GLI model predictions and actual CT-derived lung volume found in this study, there are several possible explanations.

Firstly, CT is normally acquired in supine position, while spirometry is performed in a sitting position; this in itself leads to a positional difference in lung volume. This is supported by the finding by Yamada et al., who compared supine and standing CT in healthy volunteers, and also reported sitting pulmonary function test measurements [9]. They reported that the mean lung volume measured in a supine position was 9.9% smaller than the mean lung volume measured in a standing position. The (unexplained) difference between standing TLV and sitting TLC was 7.5%. Since the difference between (supine) TLV and (sitting) TLC in the present study was 24–31%, this suggests only a proportion of the systematic bias may be due to the difference in position, but a third to half of the difference is likely due to overestimation by the GLI model. Furthermore, the high variability cannot be explained by positional difference.

Secondly, there are technical differences between CT and spirometry. To compare CT-derived volumes with other types of measurements, it is important to be aware of the intrinsic differences between the body box measurement (or gas dilution) and the measurement on a CT scan. Normally, the CT volume measurement will exclude conducting airways, while the volume of these airways is included for body plethysmography [8]. However, since this difference would be approximately 20 mL (trachea only) up to 60 mL (full bronchial tree), it is not clinically relevant [27, 28]. The lung segmentation might include air pockets that are not actually ventilated (or exclude air pockets that are) due to imaging artifacts. This kind of segmentation issues should be rare in the absence of pathology and was not observed in this study.

Thirdly, pathology may influence the measurements. On one hand, it may be difficult to reach maximal inspiration for patients with restrictive lung disease; on the other hand, there may be hyperinflation in patients with COPD. Garfield et al. compared body plethysmography to CT for a cohort of COPD GOLD 3 and 4 patients [10]. They found the TLV to be 17.3% lower than the measured TLC. As we excluded patients with COPD (based on spirometry) in our study, this did not play a role in the current results.

Despite the differences outlined above, the correlation between measured TLC and TLV is high (r 0.87–0.90), regardless of the TLC measurement method (body box or gas diffusion) [913].

As outlined by Hall et al., the differences in predicted TLC between different models are minor in the age range 45–65. Of the six TLC prediction models spanning this age, four are within 250 mL of each other [2]. In the past decade, most prediction models (including the GLI-2012 and GLI-2021) have complex formulae, e.g. using logistic regressions with model parameters derived from splines in a separate lookup table [2, 23]. Despite this more mathematical approach, the GLI model did not result in a better fit for our study population than our linear regression. The reason is either the difference in population, or a difference in parameter choice. The cohort in this study includes participants with a smoking history and pulmonary pathology, as it is a population cohort. The linear regression includes weight as a parameter, while most other prediction models do not. Both of these differences could lead to a difference in model performance. However, we specifically performed analyses in healthy (i.e. no positive GOLD stages, no reported lung disease) and never-smoking subcohorts, to eliminate possible effects by pulmonary pathology and smoking history.

The main strength of this study is the cohort. As a sample from a population-based cohort, it matches the characteristics of the general population more closely than a hospital sample would. This is for instance important in early disease detection and monitoring and also particularly valuable in the context of lung transplantation donors where size does matter. The difference in age range between the current study population (45–65 years) and a hospital sample can be reasonably expected to be of lesser importance. This is because participants in early disease detection programs and candidates for lung donation tend to be younger than a typical hospital patient. For this study three different population types were used: a general population (cohort GP), healthy subjects (cohort H), and healthy never-smokers (cohort HNS). In general only never-smokers without pulmonary conditions (cohort HNS) have been used to develop prediction formulae [2, 22, 23]. This ignores the reality that a substantial proportion of the population is ever-smoker. Even among never-smokers there may be undiagnosed emphysema as found on CT [29]. The prediction formulae should be regarded as providing expected values for healthy never-smokers and may consequently not be accurately predicting normal values for more general populations.

The assumption that our population matches the GLI-2021 population is both a strength and a limitation of this study. The difference in age range between this study (45–65) and the GLI-2021 population (5–80) is not expected to have a large impact, as the GLI model is reasonably linear in the age range 45–65 years. To mitigate this, a visual review (including fibrosis, emphysema, and incomplete inclusion of lungs on CT) was performed on subjects with a large difference between predicted and measured lung volume. In this review no obvious disease was found. Furthermore, sub-analyses were performed with only never-smokers without pulmonary disease, as well as with the general population sample. These sub-analyses did not yield a meaningfully different variability or systematic bias.

One limitation of this study is the use of the clinical standard breath coaching, which does not completely ensure full inspiration. The breath coaching during spirometry tends to more effectively ensure maximal effort. A further limitation is the lack of external validation for our linear regression model. The same cohort was used for the creation of the model and to test the performance of the model. This limits the generalizability. Combining this limitation with the particular height and weight of the study population, it would be interesting to repeat this study in a country with a different distribution of height and weight. Since the spirometry did not allow derivation of the TLC, it was not possible to compare a measured TLC with a measured TLV.

The current prediction models have a poor performance for lung volume as compared to actual measurements on CT in a general population cohort. Even without external validation (allowing for over-fitting of parameters), our linear regression only yielded a marginal reduction in variability of 1–7%. Combining this with the inherent population spread, as evident from the data reported by Hall et al. [2], it does not seem likely that a model with easily obtainable parameters will be able to predict lung volume with reasonable precision [18]. Future research should evaluate the possibility of machine learning to assist in accurate and precise predictions, which should be tested in populations of different ethnicity. Moreover, future research should be aimed at exploring the potential value of CT derived lung volume and other parameters for lung disease detection and monitoring.

Conclusions and implications

This study found that there is a substantial mismatch between the GLI-predicted TLC and CT-derived TLV. The predicted TLC generally overestimates actual, measured lung volume, and has a high variability compared to TLV. A measurement (CT or otherwise) rather than a prediction should be performed in situations where size matters.

Supporting information

S1 Fig. Syngo.Via Pulmo 3D interface screenshot.

(PNG)

S1 Table. Population characteristics stratified by sex.

Participants were excluded from the HNS (healthy never-smokers) sub-cohort if they reported a smoking history, had self-reported lung disease, were determined by the spirometry to have COPD, or if any of these were missing.

(DOCX)

S2 Table. Outcome comparison.

(DOCX)

S1 Equations. Results of linear regression analysis.

(DOCX)

Data Availability

Lifelines adheres to standards for data availability. Due to ethical restrictions imposed by the Lifelines Scientific Board and the Medical Ethical Committee of the University Medical Center Groningen related to protecting patient privacy, the data are not publicly available. The data catalogue of Lifelines is publicly accessible on https://www.lifelines.nl/researcher/data-and-biobank/$6102/$6104. All international researchers can obtain metadata at the Lifelines research office (research@lifelines.nl), for which a fee is required. The Lifelines system allows access for reproducibility of the study results. For the imaging data, Lifelines or the corresponding author can be contacted to discuss options for access.

Funding Statement

The position of HJW is supported by KNAW grant PSA-SA-BD-01. The current substudy is part of ImaLife. The ImaLife project is funded by an institutional research grant from Siemens Healthineers and by the Ministry of Economic Affairs and Climate (Netherlands) Policy by means of the PPP Allowance made available by the Top Sector Life Sciences & Health to stimulate public-private partnerships. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.

References

  • 1.Hosseini M, Almasi-Hashiani A, Sepidarkish M, Maroufizadeh S. Global prevalence of asthma-COPD overlap (ACO) in the general population: a systematic review and meta-analysis. Respir Res. 2019;20: 1–10. doi: 10.1186/s12931-019-1198-4 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 2.Hall GL, Filipow N, Ruppel G, Okitika T, Thompson B, Kirkby J, et al. Official ERS technical standard: Global Lung Function Initiative reference values for static lung volumes in individuals of European ancestry. Eur Respir J. 2021;57. doi: 10.1183/13993003.00289-2020 [DOI] [PubMed] [Google Scholar]
  • 3.Brown R, Leith D, Enright P. Multiple breath helium dilution measurement of lung volumes in adults. Eur Respir J. 1998;11: 246–255. doi: 10.1183/09031936.98.11010246 [DOI] [PubMed] [Google Scholar]
  • 4.Bakker JT, Klooster K, Vliegenthart R, Slebos D-J. Measuring pulmonary function in COPD using quantitative chest computed tomography analysis. Eur Respir Rev. 2021;30. doi: 10.1183/16000617.0031-2021 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 5.Criée C, Sorichter S, Smith H, Kardos P, Merget R, Heise D, et al. Body plethysmography–its principles and clinical use. Respir Med. 2011;105: 959–971. doi: 10.1016/j.rmed.2011.02.006 [DOI] [PubMed] [Google Scholar]
  • 6.Xu M, Qi S, Yue Y, Teng Y, Xu L, Yao Y, et al. Segmentation of lung parenchyma in CT images using CNN trained with the clustering algorithm generated dataset. Biomed Eng Online. 2019;18: 1–21. doi: 10.1186/s12938-018-0619-9 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 7.Shen M, Tenda ED, McNulty W, Garner J, Robbie H, Luzzi V, et al. Quantitative evaluation of lobar pulmonary function of emphysema patients with endobronchial coils. Respiration. 2019;98: 70–81. doi: 10.1159/000499622 [DOI] [PubMed] [Google Scholar]
  • 8.Matsumoto AJ, Bartholmai BJ, Wylam ME. Comparison of total lung capacity determined by plethysmography with computed tomographic segmentation using CALIPER. J Thorac Imaging. 2017;32: 101–106. doi: 10.1097/RTI.0000000000000249 [DOI] [PubMed] [Google Scholar]
  • 9.Yamada Y, Yamada M, Yokoyama Y, Tanabe A, Matsuoka S, Niijima Y, et al. Differences in lung and lobe volumes between supine and standing positions scanned with conventional and newly developed 320-detector-row upright CT: intra-individual comparison. Respiration. 2020;99: 598–605. doi: 10.1159/000507265 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 10.Garfield JL, Marchetti N, Gaughan JP, Steiner RM, Criner GJ. Total lung capacity by plethysmography and high-resolution computed tomography in COPD. Int J Chron Obstruct Pulmon Dis. 2012;7: 119. doi: 10.2147/COPD.S26419 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 11.Coxson H, Fauerbach PN, Storness-Bliss C, Müller N, Cogswell S, Dillard D, et al. Computed tomography assessment of lung volume changes after bronchial valve treatment. Eur Respir J. 2008;32: 1443–1450. doi: 10.1183/09031936.00056008 [DOI] [PubMed] [Google Scholar]
  • 12.Zaporozhan J, Ley S, Eberhardt R, Weinheimer O, Iliyushenko S, Herth F, et al. Paired inspiratory/expiratory volumetric thin-slice CT scan for emphysema analysis: comparison of different quantitative evaluations and pulmonary function test. Chest. 2005;128: 3212–3220. doi: 10.1378/chest.128.5.3212 [DOI] [PubMed] [Google Scholar]
  • 13.Gierada DS, Hakimian S, Slone RM, Yusen RD. MR analysis of lung volume and thoracic dimensions in patients with emphysema before and after lung volume reduction surgery. Am J Roentgenol. 1998;170: 707–714. doi: 10.2214/ajr.170.3.9490958 [DOI] [PubMed] [Google Scholar]
  • 14.Pellegrino R, Viegi G, Brusasco V, Crapo R, Burgos F, Casaburi R, et al. Interpretative strategies for lung function tests. Eur Respir J. 2005;26: 948–968. doi: 10.1183/09031936.05.00035205 [DOI] [PubMed] [Google Scholar]
  • 15.Ganapathi AM, Mulvihill MS, Englum BR, Speicher PJ, Gulack BC, Osho AA, et al. Transplant size mismatch in restrictive lung disease. Transpl Int. 2017;30: 378–387. doi: 10.1111/tri.12913 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 16.Riddell P, Ma J, Dunne B, Binnie M, Cypel M, Donahoe L, et al. A simplified strategy for donor-recipient size-matching in lung transplant for interstitial lung disease. J Heart Lung Transplant. 2021;40: 1422–1430. doi: 10.1016/j.healun.2021.06.013 [DOI] [PubMed] [Google Scholar]
  • 17.Global strategy for the diagnosis, management, and prevention of chronic obstructive lung disease (2020 report, archived at http://web.archive.org/web/20200311124055/https://goldcopd.org/wp-content/uploads/2019/12/GOLD-2020-FINAL-ver1.2-03Dec19_WMV.pdf). 2020. [DOI] [PubMed]
  • 18.Guillamet RV. Comments and opinions: Predicted total lung capacity equations: A barrier to the definition of safe lung size differences in lung transplantation. J Heart Lung Transplant. 2022. doi: 10.1016/J.HEALUN.2022.03.012 [DOI] [PubMed] [Google Scholar]
  • 19.Scholtens S, Smidt N, Swertz MA, Bakker SJ, Dotinga A, Vonk JM, et al. Cohort Profile: LifeLines, a three-generation cohort study and biobank. Int J Epidemiol. 2015;44: 1172–1180. doi: 10.1093/ije/dyu229 [DOI] [PubMed] [Google Scholar]
  • 20.Xia C, Rook M, Pelgrim GJ, Sidorenkov G, Wisselink HJ, van Bolhuis JN, et al. Early imaging biomarkers of lung cancer, COPD and coronary artery disease in the general population: rationale and design of the ImaLife (Imaging in Lifelines) Study. Eur J Epidemiol. 2020;35: 75–86. doi: 10.1007/s10654-019-00519-0 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 21.Sijtsma A, Rienks J, van der Harst P, Navis G, Rosmalen JGM, Dotinga A. Cohort Profile Update: Lifelines, a three-generation cohort study and biobank. Int J Epidemiol. 2021. doi: 10.1093/ije/dyab257 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 22.Quanjer PH, Tammeling G, Cotes J, Pedersen O, Peslin R, Yernault J. Lung volumes and forced ventilatory flows. Eur Respir J. 1993;6: 5–40. doi: 10.1183/09041950.005s1693 [DOI] [PubMed] [Google Scholar]
  • 23.Quanjer P, Stanojevic S, Cole T, Baur X, Hall G, Culver B, et al. Multi-ethnic reference values for spirometry for the 3-95-yr age range: The global lung function 2012 equations. Eur Respir J. 2012;40: 1324–1343. doi: 10.1183/09031936.00080312 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 24.de Jong PA, Nakano Y, Lequin M, Mayo J, Woods R, Pare P, et al. Progressive damage on high resolution computed tomography despite stable lung function in cystic fibrosis. Eur Respir J. 2004;23: 93–97. doi: 10.1183/09031936.03.00006603 [DOI] [PubMed] [Google Scholar]
  • 25.Koo H-K, Vasilescu DM, Booth S, Hsieh A, Katsamenis OL, Fishbane N, et al. Small airways disease in mild and moderate chronic obstructive pulmonary disease: a cross-sectional study. Lancet Respir Med. 2018;6: 591–602. doi: 10.1016/S2213-2600(18)30196-6 [DOI] [PubMed] [Google Scholar]
  • 26.Brown MS, Kim HJ, Abtin F, Da Costa I, Pais R, Ahmad S, et al. Reproducibility of lung and lobar volume measurements using computed tomography. Acad Radiol. 2010;17: 316–322. doi: 10.1016/j.acra.2009.10.005 [DOI] [PubMed] [Google Scholar]
  • 27.Leader JK, Rogers RM, Fuhrman CR, Sciurba FC, Zheng B, Thompson PF, et al. Size and morphology of the trachea before and after lung volume reduction surgery. Am J Roentgenol. 2004;183: 315–321. doi: 10.2214/ajr.183.2.1830315 [DOI] [PubMed] [Google Scholar]
  • 28.Pu J, Leader JK, Meng X, Whiting B, Wilson D, Sciurba FC, et al. Three-dimensional airway tree architecture and pulmonary function. Acad Radiol. 2012;19: 1395–1401. doi: 10.1016/j.acra.2012.06.007 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 29.Steiger D, Siddiqi MF, Yip R, Yankelevitz DF, Henschke CI, Jirapatnakul A, et al. The importance of low-dose CT screening to identify emphysema in asymptomatic participants with and without a prior diagnosis of COPD. Clin Imaging. 2021;78: 136–141. doi: 10.1016/j.clinimag.2021.03.012 [DOI] [PubMed] [Google Scholar]

Decision Letter 0

Eman Sobh

2 Jan 2023

PONE-D-22-30075Predicted versus CT-derived total lung volume in a general population: the ImaLife studyPLOS ONE

Dear Dr. Vliegenthart,

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HJW is supported by KNAW grant PSA-SA-BD-01, RV is supported by an institutional grant from Siemens Healthineers.

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[Note: HTML markup is below. Please do not edit.]

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Reviewer #1: Yes

Reviewer #2: Yes

**********

2. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #2: I Don't Know

**********

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Reviewer #1: Yes

Reviewer #2: Yes

**********

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Reviewer #2: Yes

**********

5. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: Thank you for asking me review the manuscript by Wisselink and colleagues, which compared the lung total lung volume (TLC) by GLI-model with CT-derived lung volumes (TLV) in healthy participants from the northern part of the Netherlands and found that there was discrepancy between the GLI-predicted TLC and CT-derived TLV. The work itself was performed correctly in terms of statistical technique and the work is well presented. However I have read the manuscript, I am not really sure what is possible to learn that this is useful. In the present study, ages of samples were limited to 45-65 years old, which were quite different from hospital patients with lung diseases, including COPD or interstitial lung diseases. Respiratory clinicians need precise information of lung measurements in healthy older ages. Also, (supine) position and (full inspiratory) breathing might be affecting the result of lung volume measurements. I do not understand the reason of differences in position is in part due to overestimation by the GLI model. The number of non-smoking “healthy” participants was relatively small to conclude the results.

Reviewer #2: This is an interesting study looking into comparing the predicted lung volume with CT derived TLV.

I think excluding patients with COPD or lung diseases alone would not be enough, as there are other diseases that can affect lung volumes like neuromuscular diseases, liver cirrhosis with ascites, and pleural diseases that also needs to be excluded.

Relying on self-reported lung disease is questionable as many asymptomatic patients can have undetected lung diseases particularly patients with mild emphysema who can be former smoker for only 10 pack\\years. This needs to be clarified more.

The difference observed can be explained by the fact that when patients undergo lung volume assessment they are encouraged to achieve their maximal effort which as the authors stated does not happen during CT scanning and the difference in body position when utilizing these two modalities (supine vs upright), I know the authors addressed these weakness, what were the measures used to mitigate these effects on the accuracy of the study?

**********

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Reviewer #2: No

**********

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PLoS One. 2023 Jun 16;18(6):e0287383. doi: 10.1371/journal.pone.0287383.r002

Author response to Decision Letter 0


9 Mar 2023

Editor:

Comment 3:

Thank you for stating the following financial disclosure:

"The authors received no specific funding for this work.

HJW is supported by KNAW grant PSA-SA-BD-01, RV is supported by an institutional grant from Siemens Healthineers.

The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript."

At this time, please address the following queries:

a) Please clarify the sources of funding (financial or material support) for your study. List the grants or organizations that supported your study, including funding received from your institution.

b) State what role the funders took in the study. If the funders had no role in your study, please state: “The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.”

c) If any authors received a salary from any of your funders, please state which authors and which funders.

d) If you did not receive any funding for this study, please state: “The authors received no specific funding for this work.”

Please include your amended statements within your cover letter; we will change the online submission form on your behalf.

Please find our clarification in the following sentences, and in the cover letter: “The position of HJW is supported by KNAW grant PSA-SA-BD-01. The current substudy is part of ImaLife. The ImaLife project is funded by an institutional research grant from Siemens Healthineers and by the Ministry of Economic Affairs and Climate (Netherlands) Policy by means of the PPP Allowance made available by the Top Sector Life Sciences & Health to stimulate public-private partnerships. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.”

The data from the ImaLife study are part of and owned by a third-party, the Lifelines organization. Access to data can be requested by contacting the Lifelines organization (www.lifelines.nl).

Reviewer #1:

Thank you for asking me review the manuscript by Wisselink and colleagues, which compared the lung total lung volume (TLC) by GLI-model with CT-derived lung volumes (TLV) in healthy participants from the northern part of the Netherlands and found that there was discrepancy between the GLI-predicted TLC and CT-derived TLV. The work itself was performed correctly in terms of statistical technique and the work is well presented.

Comment 1.1:

However I have read the manuscript, I am not really sure what is possible to learn that this is useful. In the present study, ages of samples were limited to 45-65 years old, which were quite different from hospital patients with lung diseases, including COPD or interstitial lung diseases. Respiratory clinicians need precise information of lung measurements in healthy older ages.

We thank the reviewer for highlighting this important point. It is especially the requirement of precise information that motivated this study. From our population sample we selected a subpopulation of never-smokers, which we then further limited to participants who did not have any self-reported or diagnosed lung disease. Using these three different populations, we compared the CT-based results to the GLI predictions. Since the GLI predictions are based on healthy never-smokers, the results of the HNS cohort (healthy never-smokers) should have a reasonable agreement with the GLI-based predictions. The conclusion that this is not the case should serve as a warning that the presumed TLC estimate might not be as accurate as can be hoped for. The age range used in our study is shown in the comparative chart by Hall et al. to be mostly linear in all commonly used prediction models, representing a best-case scenario. While our cohort does not extend beyond 65 years old, there is no obvious reason why this warning would not extend to older ages.

Comment 1.2:

Also, (supine) position and (full inspiratory) breathing might be affecting the result of lung volume measurements. I do not understand the reason of differences in position is in part due to overestimation by the GLI model.

We thank the reviewer for highlighting this point. Since this is a clear difference between the two measurement methods, we mention this as the first possible (part) explanation for the difference between CT volume and predicted volume in the Discussion section. We also mention this in the limitations. The research performed by Yamada et al. is used as a reference for the size of this effect. Based on their research we concluded that a standing position results in approximately 10.9% higher inspiratory lung volume than a supine position. In our study we found a difference of 24-31%, meaning that a difference of 13-20% cannot be explained by the positional difference. There must either be a different explanation for this 13-20%, or this is an overestimation by the GLI model. We have added an analysis to assess the magnitude of the effect of the position on inspiratory lung volume. In the Method section we have inserted the following: “For a sensitivity analysis, the volumes reported by Yamada et al. were used to correct for the positional difference between the CT (supine) and PFT (sitting). Yamada et al. performed standing and supine CT scans on 32 healthy volunteers [9]. They found the supine and standing CT volume to be 4.3788 L and 4.8568 L, respectively. Therefore, a correction of 10.9% was added to the CT measurements in this study. This corrected TLV was then compared to the GLI-predicted TLC in a Bland-Altman analysis.”

This sensitivity analysis resulted in the addition of this paragraph to the Results: “When applying the position-correction to the CT-measured TLV, the comparison results did not meaningfully change. The mean difference was reduced slightly from 1.0/1.6 L to 0.4/0.9 L. The ΔLoA increased slightly to 3.5/4.6 L compared to the original values of 3.2/4.2 L.” In the Discussion section we have inserted: “Even after correcting for the expected difference found by Yamada et al., there is still a systematic difference and high variability”.

In the Discussion section we mention two other possible explanations for the higher lung volume in (standing) lung function testing vs (supine) chest CT: technical (segmentation-based) differences and pathology. The segmentation may cause a difference of 20-60 mL. It must be noted that this will only affect the systematic difference, as the volume of the bronchial tree and conducting airways is relatively stable. We have now added a remark to this effect in the Discussion: “It should furthermore be emphasized that this would only affect the systematic difference between CT and spirometry, and not the variability.” Lastly, the limitation section already mentioned a possible further explanatory factor, although we expect the impact to be very small: “One limitation of this study is the use of the clinical standard breath coaching, which does not completely ensure full inspiration. The breath coaching during spirometry tends to more effectively ensure maximal effort. However, in view of the healthy cohort selected for this study, and the usual ease to reach maximum inspiration in healthy individuals, we expect that the breath coaching difference will have had very limited impact on measurements.”

Comment 1.3:

The number of non-smoking “healthy” participants was relatively small to conclude the results.

We agree with the reviewer that a cohort size of 119 cases for the smallest cohort selection is relatively small, although not unusually so. Given the large limits of normality shown by Hall et al. (who used data from 6815 participants for the TLC models), it is unlikely that increasing the number of participants would substantially improve the fit results. Although the confidence in the conclusions would increase with a larger cohort size, we do not expect the conclusion itself to be different. We mitigated the potential impact of small sample in two ways. Firstly, we performed the analysis on three cohorts (from more general population to restricted healthy cohort), which led to similar results, increasing our confidence. Secondly, we avoided overly strong statements in our conclusion.

Given the inherent spread in the population (as evident from Hall et al.), and the considerations from Guillamet (cited in manuscript, DOI: 10.1016/J.HEALUN.2022.03.012), it seems unlikely that a larger cohort would fundamentally change the outcomes. That is why in the Discussion section we advocate either for the application of a different strategy to predict lung volume, or to perform an actual measurement.

We have added a remark to the limitation section: “A final limitation concerns the cohort size. While it is unlikely the results would substantially improve with a larger cohort size, a larger number of cases would increase confidence in the conclusions, especially in the case of the HNS cohort (never-smokers without pulmonary disease).”

Reviewer #2:

This is an interesting study looking into comparing the predicted lung volume with CT derived TLV.

Comment 2.1:

I think excluding patients with COPD or lung diseases alone would not be enough, as there are other diseases that can affect lung volumes like neuromuscular diseases, liver cirrhosis with ascites, and pleural diseases that also needs to be excluded.

We thank the reviewer for highlighting this concern. While we agree with the reviewer that non-pulmonary diseases may affect lung volume, one of our goals was to establish a sample similar to the population used to develop the GLI model. Hall et al. report defining health as “never-smoked with no history of self-reported or doctor-diagnosed respiratory disease”.

To mitigate this potential limitation, outliers (i.e. cases with a large difference between predicted and measured) were visually reviewed. The description for this visual review (‘e.g. severe emphysema/fibrosis’) was not intended to be exhaustive and has now been amended to explicitly include marked pleural disease. Furthermore, in a presumed healthy population invited for (optional) CT scanning as part of an epidemiological study we do not expect severely diseased patients (such as liver cirrhosis with ascites) to have accepted the invitation. Also, one specific exclusion criterion of the ImaLife study, was that invited individuals should not have had a chest CT scan in the past year.

We have inserted a comment in the Discussion highlighting this concern to readers, which reads: “In addition to this, there are non-pulmonary conditions that may affect the lung volume, like obesity and neuromuscular diseases [Jones2006,Bach2000].”

For this revision, we additionally excluded all participants from the healthy cohort that received a follow-up scan for an intermediate lung nodule (100-300 mm³), or were referred to the GP for an incidental finding on the ImaLife chest CT scan (like significant pleural disease or aortic aneurysm). This resulted in the exclusion of an additional 17 participants. While the supplemental table showed the correct number of participants in the HNS cohort (64+63), the manuscript contained an incorrect number. This has now been rectified.

The relevant sections of the Methods now read: “Prior to the main analyses of this study, we excluded participants with COPD or self-reported lung disease, as well as participants who received a follow-up CT scan or received the advice to visit the GP due to a clinically relevant, incidentally detected finding (n=127).”

And “If a participant was invited for a follow-up scan because an intermediate size lung nodule was found or received the advice to visit the GP due to a clinically relevant, incidentally detected finding, this participant was considered non-healthy for the purpose of this study. The exact criteria for a follow-up or referral can be found in the ImaLife design paper [20].”

Comment 2.2:

Relying on self-reported lung disease is questionable as many asymptomatic patients can have undetected lung diseases particularly patients with mild emphysema who can be former smoker for only 10 pack\\years. This needs to be clarified more.

We agree with the reviewer that it is easy to miss mild disease when relying on self-reporting. That is one of the reasons why we used the PFT results in addition to self-reporting to determine the presence or absence of lung disease. To further mitigate this concern, the visual review was intended to identify a cause for a large under- or overestimation.

We have clarified this in the Method section, which now reads: “For the purposes of the analyses in this study, a participant was considered to be healthy if the spirometry did not indicate COPD (GOLD stage 0) and if she/he reported no COPD, emphysema, chronic bronchitis, asthma or interstitial lung disease.”

Comment 2.3:

The difference observed can be explained by the fact that when patients undergo lung volume assessment they are encouraged to achieve their maximal effort which as the authors stated does not happen during CT scanning and the difference in body position when utilizing these two modalities (supine vs upright), I know the authors addressed these weakness, what were the measures used to mitigate these effects on the accuracy of the study?

Please see the answer to Comment 1.2, which concerns the same issue.

Attachment

Submitted filename: Response to reviewers.docx

Decision Letter 1

Eman Sobh

5 Jun 2023

Predicted versus CT-derived total lung volume in a general population: the ImaLife study

PONE-D-22-30075R1

Dear Dr. Vliegenthart,

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.

Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication.

An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org.

If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org.

Kind regards,

Eman Sobh, M.D.

Academic Editor

PLOS ONE

Additional Editor Comments (optional):

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation.

Reviewer #1: All comments have been addressed

Reviewer #3: All comments have been addressed

**********

2. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #3: Yes

**********

3. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #3: Yes

**********

4. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #3: Yes

**********

5. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #3: Yes

**********

6. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: The authors have responded well according to the reviewers' comments. The manuscript was fully revised for publication to PLOS ONE.

Reviewer #3: The authors were addressed all the comments. The manuscript is a very good contribution in the prediction of lung volume based on global lung function initiative versus CT driven total lung volume.

**********

7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: No

Reviewer #3: Yes: Amr A. Abd-Elghany

**********

Acceptance letter

Eman Sobh

8 Jun 2023

PONE-D-22-30075R1

Predicted versus CT-derived total lung volume in a general population: the ImaLife study

Dear Dr. Vliegenthart:

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department.

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PLOS ONE Editorial Office Staff

on behalf of

Dr. Eman Sobh

Academic Editor

PLOS ONE

Associated Data

    This section collects any data citations, data availability statements, or supplementary materials included in this article.

    Supplementary Materials

    S1 Fig. Syngo.Via Pulmo 3D interface screenshot.

    (PNG)

    S1 Table. Population characteristics stratified by sex.

    Participants were excluded from the HNS (healthy never-smokers) sub-cohort if they reported a smoking history, had self-reported lung disease, were determined by the spirometry to have COPD, or if any of these were missing.

    (DOCX)

    S2 Table. Outcome comparison.

    (DOCX)

    S1 Equations. Results of linear regression analysis.

    (DOCX)

    Attachment

    Submitted filename: Response to reviewers.docx

    Data Availability Statement

    Lifelines adheres to standards for data availability. Due to ethical restrictions imposed by the Lifelines Scientific Board and the Medical Ethical Committee of the University Medical Center Groningen related to protecting patient privacy, the data are not publicly available. The data catalogue of Lifelines is publicly accessible on https://www.lifelines.nl/researcher/data-and-biobank/$6102/$6104. All international researchers can obtain metadata at the Lifelines research office (research@lifelines.nl), for which a fee is required. The Lifelines system allows access for reproducibility of the study results. For the imaging data, Lifelines or the corresponding author can be contacted to discuss options for access.


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