Table 2.
Transcriptomic datasets used as test data sets in class prediction analysis.
| Accession Number |
Repository | Platform | Sample Type | Number of Samples (ALS/Controls) | References |
|---|---|---|---|---|---|
| GSE56808 | GEO | Affymetrix Human Genome U133 Plus 2.0 Array | Fibroblasts | 12 (6/6) |
[47] |
| GSE68240 | GEO | Agilent-028004 SurePrint G3 Human GE 8x60 K Microarray | Fibroblasts | 6 (3/3) |
[46] |
| GSE112680 | GEO | Illumina HumanHT-12 V4.0 expression beadchip | Whole blood | 301 (164/137) |
[15] |
| GSE112676 | GEO | Illumina HumanHT-12 V3.0 expression beadchip | Whole blood | 741 (233/508) |
[14,15] |
| E-TABM-940 | ArrayExpress | Affymetrix GeneChip Human Genome U133 Plus 2.0 | Whole blood | 85 (57/28) |
[48] |
| E-MTAB-2325 | ArrayExpress | Agilent-014850 Whole Human Genome Microarray 4x44 K | Motor cortex | 41 (31/10) |
[40] |