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[Preprint]. 2024 May 16:2023.06.02.543460. Originally published 2023 Jun 2. [Version 4] doi: 10.1101/2023.06.02.543460

Multimodal analyses reveal genes driving electrophysiological maturation of neurons in the primate prefrontal cortex

Yu Gao, Qiping Dong, Kalpana Hanthanan Arachchilage, Ryan Risgaard, Jie Sheng, Moosa Syed, Danielle K Schmidt, Ting Jin, Shuang Liu, Sara A Knaack, Dan Doherty, Ian Glass, Jon E Levine, Daifeng Wang, Qiang Chang, Xinyu Zhao, Andre MM Sousa
PMCID: PMC10312516  PMID: 37398253

Abstract

The prefrontal cortex (PFC) is critical for myriad high-cognitive functions and is associated with several neuropsychiatric disorders. Here, using Patch-seq and single-nucleus multiomic analyses, we identified genes and regulatory networks governing the maturation of distinct neuronal populations in the PFC of rhesus macaque. We discovered that specific electrophysiological properties exhibited distinct maturational kinetics and identified key genes underlying these properties. We unveiled that RAPGEF4 is important for the maturation of resting membrane potential and inward sodium current in both macaque and human. We demonstrated that knockdown of CHD8, a high-confidence autism risk gene, in human and macaque organotypic slices led to impaired maturation, via downregulation of key genes, including RAPGEF4. Restoring the expression of RAPGEF4 rescued the proper electrophysiological maturation of CHD8-deficient neurons. Our study revealed regulators of neuronal maturation during a critical period of PFC development in primates and implicated such regulators in molecular processes underlying autism.

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