Table 2.
10 Most Underexpressed Genes in the RNA-seq transcriptome of chick choroids treated with 1.5 mM PAPA-NONOate
| Accession number | Ensembl ID | FPKM control (L) ± SEM | FPKM treated (R) ± SEM | Fold Change | Gene ID |
|---|---|---|---|---|---|
| XM001232833 | ENSGALG00000014513 | 13.56922 ± 2.87044982 | 0.8922052 ± 0.267956974 | −15.25 | CDCA3 |
| XM040655444 | ENSGALG00000015691 | 21.53703 ± 3.37073041 | 2.20113 ± 14.25296 | −9.79 | SMC2 |
| - | ENSGALG00000050836 | 8.73492 ± 2.3000145 | 1.11604 ± 6.2052 | −7.79 | Novel gene |
| XM040706642 | ENSGALG00000055004 | 18.35300 ± 4.12570678 | 2.37274 ± 13.43117 | −7.74 | Uncharacterized LOC107054158 (predicted) |
| XM040687237 | ENSGALG00000048771 | 8.415996 ± 1.035199107 | 1.0873174 ± 0.252546471 | −7.72 | SPAG5 (predicted) |
| XM040679569 | ENSGALG00000009349 | 7.45987 ± 1.17821557 | 1.00821 ± 2.384324 | −7.39 | SLC7A14 |
| XM040668831 | ENSGALG00000016442 | 23.06680 ± 3.3598115 | 3.20059 ± 14.08091 | −7.21 | RRM2 |
| XM040689493 | ENSGALG00000005961 | 25.57842 ± 4.826339933 | 3.601136 ± 0.440039301 | −7.11 | DGUOK |
| XM015288064 | ENSGALG00000003085 | 28.17486 ± 4.72625028 | 4.229584 ± 0.840515731 | −6.66 | CDK1 |
| NM001030731 | ENSGALG00000008439 | 14.71402 ± 1.520979489 | 2.289716 ± 0.233476644 | −6.42 | CD36 |