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. Author manuscript; available in PMC: 2024 Jan 1.
Published in final edited form as: Appl Magn Reson. 2022 Oct 15;54(1):59–75. doi: 10.1007/s00723-022-01506-7

Magnetic-Field Dependence of LC-Photo-CIDNP in the Presence of Target Molecules Carrying a Quasi-Isolated Spin Pair

Siyu Li 1, Hanming Yang 1, Heike Hofstetter 1, Marco Tonelli 2, Silvia Cavagnero 1
PMCID: PMC10358788  NIHMSID: NIHMS1913009  PMID: 37483563

Abstract

NMR spectroscopy is well known for its superb resolution, especially at high applied magnetic field. However, the sensitivity of this technique is very low. Liquid-state low-concentration photo-chemically-induced dynamic nuclear polarization (LC-photo-CIDNP) is a promising emerging methodology capable of enhancing NMR sensitivity in solution. LC-photo-CIDNP works well on solvent-exposed Trp and Tyr residues, either in isolation or within proteins. This study explores the magnetic-field dependence of the LC-photo-CIDNP experienced by two tryptophan isotopologs in solution upon in situ LED-mediated optical irradiation. Out of the two uniformly 13C,15N-labeled Trp (Trp-U-13C,15N) and Trp-α-13C-β,β,2,4,5,6,7-d7 species employed here, only the latter bears a quasi-isolated 1Hα-13Cα spin pair. Computer simulations of the predicted polarization due to geminate recombination of both species display a roughly bell-shaped field dependence. However, while Trp-U-13C,15N is predicted to show a maximum at ca. 500 MHz (11.7 T) and a fairly weak field dependence, Trp-α-13C-β,β,2,4,5,6,7-d7 is expected to display a much sharper field dependence accompanied by a dramatic polarization increase at lower field (ca. 200 MHz, 4.7 T). Experimental LC-photo-CIDNP studies on both Trp isotopologs at 1μM concentration, performed at selected fields, are consistent with the theoretical predictions. In summary, this study highlights the prominent field-dependence of LC-photo-CIDNP enhancements (ε) experienced by Trp isotopologs bearing a quasi-isolated spin pair.

Keywords: Hyperpolarization, photo-CIDNP, LC-photo-CIDNP, magnetic field, isotope labeling

1. Introduction

Nuclear magnetic resonance (NMR) spectroscopy is notoriously hampered by low sensitivity, even at the highest currently available applied magnetic fields. While the poor sensitivity of NMR can in principle be overcome by increasing sample concentration, scarce solubility or poor sample availability are often limiting factors. Several approaches have recently been developed to increase the sensitivity of NMR spectroscopy in solution [1]. Among them, chemically [2, 3] and photochemically [47] induced dynamic nuclear polarization stand out for their simplicity and fairly straightforward practical implementation.

At low sample concentration (≤ 1μM), the photochemically induced dynamic nuclear polarization (photo-CIDNP) technique is usually referred to as LC-photo-CIDNP [8, 9]. This approach requires photosensitizer dyes with a long triplet-state lifetime [8, 9]. Both photo-CIDNP and LC-photo-CIDNP share the same “radical pair” mechanism in solution, as illustrated in Fig. 1 [57, 10]. The process involves the collision of the triplet state (T1) of the photoexcited dye with the molecule of interest (e.g., Trp), followed by rapid electron transfer. The latter process, in turn, leads to the transient oxidation of the molecule of interest and to the generation of a radical pair. The fate of the radical pair leads to a crucial spin sorting process, and lies at the origin of the observed nuclear spin hyperpolarization. Specifically, the radical pair undergoes a nuclear-spin-dependent triplet-singlet transition (T-S mixing in Fig. 1) followed by rapid electron transfer and recombination. In the idealized case of a single nuclear spin on the molecule of interest (within the radical pair) this process enriches the spin state bearing the fastest T-S mixing rate. Conversely, the spin state characterized by slower T-S mixing rate undergoes predominantly radical-pair escape followed by paramagnetic relaxation, which virtually equalizes nuclear-spin populations, and radical quenching. The overall process leads to the observed hyperpolarization. Percent polarization P% values achievable by photo-CIDNP and LC-photo-CIDNP in solution are typically lower than other NMR sensitivity enhancement techniques, especially in the solid state [11, 12]. On the other hand, the resulting enhancements lead to the facile detection of extremely dilute (μM – nM) aromatic species in solution.

Fig. 1.

Fig. 1

Schematic representation of the mechanism of photochemically induced dynamic nuclear polarization (photo-CIDNP) in solution. Dye and Trp denote photosensitizer dye and the tryptophan amino acids, respectively. The symbols S0, S1, T1 refer to ground singlet, first excited singlet and triplet states, respectively. T-S denotes a triplet-singlet transition and Dye-Trp+ is the radical pair resulting from the collision between the triplet state of the dye and the tryptophan amino acid. The α and β nuclear spin states of Trp are shown as orange and blue circles. Note that the low-concentration analog of photo-CIDNP, known as LC-photo-CIDNP, shares the same mechanism.

LC-photo-CIDNP is usually carried out in oxygen-free environments [13, 14], and it has recently been proven as a valuable tool for the NMR sensitivity enhancement of solvent-exposed tryptophan (Trp) and tyrosine (Tyr) residues, either in isolation or within proteins [1517].

The replacement of high-power lasers with light-emitting diodes (LEDs) improved accessibility, portability and safety [16]. In combination with the virtual elimination of the recycle delay, LED-mediated LC-photo-CIDNP led to the ultra-rapid detection of 500 nM free Trp and 5 μM SH3 protein via the 13C RASPRINT pulse sequence [16]. More recently, it was realized that selective isotope labeling of Trp, including the replacement of aromatic protons and Hβ atoms with deuterons and the incorporation of a unique 13C at the α position, leads to even higher enhancements [17]. This strategy enabled data collection on 20 nM Trp, corresponding to ca. 3 ng of sample within only 64 scans [17], in the presence of low-micromolar concentrations of reductive radical quenchers [14].

Despite the above advances, the magnetic field dependence of LC-photo-CIDNP has never been explored, to date. This topic is particularly important because of previous theoretical studies on photo-CIDNP in the presence of flavin mononucleotide and Tyr [4]. These investigations showed that, at low applied magnetic fields, higher photo-CIDNP enhancements are expected [4]. Further, experimental photo-CIDNP field dependence investigations on the LOV-domain flavoprotein in the solid state also showed higher enhancements at low field [18]. Larger enhancements at low field (in the presence of specific isotope substitution of the LOV-domain flavin) were also achieved in the liquid state, under conditions where the solid-state-like triplet mechanism dominates [19]. Additional field-dependent photo-CIDNP studies based on the field-cycling technology at high sample concentration were also carried out [2025].

In this work, we address the above gap of knowledge by exploring the magnetic field dependence of 1H-detected 13C LC-photo-CIDNP, at low sample concentration in an oxygen-free environment with a high-photoexcited-triplet-state-dye. We focus on the high-field regime and analyze the phenomenon from both the computational and experimental standpoints. In terms of target molecules, we studied the LC-photo-CIDNP field dependence of the uniformly 13C and 15N labeled Trp (Trp-U-13C15N) and Trp-α-13C-β,β,2,4,5,6,7-d7 isotopologs. Our computational predictions show that Trp-α-13C-β,β,2,4,5,6,7-d7 is expected to display a much sharper field dependence and a much larger polarization increase at lower field (ca. 200 MHz, 4.7 T), relative to the other isotopolog. Interestingly, experimental LC-photo-CIDNP studies on Trp-U-13C15N and Trp-α-13C-β,β,2,4,5,6,7-d7 at 1μM concentration, performed on 400, 600 and 750 MHz (9.4, 14.1 and 17.6 T) spectrometers, are qualitatively consistent with the theoretical predictions.

2. Methods

2.1. Materials.

The fluorescein dye (sodium salt), vitamin C (ascorbic acid, VC), oxygen-scavenging enzymes Aspergillus niger glucose oxidase (GO, Enzyme commission classification code EC 1.1.3.4, freeze-dried powder) and bovine liver catalase (CAT, EC 1.11.1.6, freeze-dried powder) were purchased from MilliporeSigma. Uniformly 13C,15N labeled Trp (Trp-U-13C,15N) (Fig. 2a) was purchased from Cambridge Isotopes Laboratories, Inc. The Trp-α-13C-β,β,2,4,5,6,7-d7 isotopolog (IUPAC name: (S)-2-Amino-3-[(2,4,5,6,7-2H5)-3-indolyl](2-13C,3,3-2H2)propionic acid, Fig. 2a) was prepared and purified as described [17]. Briefly, Trp-α-13C-β,β,2,4,5,6,7-d7 was generated via the Pf TrpB2B9 and Tm LTA enzymes from formaldehyde-2H2 (Cambridge Isotope Laboratories, Inc.), glycine(2-13C) (Cambridge Isotope Laboratories, Inc.), indole-2H7 (CDN Isotopes) in the presence of pyridoxal 5’-monophosphate (MilliporeSigma). The preparation and purification of the Pyrococcus furiosus tryptophan synthase β-subunit 2B9 variant (Pf TrpB2B9) [26] and Thermotoga maritima L-threonine aldolase (Tm LTA, EC 4.1.2.5) enzymes was carried out as described [27].

Fig. 2.

Fig. 2

Description of Trp isotopologs and results of computational predictions. (a) Structure of 13C,15N uniformly labeled Trp (Trp-U-13C,15N) and (S)-2-Amino-3-[(2,4,5,6,7-2H5)-3-indolyl](2-13C,3,3-2H2)propionic acid (Trp-α-13C-β,β,2,4,5,6,7-d7). (b) Plot illustrating the predicted polarization of LC-photo-CIDNP geminate recombination products at the 13Cα position of Trp isotopologs as a function of applied magnetic field (B0). Computer simulations were performed using known g-factors [17, 36] and hyperfine coupling constants [17, 3638] of Fl- and Trp+ (see Supplementary Information for more details).

2.2. Stock solutions.

Stock solutions of Trp-U-13C,15N and Trp-α-13C-β,β,2,4,5,6,7-d7 were prepared upon dissolving the respective solid powders in distilled deionized water. Stock-solution concentrations were measured via a NanoDrop 2000/2000c spectrophotometer (ThermoFisher) using an extinction coefficient of 5,600 M−1 cm−1 at 280 nm. GO (ext. coeff. 267,200 M−1cm−1 at 280 nm) and CAT (ext. coeff. 912,500 M−1cm−1 at 276 nm) for CAT [28] enzyme powders were dissolved in 10 mM potassium phosphate buffer (pH 7.14) and concentrations were assessed by electronic absorption spectroscopy. Enzyme stock solutions were aliquoted, flash-frozen with liquid nitrogen, and stored at −80 °C. Enzyme frozen aliquots were thawed upon incubation in a room-temperature water bath on the same day of the experiment.

2.3. NMR experiments under dark conditions.

The high-concentration dark 13C RASPRINT [16] experiments on Trp-U-13C,15N and Trp-α-13C-β,β,2,4,5,6,7-d7 (Fig. 4) were conducted by diluting isotopolog stock solutions in distilled deionized water followed by addition of D2O to a total 10% v/v. T1 experiments are described in the supplementary information.

Fig. 4.

Fig. 4

LC-photo-CIDNP spectra of Trp isotopologs under dark (LED-off) conditions. Data were collected with the 13C RASPRINT pulse sequence (32 scans, 5 s recycle delay) on concentrated samples (concentrations listed in the figure) in H2O containing 10% D2O (v/v) on NMR spectrometers operating at (a) 400 (b) 600 and (c) 750 MHz.

2.4. NMR experiments under light conditions.

The light 13C RASPRINT [16] experiments involving Trp-U-13C,15N and Trp-α-13C-β,β,2,4,5,6,7-d7 (Fig. 3) were carried out at 1 μM isotopolog concentrations in the presence of 1 μM fluorescein, 2 μM VC, 0.15 μM GO, 0.10 μM CAT, 2.5 mM D-glucose, 10 mM potassium phosphate buffer (pH 7.16), and 10% v/v D2O. VC (Catalog number: ND-2000, ext. coeff. of 6,956 M−1cm−1 at 250 nm, pH-independent isosbestic point) stock solutions were freshly prepared on each experimental day, and concentrations were measured via a NanoDrop 2000/2000c spectrophotometer (ThermoFisher). A 2.3W power source with emission centered at 266 nm (UHP-mic-LED-450) equipped with a 1.0 mm-diameter and 10 m long polymer optical fiber (POF, Prizmatix, Holon, Israel) were used to induce nuclear hyperpolarization. The LED power at the fiber tip (to be inserted into NMR sample tubes) was 0.21 W. Additional details on the LC-photo-CIDNP experimental setup can be found in the literature [14, 16].

Fig. 3.

Fig. 3

LC-photo-CIDNP spectra of Trp isotopologs under light (LED-on) and dark (LED-off) conditions. Data were collected with the 13C RASPRINT pulse sequence (32 scans, 50 ms recycle delay) on 1 μM samples in 10 mM potassium phosphate buffer (pH = 7.14) containing 10% D2O (v/v) on NMR spectrometers operating at (a) 400 (b) 600 and (c) 750 MHz.

2.5. NMR data collection under dark and light conditions.

The 13C RASPRINT [16] pulse sequence was employed for experiments under both dark and light conditions. Temperature was calibrated via a 4 % methanol standard in methanol-d4 at each magnetic field. A 50 ms recycle delay and a 0.2 s optical irradiation time per scan were used under light conditions, while a 5 s recycle delay was used under dark conditions to ensure nearly complete spin-lattice relaxation between scans. This procedure increases experiment duration under dark conditions, yet it ensures that enhancement factors are not artificially inflated due to incomplete longitudinal relaxation under dark conditions.

Experiments at 9.4 T (400 MHz) (Figs. 3a and 4a) were carried out on a Bruker Avance III HD 400 MHz NMR spectrometer equipped with a 5mm BBFO plus Smartprobe, at 24.6°C. Acquisition time (AQ) and total data number of points (TD) were set to 0.2046 s and 2,728, respectively. Data at 14.1 T (600 MHz) were acquired on two separate spectrometers to estimate the error due to individual instruments operating at the same field. Specifically: 600 MHz (I): Bruker Avance III HD 600 MHz equipped with a 5mm Cryoprobe TCI-F {19F/13C/15N} (Figs. 3b and 4b). 600 MHz (II): Bruker Avance III HD 600 MHz equipped with a 5 mm Cryoprobe QXI {1H/31P/13C/15N} (data shown in Supplementary Information (SI)).

Experiments at 17.6 T (750 MHz) were carried on a Bruker Avance III HD 750 MHz spectrometer equipped with a 5 mm Cryoprobe TXI {1H/13C/15N} (Figs. 3c and 4c).

The experiments at both 14.1 and 17.6 T had an AQ of 0.2048 s and a TD of 4,096 points.

2.6. NMR data processing and analysis.

Spectra were processed with the MNova (version 14.2.3) software package upon zero-filling to 65,536 complex points. An exponential-decay window function (with line-broadening set to 10 Hz) was applied before Fourier transform. Each spectrum was processed three times with the same zero-filling and window-function parameters but separate manual phase correction. Baseline correction (polynomial function) and integration were performed on these separate data sets to reduce integration errors. The mean value of the integrals for each experiment was used to determine enhancement factors. Under dark conditions, areas were normalized according to eqn 1 below

normalizedareadark=absoulteintergaldarksampleconcdark/sampleconclight. (1)

This procedure ensured proper assessment of concentration-independent enhancement factors (ε).

2.7. Computational assessment of polarization of LC-photo-CIDNP geminate-recombination products.

For the two isotopologs studied in this work, computational predictions of the polarization of LC-photo-CIDNP geminate-recombination products were carried out upon determining P0 according to eqn 9. The results are shown in Fig. 2b. Note that the plot of Fig. 2b is conceptually consistent with a previously reported plot illustrating the dependence of P0 on Δg [17]. Computer simulations followed procedures imparted by a custom-built Python script (Python v. 3.8, Python Software Foundation). All calculations were run either on a MacOS laptop computer or via the UW-Madison Center for High-Throughput Computing (CHTC) [29, 30]. The simulations neglected natural-abundance 13C (1%), amino 14N and 15N (due to unavailable hyperfine coupling constants) and did not include exchangeable amino protons of both isotopologs. To estimate A values of 2H nuclei in Trp-α-13C-β,β,2,4,5,6,7-d7, we multiplied the A values of all 1H nuclei at a given position by 0.1535, which is the ratio of the gyromagnetic ratios of 2H and 1H. All hyperfine coupling constants used in the computation are listed in Supplementary Table S1.

3. Results and Discussion

3.1. Theoretical predictions on the field dependence of LC-photo-CIDNP as a function of isotope composition of the molecule of interest.

In this work, we explored the effect of isolating one target nuclear spin pair (1Hα-13Cα) from other nearby NMR-active spins carrying high gyromagnetic ratios. The isotope configurations corresponding to this scenario are denoted here as quasi-isolated spin pairs. We targeted the computational prediction of the effect of two limiting isotopologs, uniformly 13C,15N-labeled Trp (Trp-U-13C,15N) and Trp-α-13C-β,β,2,4,5,6,7-d7, on the polarization of LC-photo-CIDNP geminate-recombination products as a function of applied magnetic field (B0). The covalent structure of the two above isotopologs is shown in Fig. 2a.

We conducted computational predictions to probe the LC-photo-CIDNP polarization of geminate-recombination products of the two above isotopologs at 13Cα as a function of B0 based on theoretical considerations by Adrian, Ivanov and others [4, 17, 31, 32], as detailed below. First, we assumed that all Trp molecules undergo electron transfer in solution, upon collision with the photoexcited triplet state of fluorescein(T1Fl), and form triplet-state Trp fluorescein radical pairs TFl-Trp+. The population difference between any given nuclear-spin configurations 1 and 2, corresponding to the geminate recombination product of a freely diffusing radical pair, can be obtained from the relation below [32]

p1-p2=pωTS1τd-ωTS2τd, (2)

where p1 and p2 denote the populations of nuclear-spin configurations 1 and 2, ωTS1 and ωTS2 are the triplet-singlet mixing frequencies of configurations 1 and 2, respectively, and p is a normalization factor ensuring that the sum of all possible configurations is equal to 1. The mathematical form of p is further discussed below. In addition, τd is the average time during which the Fl-Trp+ radical-pair components remain closely associated, yet at a distance preventing orbital overlap, before long-term dissociation. Values of τd were estimated via relation [32].

τd=(RFl-+RTrp+)2DFl-+DTrp+, (3)

where RFl- and RTrp+, are the van der Waals radii of Fl- and Trp+, which were set to be equal to 4.4 Å and 4.2 Å, respectively [33]. In addition, DFl- (4.2 × 10−6 cm2s−1) [34] and DTrp+ (6.592 × 10−6 cm2s−1) [35] denote the translational diffusion coefficients of Fl- and Trp+, respectively. Note that the ωTS of a specific nuclear-spin configuration that undergoes T-S mixing (followed by back-electron transfer/recombination) depends on B0, the g-factors of Fl- and Trp+, and the hyperfine coupling constants of Fl- and Trp+ according to relations

Δg=gFl--gTrp+, (4)
ωTS=12ΔgμBB0+i=0ami,Fl-Ai,Fl--j=0bmj,Trp+Aj,Trp+, (5)

where gFl- and gTrp+ are the g-factors values of Fl- and Trp+, which are known from the literature to be 2.003077 [17] and 2.0027 [36] respectively. In addition, Δg is the difference between the g-factors of Fl- and Trp+. Further, μB is the Bohr magneton, and the summation indexes i and j denote individual nuclei of the Fl- and Trp+ radical-pair components, respectively. The letters a and b denote the total numbers of NMR-active nuclear spins of Fl- and Trp+ minus 1. The parameters m and A (see SI) are the magnetic nuclear-spin quantum number and hyperfine coupling constant of each spin i or j [17, 3638]. We are particularly interested in the 13Cα position of Trp, because of its high hyperfine coupling constant and the known relation between its secondary chemical shift [39] or SSP [40] parameter and protein secondary structure. Upon separating the summation term corresponding to the 13Cα of Trp+ (i.e., the nucleus of interest) in eqn. 5, we get

ωTS,α,χ=12ΔgμBB0+i=0ami,Fl-Ai,Fl--12A0-j=1bmj,Trp+Aj,Trp+, (6)

and

ωTS,β,χ=12ΔgμBB0+i=0ami,Fl-Ai,Fl-+12A0-j=1bmj,Trp+Aj,Trp+, (7)

where, for simplicity, 0 denotes the 13Cα of Trp+ and χ denotes the nuclear spin configuration of all the other spins except for 13Cα. In addition, ωTS,α,χ and ωTS,β,χ are the triplet-singlet mixing frequencies of configurations where 0 is in either the α or β nuclear spin state but the other nuclear spins are in random configurations. Then, the population difference between configurations α,χ and β,χ can be expressed as

pα,χ-pβ,χ=p(ωTS,α,χτd-ωTS,β,χτd). (8)

Note that the polarization of 13Cα of Trp P0 arising from geminate recombination is equal to the sum of all populations with configurations bearing 13Cα in its α spin-state minus the sum of all populations with configurations bearing 13Cα is in β spin-state, according to

P0=pα,χpβ,χ=pτd(|ωTS,α,χ||ωTS,β,χ|). (9)

This relation is justified by the fact that that 13Cα can only assume two nuclear-spin states, either α or β. The numerical value of the normalization factor p should be adjusted to ensure that the sum of the above summations is equal to 1, according to

pα,χ+pβ,χ=pτd(|ωTS,α,χ|+|ωTS,β,χ|)=1. (10)

As a consequence, variations in B0 or specific Trp isotopolog impact the first or the last terms in eqns. 6 and 7, leads to corresponding changes in triplet-singlet mixing frequencies, and population differences between configurations α,χ and β,χ. In summary, given the above treatment, it follows that different isotopologs are expected to induce variations in LC-photo-CIDNP hyperpolarization [41].

We carried out memory-intensive computations applying the above formalism to the prediction of the polarization (P0) of LC-photo-CIDNP geminate recombination products for the 1Hα,13Cα pair of the Trp-U-13C,15N and Trp-α-13C-β,β,2,4,5,6,7-d7 isotopologs in the presence of the fluorescein photosensitizer dye, according to eqn. 9. The results for each of the two isotopologs are shown in Fig. 2b.

Interestingly, the predicted polarization of Trp-α-13C-β,β,2,4,5,6,7-d7 undergoes a dramatic enhancement at low B0. Namely, the expected maximum is at P0=0.148 at 150 MHz (3.5 T). As a comparison, at higher B0, e.g., 750 MHz (17.6 T) the predicted P0 value is P0<0.043, i.e., at least 3.4-fold lower than at the maximum of the field-dependent profile. In contrast, much smaller variations are predicted for the uniformly labeled Trp-U-13C,15N isotopolog (Fig. 2b). For instance, at 150 MHz (3.5 T) the predicted P0 value for Trp-U-13C,15N is more than 7-fold larger than the corresponding value for Trp-α-13C-β,β,2,4,5,6,7-d7. Conversely, at very high field (> ca. 700 MHz or 16.4 T) both isotopologs are expected to exhibit similar behavior.

The above results underscore the importance of LC-photo-CIDNP candidate molecules that carry a quasi-isolated spin pair. The tested Trp isotopolog Trp-α-13C-β,β,2,4,5,6,7-d7, as well as related LC-photo-CIDNP substrates or isotopic substitutions, are expected to display significantly larger LC-photo-CIDNP polarization at low magnetic field. On the other hand, candidate biomolecules that bear lots of nearby NMR-active nuclei with high gyromagnetic ratio in proximity of the site of interest (e.g., the 1Hα,13Cα pair) are more likely to have lots of cancellation effects within the summation elements of eqns 6 and 7, and thereby are more likely to display flatter field-dependence profiles.

In order to place our work in the context of previously published studies, it is interesting to note that somewhat related simulations were carried out by Hore and coworkers in the past [4]. Yet these investigations were performed on flavin mononucleotide (FMN) system that included Tyr, and not Trp, as the molecule of interest [4]. While polarization enhancements at low field were also predicted in this study, the different molecule of interest/dye combination precludes direct comparisons with our work. All other previous field-dependent studies that we are aware of were carried out on the LOV-domain flavoprotein, which carries a built-in photosensitizer and were either done in the solid state [18], or in solution under solid-like conditions [19]. The above features of previous investigations on photo-CIDNP field dependence prevent direct comparisons with our system.

3.2. Experimental determination of LC-photo-CIDNP polarization enhancement factors (ε) and percent polarizations (P%) of Trp isotopologs as a function of field strength.

The predictions of Fig. 2b provided an excellent platform for experimental verification, given that the Trp-U-13C,15N and 13Cα of Trp-α-13C-β,β,2,4,5,6,7-d7 isotopologs are either commercially available, or amenable to in-house preparation via known procedures [17, 27], respectively. We quantitatively probed the polarization enhancements of both Trp isotopologs by determining resonance areas under dark and light conditions using 400, 600 and 750 MHz NMR spectrometers, corresponding to 9.4, 14.1 and 17.6 T applied fields. The known reverse-INEPT-like 13C RASPRINT [16] pulse sequence was employed at both dark and light condition. 13C RASPRINT, which has been specifically designed for LC-photo-CIDNP, enables short in situ hyperpolarization (optical irradiation time = 0.2 s). This pulse sequence was optimized for ultrafast data collection (50 ms recycle delay) in aqueous solution. Optically-driven irradiation, generating LC-photo-CIDNP, is followed by 13C to 1H polarization transfer via reverse INEPT, for efficient detection of 1Hα -13Cα pairs [16]. All experiments under light conditions (i.e., LED-on, Fig. 3) were carried out on 1μM Trp-U-13C,15N and 1μM Trp-α-13C-β,β,2,4,5,6,7-d7, and 32 transients were collected in each case. Under dark (LED-off) conditions, no detectable signal was observed for each of the samples at 1μM concentration (Figs. 3a, 3b and 3c). In order to determine enhancements factors (see below) we collected additional data under dark-conditions at much higher concentrations (1.07 mM for Trp-U-13C,15N, 639.3 μM Trp-α-13C-β,β,2,4,5,6,7-d7). Integral values of the 1Hα resonance were normalized according to eqn. 1. In addition, long (5 s) recycle delays were employed to ensure complete longitudinal relaxation (T1 relaxation) between scans. The LC-photo-CIDNP enhancement factor ε, which we defined as

ε=normalizedareadarkarealight. (10)

The experimental enhancement factor ε of Trp-α-13C-β,β,2,4,5,6,7-d7 at 400 MHz was found to be 515.71 ± 30.19. this value decreased dramatically to 213.07 ± 3.67 and 190.5 ± 20.18 upon increasing the spectrometer frequency to 600 and 750 MHz (Figs. 5a and 5b). In contrast, the ε values of Trp-U-13C,15N only varied from 237.75 ± 21.48 to 152.36 ± 4.65 to 242.25 ± 8.27, at spectrometer frequencies of 400, 600 and 750 MHz, respectively, as shown in Figs. 5a and 5b. These results are in exciting qualitative agreement with the computational data of Fig.2, with the Trp-α-13C-β,β,2,4,5,6,7-d7 isotopolog displaying an high enhancement factor ε>500 at 400 MHz.

Fig. 5.

Fig. 5.

Experimentally determined LC-photo-CIDNP enhancement factors (𝜀) of Trp isotopologs. (a) Bar graph illustrating the polarization enhancement of 13Cα (detected via the 1Hα resonance) of Trp-U-13C,15N and Trp-α-13C-β,β,2,4,5,6,7-d7 for data acquired on spectrometers operating at 400 (24.6°C, n = 6), 600 (24.3°C, n = 3) and 750 (22.7°C, n = 3) MHz. Enhancement factors 𝜀 were determined from the experimental data in Figs 3 and 4 and eqn 10. (b) Table reporting the specific numerical values of the data in panel (a). The letter n denotes the number of experiments. Enhancement factors are reported as avg ± SE.

In addition, we determined thermal-equilibrium percent polarization values at 13Cα of Trp P%,theq to the Boltzmann distribution at each B0 value according to eqn. 11 below. Then, we evaluated the 13Cα percent polarization (P%) from ε and P%,theq according to eqn 12

P%,theq=tanh(γB02kBT), (11)
P=εP%,theq, (12)

where is the Planck constant, kB is the Boltzmann constant, γ is the gyromagnetic ratio (with: γ13C=10.705MHz/T,γ1H=42.576MHz/T) [42], and T is the sample temperature. Temperature calibration was carried out with 4% methanol in methanol-d4 [43].

The resulting P% values of Trp-U-13C,15N and Trp-α-13C-β,β,2,4,5,6,7-d7 are reported in Fig. 6a and 6b. As shown in this figure, the experimentally determined P% values for the two Trp isotopologs are significantly different at 400 and 600 MHz but no significant differences were observed at 750 MHz, based on t-tests with significance = 0.05 (P400MHz=3.69e-5,P600MHz=5.11e-4and P750MHz=0.098). Despite the fact that our experiment-derived P% values are not as striking as the predictions of Fig. 2b, significantly higher values of P% were observed for Trp-α-13C-β,β,2,4,5,6,7-d7 relative to Trp-U-13C, 15N consistent with the computational predictions.

Fig. 6.

Fig. 6.

Experimentally determined LC-photo-CIDNP percent polarization (P%) of Trp isotopologs. (a) Bar graph illustrating the polarization enhancement of 13Cα (detected via the 1Hα resonance) of Trp-U-13C,15N and Trp-α-13C-β,β,2,4,5,6,7-d7 for data acquired on spectrometers operating at 400 (24.6°C, n = 6), 600 (24.3°C, n = 3) and 750 (22.7°C, n = 3) MHz. P% values were determined from the experimental data in Figs 3 and 4 and eqn 12. Thermal polarization values were computationally estimated according to eqn 11. (b) Table reporting the specific numerical values of the data in panel (a). The letter n denotes the number of experiments. Percent polarizations are reported as avg ± SE.

One potential source of error is the fact that all Trp molecules were assumed to lead to the formation of radical pairs, upon collision with T1Fl. This treatment omitted taking into account the kinetics of Fl-Trp+ formation. In addition, theoretical P% values do not include the influence of all the post-TS-mixing kinetic processes collectively referred to as recombination. F-pair polarization was also neglected, due to the very-low sample concentration. Further, our experimental P% values are based on steady-state LC-photo-CIDNP. Therefore, in addition to the above factors, the experiments also include the achievement of steady-state conditions. Theoretical expressions for photo-CIDNP and LC-photo-CIDNP hyperpolarization under steady-state conditions were derived before by Okuno et al. [15, 44]. According to these expressions, steady-state LC-photo-CIDNP is affected by a number of parameters including T1 relaxation, which takes place during continuous optical irradiation. In order to experimentally probe the role of T1, we performed 13C T1 measurements on the Trp-U-13C,15N and Trp-α-13C-β,β,2,4,5,6,7-d7 isotopologs at each experimentally relevant field (400, 600 and 750 MHz). The experimental T1 values are very similar at all fields (Table 1 and SI Fig. S2).

Table 1.

Experimental 13Cα T1 values of Trp-U-13C,15N and Trp-α-13C-β,β,2,4,5,6,7-d7 at 400 MHz, 600 MHz and 750 MHz applied fields. T1 values are reported as avg ± SE (n = 2).

T1 measurements
400 MHz 600 MHz 750 MHz
Trp-U-13C,15N (s) 1.39 ± 0.03 1.35 ± 0.01 1.43 ± 0.03
Trp-α-13C-β,β,2,4,5,6,7-d7 (s) 1.50 ± 0.03 1.48 ± 0.02 1.56 ± 0.02

Therefore, the qualitative comparison of theoretical geminate polarization and experimental steady-state polarization shown in Figs. 2b and 6a is not significantly affected the weak T1-dependence of steady-state polarization. Finally, it is worth considering that signals attained via LC-photo-CIDNP are not linearly proportional to the number of scans due to some dye and sample degradation upon long-term irradiation. Although we added oxygen-scavenging enzymes GO and CAT and reductive radical quencher VC [14] to our samples, to reduce photodegradative events caused by highly reactive singlet O2 [13, 45, 46] and degradation products of the Fl- and Trp+ radicals in solution, the observed cumulative signal was only ca. 70% of the signal expected in the absence of photodamage [14].

In all, enhancement factors ε are in good agreement with the computationally predicted polarization values of Fig.2b, while experimentally determined percent polarizations P% are in acceptable agreement only, especially in terms of the important better performance of Trp-α-13C-β,β,2,4,5,6,7-d7 than the Trp-U-13C,15N isotopolog at 400 MHz.

4. Conclusions

This work focuses on the magnetic-field dependence of LC-photo-CIDNP in solution and compares two tryptophan isotopologs: Trp-U-13C,15N and Trp-α-13C-β,β,2,4,5,6,7-d7. The latter isotopolog, which is the only one that displays a quasi-isolated 1Hα-13Cα spin pair, is predicted and observed to display a sharper field dependence, resulting in higher LC-photo-CIDNP enhancements and percent polarizations at lower field relative to the other isotopolog (Trp-U-13C,15N). These results suggest that LC-photo-CIDNP of Trp isotopologs bearing quasi-isolated spin pairs bear competitive advantages at moderate magnetic fields, corresponding to spectrometer frequencies of ca. 150 MHz.

Supplementary Material

Supplemental Material

Acknowledgments

We thank Clayton Mickles, Clayton Thompson and Hung (Justin) Dang for preparing the enzymes and Trp isotopologs (see Methods). We are grateful to Charles G. Fry for technical assistance with NMR. Some of this research was carried out with the computer resources and assistance by the UW-Madison Center for High Throughput Computing (CHTC) in the Department of Computer Sciences [29, 30].

Funding

This work was funded by the National Institutes of Health (grant R01GM125995 to S.C.). The Bruker Avance III 400 NMR spectrometer was supported by UW Madison Instructional Laboratory Modernization Award. The Bruker Avance III 600 NMR spectrometer was supported by NIH grant S10 OD012245. This study made use of the National Magnetic Resonance Facility at Madison (600 and 750 MHz spectrometers), which is supported by NIH grant R24GM141526. The CHTC is supported by UW-Madison, the Advanced Computing Initiative, the Wisconsin Alumni Research Foundation, the Wisconsin Institutes for Discovery, and the National Science Foundation, and is an active member of the OSG Consortium, which is supported by the National Science Foundation and the U.S. Department of Energy’s Office of Science.

Footnotes

Competing Interests Statement

The authors declare no competing interests.

Supplementary Information

The online version contains supplementary material available at [TBA].

Data Availability

Data Availability The datasets generated during and/or analyzed during the current study are available from the corresponding author upon reasonable request.

References

  • 1.Lee JH, Okuno Y, and Cavagnero S, Sensitivity enhancement in solution NMR: emerging ideas and new frontiers. J. Magn. Reson. 241, 18–31 (2014). 10.1016/j.jmr.2014.01.005 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 2.Bargon J, Fischer H, and Johnsen U, Kernresonanz-emissionslinien während rascher radikalreaktionen. Z. Naturforsch. 22(10), 1551–1555 (1967). 10.1515/zna-1967-1014 [DOI] [Google Scholar]
  • 3.Ward HR and Lawler RG, Nuclear magnetic resonance emission and enhanced absorption in rapid organometallic reactions. J. Am. Chem. Soc. 89(21), 5518–5519 (1967). 10.1021/ja00997a078 [DOI] [Google Scholar]
  • 4.Lyon CE, et al. , Low field CIDNP of amino acids and proteins: characterization of transient radicals and NMR sensitivity enhancement. Mol. Phys. 100(8), 1261–1269 (2002). 10.1080/00268970110113988 [DOI] [Google Scholar]
  • 5.Okuno Y and Cavagnero S, Photochemically induced dynamic nuclear polarization: basic principles and applications. eMagRes 6(2), 283–313 (2017). 10.1002/9780470034590.emrstm1499 [DOI] [Google Scholar]
  • 6.Hore PJ and Broadhurst RW, Photo-CIDNP of biopolymers. Prog. Nucl. Magn. Reson. Spectrosc. 25, 345–402 (1993). [Google Scholar]
  • 7.Kuhn LT, Photo-CIDNP NMR spectroscopy of amino acids and proteins, in Hyperpolarization methods in NMR spectroscopy. (Springer-Verlag; Berlin, Berlin, 2013), pp. 229–300. [DOI] [PubMed] [Google Scholar]
  • 8.Okuno Y and Cavagnero S, Fluorescein: a photo-CIDNP sensitizer enabling hypersensitive NMR data collection in liquids at low micromolar concentration. J. Phys. Chem. B 120(4), 715–723 (2016). 10.1021/acs.jpcb.5b12339 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 9.Lindqvist L, A flash photolysis study of fluorescein. Arkiv for Kemi 16(1–2), 79–138 (1961). [Google Scholar]
  • 10.Hore PJ and Kaptein R, Photochemically induced dnamic nuclear-polarization (photo-CIDNP) of biological molecules using continuous wave and time-resolved methods. ACS Symp. Ser. Am. Chem. Soc 191, 285–318 (1982). [Google Scholar]
  • 11.Ardenkjaer-Larsen JH, et al. , Facing and overcoming sensitivity challenges in biomolecular NMR spectroscopy. Angew. Chem. Int. Ed. 54(32), 9162–9185 (2015). 10.1002/anie.201410653 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 12.Pang ZF, et al. , Fundamentals and applications of NMR hyperpolarization techniques. Acta. Phys. Sin. 36(4), (2020). 10.3866/pku.Whxb201906018 [DOI] [Google Scholar]
  • 13.Lee JH and Cavagnero S, A novel tri-enzyme system in combination with laser-driven NMR enables efficient nuclear polarization of biomolecules in solution. J. Phys. Chem. B 117(20), 6069–6081 (2013). 10.1021/jp4010168 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 14.Yang H, et al. , Enhanced nuclear-spin hyperpolarization of amino acids and proteins via reductive radical quenchers. J. Magn. Reson. 324, 106912 (2021). 10.1016/j.jmr.2021.106912 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 15.Okuno Y, et al. , Laser- and cryogenic probe-assisted NMR enables hypersensitive analysis of biomolecules at submicromolar concentration. Proc. Natl. Acad. Sci. USA 116(24), 11602–11611 (2019). 10.1073/pnas.1820573116 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 16.Yang H, Hofstetter H, and Cavagnero S, Fast-pulsing LED-enhanced NMR: A convenient and inexpensive approach to increase NMR sensitivity. J. Chem. Phys. 151(24), 245102 (2019). 10.1063/1.5131452 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 17.Yang H, et al. , Selective isotope labeling and LC-photo-CIDNP enable NMR spectroscopy at low-nanomolar concentration. J. Am. Chem. Soc, in press (2022). 10.1021/jacs.2c01809 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 18.Ding Y, et al. , Nuclear spin-hyperpolarization generated in a flavoprotein under illumination: experimental field-dependence and theoretical level crossing analysis. Sci. Rep. 9(1), 18436 (2019). 10.1038/s41598-019-54671-4 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 19.Kothe G, et al. , Detecting a new source for photochemically induced dynamic nuclear polarization in the LOV2 domain of phototropin by magnetic-field dependent 13C NMR spectroscopy. J. Phys. Chem. B 118(40), 11622–11632 (2014). 10.1021/jp507134y [DOI] [PubMed] [Google Scholar]
  • 20.Grosse S, et al. , Field dependence of chemically induced dynamic nuclear polarization (CIDNP) in the photoreaction of N-acetyl histidine with 2,2 ‘-dipyridyl in aqueous solution. J. Phys. Chem. A 105(26), 6311–6319 (2001). 10.1021/jp004582i [DOI] [Google Scholar]
  • 21.Ivanov KL, et al. , Investigation of the magnetic field dependence of CIDNP in multinuclear radical pairs. 1. Photoreaction of histidine and comparison of model calculation with experimental data. Mol. Phys. 100(8), 1197–1208 (2002). 10.1080/00268970110111797 [DOI] [Google Scholar]
  • 22.Ivanov KL, et al. , Investigation of the magnetic field dependence of CIDNP in multinuclear radical pairs. Part II. Photoreaction of tyrosine and comparison of model calculation with experimental data. Phys. Chem. Chem. Phys. 5(16), 3470–3480 (2003). 10.1039/b304086k [DOI] [Google Scholar]
  • 23.Korchak SE, et al. , Structure and magnetic resonance parameters of the cation-radicals of methionine as studied by the CIDNP magnetic field dependence. Arkivoc, 121–131 (2004). 10.3998/ark.5550190.0005.814 [DOI] [Google Scholar]
  • 24.Kochling T, et al. , Magnetic Resonance Characterization of One-Electron Oxidized Cyclic Dipeptides with Thioether Groups. J. Phys. Chem. B 120(35), 9277–9286 (2016). 10.1021/acs.jpcb.6b05442 [DOI] [PubMed] [Google Scholar]
  • 25.Pravdivtsev AN, et al. , Importance of polarization transfer in reaction products for interpreting and analyzing CIDNP at low magnetic fields. J. Magn. Reson. 254, 35–47 (2015). 10.1016/j.jmr.2015.02.008 [DOI] [PubMed] [Google Scholar]
  • 26.Buller AR, et al. , Directed evolution mimics allosteric activation by stepwise tuning of the conformational ensemble. J. Am. Chem. Soc. 140(23), 7256–7266 (2018). 10.1021/jacs.8b03490 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 27.Thompson CM, et al. , Modular control of L-tryptophan isotopic substitution via an efficient biosynthetic cascade. Org. Biomol. Chem. 18(22), 4189–4192 (2020). 10.1039/d0ob00868k [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 28.Fasman GD, Handbook of biochemistry and molecular biology. (CRC Press, Cleveland (OH), 1976), p. 183–203 [Google Scholar]
  • 29.Sfiligoi I, et al. The pilot way to grid resources using glideinWMS. in WRI World congress on computer science and information engineering. (2009). [Google Scholar]
  • 30.Pordes R, et al. The open science grid. in 3rd Annual Scientific Discovery through Advanced Computing Conference (SciDAC, Boston, 2007). [Google Scholar]
  • 31.Adrian FJ, Singlet-triplet splitting in diffusing radical pairs and magnitude of chemically induced electron-spin polarization. J. Chem. Phys. 57(12), 5107–+ (1972). 10.1063/1.1678196 [DOI] [Google Scholar]
  • 32.Ivanov KL, et al. , The role of level anti-crossings in nuclear spin hyperpolarization. Prog. Nucl. Magn. Reson. Spectrosc. 81, 1–36 (2014). 10.1016/j.pnmrs.2014.06.001 [DOI] [PubMed] [Google Scholar]
  • 33.Togashi DM, et al. , Investigating tryptophan quenching of fluorescein fluorescence under protolytic equilibrium. J. Phys. Chem. A 113(12), 2757–2767 (2009). 10.1021/jp808121y [DOI] [PubMed] [Google Scholar]
  • 34.Casalini T, et al. , Diffusion and aggregation of sodium fluorescein in aqueous solutions. J. Phys. Chem. B 115(44), 12896–12904 (2011). 10.1021/jp207459k [DOI] [PubMed] [Google Scholar]
  • 35.Longsworth LG, Diffusion measurements, at 25°, of aqueous solutions of amino acids, peptides and sugars. J. Am. Chem. Soc. 75(22), 5705–5709 (1953). 10.1021/ja01118a065 [DOI] [Google Scholar]
  • 36.Kiryutin AS, et al. , 1H and 13C Hyperfine coupling constants of the tryptophanyl cation radical in aqueous solution from microsecond time-resolved CIDNP. J. Phys. Chem. B 111(38), 11221–11227 (2007). 10.1021/jp073385h [DOI] [PubMed] [Google Scholar]
  • 37.Connor HD, et al. , L-tryptophan radical cation electron spin resonance studies: connecting solution-derived hyperfine coupling constants with protein spectral interpretations. J. Am. Chem. Soc. 130, 6381–6387 (2008). [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 38.Shigeya N, et al. , ESR study on fluorescein semiquinone radical. Bull. Chem. Soc. Jpn. 47(9), 2121–2125 (1974). 10.1246/bcsj.47.2121 [DOI] [Google Scholar]
  • 39.Spera S and Bax A, Empirical correlation between protein backbone conformation and Cα. and Cβ. 13C nuclear magnetic resonance chemical shifts. J. Am. Chem. Soc. 113(14), 5490–5492 (1991). 10.1021/ja00014a071 [DOI] [Google Scholar]
  • 40.Marsh JA, et al. , Sensitivity of secondary structure propensities to sequence differences between α- and γ-synuclein: implications for fibrillation. Protein Sci. 15(12), 2795–2804 (2006). 10.1110/ps.062465306 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 41.Janssen GJ, et al. , Observation of the solid-state photo-CIDNP effect in entire cells of cyanobacteria Synechocystis. Photosynth. Res. 104(2), 275–282 (2010). 10.1007/s11120-009-9508-1 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 42.Kubala E, et al. , Hyperpolarized 13C metabolic magnetic resonance spectroscopy and imaging. J. Vis. Exp. (118), 54751 (2016). 10.3791/54751 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 43.Departments BBAPE NMR probes: variable temperature control for NMR probes user manual. (Bruker BioSpin AG, Fällanden, 2012), pp.59 [Google Scholar]
  • 44.Okuno Y and Cavagnero S, Effect of heavy atoms on photochemically induced dynamic nuclear polarization in liquids. J. Magn. Reson. 286, 172–187 (2018). 10.1016/j.jmr.2017.12.001 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 45.Holzer W, et al. , Photo-induced degradation of some flavins in aqueous solution. Chem. Phys. 308(1), 69–78 (2005). 10.1016/j.chemphys.2004.08.006 [DOI] [Google Scholar]
  • 46.Connolly PJ and Hoch JC, Photochemical degradation of tryptophan residues during CIDNP experiments. J. Magn. Reson. 95(1), 165–173 (1991). 10.1016/0022-2364(91)90333-O [DOI] [Google Scholar]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Supplemental Material

Data Availability Statement

Data Availability The datasets generated during and/or analyzed during the current study are available from the corresponding author upon reasonable request.

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