Abstract
Background
Epidemiological studies that examined the association between Parkinson's disease (PD) and cancers led to inconsistent results, but they face a number of methodological difficulties.
Objective
We used results from genome‐wide association studies (GWASs) to study the genetic correlation between PD and different cancers to identify common genetic risk factors.
Methods
We used individual data for participants of European ancestry from the Courage‐PD (Comprehensive Unbiased Risk Factor Assessment for Genetics and Environment in Parkinson's Disease; PD, N = 16,519) and EPITHYR (differentiated thyroid cancer, N = 3527) consortia and summary statistics of GWASs from iPDGC (International Parkinson Disease Genomics Consortium; PD, N = 482,730), Melanoma Meta‐Analysis Consortium (MMAC), Breast Cancer Association Consortium (breast cancer), the Prostate Cancer Association Group to Investigate Cancer Associated Alterations in the Genome (prostate cancer), International Lung Cancer Consortium (lung cancer), and Ovarian Cancer Association Consortium (ovarian cancer) (N comprised between 36,017 and 228,951 for cancer GWASs). We estimated the genetic correlation between PD and cancers using linkage disequilibrium score regression. We studied the association between PD and polymorphisms associated with cancers, and vice versa, using cross‐phenotypes polygenic risk score (PRS) analyses.
Results
We confirmed a previously reported positive genetic correlation of PD with melanoma (Gcorr = 0.16 [0.04; 0.28]) and reported an additional significant positive correlation of PD with prostate cancer (Gcorr = 0.11 [0.03; 0.19]). There was a significant inverse association between the PRS for ovarian cancer and PD (odds ratio [OR] = 0.89 [0.84; 0.94]). Conversely, the PRS of PD was positively associated with breast cancer (OR = 1.08 [1.06; 1.10]) and inversely associated with ovarian cancer (OR = 0.95 [0.91; 0.99]). The association between PD and ovarian cancer was mostly driven by rs183211 located in an intron of the NSF gene (17q21.31).
Conclusions
We show evidence in favor of a contribution of pleiotropic genes to the association between PD and specific cancers. © 2023 The Authors. Movement Disorders published by Wiley Periodicals LLC on behalf of International Parkinson and Movement Disorder Society. This article has been contributed to by U.S. Government employees and their work is in the public domain in the USA.
Keywords: Parkinson's disease, cancer, genetic correlation, polygenic risk score, pleiotropy
Introduction
Although the frequency of cancers and neurodegenerative diseases increases with age, their cellular consequences are very different, with cell proliferation in cancers and neuronal death in neurodegenerative diseases. Parkinson's disease (PD) is caused by the loss of dopaminergic neurons in the substantia nigra pars compacta.
Epidemiological studies that examined the association between PD and cancer support a general inverse association, ie, patients with PD tend to have a lower risk for cancer in general and cancer patients have a lower risk for PD. 1 This inverse association is mostly explained by an inverse association with smoking‐related cancers (lung, bladder, and colorectal cancers) because of a lower prevalence of smoking in patients with PD, but an inverse association has also been reported for some non‐smoking‐related cancers. 1 , 2 In addition, after stratification on smoking status, two studies found an inverse association between smoking‐related cancers and PD among ever smokers, whereas there was a positive association among never smokers, 3 , 4 in favor of an interaction with smoking. In addition to smoking, other exposures associated with PD and cancer risk (eg, physical activity, reproductive factors in women) may also contribute to confound PD–cancer associations. Other possible biases in epidemiological studies include diagnostic bias, competing risks, or selective survival. 5 , 6 , 7
Alternatively, positive associations between PD and specific cancers (melanoma, skin, breast, brain, and prostate) have also been reported. 1 , 8 In particular, the positive association between PD and melanoma is well established. 9 This association exists both for melanomas occurring before and after PD diagnosis, which does not support the role of antiparkinsonian medications as a causal factor. 10 It has been hypothesized that this association could be explained by common genetic factors, because people with a familial history of melanoma had an increased risk for PD and, conversely, relatives of patients with PD had an increased risk for melanoma. 1
Specific genes involved in familial forms of PD (SNCA, Parkin, LRRK2) have been implicated in biological mechanisms associated with breast, prostate, and thyroid cancers. 1 , 11 , 12 Inactivation of PARK2, a gene that causes recessive forms of PD, is associated with an increased cancer risk, highlighting its role as tumor suppressor, 13 particularly in breast and ovarian cancers. 14 Epidemiological studies support an increased risk for cancer in LRRK2‐G2019S carriers. 15 There is also an overrepresentation of somatic mutations of PARK genes in melanoma cases. 16 PARK6 (PINK1) is also known to play a role in breast and ovarian cancers. 17
A two‐sample Mendelian randomization analysis did not find evidence in favor of a causal relationship between several cancers (including melanoma, breast, and prostate) and PD, thus suggesting that the previously reported associations between PD and cancers may be explained by pleiotropic genetic factors or shared biology. 18 A study using a candidate gene approach found no association between PD (Population Architecture through Genomics and Environment [PAGE] study, International Parkinson Disease Genomics Consortium [iPDGC]) and genetic polymorphisms associated with melanoma or skin pigmentation in genome‐wide association studies (GWASs). 19 One study used iPDGC and 23andMe to show a positive significant genetic correlation between melanoma and PD. 20 Another study examined the genetic correlation between three neurodegenerative diseases and multiple cancers; for PD, they also used iPDGC and 23andMe data and showed positive correlations with melanoma and prostate cancers, although these associations would not have been statistically significant after correction for multiple testing. 21
In this article, we aimed at identifying common genetic risk factors of PD and cancers previously associated with PD (melanoma, breast, prostate) or for which an association is suspected (lung, ovary, thyroid). First, we estimated genetic correlations between PD and cancers using results from large GWASs and linkage disequilibrium (LD) score regression. Second, we analyzed the association of polygenic risk scores (PRSs) for PD (and their individual single‐nucleotide polymorphisms [SNPs]) with each cancer and, conversely, the association of PRSs for each cancer (and their individual SNPs) with PD.
Subjects and Methods
GWAS Datasets on PD
We used data from two PD consortia: individual data from the Courage‐PD consortium (Comprehensive Unbiased Risk Factor Assessment for Genetics and Environment in Parkinson's Disease) 22 and summary statistics from iPDGC. 23 , 24
In Courage‐PD, we excluded studies performed in Asian populations, studies that included cases only, and those with less than 50 cases and 50 controls. Only individuals from European ancestry were retained for the analysis. We also excluded individuals overlapping with iPDGC. We finally used data from 23 of 35 case–control studies, totaling 8919 cases and 7600 controls (Table S1). The NeuroChip array was used to genotype all the samples (see Supporting Information Methods). Imputation of autosomal variants was performed separately in each study, based on 271,398 to 373,664 SNPs. The mean number of SNPs available in each study after imputation was 13,710,549. In each study, SNP frequencies were compared in cases versus controls under an additive model using logistic regression adjusted for sex and the first four principal components. We meta‐analyzed the summary statistics from the 23 GWASs using an inverse‐variance fixed‐effects (I2 ≤ 25%) or random‐effects (I2 > 25%) model (see Supporting Information Methods).
As a replication dataset for PD, we used GWAS summary statistics from the iPDGC consortium (33,674 cases, 449,056 controls). 23 Sex‐stratified summary statistics are also available for 13,020 male PD cases, 7936 paternal proxy cases, 89,660 male controls, 7947 female PD cases, 5473 maternal proxy cases, and 90,662 female controls. 24
GWAS Datasets on Cancer
We used summary statistics from European ancestry–based GWASs on cancer susceptibility: Breast Cancer Association Consortium (BCAC) 25 (122,977 breast cancer cases, 105,974 controls), Melanoma Meta‐Analysis Consortium (MMAC) 26 (12,814 melanoma cases, 23,203 controls), Prostate Cancer Association Group to Investigate Cancer Associated Alterations in the Genome (PRACTICAL) 27 (79,148 prostate cancer cases, 61,106 controls), International Lung Cancer Consortium (ILCCO) 28 (29,266 lung cancer cancers, 56,450 controls), Ovarian Cancer Association Consortium (OCAC) 29 (25,509 ovarian cancer cases, 40,941 controls), and Epidemiology of Thyroid Cancer Consortium (EPITHYR) 30 (1554 differentiated thyroid cancer cases, 1973 controls).
LD Score Regression
To investigate the genetic correlation between PD and each cancer, we performed cross‐trait LD score regression. 31 We performed one analysis for each PD–cancer pair using summary statistics from the corresponding GWAS. Before running the analyses, we implemented the following filters 31 : SNPs with imputation scores INFO > 0.9; minor allele frequency (MAF) > 0.01; harmonized to HapMap3 SNPs with 1000 Genomes EUR MAF > 0.05; and removal of indels, structural variants, strand‐ambiguous SNPs, and SNPs whose alleles did not match those in 1000 Genomes. This was performed by running the munge‐sumstats.pr script included in ldsc. We ran ldsc.py from the ldsc package after excluding the HLA region. The final numbers of SNPs considered for each pairwise genetic correlation analysis are reported in Table S2.
Genetic correlations were estimated separately for Courage‐PD and iPDGC and were then meta‐analyzed using an inverse‐variance weighting method. We used the false discovery rate (FDR) to take into account multiple testing.
Cross‐Phenotype PRS Analysis
Cross‐phenotype PRS analysis allows investigating whether an individual‐level genome‐wide genetic prediction of a disease has substantive power to predict another disease. For each PD–cancer pair, we examined the association of the PRS for one of the diseases with the other disease, and vice versa.
PRSs for each cancer were aligned in Courage‐PD using independent genome‐wide significant SNPs and corresponding weights for PRS previously published in the largest GWAS to date on this cancer. 27 , 28 , 32 , 33 , 34 , 35 , 36 The lists of SNPs and corresponding weights used for cancer PRSs are described in Table S3A–F. The association between cancer PRSs and PD was examined in each of the 23 studies of Courage‐PD using logistic regression adjusted for sex and four principal components. An inverse‐variance weighted meta‐analysis of regression coefficients was then performed. The extent of heterogeneity was estimated using the I2 statistic. 37 A random‐effects meta‐analysis was performed if I2 > 25%, and a fixed‐effects model was used otherwise. The association between cancer PRSs and PD was calculated in iPDGC, for which individual data were not available, using the grs.summary function from the gtx R package 38 based on summary statistics.
Analyses of the PD PRS in cancer were based on both 88 SNPs identified by Nalls et al 23 and 44 SNPs identified by Chang et al 39 to compare the results. For non‐retrieved SNPs, we searched for proxies at r 2 > 0.8 with the proxysnps function based on the 1000 Genomes Project (https://github.com/slowkow/proxysnps). We did not use one palindromic SNP (rs1555399) with MAF > 0.45. For thyroid cancer, we used the same strategy as for cancer PRSs in Courage‐PD because individual data were available. For all other cancers for which individual data were not available, we used the same strategy as for the analysis between cancer PRSs and PD using summary statistics from iPDGC. Results of associations with PRSs for cancers in Courage‐PD and iPDGC were meta‐analyzed using the inverse‐variance weighting method as described earlier. We calculated an FDR to correct for multiple testing for each direction of the cross‐phenotype PRS analysis.
Shared Risk Loci
For PD–cancer pairs for which we identified a significant cross‐phenotype PRS association, we further explored associations at the level of individual SNPs from the PRSs, to identify pleiotropic risk loci that influence these associations. For each PD–cancer pair, we determined which SNPs played a role while correcting for multiple testing using the FDR.
Stratified Analyses
Information on sex was available in Courage‐PD and the latest iPDGC GWAS. 24 We examined the association of cancer PRSs with PD in men and women to identify sex‐specific associations.
In addition, the ILCCO consortium performed GWASs stratified by smoking status (ever/never) and histology (small cell carcinoma, squamous cell carcinoma, and adenocarcinoma). This allowed us to examine the association of PD PRSs with lung cancer risk according to histology and smoking status.
Results
LD Score Regression
The meta‐analysis of genetic correlations identified two significant positive genetic correlations of PD with melanoma (Gcorr‐meta = 0.16, P meta = 0.02, FDR = 0.047) and prostate cancer (Gcorr‐meta = 0.11, P meta = 0.01, FDR = 0.047) that remained significant after correction for multiple testing (FDR < 0.05) (Table 1). There was no heterogeneity between the Courage‐PD and iPDGC datasets. The genetic correlation between PD and breast cancer was positive and consistent in both datasets, but not statistically significant (P meta = 0.24, FDR = 0.37). The other three cancers showed heterogeneous genetic correlations in sizes and directions between Courage‐PD and iPDGC.
TABLE 1.
Genetic correlations between PD and cancers
| Courage‐PD | iPDGC | Meta‐analysis | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cancer | Gcorr | CI95% | P | Gcorr | CI95% | P | Gcorr | CI95% | P meta | P het | FDR |
| Breast cancer | 0.06 | [−0.06; 0.18] | 0.36 | 0.04 | [−0.06; 0.14] | 0.46 | 0.05 | [−0.03; 0.13] | 0.24 | 0.84 | 0.37 |
| Ovarian cancer | 0.04 | [−0.20; 0.28] | 0.74 | −0.13 | [−0.27; 0.01] | 0.07 | −0.09 | [−0.21; 0.03] | 0.17 | 0.23 | 0.33 |
| Melanoma | 0.18 | [−0.02; 0.38] | 0.09 | 0.14 | [−0.02; 0.30] | 0.08 | 0.16 | [0.04; 0.28] | 0.02 | 0.80 | 0.047 |
| Thyroid cancer | 0.28 | [−0.05; 0.61] | 0.10 | −0.02 | [−0.33; 0.29] | 0.88 | 0.11 | [−0.13; 0.35] | 0.32 | 0.19 | 0.39 |
| Prostate cancer | 0.11 | [−0.03; 0.25] | 0.10 | 0.11 | [−0.01; 0.23] | 0.05 | 0.11 | [0.03; 0.19] | 0.01 | 0.98 | 0.047 |
| Lung cancer | 0.14 | [−0.02; 0.30] | 0.10 | −0.05 | [−0.02; 0.09] | 0.40 | 0.02 | [−0.08; 0.12] | 0.72 | 0.07 | 0.72 |
Abbreviations: PD, Parkinson's disease; iPDGC, International Parkinson Disease Genomics Consortium; CI95%, 95% confidence interval; Gcorr, genetic correlation; P meta, P value from the meta‐analysis of both datasets; FDR, false discovery rate.
Cross‐Phenotype PRS Analysis
Analyses of the association between cancer PRSs and PD are shown in Table 2. We found one significant inverse association between the PRS for ovarian cancer and PD (P meta = 2.1 × 10−5, FDR = 1.1 × 10−4). Suggestive positive associations were observed for the PRS for breast cancer (P meta = 0.05, FDR = 0.10) and lung cancer (P meta = 0.02, FDR = 0.07) with PD, but these associations became nonsignificant after correction for multiple testing.
TABLE 2.
Association between cancer PRSs and PD
| Courage‐PD | iPDGC | Meta‐analysis | ||||||
|---|---|---|---|---|---|---|---|---|
| PRS | OR [CI95%] | P | OR [CI95%] | P | OR [CI95%] | P meta | P het | FDR |
| Breast cancer | 1.05 [0.98; 1.12] | 0.17 | 1.04 [0.99; 1.10] | 0.15 | 1.04 [1.00; 1.09] | 0.05 | 0.86 | 0.10 |
| Ovarian cancer | 0.88 [0.80; 0.96] | 5.2 × 10−3 | 0.90 [0.84; 0.96] | 1.2 × 10−3 | 0.89 [0.84; 0.94] | 2.1 × 10−5 | 0.76 | 1.1 × 10−4 |
| Melanoma | 0.99 [0.86; 1.15] | 0.90 | 1.09 [0.98; 1.22] | 0.11 | 1.06 [0.97; 1.15] | 0.22 | 0.29 | 0.33 |
| Thyroid cancer | 1.02 [0.96; 1.08] | 0.53 | 1.00 [0.96; 1.05] | 0.96 | 1.01 [0.97; 1.04] | 0.65 | 0.66 | 0.65 |
| Prostate cancer | 1.01 [0.96; 1.07] | 0.61 | 1.01 [0.97; 1.06] | 0.57 | 1.01 [0.98; 1.05] | 0.44 | 0.96 | 0.53 |
| Lung cancer | 1.00 [0.92; 1.09] | 0.94 | 1.10 [1.03; 1.17] | 5.5 × 10−3 | 1.06 [1.01; 1.12] | 0.02 | 0.11 | 0.07 |
Abbreviations: PRS, polygenic risk score; PD, Parkinson's disease; iPDGC, International Parkinson Disease Genomics Consortium; OR, odds ratio; CI95%, 95% confidence interval; P meta, P value from the meta‐analysis of both datasets; P het, P value of heterogeneity; FDR, false discovery rate.
Regarding the association between the PD PRSs and cancers (Table 3), we found a positive association between both PD PRSs and breast cancer, with a stronger association for the PRSChang (odds ratio [OR] = 1.08, P = 4.6 × 10−14, FDR = 2.7 × 10−13) than PRSNalls (OR = 1.03, P = 1.9 × 10−4, FDR = 1.14 × 10−3). We also found an inverse association between the PRSChang and ovarian cancer (OR = 0.95, P = 0.013, FDR = 0.04); the association was similar for the PRSNalls, but it was borderline significant and became nonsignificant after correction for multiple testing.
TABLE 3.
Association between PD PRSs and cancers
| PRSChang | PRSNalls | |||||
|---|---|---|---|---|---|---|
| Disease | OR [CI95%] | P | FDR | OR [CI95%] | P | FDR |
| Breast cancer | 1.08 [1.06; 1.10] | 4.6 × 10−14 | 2.7 × 10−13 | 1.03 [1.01; 1.05] | 1.9 × 10−4 | 1.14 × 10−3 |
| Ovarian cancer | 0.95 [0.91; 0.99] | 0.013 | 0.04 | 0.97 [0.94; 1.00] | 0.07 | 0.21 |
| Melanoma | 1.04 [0.98; 1.11] | 0.19 | 0.38 | 1.05 [1.00; 1.10] | 0.43 | 0.43 |
| Thyroid cancer | 0.92 [0.79; 1.07] | 0.30 | 0.45 | 0.93 [0.82; 1.05] | 0.25 | 0.375 |
| Prostate cancer | 1.00 [0.97; 1.02] | 0.80 | 0.80 | 1.01 [0.99; 1.03] | 0.41 | 0.43 |
| Lung cancer | 0.94 [0.79; 1.13] | 0.51 | 0.61 | 0.98 [0.95; 1.00] | 0.16 | 0.32 |
Abbreviations: PD, Parkinson's disease; PRS, polygenic risk score; OR, odds ratio; CI95%, 95% confidence interval; FDR, false discovery rate.
Shared Risk Loci
We searched for pleiotropic SNPs between PD and breast cancer on one side, and between PD and ovarian cancer on the other side, by examining associations for individual SNPs included in the PD, breast cancer, or ovarian cancer PRSs (Tables S4A–D and S5A–D).
The PRSs for PD and ovarian cancer share a common region on locus 17q21.31 that was also associated with breast cancer (Tables 4 and 5). This region is represented by four SNPs in high LD: rs183211, rs17649553, rs62053943 (pairwise r 2 > 0.7, D′ = 1 in 1000 Genome CEU), and rs117615688 (r 2 < 0.14, D′ = 1 with the three other SNPs). Associations with these SNPs were in the same direction for PD and breast cancer, but in the inverse direction with ovarian cancer. These SNPs are located in introns of three different genes: NSF (N‐ethylmaleimide‐sensitive factor, vesicle fusing ATPase), MAPT (microtubule‐associated protein tau), and CRHR1 (Corticotropin‐Releasing Hormone Receptor 1). These results are in favor of a common haplotype associated with the three diseases. The inverse cross‐phenotype association between PD and ovarian cancer was mostly driven by this locus. No other SNPs of the PD PRS were significantly associated with ovarian cancer (or conversely) after correcting for multiple testing.
TABLE 4.
SNPs of PRSs for PD associated with breast or ovarian cancer
| Weight in PRSs for PD | Cancer | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Locus | Gene | SNP | Position (kb) | EA | BA | ORChang | ORNalls | Type | OR | CI95% | P |
| 2q11.2 | MAP4K4 | rs11683001 | 102,396 | A | T | – | 1.07 | Breast | 1.03 | [1.01, 1.04] | 1.6 × 10−4 |
| 2q11.2 | MAP4K4 | rs34043159 | 102,413 | C | T | 1.07 | – | Breast | 1.02 | [1.01, 1.04] | 2.8 × 10−4 |
| 6p21.32 | / | rs9275326 | 32,666 | C | T | 1.17 | – | Breast | 1.03 | [1.01, 1.05] | 1.8 × 10−3 |
| 16q12.1 | CASC16 | rs4784227 | 52,599 | T | C | 1.08 | – | Breast | 1.24 | [1.22, 1.26] | 6.8 × 10−201 |
| CASC16 | rs3104783 | 52,636 | A | C | – | 1.07 | Breast | 1.10 | [1.09, 1.11] | 1.6 × 10−52 | |
| 17q21.2 | RETREG3 | rs12951632 | 40,741 | T | C | – | 1.07 | Breast | 0.98 | [0.96, 0.99] | 5.1 × 10−4 |
| 17q21.31 | CRHR1 | rs62053943 | 43,744 | C | T | – | 1.31 | Ovarian | 0.89 | [0.85, 0.92] | 5.0 × 10−9 |
| – | 1.31 | Breast | 1.06 | [1.04, 1.08] | 8.6 × 10−11 | ||||||
| CRHR1 | rs117615688 | 43,798 | G | A | – | 1.26 | Ovarian | 0.91 | [0.86, 0.96] | 7.0 × 10−4 | |
| – | 1.26 | Breast | 1.04 | [1.01, 1.07] | 8.7 × 10−3 | ||||||
| MAPT | rs17649553 | 43,994 | C | T | 1.28 | – | Ovarian | 0.89 | [0.87, 0.92] | 1.2 × 10−12 | |
| 1.28 | – | Breast | 1.05 | [1.03, 1.07] | 1.5 × 10−10 | ||||||
| 17q23.2 | BRIP1 | rs61169879 | 59,917 | T | C | – | 1.09 | Breast | 1.03 | [1.02, 1.05] | 3.9 × 10−3 |
Abbreviations: SNP, single‐nucleotide polymorphism; PRS, polygenic risk score; PD, Parkinson's disease; EA, effect allele; BA, baseline allele; OR, odds ratio; CI95%, 95% confidence interval.
TABLE 5.
SNPs of PRSs for breast or ovarian cancer associated with PD
| Cancer | Courage‐PD | iPDGC | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Locus | Gene | SNP | Position (kb) | EA | BA | Type | OR PRS | OR | CI95% | P | OR | CI95% | P |
| 16q12.1 | CASC16 | rs35668161 | 52,538 | A | C | Breast | 1.12 | 1.09 | [1.03, 1.15] | 3.6 × 10−3 | 1.08 | [1.04, 1.12] | 1.5 × 10−4 |
| CASC16 | rs4784227 | 52,599 | T | C | Breast | 1.11 | 1.07 | [1.01, 1.14] | 0.02 | 1.08 | [1.04, 1.12] | 9.4 × 10−5 | |
| 17q21.31 | NSF | rs183211 | 44,788 | A | G | Ovarian | 1.25 | 0.78 | [0.74, 0.83] | 1.8 × 10−17 | 0.81 | [0.77, 0.84] | 9.0 × 10−21 |
Abbreviations: SNP, single‐nucleotide polymorphism; PRS, polygenic risk score; PD, Parkinson's disease; iPDGC, International Parkinson Disease Genomics Consortium; EA, effect allele; BA, baseline allele; OR PRS, odds ratio of the PRS; OR, odds ratio; CI95%, 95% confidence interval.
Of the SNPs from the PD PRSs, six were significantly associated with breast cancer and were located at five different loci (Table 4): 2q11.2 (in an intron of MAP4K4, mitogen‐activated protein kinase 4), 6p21.32, 16q12.1 (intronic region of CASC16, cancer susceptibility 16), 17q23.2 (in an intron of BRIP1, BRCA1 interacting protein C‐terminal helicase 1) with SNPs associated in the same direction, and 17q21.2 with SNPs inversely associated (in an intron of RETREG3, reticulophagy regulator family member 3).
Of the SNPs from the breast cancer PRS, rs3566861 located at 16q12.1 was in common with the PRSChang. The two SNPs at locus 16q12.1 from the breast cancer PRS are in high LD (r2 = 0.87, D′ = 0.97) and were associated with PD in iPDGC (rs4784227: OR = 1.08, P = 9.4 × 10−5; rs3566861: OR = 1.08, P = 1.5 × 10−4) (Table 5).
Stratified Analyses
Associations of the cancer PRSs with PD in men and women are shown in Table S6A,B. The inverse association between the ovarian cancer PRS and PD was present both in women (P meta = 3.23 × 10−4) and in men (P meta = 1.38 × 10−4) with the same effect size (OR = 0.88) and similar associations in Courage‐PD and iPDGC. The association of the breast cancer PRS with PD was stronger in men (OR = 1.08, P meta = 3 × 10−3), in whom it was driven by iPDGC, than in women (OR = 1.05, P meta = 0.07). The association between the lung cancer PRS and PD was present only in women (OR = 1.08, P = 0.04).
Associations between the PD PRS with different histology types of lung cancer are presented in Table S7. An inverse association was found between the PRSNalls and squamous cell carcinoma (ORNalls = 0.94, P Nalls = 8.0 × 10−3). The association with PRSChang was in the same direction, but not significant (ORChang = 0.98, P Chang = 0.42). Stratified analyses by smoking status in lung cancer showed an inverse association in ever smokers (ORChang = 0.96, P PRS‐Chang = 0.086; ORNalls = 0.95, P PRS‐Nalls = 9.6 × 10−3), but not in never smokers (ORChang = 1.07, P PRS‐Chang = 0.28; ORNalls = 1.02, P PRS‐Nalls = 0.73) (see Table S8). However, the interactions between the PD PRSs and smoking status did not reach statistical significance (P PRS‐Chang = 0.097, P PRS‐Nalls = 0.20).
Discussion
In this article, we investigated whether pleiotropy plays a role in the association between PD and cancers using GWAS data from two PD and six cancer consortia. We found significant positive genetic correlations of PD with melanoma and prostate cancer. Cross‐phenotype analyses showed that the PD PRS was associated with a higher risk for breast cancer and a lower risk for ovarian cancer. The ovarian cancer PRS was also associated with a lower risk for PD.
Our finding of a positive correlation of PD with melanoma and prostate cancer is consistent with epidemiological studies reporting positive associations of PD with melanoma, 1 , 10 whereas different directions of associations have been reported between PD and prostate cancer. 1 , 40 The genetic correlation we identified between PD and melanoma (Gcorr = 0.16 [0.04; 0.28]) is consistent with a previous study that used iPDGC and 23andMe data 39 to show a significant correlation of a similar magnitude (Gcorr = 0.17 [0.10; 0.24]). 20 Another study examined the genetic correlation between three neurodegenerative diseases and multiple cancers; analyses for PD were based on iPDGC and 23andMe data and showed a significant positive correlations with melanoma (Gcorr = 0.14, P = 0.044) and prostate cancer (iPDGC: Gcorr = 0.09, P = 0.032; 23andMe: Gcorr = 0.16, P = 0.044) that would not have survived multiple testing correction. 21 The authors also investigated the genetic correlation of PD with breast, ovarian, lung, and thyroid cancers and found no associations. The main difference between these two studies and ours is that, in addition to iPDGC data (excluding 23andMe), we also used data from a completely independent GWAS from the Courage‐PD consortium.
We did not find significant correlations between PD and other cancers. However, the lack of correlation may be because of the fact that LD score allows to highlight only an overall trend of correlation. If shared loci of two diseases are randomly associated in different directions, an overall correlation would be masked by positively and negatively correlated regions that cancel each other out.
We explored the cross‐phenotype PRS association between PD and cancers using two PRSs for PD. This allowed us to compare the results from the PRS proposed by Nalls et al 23 and the previous one proposed by Chang et al. 39 The PRSNalls is more recent and included a higher number of SNPS but was determined in a population composed partly of proxy cases that could have led to some dilution of associations because of a less precise characterization of the disease. Both PD PRSs were associated with a higher risk for breast cancer. The breast cancer PRS was also associated with a higher risk for PD, but the association was no longer significant after correction for multiple testing. In addition, cross‐phenotype analyses showed that the PD‐PRSChang was associated with a lower risk for ovarian cancer. Consistently, the ovarian cancer PRS was also associated with a lower risk for PD. Associations between both PD PRSs with each cancer were consistent, but the association with ovarian cancer reached significance only for the PRSChang. To our knowledge, no published study has previously performed analyses of the cross‐phenotype associations between PD and cancer.
Analyses of the associations between SNPs of the PRSs highlighted in cross‐phenotype analyses showed that the inverse association between PD and ovarian cancer was mostly driven by one SNP in the 17q21.31 region. Three SNPs in this region were positively associated with breast cancer; they were not in LD with BRCA1, which is also located in this region. The gene MAPT in this region, tagged by SNPs of the PD‐PRS, was already known as a potential predictive marker in epithelial ovarian cancer patients treated with paclitaxel/platinum first‐line chemotherapy and as a marker of paclitaxel sensitivity in breast cancer. 1 Also, the gene NSF of the ovarian cancer PRS has already been reported to be associated with PD through the same SNP: rs183211. This gene has also been recently reported as associated with cancer pleiotropy (breast, cervix, lung, melanoma, testis) in a pan‐cancer study. 41 Four other regions from the PD PRS were associated with breast cancer in the same direction (2q11.2, 6p21.32, 16q12.1, 17q23.2) and one region in the opposite direction (17q21.2). The breast cancer PRS was not significantly associated with PD after correction for multiple testing, but the positive association was detected at a suggestive threshold. Sex‐stratified analyses did not show major differences between men and women in the association of the PRS for both ovarian cancer and breast cancer with PD.
We detected another positive association between PD and the PRS for lung cancer that was significant in iPDGC, but not in Courage‐PD; in sex‐stratified analyses, this positive association was present in women only, whereas it tended to be inverse, although not significant, in men. We also found an inverse association between the PD PRSNalls and squamous carcinomas of the lung. Cross‐phenotype analyses of lung cancer stratified by smoking status showed an inverse association in ever smokers, whereas the association was positive in never smokers. These findings are consistent with the facts that squamous carcinomas are known to be the lung cancer histological type with the strongest association with tobacco, 28 , 42 and that smoking rates are lower in women. There was a trend toward a gene–environment interaction that was not statistically significant, possibly because of the small number of never smokers compared with the number of ever smokers and small effect sizes.
Cross‐phenotype PRS analyses in other cancers did not show any association with PD. However, multiple pleiotropic SNPs with different directions of associations may lead to diluting an association with PRSs.
The main strength of our study is that we used the largest GWAS available at the present date for several cancers together with two independent large PD datasets to replicate our findings, while correcting for multiple testing. Our study also has limitations. The size of the GWAS datasets was different for different phenotypes, and for some of them, we did not have access to individual data but rather GWAS summary statistics. The panels of SNPs available in each GWAS were also different, which could affect the results, especially for genetic correlation analysis. Although the NeuroChip array has reduced coverage compared with some other arrays, the tagging variant backbone of about 306,670 SNPs has good genome‐wide resolution and allows to perform genome‐wide imputation; in addition, we retained for our analyses SNPs with good‐quality imputation (r 2 ≥ 0.8). Our analyses are restricted to participants of European descent, and additional studies are needed in other populations. Finally, except for the lung cancer GWAS that performed analyses stratified by smoking, analyses stratified by environmental factors were not available for other cancer GWASs.
Epidemiological studies have identified a complex association between PD and cancers, but the underlying mechanisms remain poorly understood. In addition, epidemiological studies on the relation between neurodegenerative diseases and cancer face a number of methodological difficulties and possible biases, including confounding, diagnostic bias, competing risks, or selective survival. 5 , 6 , 7 Alternatively, as for Mendelian randomization, the genetic approach we used is not affected by confounding, reverse causation, or surveillance biases because genes are randomly assigned at birth and are not influenced by exposures. In addition, we used GWASs for PD and cancer studies that were independent and did not include overlapping participants; hence in the cancer GWAS, the diagnosis was independent of PD, and vice versa. Studies based on a genetic approach are complementary to epidemiological studies and may help understand whether genetic pleiotropy could account for some of the associations highlighted by epidemiological studies. Our results suggest the importance of shared genetic variants between PD and some cancers. These analyses may be followed by analyses of genome‐wide pleiotropy at a SNP, gene, or pathway level to better understand the shared biologic mechanisms between PD and cancer. It would also be interesting to explore additional environmental factors that could interact with pleiotropic genes associated with both PD and cancer. Evidence of pleiotropy between PD and cancer will improve our understanding of the etiology of these diseases and will provide insights into their underlying biology.
Author Roles
Pierre‐Emmanuel Sugier designed and conceptualized the study; analyzed and interpreted the data; drafted and revised the manuscript; and is the guarantor.
Elise A. Lucotte analyzed and interpreted the data and revised the manuscript.
Cloé Domenighetti analyzed and interpreted the data and revised the manuscript.
Matthew H. Law had a major role in the acquisition of data and revised the manuscript.
Mark M. Iles had a major role in the acquisition of data and revised the manuscript.
Kevin Brown had a major role in the acquisition of data and revised the manuscript.
Christopher Amos had a major role in the acquisition of data and revised the manuscript.
James D. McKay had a major role in the acquisition of data and revised the manuscript.
Rayjean J. Hung had a major role in the acquisition of data and revised the manuscript.
Mojgan Karimi performed the quality controls and data analysis and revised the manuscript.
Delphine Bacq‐Daian performed the genotyping and revised the manuscript.
Anne Boland‐Augé coordinated the genotyping and revised the manuscript.
Robert Olaso performed the genotyping and revised the manuscript.
Jean‐françois Deleuze coordinated the genotyping and revised the manuscript.
Fabienne Lesueur had a major role in the acquisition of data and revised the manuscript.
Ausrele Kesminiene had a major role in the acquisition of data and revised the manuscript.
Evgenia Ostroumova had a major role in the acquisition of data and revised the manuscript.
Florent de Vathaire had a major role in the acquisition of data and revised the manuscript.
Pascal Guénel had a major role in the acquisition of data and revised the manuscript.
Ashwin Ashok Kumar Sreelatha had a major role in the acquisition of data, analyzed and interpreted the data, and revised the manuscript.
Sandeep Grove had a major role in the acquisition of data, analyzed and interpreted the data, and revised the manuscript.
Claudia Schulte had a major role in the acquisition of data and revised the manuscript.
Patrick May had a major role in the acquisition of data and revised the manuscript.
Dheeraj R. Bobbili had a major role in the acquisition of data and revised the manuscript.
Milena Radivojkov‐Blagojevic had a major role in the acquisition of data, performed the genotyping, and revised the manuscript.
Peter Lichtner had a major role in the acquisition of data, performed the genotyping, and revised the manuscript.
Andrew B. Singleton performed the genotyping and revised the manuscript.
Dena G. Hernandez performed the genotyping and revised the manuscript.
Connor Edsall performed the genotyping and revised the manuscript.
George D. Mellick had a major role in the acquisition of data and revised the manuscript.
Alexander Zimprich had a major role in the acquisition of data and revised the manuscript.
Walter Pirker had a major role in the acquisition of data and revised the manuscript.
Ekaterina Rogaeva had a major role in the acquisition of data and revised the manuscript.
Anthony E. Lang had a major role in the acquisition of data and revised the manuscript.
Sulev Koks had a major role in the acquisition of data and revised the manuscript.
Pille Taba had a major role in the acquisition of data and revised the manuscript.
Suzanne Lesage had a major role in the acquisition of data and revised the manuscript.
Alexis Brice had a major role in the acquisition of data and revised the manuscript.
Jean‐Christophe Corvol had a major role in the acquisition of data and revised the manuscript.
Marie‐Christine Chartier‐Harlin had a major role in the acquisition of data and revised the manuscript.
Eugénie Mutez had a major role in the acquisition of data and revised the manuscript.
Kathrin Brockmann had a major role in the acquisition of data and revised the manuscript.
Angela B. Deutschländer had a major role in the acquisition of data and revised the manuscript.
Georges M. Hadjigeorgiou had a major role in the acquisition of data and revised the manuscript.
Efthimios Dardiotis had a major role in the acquisition of data and revised the manuscript.
Leonidas Stefanis had a major role in the acquisition of data and revised the manuscript.
Athina Maria Simitsi had a major role in the acquisition of data and revised the manuscript.
Enza Maria Valente had a major role in the acquisition of data and revised the manuscript.
Simona Petrucci had a major role in the acquisition of data and revised the manuscript.
Letizia Straniero had a major role in the acquisition of data and revised the manuscript.
Anna Zecchinelli had a major role in the acquisition of data and revised the manuscript.
Gianni Pezzoli had a major role in the acquisition of data and revised the manuscript.
Laura Brighina had a major role in the acquisition of data and revised the manuscript.
Carlo Ferrarese had a major role in the acquisition of data and revised the manuscript.
Grazia Annesi had a major role in the acquisition of data and revised the manuscript.
Andrea Quattrone had a major role in the acquisition of data and revised the manuscript.
Monica Gagliardi had a major role in the acquisition of data and revised the manuscript.
Hirotaka Matsuo had a major role in the acquisition of data and revised the manuscript.
Akiyoshi Nakayama had a major role in the acquisition of data and revised the manuscript.
Nobutaka Hattori had a major role in the acquisition of data and revised the manuscript.
Kenya Nishioka had a major role in the acquisition of data and revised the manuscript.
Sun Ju Chung had a major role in the acquisition of data and revised the manuscript.
Yun Joong Kim had a major role in the acquisition of data and revised the manuscript.
Pierre Kolber had a major role in the acquisition of data and revised the manuscript.
Bart P.C. van de Warrenburg had a major role in the acquisition of data and revised the manuscript.
Bastiaan R. Bloem had a major role in the acquisition of data and revised the manuscript.
Jan Aasly had a major role in the acquisition of data and revised the manuscript.
Mathias Toft had a major role in the acquisition of data and revised the manuscript.
Lasse Pihlstrøm had a major role in the acquisition of data and revised the manuscript.
Leonor Correia Guedes had a major role in the acquisition of data and revised the manuscript.
Joaquim J. Ferreira had a major role in the acquisition of data and revised the manuscript.
Soraya Bardien had a major role in the acquisition of data and revised the manuscript.
Jonathan Carr had a major role in the acquisition of data and revised the manuscript.
Eduardo Tolosa had a major role in the acquisition of data and revised the manuscript.
Mario Ezquerra had a major role in the acquisition of data, revised the manuscript.
Pau Pastor had a major role in the acquisition of data and revised the manuscript.
Monica Diez‐Fairen had a major role in the acquisition of data and revised the manuscript.
Karin Wirdefeldt had a major role in the acquisition of data and revised the manuscript.
Nancy Pedersen had a major role in the acquisition of data and revised the manuscript.
Caroline Ran had a major role in the acquisition of data and revised the manuscript.
Andrea C. Belin had a major role in the acquisition of data and revised the manuscript.
Andreas Puschmann had a major role in the acquisition of data and revised the manuscript.
Emil Ygland had a major role in the acquisition of data and revised the manuscript.
Carl E. Clarke had a major role in the acquisition of data and revised the manuscript.
Karen E. Morrison had a major role in the acquisition of data and revised the manuscript.
Manuela Tan had a major role in the acquisition of data and revised the manuscript.
Dimitri Krainc had a major role in the acquisition of data and revised the manuscript.
Lena F. Burbulla had a major role in the acquisition of data and revised the manuscript.
Matt J. Farrer had a major role in the acquisition of data and revised the manuscript.
Rejko Kruger obtained funding and supervised the study, had a major role in the acquisition of data, and revised the manuscript.
Thomas Gasser obtained funding and supervised the study, had a major role in the acquisition of data, and revised the manuscript.
Manu Sharma obtained funding and supervised the study, had a major role in the acquisition of data, and revised the manuscript.
Thérèse Truong obtained funding and supervised the study; had a major role in the acquisition of data; conceptualized the study; designed, analyzed, and interpreted the data; drafted and revised the manuscript; and is the guarantor.
Alexis Elbaz obtained funding and supervised the study; had a major role in the acquisition of data; conceptualized the study; designed, analyzed, and interpreted the data; drafted and revised the manuscript; and is the guarantor.
Financial Disclosures
P.‐E.S. received a postdoctoral grant from the France Parkinson patient group. This project received financial support from INSERM Cancer and the “Ligue contre le Cancer”. C.D. is the recipient of a doctoral grant from Université Paris‐Saclay, France. This study used data from the Courage‐PD consortium, conducted under a partnership agreement between 35 studies. The Courage‐PD consortium is supported by the EU Joint Program for Neurodegenerative Disease research (JPND; https://www.neurodegenerationresearch.eu/initiatives/annual-calls-for-proposals/closed-calls/risk-factors-2012/risk-factor-call-results/courage-pd/).
The EPITHYR genome‐wide association analyses were supported by Institut National du Cancer (9533) and Fondation ARC (PGA120150202302). The breast cancer genome‐wide association analyses were supported by the Government of Canada through Genome Canada and the Canadian Institutes of Health Research, the “Ministère de l'Économie, de la Science et de l'Innovation du Québec” through Genome Québec and grant PSR‐SIIRI‐701, the National Institutes of Health (U19 CA148065 and X01HG007492), Cancer Research UK (C1287/A10118, C1287/A16563, and C1287/A10710), and The European Union (HEALTH‐F2‐2009‐223175 and H2020 633784 and 634935). All studies and funders are listed in Michailidou et al. 25
The prostate cancer genome‐wide association analyses are supported by the Canadian Institutes of Health Research, European Commission's Seventh Framework Programme grant agreement no. 223175 (HEALTH‐F2‐2009‐223175), Cancer Research UK grants (C5047/A7357, C1287/A10118, C1287/A16563, C5047/A3354, C5047/A10692, and C16913/A6135), and the National Institute of Health (NIH) Cancer Post‐Cancer genome‐wide association study (GWAS) initiative grant 1U19 CA 148537–01 (the GAME‐ON initiative).
We would also like to thank the following for funding support: Institute of Cancer Research and the Everyman Campaign, the Prostate Cancer Research Foundation, Prostate Research Campaign UK (now PCUK), the Orchid Cancer Appeal, Rosetrees Trust, the National Cancer Research Network UK, and the National Cancer Research Institute (NCRI) UK. We are grateful for support of NIHR funding to the NIHR Biomedical Research Centre at the Institute of Cancer Research and the Royal Marsden NHS Foundation Trust.
The Prostate Cancer Program of Cancer Council Victoria also acknowledges grant support from the National Health and Medical Research Council, Australia (126402, 209057, 251533, 396414, 450104, 504700, 504702, 504715, 623204, 940394, and 614,296), VicHealth, Cancer Council Victoria, Prostate Cancer Foundation of Australia, Whitten Foundation, PricewaterhouseCoopers, and Tattersall's. The PRACTICAL consortium acknowledges the Intramural Program of the National Human Genome Research Institute for their support.
Genotyping of the OncoArray was supported by the National Institutes of Health (NIH) (U19 CA 148537 for ELucidating Loci Involved in Prostate cancer SuscEptibility [ELLIPSE] project and X01HG007492 to the Center for Inherited Disease Research [CIDR] under contract number HHSN268201200008I) and by Cancer Research UK grant A8197/A16565. Additional analytic support was provided by NIH National Cancer Institute (NCI) U01 CA188392 (PI: Schumacher). The International Lung Cancer Consortium (ILCCO) GWAS was supported by the NIH (U19 CA203654 [INTEGRAL]).
Funding for the International Collaborative Oncological Gene‐Environment Study (iCOGS) infrastructure was from the European Community's Seventh Framework Programme under grant agreement 223175 (HEALTH‐F2‐2009‐223175) (COGS), Cancer Research UK (C1287/A10118, C1287/A10710, C12292/A11174, C1281/A12014, C5047/A8384, C5047/A15007, C5047/A10692, and C8197/A16565), National Institutes of Health (CA128978) and Post‐Cancer GWAS initiative (1U19 CA148537, 1U19 CA148065, and 1U19 CA148112—the GAME‐ON initiative), Department of Defense (W81XWH‐10‐1‐0341), Canadian Institutes of Health Research (CIHR) for the CIHR Team in Familial Risks of Breast Cancer, Komen Foundation for the Cure, Breast Cancer Research Foundation, and Ovarian Cancer Research Fund.
The BPC3 was supported by the National Institutes of Health, National Cancer Institute (cooperative agreements U01‐CA98233 to D.J.H., U01‐CA98710 to S.M.G., U01‐CA98216 to E.R., and U01‐CA98758 to B.E.H.; and Intramural Research Program of NIH/National Cancer Institute, Division of Cancer Epidemiology and Genetics).
CAPS GWAS was supported by the Swedish Cancer Foundation (grants 09‐0677, 11‐484, and 12‐823), the Cancer Risk Prediction Center (CRisP; www.crispcenter.org), a Linneus Centre (contract ID 70867902) financed by the Swedish Research Council, and the Swedish Research Council (grant K2010‐70X‐20,430‐04‐3, 2014‐2269).
PEGASUS was supported by the Intramural Research Program, Division of Cancer Epidemiology and Genetics, National Cancer Institute, National Institutes of Health.
This research and work received support from Region Skåne, ALF, Swedish Parkinson Foundation, Swedish Parkinson Academy, MultiPark, a strategic research environment at Lund University (all in Sweden).
A.P. has received funding for travel or speaker's honoraria from the International Parkinson and Movement Disorder Society, International Association of Parkinsonism and Related Disorders, and Swedish Movement Disorder Society; serves as Associate Editor for Parkinsonism and Related Disorders; and has received research support from the Swedish government through funding for clinical research within the Swedish National Health Services (ALF), Region Skåne, Swedish Parkinson Foundation (Parkinsonfonden), Skåne University Hospital research grants, and Swedish Parkinson Academy (all in Sweden).
Appendix
Additional Courage‐PD (Comprehensive Unbiased Risk Factor Assessment for Genetics and Environment in Parkinson's Disease) investigators: S.N. Pchelina (Saint Petersburg, Russia), T. Brücke (Wien, Austria), M.‐A. Loriot (Paris, France), C. Mulot (Paris, France), Y. Koudou (Villejuif, France), A. Destée (Lille, France), G. Xiromerisiou (Larissa, Greece), C. Koros (Athens, Greece), M. Maniati (Athens, Greece), M. Bozi (Athens, Greece), M. Avenali (Pavia, Italy), S. Duga (Milan, Italy), M. Canesi (Milan, Italy), G. Sacilotto (Milan, Italy), M. Zini (Milan, Italy), R. Cilia (Milan, Italy), F. Del Sorbo (Milan, Italy), N. Meucci (Milan, Italy), R. Asselta (Milan, Italy), R. Procopio (Catanzaro, Italy), M. Funayama (Tokyo, Japan), A. Ikeda (Tokyo, Japan), T. Matsushima (Tokyo, Japan), Y. Li (Tokyo, Japan), H. Yoshino (Tokyo, Japan), Z. Landoulsi (Luxembourg, Luxembourg), R. Fernández‐Santiago (Barcelona, Spain), N. Wood (London, UK), and H.R. Morris (London, UK).
Additional ILCCO (International Lung Cancer Consortium) investigators: D. Albanes (Bethesda, MD, USA), M.T. Landi (Bethesda, MD, USA), S. Lam (Vancouver, BC, Canada), A. Tardon (Oviedo, Spain), C. Chen (Seattle, WA, USA), S.E. Bojesen (Copenhagen, Denmark), M. Johansson (Lyon, France), P. Brennan (Lyon, France), A. Risch (Heidelberg, Germany), H. Bickeböller (Goettingen, Germany), H.‐E. Wichmann (Munich, Germany), D. Christiani (Boston, MA, USA), G. Rennert (Haifa, Israel), S. Arnold (Lexington, KY, USA), J.K. Field (Liverpool, UK), S.S. Shete (Houston, TX, USA), L. Le Marchand (Honolulu, HI, USA), O. Melander (Lund, Sweden), H. Brunnström (Lund, Sweden), G. Liu (Toronto, ON, Canada), A. Andrew (Lebanon, NH, USA), L.A. Kiemeney (Nijmegen, the Netherlands), S. Zienolddiny‐Narui (Oslo, Norway), K. Grankvist (Umea, Sweden), N. Cporaso (NIH, Bethesda, MD, USA), A. Cox (Sheffield, UK), P. Lazarus (Spokane, WA, USA), M.B. Schabath (Tampa, FL, USA), and M.C. Aldrich (Nashville, TN, USA).
Additional MMAC investigators: D.T. Bishop (Leeds, UK), J.E. Lee (Houston, TX, USA), M. Brossard (Paris, France), N.G. Martin (Brisbane, QLD, Australia), E.K. Moses (Perth, WA, Australia), F. Song (Tianjin, China), J.H. Barrett (Heidelberg, Germany), D.F. Easton (Cambridge, UK), P.D. Pharoah (Cambridge, UK), A.J. Swerdlow (London, UK), K.P. Kypreou (Athens, Greece), J.C. Taylor (Leeds, UK), M. Harland (Leeds, UK), J. Randerson‐Moor (Leeds, UK), L.A. Akslen (Bergen, Norway), P.A. Andresen (Oslo, Norway), M.F. Avril (Paris, France), E. Azizi (Tel Aviv, Israel), G.B. Scarrà (Genoa, Italy), K.M. Brown (Bethesda, MD, USA), T. Dȩbniak (Szczecin, Poland), D.L. Duffy (Brisbane, QLD, Australia), D.E. Elder (Philadelphia, PA, USA), S. Fang (Houston, TX, USA), E. Friedman (Tel Aviv, Israel), P. Galan (Bobigny, France), P. Ghiorzo (Genoa, Italy), E.M. Gillanders (Baltimore, MD, USA), A.M. Goldstein (Bethesda, MD, USA), N.A. Gruis (Leiden, the Netherlands), J. Hansson (Stockholm, Sweden), P. Helsing (Oslo, Norway), M. Hočevar (Ljubljana, Slovenia), V. Höiom (Stockholm, Sweden), C. Ingvar (Lund, Sweden), P.A. Kanetsky (Tampa, FL, USA), W.V. Chen (Houston, TX, USA), GenoMEL Consortium, Essen‐Heidelberg Investigators, SDH Study Group, Q‐MEGA and QTWIN Investigators, AMFS Investigators, ATHENS Melanoma Study Group, M.T. Landi (Bethesda, MD, USA), J. Lang (Glasgow, UK), G.M. Lathrop (Montreal, QC, Canada), J. Lubiński (Szczecin, Poland), R.M. Mackie (Glasgow, UK), G.J. Mann (Sydney, NSW, Australia), A. Molven (Bergen, Norway), G.W. Montgomery (Brisbane, QLD, Australia), S. Novaković (Ljubljana, Slovenia), H. Olsson (Lund, Sweden), S. Puig (Barcelona, Spain), J.A. Puig‐Butille (Barcelona, Spain), W. Wu (Indianapolis, IN, USA), A.A. Qureshi (Providence, RI, USA), D.C. Whiteman (Brisbane, QLD, Australia), J.E. Craig (Adelaide, SA, Australia), D. Schadendorf (Essen, Germany), L.A. Simms (Indianapolis, IN, USA), K.P. Burdon (Tasmania, TAS, Australia), D.R. Nyholt (Brisbane, QLD, Australia), K.A. Pooley (Cambridge, UK), N. Orr (London, UK), A.J. Stratigos (Athens, Greece), A.E. Cust (Sydney, NSW, Australia), S.V. Ward (Perth, WA, Australia), N.V. Hayward (Brisbane, QLD, Australia), J. Han (Indianapolis, IN, USA), H.J. Schulze (Münster, Germany), A.M. Dunning (Cambridge, UK), J.A. Bishop (Leeds, UK), F. Demenais (Paris, France), and S. MacGregor (Brisbane, QLD, Australia).
Supporting information
Appendix S1. Supporting Information
Acknowledgments
We thank the Breast CancerAssociation Consortium, the Ovarian Cancer Association Consortium, the PRACTICA Lconsortium, CRUK, BPC3, CAPS, PEGASUS for providing summary statistics from GWAS on cancers, and iPDGC for summary statistics from GWAS on PD.
Thérèse Truong and Alexis Elbaz contributed equally to this work.
Additional Courage‐PD (Comprehensive Unbiased Risk Factor Assessment for Genetics and Environment in Parkinson's Disease), International Lung Cancer Consortium (ILCCO), and MMAC investigators are listed in the Appendix.
Where authors are identified as personnel of the International Agency for Research on Cancer/World Health Organization, the authors alone are responsible for the views expressed in this article, and they do not necessarily represent the decisions, policy, or views of the International Agency for Research on Cancer/World Health Organization.
Relevant conflicts of interest/financial disclosures: Nothing to report.
Full financial disclosures and author roles may be found in the online version of this article.
Data Availability Statement
The data that support the findings of this study are available from the corresponding author upon reasonable request.
References
- 1. Zhang X, Guarin D, Mohammadzadehhonarvar N, Chen X, Gao X. Parkinson's disease and cancer: a systematic review and meta‐analysis of over 17 million participants. BMJ Open 2021;11(7):e046329. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 2. Li X, Li W, Liu G, Shen X, Tang Y. Association between cigarette smoking and Parkinson's disease: a meta‐analysis. Arch Gerontol Geriatr 2015;61(3):510–516. [DOI] [PubMed] [Google Scholar]
- 3. Elbaz A, Peterson BJ, Yang P, et al. Nonfatal cancer preceding Parkinson's disease: a case‐control study. Epidemiology 2002;13(2):157–164. [DOI] [PubMed] [Google Scholar]
- 4. Driver JA, Kurth T, Buring JE, Gaziano JM, Logroscino G. Prospective case‐control study of nonfatal cancer preceding the diagnosis of Parkinson's disease. Cancer Causes Control 2007;18(7):705–711. [DOI] [PubMed] [Google Scholar]
- 5. Cui X, Liew Z, Hansen J, Lee PC, Arah OA, Ritz B. Cancers preceding Parkinson's disease after adjustment for bias in a Danish population‐based case‐control study. Neuroepidemiology 2019;52(3–4):136–143. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 6. Hayes‐Larson E, Shaw C, Ackley SF, et al. The role of dementia diagnostic delay in the inverse cancer‐dementia association. J Gerontol, Ser A 2022;77(6):1254–1260. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 7. Ospina‐Romero M, Glymour MM, Hayes‐Larson E, et al. Association between Alzheimer disease and cancer with evaluation of study biases: a systematic review and meta‐analysis. JAMA Netw Open 2020;3(11):e2025515–e2025515. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 8. Mencke P, Hanss Z, Boussaad I, Sugier PE, Elbaz A, Krüger R. Bidirectional relation between Parkinson's disease and glioblastoma multiforme. Front Neurol 2020;11:898. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 9. Filippou PS, Outeiro TF. Cancer and Parkinson's disease: common targets, emerging hopes. Mov Disord 2021;36(2):340–346. [DOI] [PubMed] [Google Scholar]
- 10. Moriarty N, Moriarty J. Highlighting the link between Parkinson's disease and malignant melanoma: a case report and literature review. Eur J Case Reports Intern Med 2019;6(11):1. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 11. Inzelberg R, Flash S, Friedman E, Azizi E. Cutaneous malignant melanoma and Parkinson disease: common pathways? Ann Neurol 2016;80(6):811–820. [DOI] [PubMed] [Google Scholar]
- 12. Jiang ZC, Chen XJ, Zhou Q, Gong XH, Chen X, Wu WJ. Downregulated LRRK2 gene expression inhibits proliferation and migration while promoting the apoptosis of thyroid cancer cells by inhibiting activation of the JNK signaling pathway. Int J Oncol 2019;55(1):21–34. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 13. Xu L, Lin DC, Yin D, Koeffler HP. An emerging role of PARK2 in cancer. J Mol Med 2014;92(1):31–42. [DOI] [PubMed] [Google Scholar]
- 14. Bartek J, Hodny Z. PARK2 orchestrates cyclins to avoid cancer. Nat Genet 2014;46(6):527–528. [DOI] [PubMed] [Google Scholar]
- 15. Warø BJ, Aasly JO. Exploring cancer in LRRK2 mutation carriers and idiopathic Parkinson's disease. Brain Behav 2018;8(1):e00858. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 16. Inzelberg R, Samuels Y, Azizi E, et al. Parkinson disease (PARK) genes are somatically mutated in cutaneous melanoma. Neurol Genet 2016;2(3):e70. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 17. Devine MJ, Plun‐Favreau H, Wood NW. Parkinson's disease and cancer: two wars, one front. Nat Rev Cancer 2011;11(11):812–823. [DOI] [PubMed] [Google Scholar]
- 18. Senkevich K, Bandres‐Ciga S, Yu E, Liyanage UE, Noyce AJ, Gan‐Or Z. No evidence for a causal relationship between cancers and Parkinson's disease. J Parkinsons Dis 2021;11(2):801–809. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 19. Dong J, Gao J, Nalls M, et al. Susceptibility loci for pigmentation and melanoma in relation to Parkinson's disease. Neurobiol Aging 2014;35(6):1512.e5–1512.e10. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 20. Dube U, Ibanez L, Budde JP, et al. Overlapping genetic architecture between Parkinson disease and melanoma. Acta Neuropathol 2020;139(2):347–364. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 21. Forés‐martos J, Boullosa C, Rodrigo‐domínguez D, et al. Transcriptomic and genetic associations between alzheimer's disease, parkinson's disease, and cancer. Cancers 2021;13(12):2990. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 22. Domenighetti C, Sugier PE, Sreelatha AAK, et al. Mendelian randomisation study of smoking, alcohol, and coffee drinking in relation to Parkinson's disease. J Parkinsons Dis 2022;12(1):267–282. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 23. Nalls MA, Blauwendraat C, Vallerga CL, et al. Identification of novel risk loci, causal insights, and heritable risk for Parkinson's disease: a meta‐analysis of genome‐wide association studies. Lancet Neurol 2019;18(12):1091–1102. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 24. Blauwendraat C, Iwaki H, Makarious MB, et al. Investigation of autosomal genetic sex differences in Parkinson's disease. Ann Neurol 2021;90(1):35–42. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 25. Michailidou K, Lindström S, Dennis J, et al. Association analysis identifies 65 new breast cancer risk loci. Nature 2017;551(7678):92–94. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 26. Law MH, Bishop DT, Lee JE, et al. Genome‐wide meta‐analysis identifies five new susceptibility loci for cutaneous malignant melanoma. Nat Genet 2015;47(9):987–995. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 27. Schumacher FR, Al Olama AA, Berndt SI, et al. Association analyses of more than 140,000 men identify 63 new prostate cancer susceptibility loci. Nat Genet 2018;50(7):928–936. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 28. McKay JD, Hung RJ, Han Y, et al. Large‐scale association analysis identifies new lung cancer susceptibility loci and heterogeneity in genetic susceptibility across histological subtypes. Nat Genet 2017;49(7):1126–1132. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 29. Phelan CM, Kuchenbaecker KB, Tyrer JP, et al. Identification of 12 new susceptibility loci for different histotypes of epithelial ovarian cancer. Nat Genet 2017;49(5):680–691. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 30. Truong T, Lesueur F, Sugier PE, et al. Multiethnic genome‐wide association study of differentiated thyroid cancer in the EPITHYR consortium. Int J Cancer 2021;148(12):2935–2946. [DOI] [PubMed] [Google Scholar]
- 31. Bulik‐Sullivan B, Finucane HK, Anttila V, et al. An atlas of genetic correlations across human diseases and traits. Nat Genet 2015;47(11):1236–1241. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 32. Liyanarachchi S, Gudmundsson J, Ferkingstad E, et al. Assessing thyroid cancer risk using polygenic risk scores. Proc Natl Acad Sci U S A 2020;117(11):5997–6002. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 33. Mavaddat N, Michailidou K, Dennis J, et al. Polygenic risk scores for prediction of breast cancer and breast cancer subtypes. Am J Hum Genet 2019;104(1):21–34. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 34. Yang X, Leslie G, Gentry‐Maharaj A, et al. Evaluation of polygenic risk scores for ovarian cancer risk prediction in a prospective cohort study. J Med Genet 2018;55(8):546–554. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 35. König IR, Loley C, Erdmann J, Ziegler A. How to include chromosome X in your genome‐wide association study. Genet Epidemiol 2014;38(2):97–103. [DOI] [PubMed] [Google Scholar]
- 36. Gu F, Chen TH, Pfeiffer RM, et al. Combining common genetic variants and non‐genetic risk factors to predict risk of cutaneous melanoma. Hum Mol Genet 2018;27(3):4145–4156. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 37. Higgins JPT, Thompson SG. Quantifying heterogeneity in a meta‐analysis. Stat Med 2002;21(11):1539–1558. [DOI] [PubMed] [Google Scholar]
- 38. Johnson T. Efficient calculation for multi‐SNP genetic risk scores. 2012.
- 39. Chang D, Nalls MA, Hallgrímsdóttir IB, et al. A meta‐analysis of genome‐wide association studies identifies 17 new Parkinson's disease risk loci. Nat Genet 2017;49(10):1511–1516. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 40. Chen C, Zheng H, Hu Z. Association between Parkinson's disease and risk of prostate cancer in different populations: an updated meta‐analysis. Sci Rep 2017;7(1):1–6. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 41. Rashkin SR, Graff RE, Kachuri L, et al. Pan‐cancer study detects genetic risk variants and shared genetic basis in two large cohorts. Nat Commun 2020;11(1):1–14. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 42. Khuder SA. Effect of cigarette smoking on major histological types of lung cancer: a meta‐analysis. Lung Cancer 2001;31(2–3):139–148. [DOI] [PubMed] [Google Scholar]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Appendix S1. Supporting Information
Data Availability Statement
The data that support the findings of this study are available from the corresponding author upon reasonable request.
