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Overview of cell types and their respective markers used for cell annotation
| Cell type | Markers |
|---|---|
| T cells | Cd3d, Cd3e, Cd3g, Cd8a, Cd4, Ptprc |
| B cells | Cd19, Cd22, Ms4a1, Ptprc |
| Neutrophils | Itgam, Cd14, S100a8, S100a9m |
| Scx + cells | Scx, Tnmd, Col1a1, Tnc |
| FAPs | Ly6a, Ly6e, Pdgfra, Dcn |
| Glial cells | Plp1, Kcna1, S100b, Mbp |
| MuSCs | Pax7, Myod1, Vcam1, Sdc4 |
| SMCs | Acta1, Pdgfrb, Myl9, Acta2 |
| Pericytes | Pdgfrb, Notch3, Cspg4, Kcnj8 |
| Endothelial cells | Pecam1, Cdh5 |
