Figure 1.

CoVigator system components. The accessor reads external data and stores it in an SQL database. The processor reads the stored data and distributes the processing of every sample in an HPC cluster via Dask. The pipeline processes FASTA and FASTQ data and finally stores the results back in the database (See Figure S1 for a more detailed FASTA and FASTQ processing pipeline). The dashboard reads the results and displays them in a set of interactive plots. The results are also available in raw format.