Abstract
Although alveolar macrophages (AMs) play important roles in preventing and eliminating pulmonary infections, little is known about their regulation in healthy animals. Since exposure to LPS often renders cells hyporesponsive to subsequent LPS exposures (“tolerant”), we tested the hypothesis that LPS produced in the intestine reaches the lungs and stimulates AMs, rendering them tolerant. We found that resting AMs were more likely to be tolerant in mice lacking acyloxyacyl hydrolase (AOAH), the host lipase that degrades and inactivates LPS; isolated Aoah-/- AMs were less responsive to LPS stimulation and less phagocytic than were Aoah+/+ AMs. Upon innate stimulation in the airways, Aoah-/- mice had reduced epithelium- and macrophage-derived chemokine/cytokine production. Aoah-/- mice also developed greater and more prolonged loss of body weight and higher bacterial burdens after pulmonary challenge with Pseudomonas aeruginosa than did wildtype mice. We also found that bloodborne or intrarectally-administered LPS desensitized (“tolerized”) AMs while antimicrobial drug treatment that reduced intestinal commensal Gram-negative bacterial abundance largely restored the innate responsiveness of Aoah-/- AMs. Confirming the role of LPS stimulation, the absence of TLR4 prevented Aoah-/- AM tolerance. We conclude that commensal LPSs may stimulate and desensitize (tolerize) alveolar macrophages in a TLR4-dependent manner and compromise pulmonary immunity. By inactivating LPS in the intestine, AOAH promotes antibacterial host defenses in the lung.
Author summary
AOAH is the host lipase that degrades and inactivates Gram-negative bacterial lipopolysaccharides (LPSs). AOAH is required for recovery from LPS-induced macrophage tolerance. Expressed in the gut, AOAH inactivates microbiota-derived LPS. In this study we found that AOAH-deficient mice were less able to contain pulmonary Pseudomonas aeruginosa infection than were control wildtype mice. Alveolar macrophages (AMs) from Aoah-/- mice were hypo-responsive to innate stimulation and they had reduced phagocytic activity. In addition, Aoah-/- AMs had metabolic changes characteristic of tolerant macrophages as well as increased cell-surface expression of MHC II and co-stimulatory molecules, findings suggesting that they had been stimulated in situ. Treating Aoah-/- mice with p.o. neomycin normalized AMs’ innate responsiveness while intrarectal LPS administration tolerized AMs. We conclude that AOAH regulates pulmonary mucosal immunity in part by inactivating LPS in the gut. This study sheds light on a previously unappreciated mechanism that regulates pulmonary immune defense via the gut-lung axis.
Introduction
Residing at air-liquid interfaces, alveolar macrophages (AMs) are on the front line of host defense against inhaled microbial pathogens [1–6]. In addition to phagocytosing and killing microbes directly, AMs secrete inflammatory cytokines and chemokines to recruit neutrophils to eliminate pathogens [7–9]. Mice lacking AMs or having hypo-responsive AMs have reduced neutrophil recruitment and are unable to control infections in the lung [7,10].
After macrophages respond to sensing a low dose of a Microbe-Associated Molecular Pattern (MAMP), they usually become hypo-responsive to subsequent MAMP stimulation [11]. This phenomenon, often called “tolerance”, is believed to protect the host from damage caused by excessive or prolonged inflammation, yet the reduction in inflammatory responsiveness may increase susceptibility to secondary infections [12]. AMs isolated from the lungs of experimental septic animals had reduced responses to ex vivo LPS stimulation [13–16] as well as decreased phagocytic and bactericidal activity [17,18], and septic animals were more susceptible to pulmonary infections [15]. Notably, after the resolution of respiratory influenza virus infection, AMs remained tolerant for several months, with reduced NF-κB activation and chemokine production upon MAMP re-stimulation [7]. After secondary bacterial challenge, post-infection mice had reduced neutrophil recruitment and significantly increased bacterial burden in the lungs suggesting that AM-derived chemokines and neutrophil recruitment are indispensable for pulmonary defense [7].
Acyloxyacyl Hydrolase (AOAH) is a host lipase that inactivates LPS by removing the secondary fatty acyl chains from the lipid A moiety [19]. Although there are many mechanisms that can dampen LPS stimulation in vivo, AOAH is required to detoxify LPS in tissues [20–25]. Importantly, AOAH shortens the duration of endotoxin tolerance. After exposure to a small intraperitoneal dose of LPS, Aoah-/- peritoneal macrophages remained tolerized for months and Aoah-/- mice were more susceptible to E. coli challenge than were wildtype mice [12]. The persistence of fully acylated, bioactive LPS prevented macrophages from regaining innate responsiveness [26]. Thus, continuous LPS stimulation keeps macrophages in a tolerant state, and LPS deacylation by AOAH is required to restore macrophage homeostasis.
Much evidence has supported the hypothesis that the intestinal microbiota can regulate pulmonary mucosal immunity [27–30]. We previously found that excessive bioactive LPS translocated from the gut into the circulation and reached the lungs in Aoah-/- mice. Persistent stimulation of alveolar epithelial cells induced tolerance, leading to reduced responses to inhaled allergens and less robust allergic reactions [31]. As both AMs and alveolar epithelial cells are sentinels that contribute to pulmonary defenses, we have now tested whether Aoah-/- AMs are also tolerant and whether Aoah-/- mice are more susceptible to infection. We found that AOAH prevents/reduces AM tolerance and increases resistance to subsequent pulmonary infection.
Results
Aoah-/- mice are more susceptible to pulmonary infection induced by Pseudomonas Aeruginosa
To find out if Aoah-/- mice are hypo-responsive to inhaled microbes and more susceptible to pulmonary infections, we infected mice with intranasal (i.n.) Pseudomonas aeruginosa (PA) [32]. Aoah-/- mice had greater and more prolonged body weight loss and higher bacterial burden in their lungs than did Aoah+/+ mice (Fig 1A). To test whether the increased susceptibility to PA infection is due to reduced pulmonary innate responses, we instilled heat-inactivated (HIA) PA i.n. and found that PA induced less keratinocyte-derived chemokine (KC or CXCL1, a neutrophil chemokine) production and neutrophil recruitment in Aoah-/- mouse lungs (Fig 1B–1D). We also instilled live PA and found reduced airway KC abundance and neutrophil recruitment in Aoah-/- mice (S1 Fig). These data suggested that defective neutrophil recruitment may increase susceptibility to pulmonary infections in Aoah-/- mice [7].
In Aoah-/- mice, both alveolar macrophages and epithelial cells have reduced innate responses to LPS in vivo
We next tested whether Aoah-/- mice had reduced innate responses to inhaled LPS. Five hours after LPS was instilled i.n., the bronchoalveolar lavage fluid (BALF) from Aoah-/- mice contained less TNF-α, IL-6, KC, CCL20 and MCP-1 (CCL-2) than did BALF from Aoah+/+ mice (Fig 2A). In line with previous results [24,33–36], we found that TNF-α is mainly produced by AMs; IL-6 and KC by both AMs and alveolar epithelial cells (AECs); and MCP-1, MIP-2, GM-CSF and CCL20 mainly by AECs (S2 Fig). Thus, both AMs and AECs are hypo-responsive to LPS stimulation in Aoah-/- mice. LPS instillation also recruited fewer neutrophils to the airways and lungs of Aoah-/- mice (Figs 2B and S3).
Aoah-/- alveolar macrophages have reduced innate responses to LPS in vitro
AMs are known to play a critical role in pulmonary host defense [37–39]. To confirm that Aoah-/- AMs had reduced responsiveness, we isolated Aoah+/+ and Aoah-/- AMs and stimulated them with LPS in vitro. LPS induced less TNF-α, KC, and MIP-2 mRNA production (Fig 3A) and protein secretion (Fig 3B) in Aoah-/- AMs than in Aoah+/+ AMs. We also measured the mRNA levels of 4 negative regulators of the TLR signaling pathway. The expression of suppressor of cytokine signalling-1 (SOCS-1) was elevated in Aoah-/- AMs and robustly induced by LPS stimulation in vitro, which may contribute to reduced TNF-α, KC and MIP-2 expression [40,41] (Fig 3C). The expression of other negative regulators, including A20, IRAK-M or SHIP, was similar in Aoah+/+ and Aoah-/- AMs both before and after LPS stimulation (Fig 3C). As AMs are slowly replaced by recruited monocytes [42,43], we tested whether monocyte progenitors in bone marrow and blood monocytes in Aoah-/-mice were already tolerant. We found that upon LPS treatment, similar proportions of Aoah-/- and Aoah+/+ monocytes were stimulated to produce TNF-α and IL-6, suggesting that Aoah-/- monocytes were not tolerant and thus that the lung microenvironment may account for AM tolerance (S4 Fig). The ability of Aoah-/- AMs to phagocytose E. coli was reduced compared with that of Aoah+/+ AMs in vitro and in vivo (Fig 3D and 3E). Thus, Aoah-/- AMs are tolerant: they are hypo-responsive to LPS stimulation and less phagocytic, properties that may contribute to increased susceptibility to pulmonary infections.
Aoah-/- alveolar macrophages have metabolic changes characteristic of tolerant monocytes
Cheng et al. studied monocytes from septic patients and found that the immunotolerant monocytes had reduced OXPHOS activity and produced less lactate upon in vitro LPS stimulation [44]. Similarly, we found that Aoah-/- AMs had slightly reduced mitochondrial mass (Fig 4A). Unlike peritoneal macrophages or bone marrow derived macrophages, AMs only slightly increase glycolysis upon LPS stimulation, yet when AMs were explanted and cultured in vitro, they increased the expression of some glycolytic pathway genes [45–47]. When AMs were explanted and stimulated with LPS, the expression of HIF-1α and its target glycolytic genes Glut-1 and LDHa was not induced in Aoah-/- AMs (Fig 4B). Accordingly, Aoah-/- AMs produced less lactate than did Aoah+/+ AMs, while Aoah-/- and Aoah+/+peritoneal macrophages produced similar amounts of lactate (Fig 4C). When we measured extracellular acidification rate (ECAR) of AMs, we found that after glucose was added, Aoah-/- AMs had reduced ECAR compared with Aoah+/+ AMs, with or without LPS stimulation (Fig 4D). These data suggest that, like tolerant monocytes in septic patients [44], Aoah-/- AMs have reduced mitochondrial function; they do not increase glycolysis upon LPS stimulation in vitro, in keeping with their reduced cytokine or chemokine secretion (Fig 3).
Aoah-/- AMs have increased MHC II and costimulatory molecule expression
As explanted Aoah-/- AMs showed characteristics of endotoxin tolerance, we asked whether they had been activated in vivo. Upon MAMP stimulation, macrophages increase MHC II and co-stimulatory molecule expression [48]. We found that Aoah-/- AMs had increased cell surface expression of MHC II molecule Ia (H2-A) and costimulatory molecule CD86 (Fig 5A and 5B). Aoah-/- AMs also had increased expression of SIRP-α (Fig 5A and5B), a negative regulator of tyrosine kinase-coupled signaling as well as phagocytosis [49,50], in keeping with their decreased phagocytic activity (Fig 3E and 3F). In addition, we found that Aoah-/- AMs had increased MHC II (H2-Aa, H2-Ab1, H2-Eb1), CIITA (Class II Major Histocompatibility Complex Transactivator) and DM (H2-DMa, H2-DMb1, which assists MHC II peptide loading) mRNA; LPS stimulation increased MHC II and DM mRNA in Aoah+/+ AMs (Fig 5C). Increased Ia and CD86 expression provides additional evidence that Aoah-/- AMs may be exposed to endogenous MAMPs that induce innate tolerance and reduce pulmonary defenses.
Circulating or gut-derived LPS inhibits pulmonary innate responses
As we have found that LPS derived from gut commensal Gram-negative bacteria may desensitize lung epithelial cells and reduce their responses to house dust mite allergen [31], we asked whether the reduced AM response to LPS or Pseudomonas aeruginosa was also induced by gut-derived LPS. First, we tested whether or not circulating LPS can tolerize AMs. After s.c. injection, LPS drains slowly via lymphatics to reach the bloodstream [22]. We injected LPS into a mouse footpad and 4 days later we instilled LPS i.n., waited 5 h, and measured inflammatory cytokines and chemokines in the BALF (Fig 6A). Subcutaneous LPS injection increased lung LPS levels (Fig 6A). Mice pretreated with LPS had reduced innate responses to inhaled LPS (Fig 6B). In addition, after we explanted AMs and stimulated them with LPS, we found that TNF-α, KC and MIP-2 secretion was significantly reduced in mice that had received LPS s.c., providing evidence that circulating LPS is able to tolerize AMs (Fig 6C). To study whether gut-derived LPS can tolerize AMs, we gave 50 μg LPS intrarectally to Aoah+/+ mice on days 0, 2, 4, and on day 8, we explanted AMs, and stimulated them with LPS in vitro (Fig 6D). Intrarectally administered LPS increased lung LPS levels (Fig 6D). AMs from LPS-treated mice had significantly lower TNF-α, IL-6, KC and MIP-2 secretion (Fig 6E). These results suggest that gut-derived LPS can get to the lung via circulation and tolerizes AMs.
Intestinal LPS regulates pulmonary innate responses in a TLR4-dependent manner
We found previously that Aoah-/- mouse feces had more bioactive LPS than did that of Aoah+/+ mice and that antibiotic treatment reduced the levels of bioactive LPS in Aoah-/- mouse feces and blood [31]. To find out whether intestinal commensal LPS also modulates AM responsiveness, we added neomycin to drinking water to deplete commensal aerobic Gram-negative bacteria (Fig 7A). Neomycin is poorly absorbed from the gastrointestinal tract. Neomycin treatment reduced lung LPS levels (Fig 7A), significantly increased in vivo innate responses to LPS in the lungs, and diminished the difference between Aoah+/+ and Aoah-/- mouse lung responses (Fig 7B), suggesting that exposure to gut commensal LPS desensitizes AM responses. These data provide further evidence that LPS derived from gut commensals may translocate into the bloodstream, travel to the lung, and decrease innate responses to LPS in AMs.
As we had evidence that gut-derived LPS tolerizes AMs, we hypothesized that the hypo-responsiveness of Aoah-/- AMs relies upon TLR4 sensing of LPS and that when the LPS sensor TLR4 is missing, Aoah-/- and Aoah+/+ AMs have similar responsiveness. We treated AMs from naïve Aoah+/+, Aoah-/-, Tlr4-/- and Aoah-/-Tlr4-/- mice with a TLR2 ligand (Pam3CSK4) in vitro. When TLR4 was present, Aoah-/- AMs produced less KC and MIP-2 than did Aoah +/+ AMs, providing evidence that Aoah-/- AMs were also hypo-responsive to other TLR agonists in addition to LPS (cross-tolerance or hetero-tolerance [51]) (Fig 7C). When TLR4 was lacking, the difference between innate responses in Aoah+/+ and Aoah-/- AMs diminished, suggesting that TLR4 sensing is required to produce Aoah-/- AM tolerance (Fig 7C).
Discussion
Discovered in the 1980s, AOAH is a highly conserved and unique host lipase that deacylates LPS [19]. By removing the secondary fatty acyl chains from lipid A, AOAH converts stimulatory hexaacyl LPS to antagonistic tetraacyl LPS. We found previously that AOAH is required to prevent prolonged endotoxin tolerance in the peritoneal macrophages of LPS-exposed mice [12,26]. In this study, we found that AOAH also may sensitize alveolar macrophages (AMs) by decreasing the abundance of bioactive LPS in the gut.
Aoah-/- mice were more susceptible to Pseudomonas aeruginosa (PA)-induced pulmonary infection. Upon inhaling P. aeruginosa, Aoah-/- mice secreted less KC and recruited fewer neutrophils to their lungs than did Aoah+/+ mice. Cytokines produced by both alveolar macrophages and epithelial cells were reduced in responses to intranasally instilled LPS Aoah-/- mice. When we stimulated AMs in vitro, Aoah-/- AMs were hypo-responsive and less phagocytic than were Aoah+/+ AMs, confirming that the Aoah-/- AMs were tolerant. Interestingly, Aoah-/- AMs had reduced mitochondrial mass and could not increase glycolysis upon LPS re-stimulation, properties that resemble those reported for tolerant monocytes from septic patients [44]. Aoah-/- AMs also expressed high levels of MHC II and co-stimulatory molecules, suggesting that they were stimulated in situ. We further showed that circulating LPS coming from a distal subcutaneous injection site or intrarectally administered LPS could tolerize AMs, while antibiotic treatment that reduced colonic commensal Gram-negative bacteria prevented AM tolerance in Aoah-/- mice. Importantly, TLR4 sensing was required for tolerance to be maintained in Aoah-/- AMs. We conclude that by deacylating commensal LPS in the gut, AOAH prevents AM tolerance and therefore increases resistance to pulmonary infections.
Many previous studies have found that the intestinal microbiota shapes lung immunity [28–30]. Gut microbiota are required for pulmonary defense against bacterial or viral infections [52–55]. On the other hand, dysbiosis or excessive translocation of gut commensal bacteria or their components into the circulation may reduce host defense in the lungs [29,56]. Mason et al. found that injection of LPS into the portal vein led to reduction in P. aeruginosa clearance after aerosol challenge, with reduced neutrophil recruitment, decreased AM phagocytic activity and diminished TNF-α production in the lung, findings suggesting that excessive gut-derived LPS can compromise lung defense [57]. In this study, we found that when an elevated amount of bioactive LPS was present in the intestine of Aoah-/- mice, AMs become tolerized. Previously, we found that Aoah-/- mouse lung epithelial cells were also desensitized by gut-derived LPS [31]. As pulmonary epithelial cells are essential for shaping innate immunity in the lung [38,58–60], desensitization of both epithelial cells and AMs may increase susceptibility to pulmonary infections additively or synergistically. Our data suggest that stimulation of TLR4 by gut-derived LPS is required for Aoah-/- AM tolerance. As both AMs and AECs express TLR4, it is not clear whether direct stimulation of TLR4 on AMs induces tolerance or epithelial desensitization leads to AM tolerance. How AECs shape the innate responsiveness of AMs in Aoah-/- mice will be studied in the future.
We found that feces from Aoah-/- mice contained more bioactive LPS than did those from co-housed wildtype mice [31]. AOAH mRNA is expressed in the small and large intestines, mainly in macrophages and dendritic cells, both of which can take up Gram-negative bacteria or LPS and deacylate LPS [31,61–63]. AOAH may also be secreted and taken up by non-AOAH producing cells and deacylate LPS [64,65]. In addition, extracellular AOAH may act on LPS in the gut lumen [66]. Intestinal LPS that reaches the liver via portal vein may be further deacylated by AOAH produced by Kupffer cells, NK cells and dendritic cells [23,25,67]. How and where intestinal LPS is deacylated by AOAH awaits further investigation.
The tolerant Aoah-/- AMs had distinctive features. First, unlike macrophages in other organs, AMs were not tolerized after intravenous LPS injection [68–71], and in unpublished studies we found that intranasal instillation of LPS partially primed AMs. Acute exposure to intravenous or inhaled LPS may reprogram AMs differently from chronic low-level LPS exposure in Aoah-/- mice. Indeed, we found that subcutaneously-injected LPS also induced AM tolerance instead of priming the cells. Second, tolerant Aoah-/- AMs had reduced phagocytic activity; other studies have found that tolerant macrophages are more phagocytic [72,73]. Third, upon PAMP stimulation, tolerant Aoah-/- AMs secreted less KC, which leads to reduced neutrophil recruitment, while Ariga et al., found that endotoxin tolerance promotes neutrophil recruitment to infected sites [74]. The discrepancy may be due to LPS exposure dose and time, the tissue microenvironment, and macrophage origins (tissue resident or monocyte-derived).
Previously, we found that after LPS i.p. injection, tolerant Aoah-/- peritoneal macrophages had increased expression of a TLR signaling negative regulator, IRAK-M [12,26], while A20, another negative regulator, was induced in Aoah-/- mouse lung epithelial cells [31]. In this study we found that SOCS-1 was upregulated in Aoah-/- AMs before and after LPS stimulation, while IRAK-M, A20 and SHIP expression was unchanged. SOCS-1 negatively regulates TLR signaling and is responsible for endotoxin tolerance [40,41,75]. Notably, SOCS-1 can be secreted by AMs in exosomes and inhibits STAT1 activation in lung epithelial cells [76]. SOCS-1 also limits STAT3/HIF-1α axis activation and reduces glycolysis in peritoneal cells [77], in line with our findings that Aoah-/- AMs have increased SOCS-1 expression and reduced glycolysis upon LPS re-stimulation.
Tolerant Aoah-/- AMs had higher surface expression of MHC II and CD86 molecules. Long-lived AMs reside in alveoli and maintain their abundance by self-renewal [38]. In naïve mice, a small number of monocytes contribute to the AM pool, while during lung inflammation and injury, monocytes are recruited to the alveoli [38,43]. When Aoah-/- lungs are constantly exposed to low levels of gut-derived LPS, resident AMs may increase their MHC II molecule and co-stimulatory molecule expression. In contrast, 14 days after LPS i.p. injection, tolerant Aoah-/- peritoneal macrophages expressed low levels of CD86 [26]. The discrepancy may be that 14 days after LPS i.p. injection, approximately 75% of peritoneal macrophages are derived from recruited monocytes [78] and monocyte-derived macrophages may maintain low levels of CD86 expression when bioactive LPS persists in Aoah-/- mouse peritoneum.
As AMs are at the first line of defense against airborne pathogens and can be obtained for study with minimal disturbance, we focused on these cells and did not study other cells that may participate in pulmonary host defense. It should be of interest to find out if lung interstitial macrophages, such as recently-discovered immunoregulatory CD169+ nerve- and airway-associated macrophages [79] or Lyve1loMHCIIhiCX3CR1hi and Lyve1hiMHCIIloCX3CR1lo macrophages [80] also develop persistent tolerance in Aoah-/- mouse lungs. In addition, how altered AM metabolism contributes to immune responsiveness is also fertile ground for more detailed investigation.
In a previous study we found that AOAH promotes recovery from acute lung injury by inactivating inhaled LPS or the LPS produced by Gram-negative bacteria that enter the lung [24]. We also found that by deacylating gut commensal LPS, AOAH sensitizes pulmonary epithelial cells for allergen stimulation [31]. Here we provide evidence that the enzyme, by deacylating LPS in the intestine, also prepares alveolar macrophages to carry out pulmonary antibacterial defense. This highly conserved enzyme thus modulates pulmonary mucosal immunity by degrading LPS that reaches the lungs from both endogenous and exogenous sources.
Materials and methods
Ethics statement
All mice were housed under specific pathogen-free conditions in Fudan University, the Department of Laboratory Animal Science, and studied using protocols approved by the Institutional Animal Care and Use Committee (IACUC) of Fudan University (approved animal protocol number 20170816–002). All protocols adhered to the guide for the Care and Use of Laboratory Animals.
Mice
C57BL/6J Aoah+/+, Aoah−/− and Tlr4−/−Aoah−/− mice were obtained from the laboratory of Dr. Robert Munford at the National Institutes of Health, Bethesda, MD, USA. The generation of Aoah−/− mice has been described previously (Lu et al., 2003). The mutated Aoah gene had been backcrossed to C57BL/6J mice for at least 10 generations. Tlr4−/−Aoah−/− mice were produced by crossing Aoah−/− and Tlr4−/− mice. Aoah+/+ and Aoah-/- mice were cohoused for at least 3 weeks before the start and throughout the experiments. We found previously that co-housed Aoah+/+ and Aoah-/- mice had similar microbiota and that Aoah-/- mouse feces had more bioactive LPS than did Aoah+/+ mouse feces [31].
Reagents
Anti-mouse antibodies used for flow cytometry were anti-CD45-BV785 (Clone 30-F11, BioLegend), anti-CD11b-FITC (Clone M1/70, BD), anti-CD11c-V450 (Clone N418, eBioscience), anti-Ly6G-FITC (Clone 1A8, BD), anti-SiglecF-PE (Clone E50-2440, BioLegend), anti-MHC II-PE-Cy7 (Clone M5/114.15.2, BD bioscience), anti-Ly6C-APC-Cy7 (Clone HK1.4, BD bioscience), anti-CD64-AF647 (Clone X54-5/7.1, eBioscience), anti-IL-6-PE (Clone MP5-20F3, BD bioscience) and anti-TNF-α-APC (Clone MP6-XT22, BD bioscience). Mouse IL-6, TNF-α, and MCP-1 ELISA kits were from BD; KC, CCL20 and MIP-2 kits were from R&D system. Lactic Acid LD test kit was obtained from Nanjing Jiancheng Bioengineering Institute.
P. aeruginosa culture and infection
The prototypic strain of Pseudomonas aeruginosa PAO1 was inoculated and cultured for 18 h in LB Broth (Difco, BD Diagnostics) at 37°C with constant shaking. The bacteria were then centrifuged and the pellet was re-suspended in PBS. The bacterial suspension was adjusted to OD650 = 0.5, which contained about 8 × 108 colony forming units (CFU)/ml. The bacterial suspension was diluted and spread on LB plates to confirm the bacterial concentration. After Aoah+/+ and Aoah-/- mice were anesthetized with 0.5% pentobarbital sodium (50 μg/g body weight) i.p., about 3 × 106 CFU live PAO1 or 1 × 107 heat-killed (boiled for 15 minutes) PAO1 in 40 μl PBS were instilled intranasally. Before and after infection, mouse body weight was measured daily for 7 days. In some experiments, 2 days after infection, mice were euthanized and their blood and lungs were collected. The lungs were aseptically dissected and homogenized in 1 ml sterile PBS. The blood and tissue homogenates were diluted and spread on LB plates. The plates were incubated at 37°C for 18 h, and CFUs were counted to determine lung bacterial load. In other experiments, bronchoalveolar lavage (BALF) was collected for immune cell analysis and cytokine concentration measurement 5 h after bacterial instillation.
Bronchoalveolar lavage (BALF) analysis
BALF was obtained as described in a previous study [24]. Briefly, mice were anesthetized and exsanguinated by cutting the inferior vena cava. Bronchoalveolar lavage was performed using 1 ml of EDTA-containing PBS for 5 times. The BALF collected from one mouse was combined and centrifuged at 1500 rpm for 5 min at 4°C. The supernatant was used for cytokine or chemokine ELISA and the cell pellet was re-suspended in PBS. The cells were counted using Cellometer (Nexcelom) and the cells were stained and analyzed using FACS.
Isolation and culture of AMs
After BALF was collected and centrifuged, the cell pellet was resuspended in complete RPMI medium, which contained 10% fetal bovine serum (Hyclone), 2 mM glutamine, 100 U/ml penicillin, and 0.1 mg/ml streptomycin (Life Technologies). BALF cells were incubated at 37°C for 4 h and AMs were allowed to adhere to plastic plates. The floating cells were then washed away and AMs were treated with PBS, 10 ng/ml LPS O111 (Sigma) or 10 ng/ml Pam3CSK4 (Invivogen, TLR1/2 agonist) for 6 h. The culture media were collected for cytokine or chemokine ELISA and the cells were lysed for protein measurement. To measure cytokine or chemokine mRNA, AMs were stimulated for 2 h and the cells were lysed for qPCR. In some experiments, Aoah+/+ mice were injected with 50 μg LPS in the left footpad. After 4 days, the mice were instilled with 10 μg LPS i.n. and their BALF was collected 5 h later for ELISA; or their BALF was harvested and AMs were explanted for in vitro LPS stimulation.
Lung digestion and single cell preparation
To measure immune cells in the lung, the lungs were perfused, excised, then cut into 1 mm3 pieces and incubated at 37°C for 1 h while shaking in digestion buffer, which contained RPMI 1640 (Gibco), 1 mg/ml collagenase IV (Sigma) and 10 U/ml DNase I (Sigma). The digested lung tissues were filtered through a 70 mm cell strainer. Red blood cells were then lysed using ACK lysis buffer (eBioscience). Cells were stained with antibodies and subjected to flow cytometric analysis or magnetic activated cell sorting.
Flow cytometry
BALF or lung single cell suspension was obtained after PBS, LPS or heated-P. aeruginosa i.n. instillation. Lung cells were collected by centrifugation and then incubated with Fc blocking antibody (purified anti-mouse CD16/32, BioLegend) on ice for 15 min. After the cells were stained with fluorescence-conjugated antibodies for 30 min on ice, the cells were washed and subjected to FACS (BD, FACSCelesta). The FACS data were analyzed using Flow Jo software (TreeStar,Inc). All antibodies used for flow cytometry were anti-mouse antigens.
Quantitative real-time PCR (qPCR)
RNA from AMs was isolated using TRNzol Universal Reagent (Tiangen) and reversely transcribed (Tiangen). The primers used for qPCR were listed in S1 Table. Actin was used as an internal control and the relative gene expression was calculated using the ΔΔCt quantification method.
Phagocytosis analysis
Alveolar macrophages were isolated from BALF and plated at 3 × 105 macrophages/well in a low adherent 96-well tissue culture plate. FITC-labeled E. coli bioparticles (Vybrant Phagocytosis Assay; Invitrogen) were added to each well at a ratio of 50 bacteria/cell in RPMI medium with 10% fresh mouse serum, and the plates were incubated for 2 h at 37°C with 80 rpm shaking. AMs were then harvested, trypan blue was added to each well to quench the fluorescence of extracellular bacteria, and intracellular bacteria fluorescence was measured using FACS. Geometric mean florescence intensity (Geo MFI) of FITC was calculated. To measure phagocytic activity of AMs in vivo, mice were instilled i.n. with 2 × 107 FITC E. coli K12. Two h later, BALF cells were collected, stained with anti-CD11c-APC Ab and subjected to FACS analysis. AMs were gated as CD11chi cells and the Geo MFI of FITC was measured.
Blood and bone marrow monocyte innate response
Blood and bone marrow were taken from naïve Aoah+/+ or Aoah-/- mice. After red blood cells were lysed using ACK lysis buffer, the single cells of blood or bone marrow were cultured in RPMI 1640 containing 5% FBS in low-adherent plates, and then treated with 10 ng/ml LPS. Brefeldin A (5 μg/ml, BioLegend) was added simultaneously to block cytokine secretion. Six h later, blood and bone marrow cells were washed, intracellular TNF-α, IL-6 and cell surface CD11b and Ly6C were stained before FACS analysis.
Magnetic activated cell sorting (MACS)
To identify the source of cytokines or chemokines, AMs and Alveolar epithelial cells (AECs) were obtained from BALF or lungs respectively. AECs (CD45- CD326+) were sorted using anti-CD45 and anti-CD326 antibody-conjugated magnetic beads (Miltenyi Biotec) according to the manufacturer’s instructions. The purity of CD45- CD326+ cells was above 90% by flow cytometric analysis.
ECAR analysis
AMs were plated at 3 × 104 macrophages/well in a XF-96 plate and cultured in RPMI medium containing 5% FBS for 24 h at 37°C. The extracellular acidification rate (ECAR) was measured in a Seahorse XF extracellular flux analyzer (Agilent Technologies) according to the manufacturer’s instructions. Glucose (10 mM, Sigma), oligomycin (1 μM, Sigma) and 2-deoxyglucose (2-DG, 50 μM, Sigma) were used. Data were analyzed using Wave Desktop software version 2.6 (Agilent Technologies).
Lactic acid measurement
Lactic acid produced by AMs was measured using Lactic Acid LD test kit (Nanjing Jiancheng Bioengineering Institute). After AMs were treated with PBS or LPS in RPMI medium containing 0.5% FBS for 24 h, culture media were collected, added to LDH (lactate dehydrogenase) working reagent with substrate and mixed well. The reaction was performed at 37°C for 10 min and the plates were read at 530 nm (Tecan). Lactic acid standards were used to generate standard curve for quantitation.
Antibiotic treatment
To deplete intestinal commensal Gram-negative bacteria, mice were fed 1 g/L neomycin sulfate (Sigma) in their drinking water for at least 3 weeks before the mice were instilled 10 μg LPS intranasally.
LPS quantification in lungs
Mouse lungs were dissected and homogenized in endotoxin-free PBS. After centrifugation, the supernatants were collected for TLR4-stimulating activity using a cell-based colorimetric endotoxin detection kit (HEK-Blue LPS Detection Kit2, Invivogen). In brief, diluted samples were added to human embryonic kidney (HEK-293) cells that express hTLR4 and an NF-κB–inducible secreted embryonic alkaline phosphatase reporter gene. After 18 h incubation, cell culture media were applied to QUANTI-Blue medium to measure alkaline phosphatase activity. Plates were read at a wavelength of 620 nm (Tecan).
Statistical analysis
Data were presented as mean ± SEM. Difference between groups were analyzed using Mann-Whitney test. To compare kinetic difference, two-way ANOVA test was used. The statistical significance was set at P < 0.05. *, P < 0.05; **, P < 0.01; ***, P < 0.001.
Supporting information
Acknowledgments
We thank Dr. Robert Munford for very helpful discussion and manuscript editing and Dr. Yuping Lai for kindly providing Pseudomonas aeruginosa.
Data Availability
All relevant data are within the manuscript and its Supporting Information files.
Funding Statement
This study was supported by grants HS2021SHZX001 (Major Project, W.Z.), 20ZR1443800 (J.T.), 22ZR1448800 (J.T.), and 21ZR1405400 (M.L.) from Science and Technology Commission of Shanghai Municipality https://stcsm.sh.gov.cn/, grants 32170929, 91742104, 31770993 and 31570910 (M.L.) from National Natural Science Foundation of China http://www.nsfc.gov.cn/. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
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