Abstract
Fungal diseases are a leading threat to human health, especially in individuals with compromised immunity. Although there have been recent important advances in antifungal drug development, antifungal resistance, drug-drug interactions and difficulties in delivery remain major challenges. Among its pleiotropic actions, nitric oxide (NO) is a key molecule in host defense. We have developed a flexible nanoparticle platform that delivers sustained release of NO and have demonstrated the platform’s efficacy against diverse bacteria as well as some fungal species. In this work, we investigate the effects of two NO-releasing particles against a panel of important human yeast. Our results demonstrate that the compounds are both effective against diverse yeast, including ascomycota and basidiomycota species, and that NO-releasing particles may be a potent addition to our armamentarium for the treatment of focal and disseminated mycoses.
Keywords: novel, medical mycology, candida, cryptococcus, drug discovery
Introduction
According to the last comprehensive population study in 2013, approximately 2.8% of the United States population was estimated to be immunocompromised (Harpaz et al., 2016), and it is expected this frequency to stay the same or increase due to wider indications for immunomodulators and up trending yearly transplants. While immunocompromised patients are prone to a broad range of infections, invasive fungal infections (IFI) are relatively more common in this population. IFIs carry high morbidity, due to fungal endocarditis and valvular damage, and high mortality, estimated with candidemia to be between 19 to 40% (Kullberg & Arendrup, 2015; Liu & Nosanchuk, 2020; Morgan et al., 2005). Among Candida species, there are primary resistance and acquired antifungal resistant mechanisms such as drug target overexpression or alteration and drug efflux pump overexpression (Berkow & Lockhart, 2017). On the other hand, Cryptococcus neoformans is innately resistant to echinocandins and reports of azole resistance complicating treatment course have been described (Feldmesser et al., 2000; Mpoza et al., 2017). Mold pathogens’ resistance mechanisms exhibited similar mechanisms in Aspergillus fumigatus, while Sporothrix species also utilizes melanin (Berger et al., 2017; Waller et al., 2021). Given the difficulties with treatment of these diverse mycoses, researchers are investigating new therapeutic agents in attempts to keep pace with fungal resistance evolution.
Nitric Oxide (NO) is a lipophilic, diatomic molecule that serves various functions within the body. Pertaining to the immune system, innate immunity utilizes NO with cidal or static effects in response to pathogen invasion (De Groote & Fang, 1995). Endogenous NO is produced via inducible NO synthase activity upon L-arginine (O W Griffith & Stuehr, 1995). In 2008, a silane-based hydrogel nanoparticle (NP) that allows for steady nitric oxide (NO) release was created in which the NPs are NO donors via thermal reduction of nitrites by glucose (Friedman et al., 2008). Formulations of the silicone-based compound were highly effective against a select set of pathogens such as methicillin-resistant Staphylococcus aureus (MRSA), Candida albicans and Pseudomonas aeruginosa under planktonic or biofilm growth conditions (Ahmadi et al., 2016; Duong et al., 2014; Han et al., 2009; Macherla et al., 2012; Martinez et al., 2009; Mihu et al., 2016; Mihu et al., 2010). The efficacy of the NPs has been further tested and shown to be potently active against a range of Gram-positive and Gram-negative bacteria, including strains that were resistant to common antibiotics (Friedman et al., 2011). The NP platform is flexible, allowing for the incorporation of compounds such as S-Nitrosothiol (SNO) and N-acetylcysteine (NAC). SNO was found to improve the stability of the NP while keeping the effects of NO (Al-Sa’doni & Ferro, 2000; Al-Sa’doni & Ferro, 2004; Hornyák et al., 2012; Hu & Chou, 2006; Richardson & Benjamin, 2002). SNO goes through S-transnitrosation, where NO is transferred from one thiol to another thiol-containing surface on intracellular or plasma proteins (Nacharaju et al., 2012).
In 2012, the NP platform was further optimized to encapsulate NAC-SNO forming NAC-SNO-NP to achieve a slow sustained production of NO and NAC associated products (Nacharaju et al., 2012). Like NO, NAC also demonstrates antimicrobial properties, particularly exhibiting anti-mycobacterial and anti-biofilm properties (Amaral et al., 2016; Costa et al., 2017; De Groote & Fang, 1995; Moon et al., 2016; Parry & Neu, 1977). We have recently tested NAC-SNO-NP’s antifungal activities against Candida auris, where it effectively eradicated planktonic C. auris while also exhibiting anti-biofilm activities (Cleare LG, 2020). The compound was also tested in a murine burn model that demonstrated no obvious cytotoxicity on histology (Landriscina et al., 2015). In 2018, Abuzeid et al developed a porous organosilica microparticles (MP) that contained SNO (SNO-MP) that exhibited similar NO release and antibacterial effects (Abuzeid et al., 2018). This MP also did not display cytotoxicity at 5 and 10 mg/mL to sinonasal epithelial cells (Li et al., 2022).
Thus, in this study, we tested two S-nitrosothiol containing hydrogel-based particles, NAC-SNO NPs and SNO-MPs at concentrations established with testing of C. albicans and C. auris. We tested these compounds against additional Candida species and C. neoformans as well as several Sporothrix species, which cause subcutaneous infections. Historically, S. schenckii was considered as one species until Marimon et al demonstrated that it is a complex made up of S. mexicana, S. schenckii sensu stricto, S. brasiliensis, and S. globosa. The latter three are known to be associated with infections in humans (Marimon et al., 2007). This study significantly expands the study of NO-releasing particles against important human pathogens, including Sporothrix spp. The work further demonstrates the value of expanding efforts to harness NO-releasing compounds as broad-spectrum antifungals for cutaneous, subcutaneous, and disseminated mycoses, including biofilm associated disease.
Material and Methods
Preparation of Sol-Gel
The sol-gel was prepared with tetramethylorthosilicate (TMOS), as described (Brinker et al., 1982; Girish et al., 2019).Briefly, 3 mL of TMOS were hydrolyzed by 0.37 mL of 40 mM HCl in the presence of 2.5 mL MeOHat 60 °C for 1.5 h. This mixture was diluted with 200 μL of water and 1 mL of similarly hydrolyzed 3-aminopropyltrimethoxysilane (APTS). APTS introduces amino groups into the matrix and promoted sustained release of the enclosed contents in our previous studies (Brinker et al., 1982). The polymerization of this hydrolyzed TMOS was carried out at 40 °C, and a clear gel formed within 30 min.
Synthesis of NAC-SNO-NP
The synthesis of the NAC-SNO-NP using sol-gel was previously described (Cleare LG, 2020). In brief, two grams of sol-gel were mashed and cooled on ice. NAC-SNO was prepared by mixing 900 μmol of nitrite and 1080 μmol of NAC, then cooled on ice. Two ml of freshly made NAC-SNO were added to the measured mashed sol-gel. The mixture was mixed on a lab rotator for 3 h at 4 °C. The mixture was then centrifuged at 1900 × g for 5 min, the supernatant separated, and the particles lyophilized. The dried powder was ground into finer particles with a mortar and pestle (NAC-SNO-NP). The NAC-SNO-NPs were stored in aliquots at −80 °C. The final concentration of NAC-SNO in NP was 1.2 μmol/mg. The concentration of NAC in the particles was not determined. The particle size ranged from 200 to 2000 nm, as determined by dynamic light scattering (Cleare LG, 2020). NO and NAC-SNO release profiles were measured as described (Cleare LG, 2020) using an NO analyzer (Sievers 280i; GE Instruments, Boulder, CO, USA). The NAC-SNO-NP NO release profile exhibits a logarithmic decay with rapid release of NO particles at 4 parts per million (ppm) then quickly dissipates to approximately 2.5 ppm by 1 hour, but sustains 1.7 ppm to the end of 280 min experiment (Cleare LG, 2020).
Synthesis of SNO-microparticles (SNO-MPs)
SNO-MPs were synthesized as described (Abuzeid et al., 2018). In brief, an organosilica sol-gel monolith was formed containing many covalently attached nitrosated thiol groups. Hydrolyzed trimethyl orthosilicate, hydrolyzed/nitrosated mercaptopropyl-trimethoxysilane, polyethylene glycol, and sodium phosphate were mixed and maintained at room temperature to form a spanning network of siloxane (Si-O-Si) linkages through condensation. The resultant porous sol-gel monolith was lyophilized, dry-milled, and then pestled to a micron-sized powder with particle diameters of 5 to 10 μm (Abuzeid et al., 2018). Blank MPs incapable of NO release (B-MP) were prepared by performing the aforementioned steps, with the exception of nitrosation.
Nitrosation of SNO-MP
Un-nitrosated (blank) SNO-MP were measured out and suspended in 1 ml of sterile deionized water via vortex for 30 seconds then placed on ice. Five Molar of sodium nitrite were prepared with 345 mg of sodium nitrite in 1 ml of de-ionized water then stored at 4 °C, replaced every 7 days. Cold 5M sodium nitrite were added to the SNO-MP water suspension at a ratio of 0.967 μl of sodium nitrite for every 1 mg of SNO-MP. The new solution was then vortexed for 30 seconds, and 1M of cold HCl was then added. The solution turned pink immediately, indicative of NO presence, and the solution was vortexed for 30 seconds to ensure complete mixing. Nitrosated SNO-MPs were then spun down with a tabletop centrifuge. The supernatant was decanted, then washed with another 1 ml of deionized water. Finally, the product was suspended in cold minimal media with 5 % fetal bovine serum (FBS; Atlanta Biologicals) to achieve the desired particle concentration. NO kinetics were described previously (Abuzeid et al., 2018). In brief, NO analyzer (Sievers NO Analyzer 280i; GE Analytical Instruments, Boulder, CO) was used. NO flux peaked at 1.8 nmol/mg/min within first 10 minutes, then followed a logarithmic decay and sustained a 0.4 nmol/mg/min for approximately 64 hours.
Planktonic culture preparation
Candida albicans SC5314 (ATCC MYA-2876), Candida parapsilosis ATCC22019, Candida krusei ATCC6258, and Cryptococcus neoformans H99 (ATCC 208821) were stored at −80 °C. Aliquots were removed from the frozen vials and cells were cultivated in Sabouraud Dextrose (SD) broth then seeded onto SD agar plates. These plates were then stored at 4 °C and renewed on a biweekly basis. Prior to each experiment, one colony was picked and then inoculated in 10 ml of SD broth and incubated overnight at their respective temperatures (Table 1) on a rotator at 200 rpm.
Table 1.
Organism | Plating Agar/ Planktonic Media | Incubation Temperature (°C) |
---|---|---|
Candida albicans SC5314 | SD | 30 |
Candida parapsilosis ATCC22019 | SD | 30 |
Candida krusei ATCC6258 | SD | 30 |
Cryptococcus neoformans H99 | BHI | 37 |
Sporothrix schenckii 1099–18 | BHI | 35 |
Sporothrix globosa CFP1021 | BHI | 35 |
Sporothrix brasiliensis CFP0551 | BHI | 35 |
Sporothrix schenckii 1099–18, Sporothrix globosa CFP1021, and Sporothrix brasiliensis CFP0551 were stored at −80 °C. The Sporothrix isolates were acquired from a fungal culture collection maintained at Fundação Oswaldo Cruz, Brazil. Cells removed from the frozen stock were cultivated in SD broth then seeded onto SD agar plates. Conversion to the yeast form was performed on Brain Heart Infusion (BHI) agar incubated at 35 °C. These plates were then stored at 4 °C and renewed monthly. Prior to each experiment, one colony was inoculated in 10 ml BHI medium and incubated overnight at their respective temperatures (Table 1) on a rotator at 200 rpm.
Planktonic cells viability and treatment
After washing with phosphate-buffered saline (PBS), the targeted fungal cells were suspended in chemically defined minimal media (20 mg/mL of thiamine, 30 mM glucose, 26 mM glycine, 20 mM MgSO4·7H2O, and 58.8 mM KH2PO4) supplemented with 5% FBS. Cell concentrations were measured via hemocytometer and solutions were diluted to make a cell suspension at 2 × 106 cells/ml from which 100 μl were added to round bottomed 2 ml test tubes. One glass bead (1× 4 mm) was added to each tube to reduce particle sedimentation. For each tube, 100 μl of 10 mg/mL and 20 mg/mL were added to achieve either a 5 mg/mL or 10 mg/mL final particle concentration, respectively. Concentrations are chosen based on previous in vitro studies with associated NO release kinetics (Abuzeid et al., 2018; Cleare LG, 2020). Cell-particle suspensions were incubated in the dark, at the desired temperature (Table 1) for 24 hours, rotating at 200 rpm.
Biofilm viability and treatment
Individual colonies of C. albicans SC5314 were picked from SD agar and inoculated into SD broth overnight at 30 °C on a rotator at 200 rpm. Culture suspensions were spun down 2500 rpm at 7 minutes, washed with PBS twice and suspended with minimum media (MM) with 5% FBS. The suspension was then diluted 1:500 in formalin, and cell counts were done via hemocytometer. Cells were then diluted to 106 cells/ml. 200 μl of said dilution were placed in a well of a 96 flat bottom plate and then incubated for 24 hours at 30 °C. The supernatant was carefully replaced with 200 μl of MM with 5% FBS with another 24 hours of incubation. The supernatant was then replaced again without disruption of the formed biofilm with 200 μl of appropriate concentration of blank or nitrosated particles and incubated at 30 °C for 24 hours in the dark. Biofilms were disrupted via pipetting, diluted, and plated onto agar plates for colony-forming units (CFU) counting.
Measuring Planktonic and Biofilm Viability by CFU Killing Assay
Treatment groups for each pathogen included 2 arms (NAC-SNO-NP and SNO-MP) where each arm had no particle (control), blank particles, or NO-loaded particles at 5 mg/mL or 10 mg/mL, suspended in previously defined MM with 5% FBS. Blank particles consisted of NP and MP scaffolding without the addition of NAC, NAC-SNO, or SNO. Each experiment was done in triplicates, and each experiment was repeated at least 3 times. There were at least 9 data points per particle per pathogen. After 24 hours of incubation with particles, the suspensions of planktonic cultures were serially diluted and plated onto agar plates (see Table 1). The plates were incubated at 37 °C for at least 48 hours until colonies become countable for CFU.
Surviving Colony susceptibility test
To rule out yeast cells developing de novo resistance in biofilm conditions in the presence of the 10mg/ml SNO-MP, we assessed C. albicans SC5314 biofilm viability through picking one surviving colony for clonal expansion for repeat susceptibility testing. The colony was then cultivated overnight in SD broth and then seeded onto SD agar plate, which was then stored at 4°C for 2 weeks. Prior to each experiment, one colony was picked and then inoculated in 10ml SD broth overnight at 30°C on a rotator at 200 rpm. SNO-MP was then tested following planktonic viability and treatment protocol previously described.
Statistical Analysis
All graphs present average and S.E.M. relative to at least 3 independent experiments. Statistical analysis was performed using GraphPad Prism (Version 9, GraphPad Software, La Jolla California, USA). One-way ANOVA, followed by Bonferroni’s multiple comparison test was used to analyze the data. Statistical significance was set at the standard p < 0.05, and * = p < 0.05, ** = p < 0.01, *** = p < 0.001, and **** = p < 0.0001.
Results
Planktonic cells of C. albicans were similarly killed by both NAC-SNO-NP and SNO-MP and blanks from both particles had no effect on the cells (Figure 1A). The same pattern was observed for biofilms treated with SNO-MP. For NAC-SNO-NP however, the biofilm, 10 mg/mL of NAC-SNO-NP particle concentration was markedly more effective than 5 mg/mL, whereas this lower concentration sowed similar effect as blank particles that curiously were able to inhibit the viability of C. albicans cells in the biofilm (Figure 1B). The SNO-MP experiments demonstrated that both concentrations of the MP reduced C. albicans CFUs (Figure 1b). There were significant reductions starting at 5 mg/mL concentration with CFU formation 4.9 % and 1.9 % of control for planktonic and biofilm conditions, respectively. At 10 mg/mL, SNO-MP reduced growth to 2.4% of control for planktonic and eliminated 100% of yeast cells under the biofilm condition. To demonstrate that the few surviving colonies from the 10 mg/mL SNO-MP-treated biofilm remained susceptible to the compound, cells from surviving colonies were treated under planktonic condition and the SNO-MP efficiently killed the cells (Figure 1c). These results suggest that both NAC-SNO-NP and SNO-MP are efficient against C. albicans grown in planktonic and biofilm cultures, and surviving cells from treated biofilm do not become resistant to SNO-MPs.
Planktonic yeast cells from non-albicans species of C. krusei (Figure 2A) and C. parapsilosis (Figure 2B) were killed by both the NAC-SNO-NP and SNO-MP, at both concentrations 5 mg/mL and 10 mg/mL each. There were no differences between treatment concentrations and particle platforms as the treatments eradicated all yeast cells. However, we observed an interesting increase in viability in both species treated with blank MPs when compared to their control conditions.
The incubation with particles from both platforms and in both concentrations induced death of planktonic cultures of C. neoformans (Figure 3). As observed in C. albicans biofilms, treatment of C. neoformans planktonic cultures with blank NPs partially inhibited growth.
The NO-releasing compounds were lethal to S. globosa (Figure 4A). Although the SNO-MP eradicated S. schenckii and NAC-SNO-NP reduced growth, the changes were not significantly different from controls, likely due to the low growth of the strain (Figure 4B). Of note, there were marked variations in S. schenckii across the experiments resulting in large variance, such that the treatments were not statistically different than controls, but no cells were detected in either concentration of SNO-MP or for the vast majority of 10 mg/mL treatment with NAC-SNO-NP (Figure 4b). On the other hand, S. brasiliensis was resistant to the 5 mg/mL concentration of NPs but susceptible to the other treatments (Figure 4C). As observed for non-albicans species of Candida, blank NP induced growth of S. globosa and S. brasiliensis, and blank MPs induced growth of S. globosa and S. schenckii.
Discussion
Both the NPs and MPs exhibited strong antifungal activities against planktonic C. albicans, C. krusei, C. parapsilosis, and C. neoformans, and against C. albicans biofilms. We chose C. albicans to study the particles’ effect in the setting of biofilm growth as it exhibits a heterogenous structure composed of robust extracellular polysaccharide matrix with blastophores and hyphae (Chandra et al., 2001). On the other hand, C. parapsilosis forms biofilm that has minimal extracellular matrix (ECM) made primarily from clusters of yeast cells (Lattif et al., 2010). C. krusei biofilm composition has been described as thick with ECM with embedded pseudohyphal forms of the organism (Chandra & Mukherjee, 2015). Cell populations in biofilm are metabolically different from their planktonic counterparts with biofilm-associated up-regulation of efflux pump genes, quorum-sensing molecules, and surface contact factors (Brinker et al., 1982). Our prior studies demonstrated that 5 mg/mL NO-NP significantly reduced C. albicans’ biofilm but did not eliminate the cells (Ahmadi et al., 2016), and this is consistent with our study (Fig. 1b). Notably, SNO-MP showed great antifungal activity on biofilm at 5 mg/mL concentration and virtually 100% elimination at 10 mg/mL. The surviving colonies from biofilms treated with 10 mg/mL of SNO-MP were susceptible to the same treatment once re-cultivated in a planktonic setting, suggesting that some cells were protected by ECM or dead yeast from the NO, but that true resistance did not occur. Thus, a re-exposure to the SNO-MPs would be effective in eradicating the yeast. More experiments should be done to further clarify the survival mechanism of yeasts in biofilm against NO generating particles.
Prior work has shown that C. neoformans can be eliminated via NO mediated killing (Ghosn et al., 2006), and our experiments demonstrated that both the NP and MP are viable platforms that can deliver sufficient concentrations of NO to induce clearance of the pathogen in vitro. Preliminary in vivo data involving hamsters hint that NO particle platforms could be safely used systemically, albeit there was a decrease in mean arterial pressure (MAP) (Nacharaju et al., 2012). Given that C. neoformans meningitis remains a cause of high mortality and morbidity in patients with AIDS, and the first line treatment of liposomal amphotericin B and flucytosine (Perfect et al., 2010) often carry terrible toxicity, our particle platforms could be explored as alternative or additive therapeutic options.
In murine models, S. brasiliensis seems to be the most virulent of the Sporothrix species as it causes mortality at a low inoculum concentration. In contrast, S. schenckii induces mortality at high inoculum, while mice usually survive from S. globosa infection. Mice infected with S. brasiliensis displayed the greatest infiltration of fungal cells (Arrillaga-Moncrieff et al., 2009). In Brazil, there has been outbreaks of feline sporotrichosis with associated high numbers of human infections in Rio de Janeiro, with majority of the patients reported to have had contact with cats (Barros et al., 2011; Barros et al., 2004; Schubach et al., 2008). The feline-transmitted sporotrichosis has been caused by S. brasiliensis (Sanchotene et al., 2015). Itraconazole remains as the first line treatment, but it interacts with many drugs and cannot be used during pregnancy (Kauffman et al., 2007), suggesting that a non-azole treatment could be a good alternative to this azole. The NO-releasing MP and NP particles demonstrated activity against Sporothrix species. Both particles eradicated S. globosa. For S. brasiliensis, the SNO-MP had greater efficacy than the NAC-SNO-NP at 5 mg/mL concentration, but both particles achieved complete clearance at the higher concentration. Both particles reduced the growth of S. schenckii, although the controls had low growth, which contributed to their statistical non-significance.
The blank MPs induced growth of S. globosa and S. schenckii, but they did not show activity against the other tested fungi. The blank NPs also induced growth in non-albicans Candida species and S. globosa and S. brasiliensis, but they inhibited growth of C. albicans (biofilm) and C. neoformans. These alterations in growth may be from a yet unknown interference between particles and cells, such as stress responses from contact with the particles or other effects due to the particles’ material; although there is no known effect from the sol-gel that NAC-SNO-NP or SNO-MP were derived from on microbe growth. Nevertheless, it is important to mention that although the blank particles promoted fungal growth, the nitrosation process negated this growth effect and instead resulted in fungal death.
In conclusion, we have demonstrated that both NAC-SNO-NP and SNO-MP have potent antifungal activity against a variety of pathogenic fungal organisms, such as Candida spp, Sporothrix spp, and C. neoformans. At this stage, these compounds are mainly tested in vitro studies, thus side effects observed in vivo experiments are quite limited. However, other NO generating compounds have been shown to lower blood pressure in mice, which can theoretically translate to our platform as well (Garcia et al., 2008). On the other hand, the NO-releasing compounds’ antifungal effects are quite notable, and this work expands therapeutic potential of these platforms and supports future work to translate these NO-releasing particles from the bench to the bedside.
Highlights.
Nitric oxide-loaded particles have antifungal properties
NO-releasing systems can be associated with nanoparticles and microparticles
The NO-loaded particles are effective against planktonic ascomycetes and basidiomycetes species
Candida albicans biofilm cells are susceptible to the NO-loaded particles
Acknowledgements
This article is part of the “Fungal growth, development, and stress responses” special issue for the XIII International Fungal Biology Conference (IFBC) & IV International Symposium on Fungal Stress (ISFUS), which is supported by the Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP) grant 2021/13614-3 and the Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES) grant 88887.680665/2022-00. J.D.N. and D.Z.M. were partially supported by NIH R21 AI156104-01. R.A.P. was partially supported by Programa Jovens Pesquisadores (INI/Fiocruz), grant number INI-003-FIO-19-2-7, and CAPES 88887.372494/2019-00. L.B.R.S. was supported by BEPE FAPESP 2019/20622-2.
Footnotes
Declarations of interest
The authors have no conflicts to declare.
Declaration of interests
The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.
CRediT author statement.
Sichen Liu: methodology, formal analysis, investigation, writing-original draft, writing – review & editing Daniel Zamith: methodology, visualization, writing – review & editing Rodrigo Almeida-Paes: investigation Leandro Buffoni Roque da Silva: investigation Parimala Nacharaju: resources Joshua D. Nosanchuk: conceptualization, methodology, resources, writing – review & editing, supervision, funding acquisition.
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