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. 2023 Sep 1;18(9):e0286479. doi: 10.1371/journal.pone.0286479

Low seroprevalence of Ebola virus in health care providers in an endemic region (Tshuapa province) of the Democratic Republic of the Congo

Trésor Zola Matuvanga 1,2,3,*, Joachim Mariën 4, Ynke Larivière 2,3, Bernard Isekah Osang’ir 2,3, Solange Milolo 1, Rachel Meta 1, Emmanuel Esanga 5, Vivi Maketa 1, Junior Matangila 1, Patrick Mitashi 1, Steve Ahuka Mundeke 6, Hypolite Muhindo-Mavoko 1, Jean-Jacques Muyembe Tamfum 6, Pierre Van Damme 2, Jean-Pierre Van Geertruyden 3
Editor: Jean-François Carod7
PMCID: PMC10473486  PMID: 37656725

Abstract

Introduction

A serosurvey among health care providers (HCPs) and frontliners of an area previously affected by Ebola virus disease (EVD) in the Democratic Republic of the Congo (DRC) was conducted to assess the seroreactivity to Ebola virus antigens.

Methods

Serum samples were collected in a cohort of HCPs and frontliners (n = 698) participants in the EBL2007 vaccine trial (December 2019 to October 2022). Specimens seroreactive for EBOV were confirmed using either the Filovirus Animal Nonclinical Group (FANG) ELISA or a Luminex multiplex assay.

Results

The seroreactivity to at least two EBOV-Mayinga (m) antigens was found in 10 (1.4%: 95% CI, 0.7–2.6) samples for GP-EBOV-m + VP40-EBOV-m, and 2 (0.3%: 95% CI, 0.0–1.0) samples for VP40-EBOV-m + NP-EBOV-m using the Luminex assay. Seroreactivity to GP-EBOV-Kikwit (k) was observed in 59 (8.5%: 95%CI, 6.5–10.9) samples using FANG ELISA.

Conclusion

In contrast to previous serosurveys, a low seroprevalence was found in the HCP and frontline population participating in the EBL2007 Ebola vaccine trial in Boende, DRC. This underscores the high need for standardized antibody assays and cutoffs in EBOV serosurveys to avoid the broad range of reported EBOV seroprevalence rates in EBOV endemic areas.

Introduction

Ebola virus disease (EVD) was first observed during two simultaneous epidemics in 1976 in South Sudan and the Democratic Republic of the Congo (DRC) [1,2]. Since then, there were fifteen epidemics throughout the DRC, including one in the Boende area, province of Tshuapa in 2014 [3,4]. The frequency of EVD epidemics in the DRC increased tremendously over the past five years with seven epidemics occurring between 2017 and 2022. Mathematical models predict at least one epidemic each year [5]. An improved surveillance system and better diagnostic tools can partly explain the increasing trend. Further, villagers are more likely to come into contact with the natural reservoir of Ebolavirus Zaire (EBOV), as pristine habitats in the Congo Basin are transformed into farmland and cut at an unprecedented rate to provide wood for industries [6]. Human encroachment into these new habitats results in increased bushmeat hunting and a higher level of exposure to the virus, which is most likely spilled over from bats or monkeys [7]. Furthermore, flare-ups of EVD epidemics might also result from chronically infected patients, which was noted recently in Guinea where a survivor passed the virus on to his partner via semen more than 500 days after contracting EVD [5,8,9].

While spillover from animals to humans is considered to be rare [10], epidemics are primarily the result of direct person-to-person transmission via body fluids or indirect transmission via contaminated materials [11]. Due to occupational exposure, healthcare providers (HCPs) are more at risk during an outbreak than others in the general community and become a potential source of transmission themselves [12]. For example, during the seventh EVD outbreak in the DRC, which occurred in Boende Health District (2014), three HCPs were identified as potential super-spreaders of community-level disease transmission [13]. Similarly, health facilities may facilitate transmission to the community as infected patients, visitors, and the general public come together there [14,15]. For example, the EBOV epidemic in 1995 was mainly driven by nosocomial transmission at Kikwit General Hospital of DRC [16].

While epidemics are typically monitored through PCR-confirmed active cases, serosurveillance data represents the accumulative number of infections and may detect several undiagnosed cases. Indeed, EBOV infections may remain asymptomatic or paucisymptomatic after exposure to the pathogen [17]. This has been observed in recent studies where EBOV antigen seroreactivity is increasingly reported [8,18,19]. In unaffected areas, seroreactivity to GP-EBOV was reported in urban areas of Cameroon (1.3%), and DRC in Kinshasa (2%) and Kasaï Oriental (3.5%) [8,18,20,21]. In a resident pygmy population including traditional hunters in Watsa locality (Haut-Uele province, DRC) a seroprevalence of 18.7% was reported [8]. A study including HCP and frontliners, regardless of their self-reported history of EVD, found 3.4% of EBOV antigens seroreactivity in Kabondo—Dianda (southeastern DRC and forest-savannah area) [22]. A serosurvey conducted at the end of the 2014–2016 epidemic in Sierra Leone showed a seroreactivity of 8% among apparently healthy participants volunteering for an Ebola vaccine trial, with no self-reported history of EVD [23]. Serosurveys in the DRC obtained highly variable seroprevalence estimates depending on the region and the target group. While the EBOV seroprevalence in Boende after the previous epidemic of 2014 was high (28.1%) among healthy HCP never reporting an infection [24], the seroprevalence estimate was much lower in another study conducted in the same area (7%) [22]. A serosurvey conducted on blood samples collected from clinically suspected EVD cases that were sent home after testing negative in two consecutive EBOV RT-PCR during the tenth EBOV outbreak in DRC Ituri, Nord Kivu and Sud Kivu provinces, 2018–2020), reported an EBOV antigen seroreactivity of 2.3% [25] (Table 1).

Table 1. EBOV seroprevalence estimates using different assays in DRC.

Area of DRC Year *EBOV Seroprevalence (%) Assay CI Population Sample size (N) Studies
Kikwit 1995 2.2 ELISA 0.3–4.0 Forest and City Workers 414 Busico et al. Journal of Infectious Diseases 1999, 79: S102-S107.
Watsa 2002 18.7 ELISA 14.4–23.5 General popualtion (pygmy) 300 Mulangu et al. BMC infectious diseases 2016, 16.1: 1–6
Sankuru 2007 11.0 ELISA 9.9–12.7 General population 3415 Mulangu et al. The Journal of Infectious Diseases 2018, 217.4: 529–537
Kinshasa 2011–2012 2.0 Luciferase immunoprecipitation system + neutralization 0.7–5.1 Blood donors 752 Imke et al., Emerging Infectious Diseases. 25 (5) 2019
Boende 2015 22.5 ELISA 19.2–25.9 Healthcare workers 611 Doshi et al. The Journal of Infectious Diseases (2020).
Boende 2015 28.1 ELISA, Luciferase immunoprecipitation system + neutralization 24.4–31.4 Healthcare workers 565 Hoff et al. The Journal of infectious diseases, 2019, 219.4: 517–525
Boende 2015–2017 7.0 ELISA 5.0–8.8 General population 687 Bratcher et al. PLoS Neglected Tropical Diseases, 2021, 15.8: e0009566.
Beni, Butembo, Katwa, and Mabalako 2018–2020 2.3 Luminex assay 1.1–4.0 Suspected cases of the tenth DRC epidemic of Ebola 600 Nkuba-Ndaye et al. J Infect Dis. 2022;226(2):352–356

*Seroprevalence based on the GP-EBOV antigen seroreactivity.

However, despite many studies assessing the GP-EBOV antigen seroreactivity in different populations and different locations/countries, the interpretation of this seroprevalence data is challenging given the variation of the assays employed and diversity of cutoff algorithms used [8,12,18,2628]. Seroreactivity to a single EBOV antigen may not be sufficient to demonstrate prior exposure to EBOV, especially in asymptomatically infected persons [29,30]. Despite the broad range of EBOV seroprevalence rates in the EBOV endemic areas, previous serological surveys may have overestimated seroprevalence rates due to cross-reactivity against other infectious diseases (i.e. low specificity) [10,28]. The use of more specific assays to determine the seroreactivity based on at least two antigens may therefore provide a better understanding of the baseline seroprevalence before a vaccine immunogenicity assessment [31,32].

The study presented here, combines (1) the seroresults of baseline blood samples collected among HCP and frontliners participating in the EBL2007 vaccine trial which evaluates the safety and immunogenicity of the two-dose Ad26.ZEBOV, MVA-BN-Filo Ebola virus vaccine regimen (ClinicalTrials.gov identifier: NCT04186000) with (2) the results from an ecological survey to determine information related to the current and past residence and work locations of a cohort of HCP included in the EBL2007 vaccine trial [33]. On the baseline blood samples collected, pre-existing antibodies against EBOV among the participants were assessed using both FANG ELISA and Luminex assay. While the first assay only targets IgG antibodies against the glycoprotein (GP) of EBOV, the second assay also targets the nucleocapsid (NP) and the viral matrix protein 40 (VP40) which increases its specificity to 99% [34]. This manuscript reports the baseline seroprevalence of Ebolavirus Zaire (EBOV) among HCP and frontliners participants in the EBL2007 trial conducted in the health district of Boende in DRC.

Materials and methods

Origin of samples

Baseline serum samples were collected before vaccination in an open-label, monocentric, phase 2, randomized trial to evaluate the immunogenicity and safety of Ad26.ZEBOV and MVA-BN-Filo in healthy HCP and frontliners in Boende Health District of DRC (EBL2007 trial, ClinicalTrials.Gov: NCT04186000) [33]. The trial site was located in the Boende General Hospital of Tshuapa province at approximately 750 km north-west of the capital city of Kinshasa in DRC. Blood samples were collected from healthy participants with no reported history of EVD or previous EBOV vaccination. During the first visit of the EBL2007 trial serum samples were collected for baseline determination of IgG GP-EBOV by the means of FANG ELISA and Luminex assay. At one year after inclusion of participants in the EBL2007 vaccine trial, a survey nested within the EBL2007 vaccine trial collected information related to where HCPs and frontliners lived and worked in the past, and their previous contacts with EVD cases.

Operational definition

The HCP term in the EBL2007 vaccine trial included medical doctors, nurses, midwives, laboratory staff, pharmacy staff, hygienists, health facility cleaners, and nursing assistants working in a hospital, Health Center, Health Post, or Health District office. Frontliners encompassed community health workers, first aiders, and those working in the Health District office and or the Provincial Division of Health. Direct contact was defined as any HCP and frontliners who may have had direct interaction with patients infected with EVD at a hospital or treatment center during an outbreak. Indirect contact was considered the work of frontliners and other HCPs whose jobs did not bring them into direct interaction with sick patients but could bring them in contact with contaminated material.

Serological testing

The study was performed according to the good clinical laboratory practice guidelines of the Division of Acquired Immunodeficiency Syndrome and WHO [35,36] to ensure high quality, reliable, and reproducible data at Q Squared Solutions (San Juan Capistrano, CA, US) Vaccine Testing Laboratory for FANG ELISA and Institut National de Recherche Biomédicale (INRB) in DRC for the Luminex Assay.

Considering only the seroreactivity to GP EBOV antigen, a higher specificity (95.4%: IC95% 89.6–98.0) and similar sensitivity (96.8%: IC95 91.3–98.9) to that of commercial ELISA assays was reported in a study comparing Luminex to the commercial ELISA kits more commonly used in previous serological surveys [32]. Using the FANG ELISA was shown to be greater accurate and precise than a commercial alternative for assessing immune response after Ebola vaccination [37].

LUMINEX Assay technology

The serology testing was performed with Luminex Magpix® technology (Luminex Corp., Austin, TX) as per the previously published protocol [17,32]. Four recombinant commercially available EBOV antigens were coated onto magnetic beads: two glycoproteins, GP-EBOV-kis (Kissidougou/Makona 2014 strain) and GP-EBOV-m (Mayinga 1976 strain); 1 nucleoprotein, NP-EBOV-m (Mayinga 1976 strain); and 1 40-kDa viral protein (VP40-EBOV-m, Mayinga 1976 strain). The bead-coupled antigens were mixed with the patient sample (1:1000 sample to dilution buffer), and the signal from the response for anti-EBOV immunoglobulin G (anti-IgG) was read and stored on Bio-Plex 200 hardware (Bio-Rad, Marnes-la-Coquette, France). All results were reported as the median fluorescence intensity (MFI). Based on the serological responses, a participant was deemed to bear the pre-existing antibodies against EBOV antigens when the sample was reactive above the cutoff for at least two different EBOV antigens.

FANG ELISA

The methods used to perform the FANG ELISA have been described in previous studies [37]. Before the addition of test samples, 96-well microplates were coated with 100 μL of recombinant GP-EBOV-Kikwit (k) and incubated at 4°C in the absence of light. In addition to this, a standard obtained from one or more serially diluted vaccinated donors had been added. Incubation was performed by adding horseradish peroxidase conjugate from goat anti-human IgG to each well. The substrate 3, 3’, 5, 5’-tetramethylbenzidine was then incorporated into each well. The addition of sulfuric acid solution stopped the enzymatic reaction. The color change was then observed with a plate reader. The plate reader was used to report the quality controls as well as the concentrations of the added samples. The concentrations of these samples were based on the standard curve calculated using a 4-parameter logistic curve (4PL) and are expressed as ELISA units/ml (EU/ml). Final titers were determined based on a cutoff optical density (OD) value and were reported as the reciprocal of the highest dilution with a positive OD value.

Sample size and statistical analysis

The number of participants eligible for the EBL2007 trial with available aliquots (n = 698) at the inclusion visit predetermined the number of enrolled subjects in the serosurvey. Subjects reacting to EBOV antigens (GP, NP, and VP40) were summarized using proportions with 95% confidence interval. Demographic and ecological data were compiled and summarized using descriptive statistics for all participants enrolled in the EBL2007 vaccine trial using SPSS 28.0 IBM SPSS Statistics for Windows, version 28.0 and R 4.2.1 Statistical Software.

Both the FANG ELISA and Luminex assay do not have an established cutoff to distinguish individuals with seroreactivity to an EBOV antigen. In the absence of a represented control panel to estimate a cutoff, we calculated cutoff values by change point analysis [38] using R [39]. In the supporting information, we also provide seroprevalence estimates based on cutoff values obtained from literature (S4 Table).

To further investigate if the signal of the antibody assay represents true past exposure to EBOV, we tested if participants from the EBOV risk groups (based on age, sex, direct or indirect contact with patients in general, working in a hospital or elsewhere, previous contact with Ebola patients or experienced an outbreak at a location where you lived) were significantly more likely to be antibody positive. We used a generalized linear model with binomial link function. For each individual antigen, the participant’s seropositivity status was included as response variable and the participant characteristics as explanatory variables. Only combinations of the Luminex GP-EBOV-m+VP40-EBOV were considered, as the sample size of the positive group was too small for all other combinations. P-values were considered significant below a value of 0.05.

Ethics statements

Ethics Committee of the University Hospital of Antwerp/University of Antwerp (approval reference n°19/14/177) and the National Ethics Committee of the DRC Ministry of Health approved the study protocol of EBL2007 (approval reference n°121/CNES/BN/PMMF/2019). The National Ethics Committee of the DRC Ministry Health under approval reference n ° 212/CNES/BN/PMMF/2020 approved the ecological survey nested in the EBL2007 Vaccine trial. For both the EBL2007 trial and the ecological survey participants provided written informed consent.

Results

Participants characteristics

A total of 720 HCPs and frontliners were screened for inclusion in the EBL2007 trial, of which 699 (96.9%) agreed to participate in the baseline seroprevalence study. However, one participant withdrew consent prior to blood collection. Thus, blood samples were available for 698 (99.9%) participants with a mean age of 45 years (standard deviation = 12.0) and 534 (76.5%) were male (Table 2). The FANG ELISA results for five samples were indeterminate. Nearly two-thirds of the HCPs and frontliners [492 (70.5%)] worked in a health facility in the Boende Health District and 410 (59.0%) were HCPs working in direct contact with patients. Forty-three (6.2%) of them reported a direct contact with patients during a previous Ebola outbreak in Boende or elsewhere. From a minority (3.5%) we are not sure if they ever had contact with infectious patients during an Ebola outbreak.

Table 2. Participants characteristics.

Characteristic N = 698 % Mean (SD) Min Max
Age (year) 45.0 (12.0) 19 75
Sex
Female 164 23.5
Male 534 76.5
Profession
Community Health Worker 236 33.8
Nurse 181 25.9
First Aid Worker 177 25.4
Hygienist 37 5.3
Midwife 30 4.3
Medical Doctor 13 1.9
Health Facility Cleaner 10 1.4
Care Giver 7 1.0
Other 3 0.4
Laboratory Technician 2 0.3
Pharmacist Assistant 2 0.3
Place of work in Boende
Health Facility (Hôpital, Centre de Santé, Poste de Santé) 492 70.5
Health District Office (Bureau central Zone de Santé) 8 1.1
Croix-Rouge Boende 177 25.4
Inspection Provinciale de la Santé 1 0.1
Aire de Santé 10 1.4
Division Provinciale de la Santé Tshuapa 9 1.3
Programme Elargi de Vaccination Boende 1 0.1

Seroreativity to EBOV proteins using FANG ELISA and or Luminex

When considering antibody responses against EBOV antigens individually, we found that 8.5% (60/698; 95%CI 6.5–10.7) of samples tested positive on the Luminex for GP-EBOV-m, 9.4% (66/698;95%CI 7.5–11.8) for GP- EBOV-kis, 9.4% (87/698;95%CI10.3–14.9) for VP40-EBOV-m, and 1.3% (9/698;95%CI0.6–2.6) for NP-EBOV-m (Table 3). The seroreactivity to at least two EBOV antigens using Luminex was encountered in 1.4% (10/698;95%CI0.7–2.6) and 0.3% (2/698;95%CI0.0–1.0) of sera for VP40-EBOV-m + GP-EBOV-m and VP40-EBOV-m + NP-EBOV-m respectively. No sera tested positive for NP-EBOV-m+GP-EBOV-m.

Table 3. Seroprevalence for different (combinations of) antibodies against Ebola virus antigens as measured by the Luminex or FANG ELISA in Health care providers from Boende, DRC.

Antigen
*Cutoff
Positives
n (N)
Seroprevalence
% (95% conf. Int.)
Age /year M vs F Direct Contact with patients: Direct vs indirect Working Hospital vs elsewhere Experienced Ebola outbreak/patients vs others
p-value p-value (p-value) (p-value) p-value
FANG ELISA GP-EBOV-k 526 EU/ml 49 (693) 7.0 (6.5, 10.9) 0.89 0.44 0.52 0.93 0.94
Luminex GP-EBOV-m 669 MFI/100 beads 60 (698) 8.6 (6.5,10.7) 0.03 0.93 0.05 0.63 0.09
GP-EBOV-kis 670 MFI/100 beads 66 (698) 9.4 (7.5,11.8) 0.05 0.99 0.05 0.52 0.005
VP40-EBOV-m 441 MFI/100 beads 87 (698) 12.4 (10.3,14.9) 0.11 0.07
0.31 0.74 0.46
NP-EBOV-m 602 MFI/100 beads 9 (698) 1.3 (0.6,2.6) 0.41 0.40 0.13 0.26 0.07
GP-EBOV-m+NP-EBOV-m C1 0 (698) 0
GP-EBOV-m+VP40-EBOV-m C2 10 (698) 1.4 (0.7,2.6) 0.75 0.02 0.39 0.68 0.47
NP-EBOV-m+VP40-EBOV-m C3 2 (698) 0.3 (0.0,1.0)
Luminex and FANG ELISA GP-EBOV-m + GP-EBOV-k C4 6 (693) 0.8 (0.1,1.5)

C1 = 669MFI/100 beads for GP-EBOV-m and 602 MFI/100 beads for NP-EBOV-m.

C2 = 669MFI/100 beads for GP-EBOV-m and 441 MFI/100beads fo VP40-EBOV-m.

GP-EBOV-k seroreactivity on the FANG ELISA was found in 7% (49/693; 95%CI6.5–10.9) of participants’ sera. Looking at participants whose GP-EBOV seroreactivity was identified in both Luminex and FANG ELISA, 0.8% (6/693; 95%CI0.1–1.5) of the tested samples were positive by a combination of the Luminex and FANG ELISA assays. We performed seroreactivity analyses using cutoffs determined in the literature and found similar results as depicted in the (S4 Table).

A weak correlation between the FANG ELISA and Luminex was shown (k = 0.2) (Fig 1).

Fig 1. Pearson correlation between FANG ELISA and Luminex.

Fig 1

Seroreactivity against the glycoprotein (GP) of Ebola virus in health care providers and frontliners from Boende. (A) The X-axis reports the log values of the antibody titers (IgG) as measured by Luminex in MFI/100 beads. (B) Y-axis represents antibody titers as measured by FANG ELISA in EU/ml. (C) The vertical dashed line in red represents the cutoff of the changepoint analysis and the dashed horizontal line in green represents the cutoff obtained from previous studies.

In seeking which participant characteristics influenced seropositivity, we observed significant differences in the seropositivity rate between HCPs and frontliners who previously made direct contact with an Ebola patient or experienced an outbreak in their hometown. When looking at the GP-EBOV-k antigen, HCPs and frontliners who previously became into contact with Ebola were significantly less likely to be seropositive compared to HCPs and frontliners who never experienced an Ebola outbreak (estimate = -1.22, std. error = 0.52, P = 0.02). When looking at the GP-EBOV-m, seropositivity status significantly decreased with age (estimate = -0.02, est.error = 0.01, P = 0.04).

Discussion

We report the baseline seroreactivity to EBOV-m antigens in apparently healthy HCPs and frontliners enrolled in the EBL2007 vaccine trial.

Based on seroreactivity in two different assay formats (FANG ELISA and Luminex), only a minority (0.8%) of HCPs and frontliners blood samples seroreacted to the GP-EBOV-m and GP-EBOV-k surface antigen. Similarly, a minority of participants sera tested positive to at least two antigens on the Luminex (0.3% for NP+VP40 EBOV-m and 1.4 for GP-EBOV-m+VP40-EBOV-m). None of the participants sera tested positive to GP-EBOV-m+NP-EBOV-m.

Additionally, when we investigated whether seropositivity correlated with participants’ prior exposure to EBOV-m, we did not observe a relevant positive correlation. This suggests that the majority of seropositive participants implied based on the single antigen using FANG or Luminex assays analysis are in fact false positives.

Unexpectedly, HCPs and frontliners participants who made previous contact with an Ebola case were less likely to be EBOV-seropositive than those who never became into contact. This result also suggests that the FANG ELISA is less suitable for seroepidemiological studies in African populations. Indeed, while the detection limit of the FANG ELISA (36–11 EU/mL) was established based on non-African samples, the limit needs to be increased in the African population. In this context, the Luminex multiplex assay might be much more suitable due to the use of multiple antigens that increase the specificity [40].

Overall, these results suggest that the baseline seroprevalence against EBOV-m in HCPs and frontliners in Boende is very low. Our seroprevalence estimates are much lower compared to previous serosurveys conducted after the EVD outbreak of 2014 in HCP of Boende Health District (22.5% and 28%) (GP-EBOV-m seroreactivity using ELISA) [12,27]. Our estimates are also lower than the one previously reported in Boende Health District among the general population (7%) (GP-EBOV-m seroreactivity using ELISA) a year after the 2014 Ebola epidemic [22]. The seroprevalence based on one EBOV-m antigen (GP-EBOV-m) found in this study using either ELISA or Luminex is lower than other previously reported in the Watsa Pygmy population of DRC in 2002 (18.7%) (GP-EBOV-m seroreactivity using ELISA) and the Sankuru rural population in 2007 (11%) (GP-EBOV-m seroreactivity using ELISA) [8,21].

By employing this approach, our seroprevalence estimates became comparable to those of previous serological surveys conducted in Kikwit (2.2%) (GP-EBOV-m seroreactivity by ELISA) and Kinshasa (2%) (GP-EBOV-m seroreactivity by luciferase immunoprecipitation system + neutralization) [18,41].

It is worth noting that LUMINEX built on an approach of simultaneously targeting multiple EBOV antigens, demonstrated a specificity (99.1%) and a sensitivity (95.7%) similar to higher than, respectively, the specificity (100%) and sensitivity (92.5%) of the commercial ELISA in a study [32]. The FANG ELISA was developed and validated to quantify Filovirus anti-GP-EBOV immunoglobulin G (IgG) binding antibodies in human and non-human primate serum sample to enable bridging of immunogenicity data between humans and animal models in vaccine trials [37].

The higher seroprevalences found in other serosurveys conducted in Boende or elsewhere in the DRC may be explained by the fact that different assays were used in the different studies, other cutoff algorithms were used, and the definition of reactivity discrimination (one or two EBOV antigens) may have decreased the specificity of these assays. This could have led to overestimation of EBOV antigen seropositivity. On the other hand, it cannot be ruled out that more people were indeed infected during the 2014 outbreak in Boende and that antibody titers waned over time or at least dropped below the detection threshold, explaining the low seroprevalence that we observed. However, a number of other studies have shown IgG positivity typically prolonged to more than 10 years after an EBOV declared epidemic in an area [42,43]. It is unclear if the high compliance with infection prevention and control measures may have led to the low seroprevalence of the majority of HCPs and frontliners participants in the EBL2007 vaccine trial and serosurvey during the 2014 epidemic. This would have kept them free of EBOV exposure and might explain the low seroprevalence.

Likewise, this low prevalence may reflect a rare incidence of asymptomatic EBOV infection among HCP and frontliner population from the Boende Health District. The previous scenario may reflect a susceptibility to future outbreaks of EBOV. Yet, negative antibody titers do not rule out other types of immunity, such as T-cell immunity [44].

FANG ELISA or Luminex are assays that can only detect binding antibodies and are unable to differentiate them from neutralizing antibodies [37]. The latter are typically detected using neutralization assays, which are still considered the gold standard for serological testing [45,46]. However, such testing involves infectious cells, are labour intensive and time consuming [47]. For viruses such as EBOV, all experiments should be performed under a biosafety laboratory (BSL)-4 conditions, which are limited in availability and expensive to operate [48]. Thus, it is beneficial to use alternative neutralization assays that do not require viruses or live cells, and that can be performed in BSL-2 laboratories to assess neutralizing antibody capacity [47,49]. These alternative assays should conclude if a person with high binding antibodies against EBOV (based on FANG ELISA or Luminex) was indeed infected with the virus (although some level of cross-reactivity can never be ruled out) [29]. The challenge of comparing different serosurveys that have assessed the EBOV seroprevalence makes the implementation of international standardization of units for EBOV antibody detection and quantification of paramount importance [50].

The poor linear relationship between the two assays used (FANG ELISA and Luminex) in this serosurvey confirms that both assays likely contain many false positive results, when using single antigens. Hence, the reported seropositivity could be an effect of other filoviruses or infectious microbes, which may cause cross-reactions [51].

Limitations of our study are the lack of positive and negative control samples to determine the positive cutoff and relative long timing since the outbreak (6 years). However, in the absence of a standard serological assay for EBOV seroreactivity, Luminex can still be employed in serosurveys due to its ability to detect seroreactivity to combinations of different EBOV antigens [32].

The strength of this survey resides in the use of high cutoffs to determine the EBOV seropositivity that aligns with recommendations in EBOV serosurveys generally applied to Congolese cohorts [18,28,52]. Thus, the combination of FANG ELISA and Luminex results can be considered a starting point, showing how previous serological surveys may have overestimated the seroprevalence of EBOV in a non-exempt area. Like the recent index case of the fourteenth outbreak in DRC (Mbandaka, 2022), whose symptoms began three weeks after returning from Boende with no notion of contact with an Ebola survivor [5]. The next step could be the use of a neutralization assay for assessment of neutralizing antibodies among this population of HCP and frontliners participants in the EBL2007 trial, to further document whether or not this population of HCP is naive to EBOV exposure. Alternatively, an assessment of EBOV seroprevalence in a different population cohort closer to the time of an EVD outbreak, using negative controls, may provide insight into the utility of using Luminex or other multiple assays as the gold standard in EBOV seropositivity investigations.

The low baseline seroreactivity to EBOV antigens observed in HCP and frontliner population of Boende suggests that the majority of this population never came into contact with the virus, despite the fact the many HCP and frontliners worked during previous EBV outbreak in 2014. In the event of a future epidemic, mathematical models suggested that the vaccination rate of HCP in an infected area should be at least (30%) to prevent a major epidemic [53]. Therefore it is clear that HCP in endemic regions should be primary targets for vaccination in the frame of the Ebola epidemic preparedness plan in DRC [53].

Conclusion

In contrast to previous studies that observed high seroreactivity against EBOV-m in Boende, our results show that the baseline seroprevalence of HCP and frontliners that reported no previous EBOV infections is low. This suggests that asymptomatic infections are unlikely to occur or that antibodies rapidly wane after infection (or at least drop below the cutoff of detection). Irrespective of the cause, it means that the majority of HCPs in the area are likely susceptible to EVD despite the history of outbreaks in and the area of Boende. Given the high variance between seroprevalence estimates by different studies in the same region, we highlight the need for more uniform antibody assays. Neutralizing antibody quantification methods, which are inexpensive in terms of resources, are likely to be crucial for improving EVD surveillance in this region, given the high background of concomitant parasitic disease burden that can be expected to be found in the serum of this population. Low resources affordable approaches to quantifying neutralizing antibodies are likely to be crucial in enhancing surveillance of EVD disease in this region.

Supporting information

S1 Table. This is the baseline demographic data of participants included in the EBL2007 vaccine trial.

(XLSX)

S2 Table. This table presents the amount of GP-EBOV-k antibody titers measured using FANG ELISA assay.

(XLSX)

S3 Table. This table presents the amount of GP-EBOV-m, GP-EBOV-kis, NP-EBOV-m, and VP-EBOV-m antibody titers measured using LUMINEX assay.

(XLSX)

S4 Table. This table presents the EBOV seroprevalence with cut off obtained from literature for different (combinations of) antibodies against Ebola virus antigens as measured by the Luminex or FANG ELISA in Health care providers from Boende, DRC.

(DOCX)

Acknowledgments

The authors gratefully acknowledge the hard work and dedication of the local trial staff. The supportive role of ACE Research, DFNet Research, Q² Solutions and Institut National de Recherche Biomédicale (INRB) and all partners within the EBOVAC3 Consortium is highly appreciated.

Data Availability

All relevant data are within the Supporting information files (S1, S2 and S3).

Funding Statement

• Grant Recipient: Pierre Van Damme and Jean-Pierre Van geertruyden • The full name of each funder: Innovative Medicines Initiative 2, European Union’s Horizon 2020 research and innovation pro-gramme, European Federation of Pharmaceutical Industries and Associations (EFPIA) and the Coalition for Epidemic Preparedness Innovations (CEPI) • URL of each funder website: https://www.imi.europa.eu/about-imi https://ec.europa.eu/research-and-innovation/en/horizon-magazine/mission-transform-our-cities?gclid=Cj0KCQjwmZejBhC_ARIsAGhCqnf0fQ9IULGgu7uwGp7d0Fn2kIJCIwRs0qmVDCemO_0sMpXGqObiXIMaAimMEALw_wcB https://www.efpia.eu/ https://cepi.net/.

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Decision Letter 0

Jean-François Carod

20 Mar 2023

PONE-D-23-03053Low seroprevalence of Ebola virus in health care providers in an endemic region (Tshuapa province) of the Democratic Republic of the CongoPLOS ONE

Dear Dr. Zola Matuvanga,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

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Additional Editor Comments:

Dear Sir,

Here are the comments from the reviewers, please change accordingly and retun with your revised version.

REVIEWER ONE COMMENTS

� MINOR MODIFICATIONS

I greatly enjoyed reading this fascinating manuscript. It provides a much-needed and much-overdue comparison of a multiplex assay to a popularly-used single-antigen assay for EBOV, generated interesting findings that are relevant to important public health and Ebola outbreak-related questions, and provided thought-provoking discussion and comments. I have a few comments, mostly minor.

1. General comment – there are typos throughout the paper, (examples – line 50: “yearswith”; 53: “likley" misspelled, there are others – please review the manuscript thoroughly and correct)

2. Line 287 – “GP-EBOV-m” seroreactivity on the FANG ELISA” – isn’t this supposed to be “GP-EBOV-k” for Kikwit, as described on line 180 of methods and in Table 3?

3. Line 290 “ 0.8% of the tested samples were positive”. Positive by what assay/combination of assays?

4. Lines 303-306: you note that for the GP-EBOV-k antigen – presumably this is the one tested by only the FANG assay, correct? – that HCP’s surveyed as being in previous contact with Ebola were, contrary to expectation, *less*likely to be seropositive to those who had not experienced an EBOV outbreak. This is notable and in and of itself was not discussed in the discussion section. Could this be additional supportive evidence, in addition to the correlation study itself that you performed, that the FANG essay specifically in and of itself is simply not equipped to evaluate serostatus over time? In other words, if not only did the FANG assay not correlate in the expected manner to the environmental survey but had a significant correlation in the *opposing* direction, which was not found by the LUMINEX assay, this would seem to be significant enough evidence that the FANG is simply not a useful assay in this context. If you agree with that point, I think it would be useful to point this out more explicitly in the discussion section.

5. There is a seeming discrepancy between Table 3 (lines 267-270) and the Supplementary Table (596-598). In the former the FANG ELISA antigen is listed as “GP-EBOV-k”, and the Luminex and FANG ELISA antigen is listed as “GP-EBOV-m + GP-EBOV-k” as per the methods, but in the supplement the FANG ELISA antigen is listed as “GP-EBOV-m” and the Luminex and FANG ELISA antigen is listed as “GP-EBOV-m”. Is this because the literature only has FANG ELISA against “GP-EBOV-m” whereas your assay specifically tested it against k? If so, I would clarify that, or if it’s an error, would correct it. Also the Luminex in the supplement has “GP-EBOV-k” and in Table 3 it is “GP-EBOV-kis” – not sure if those stand for the same thing but would just confirm.

6. As per comment #5, on line 323 you write “based on seroreactivity in two difference assay formats (FANG ELISA and Luminex), only a minority (0.8%) of HCPs and frontliners blood samples seroreacted to the GP-EBOV-m surface antigen.” But I thought you didn’t test the FANG ELISA against the m sAg, only the k? Please clarify.

7. It is notable that the 0.8% seroprevalence between Luminex and FANG ELISA (for whatever antigen – as per above this is unclear to me) is the same in Table 3 and Supplementary Table. This would seem to be another argument – replicability of your own findings with those based on literature cutoffs – that strengthens your argument regarding how little overlap there is between these assays. If I interpreted this correctly and you are in agreement, I would call this out more openly, as it is further evidence in support of your claims.

8. Lines 329-331 “This suggests that the majority of seropositive participants implied on the basis of the single antigen analysis are in fact false positives” – does this hold not only for FANG but also for the single-antigen Luminex analysis? If so I would just clarify that.

9. Why did you conduct the survey -- which asks questions about the past (i.e., Boende/2014-era) contacts – 1 year into the EBL2007 vaccine trial? Another way of asking: why not just ask the survey up front, when you did the serosurvey? This would presumably limit additional recollection bias, no? Some explanation seems to be needed here.

10. Related to the above, regardless of when you were conducting the survey, would note the issue of recollection bias as part of the survey conducted a year into the vaccine trial (5-6+ years after the Boende outbreak).

11. 76.5% of participants were male – would note this in the discussion as a (probably minor, but nevertheless) limitation to generalizability. Would also touch on other types of biases that may have been present in recruiting a cohort that is already participating in a vaccine trial – things like well bias, self-selection bias.

12. Lines 359-361: “it cannot be ruled out that more people were indeed infected during the 2014 outbreak in Boende and that antibody titers waned over time or at least dropped below the detection threshold, explaining the low seroprevalence that we observed.” – This is theoretically a fair argument however several longer-term studies although with smaller n have shown typically prolonged IgG positivity (Wauquier N, Becquart P, Gasquet C, Leroy EM. Immunoglobulin G in Ebola outbreak survivors, Gabon. Emerg Infect Dis. 2009 Jul;15(7):1136-7; Thomas G. Ksiazek, Cynthia P. West, Pierre E. Rollin, Peter B. Jahrling, C. J. Peters, ELISA for the Detection of Antibodies to Ebola Viruses, The Journal of Infectious Diseases, Volume 179, Issue Supplement_1, February 1999, Pages S192–S198). While you’re correct to say it cannot be ruled out, it is not necessarily the likeliest argument either – you could clarify this if you choose

13. Lines 416-418: you say that the next step would be more uniform antibody assays, and also neutralizing antibody quantification methods. However, you omit mention of another next step, which would be to do the study again, possibly with a different cohort, but both closer to the time of the outbreak and with negative controls. If your findings here were replicated, this would provide strong rationale for the Luminex itself or other similar multiplex assays as a leading candidate to be adopted as a gold standard for serosurvey purposes.

REVIEWER 2 COMMENTS

� MAJOR MODIFICATIONS

1) The seropositivity is lower as compared to the previous studies where different kits were used. Did authors run some preliminary study on reference samples to compare the sensitivity and specificity of the testing assays they used with the testing assays/kits used by other investigators?

2) If not, could authors try their archived samples with the other testing assays/kits to compare the results with those obtained by authors in this study?

3) Check spelling. For example, line 123 – “targets”

Kind regards,

Dr Jean-François Carod

jfcarod@yahoo.es

PLOS ONE

[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Is the manuscript technically sound, and do the data support the conclusions?

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Reviewer #1: Yes

Reviewer #2: Partly

**********

2. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: I Don't Know

Reviewer #2: Yes

**********

3. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #2: Yes

**********

4. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #2: Yes

**********

5. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: I greatly enjoyed reading this fascinating manuscript. It provides a much-needed and much-overdue comparison of a multiplex assay to a popularly-used single-antigen assay for EBOV, generated interesting findings that are relevant to important public health and Ebola outbreak-related questions, and provided thought-provoking discussion and comments. I have a few comments, mostly minor.

1. General comment – there are typos throughout the paper, (examples – line 50: “yearswith”; 53: “likley" misspelled, there are others – please review the manuscript thoroughly and correct)

2. Line 287 – “GP-EBOV-m” seroreactivity on the FANG ELISA” – isn’t this supposed to be “GP-EBOV-k” for Kikwit, as described on line 180 of methods and in Table 3?

3. Line 290 “ 0.8% of the tested samples were positive”. Positive by what assay/combination of assays?

4. Lines 303-306: you note that for the GP-EBOV-k antigen – presumably this is the one tested by only the FANG assay, correct? – that HCP’s surveyed as being in previous contact with Ebola were, contrary to expectation, *less*likely to be seropositive to those who had not experienced an EBOV outbreak. This is notable and in and of itself was not discussed in the discussion section. Could this be additional supportive evidence, in addition to the correlation study itself that you performed, that the FANG essay specifically in and of itself is simply not equipped to evaluate serostatus over time? In other words, if not only did the FANG assay not correlate in the expected manner to the environmental survey but had a significant correlation in the *opposing* direction, which was not found by the LUMINEX assay, this would seem to be significant enough evidence that the FANG is simply not a useful assay in this context. If you agree with that point, I think it would be useful to point this out more explicitly in the discussion section.

5. There is a seeming discrepancy between Table 3 (lines 267-270) and the Supplementary Table (596-598). In the former the FANG ELISA antigen is listed as “GP-EBOV-k”, and the Luminex and FANG ELISA antigen is listed as “GP-EBOV-m + GP-EBOV-k” as per the methods, but in the supplement the FANG ELISA antigen is listed as “GP-EBOV-m” and the Luminex and FANG ELISA antigen is listed as “GP-EBOV-m”. Is this because the literature only has FANG ELISA against “GP-EBOV-m” whereas your assay specifically tested it against k? If so, I would clarify that, or if it’s an error, would correct it. Also the Luminex in the supplement has “GP-EBOV-k” and in Table 3 it is “GP-EBOV-kis” – not sure if those stand for the same thing but would just confirm.

6. As per comment #5, on line 323 you write “based on seroreactivity in two difference assay formats (FANG ELISA and Luminex), only a minority (0.8%) of HCPs and frontliners blood samples seroreacted to the GP-EBOV-m surface antigen.” But I thought you didn’t test the FANG ELISA against the m sAg, only the k? Please clarify.

7. It is notable that the 0.8% seroprevalence between Luminex and FANG ELISA (for whatever antigen – as per above this is unclear to me) is the same in Table 3 and Supplementary Table. This would seem to be another argument – replicability of your own findings with those based on literature cutoffs – that strengthens your argument regarding how little overlap there is between these assays. If I interpreted this correctly and you are in agreement, I would call this out more openly, as it is further evidence in support of your claims.

8. Lines 329-331 “This suggests that the majority of seropositive participants implied on the basis of the single antigen analysis are in fact false positives” – does this hold not only for FANG but also for the single-antigen Luminex analysis? If so I would just clarify that.

9. Why did you conduct the survey -- which asks questions about the past (i.e., Boende/2014-era) contacts – 1 year into the EBL2007 vaccine trial? Another way of asking: why not just ask the survey up front, when you did the serosurvey? This would presumably limit additional recollection bias, no? Some explanation seems to be needed here.

10. Related to the above, regardless of when you were conducting the survey, would note the issue of recollection bias as part of the survey conducted a year into the vaccine trial (5-6+ years after the Boende outbreak).

11. 76.5% of participants were male – would note this in the discussion as a (probably minor, but nevertheless) limitation to generalizability. Would also touch on other types of biases that may have been present in recruiting a cohort that is already participating in a vaccine trial – things like well bias, self-selection bias.

12. Lines 359-361: “it cannot be ruled out that more people were indeed infected during the 2014 outbreak in Boende and that antibody titers waned over time or at least dropped below the detection threshold, explaining the low seroprevalence that we observed.” – This is theoretically a fair argument however several longer-term studies although with smaller n have shown typically prolonged IgG positivity (Wauquier N, Becquart P, Gasquet C, Leroy EM. Immunoglobulin G in Ebola outbreak survivors, Gabon. Emerg Infect Dis. 2009 Jul;15(7):1136-7; Thomas G. Ksiazek, Cynthia P. West, Pierre E. Rollin, Peter B. Jahrling, C. J. Peters, ELISA for the Detection of Antibodies to Ebola Viruses, The Journal of Infectious Diseases, Volume 179, Issue Supplement_1, February 1999, Pages S192–S198). While you’re correct to say it cannot be ruled out, it is not necessarily the likeliest argument either – you could clarify this if you choose

13. Lines 416-418: you say that the next step would be more uniform antibody assays, and also neutralizing antibody quantification methods. However, you omit mention of another next step, which would be to do the study again, possibly with a different cohort, but both closer to the time of the outbreak and with negative controls. If your findings here were replicated, this would provide strong rationale for the Luminex itself or other similar multiplex assays as a leading candidate to be adopted as a gold standard for serosurvey purposes

Reviewer #2: 1) The seropositivity is lower as compared to the previous studies where different kits were used. Did authors run some preliminary study on reference samples to compare the sensitivity and specificity of the testing assays they used with the testing assays/kits used by other investigators?

2) If not, could authors try their archived samples with the other testing assays/kits to compare the results with those obtained by authors in this study?

3) Check spelling. For example, line 123 – “targets”

**********

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Reviewer #1: No

Reviewer #2: No

**********

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PLoS One. 2023 Sep 1;18(9):e0286479. doi: 10.1371/journal.pone.0286479.r002

Author response to Decision Letter 0


20 Apr 2023

Editor(s)' Comments to Author

MINOR MODIFICATIONS

I greatly enjoyed reading this fascinating manuscript. It provides a much-needed and much-overdue comparison of a multiplex assay to a popularly-used single-antigen assay for EBOV, generated interesting findings that are relevant to important public health and Ebola outbreak-related questions, and provided thought-provoking discussion and comments. I have a few comments, mostly minor.

R/ Thank you for the opportunity to revise our paper on ‘Low seroprevalence of Ebola virus in health care providers in an endemic region (Tshuapa province) of the Democratic Republic of the Congo.’ We appreciate your insightful comments on revising the paper.

1. General comment – there are typos throughout the paper, (examples – line 50: “yearswith”; 53: “likley" misspelled, there are others – please review the manuscript thoroughly and correct)

R/ Thank you so much for catching these typos, which have been corrected. We have gone through the entire manuscript carefully and adjusted accordingly.

2. Line 287 – “GP-EBOV-m” seroreactivity on the FANG ELISA” – isn’t this supposed to be “GP-EBOV-k” for Kikwit, as described on line 180 of methods and in Table 3?

R/ It should be ‘GP EBOV-k’. It is adjusted accordingly. Line 294

3. Line 290 “0.8% of the tested samples were positive”. Positive by what assay/combination of assays?

R/ We lengthened the sentence a bit by adding “0.8% of the tested samples were positive by a combination of the Luminex and FANG ELISA assays”. Line 297

4. Lines 303-306: you note that for the GP-EBOV-k antigen – presumably this is the one tested by only the FANG assay, correct? – that HCP’s surveyed as being in previous contact with Ebola were, contrary to expectation, *less*likely to be seropositive to those who had not experienced an EBOV outbreak. This is notable and in and of itself was not discussed in the discussion section. Could this be additional supportive evidence, in addition to the correlation study itself that you performed, that the FANG essay specifically in and of itself is simply not equipped to evaluate serostatus over time? In other words, if not only did the FANG assay not correlate in the expected manner to the environmental survey but had a significant correlation in the *opposing* direction, which was not found by the LUMINEX assay, this would seem to be significant enough evidence that the FANG is simply not a useful assay in this context. If you agree with that point, I think it would be useful to point this out more explicitly in the discussion section.

R/ Thank you for this excellent observation. We have added following sentences in the discussion highlighting that FANG ELISA as single-antigen assay for EBOV is not enough equipped to evaluate sero status over time:

“Unexpectedly, HCPs and frontliners participants who made previous contact with an Ebola case were less likely to be EBOV-seropositive than those who never became into contact. This result also suggests that the FANG ELISA is less suitable for seroepidemiological studies in African populations. Indeed, while the detection limit of the FANG ELISA (36-11 EU/mL) was established based on non-African samples, this limit needs to be increased in the African population (line 341-348).

5. There is a seeming discrepancy between Table 3 (lines 267-270) and the Supplementary Table (596-598). In the former the FANG ELISA antigen is listed as “GP-EBOV-k”, and the Luminex and FANG ELISA antigen is listed as “GP-EBOV-m + GP-EBOV-k” as per the methods, but in the supplement the FANG ELISA antigen is listed as “GP-EBOV-m” and the Luminex and FANG ELISA antigen is listed as “GP-EBOV-m”. Is this because the literature only has FANG ELISA against “GP-EBOV-m” whereas your assay specifically tested it against k? If so, I would clarify that, or if it’s an error, would correct it. Also, the Luminex in the supplement has “GP-EBOV-k” and in Table 3 it is “GP-EBOV-kis” – not sure if those stand for the same thing but would just confirm.

R/ Thank you very much for catching this confusing error that is adjusted. The discrepancy between Table 3 and the supplementary Table is lifted.

6. As per comment #5, on line 323 you write “based on seroreactivity in two difference assay formats (FANG ELISA and Luminex), only a minority (0.8%) of HCPs and frontliners blood samples seroreacted to the GP-EBOV-m surface antigen.” But I thought you didn’t test the FANG ELISA against the m sAg, only the k? Please clarify.

R/ Adjusted accordingly. This percentage is related to both antigens GP-BOV (GP-EBOV-k +GP-EBOV-m) as tested by FANG and Luminex respectively. Line 295

7. It is notable that the 0.8% seroprevalence between Luminex and FANG ELISA (for whatever antigen – as per above this is unclear to me) is the same in Table 3 and Supplementary Table. This would seem to be another argument – replicability of your own findings with those based on literature cutoffs – that strengthens your argument regarding how little overlap there is between these assays. If I interpreted this correctly and you are in agreement, I would call this out more openly, as it is further evidence in support of your claims.

R/ We agree and have added the following sentence in the discussion to support that our findings are replicable with those of previous literature: “The 0.8% seroprevalence of GP-EBOV between Luminex and FANG ELISA, regardless of the used cutoff, seems to be an additional argument further evidence in support of our claims” (Line 341-343).

8. Lines 329-331 “This suggests that the majority of seropositive participants implied on the basis of the single antigen analysis are in fact false positives” – does this hold not only for FANG but also for the single-antigen Luminex analysis? If so, I would just clarify that.

R/ Yes, it does hold for both FANG and Luminex. It is adjusted (Line 340).

9. Why did you conduct the survey -- which asks questions about the past (i.e., Boende/2014-era) contacts – 1 year into the EBL2007 vaccine trial? Another way of asking: why not just ask the survey up front, when you did the serosurvey? This would presumably limit additional recollection bias, no? Some explanation seems to be needed here.

R/ A sentence is adjusted in the discussion to reflect this further potential recollection bias in data collection.

Limitations of our study are the lack of positive and negative control samples to determine the positive cutoff and relative long timing since the outbreak (6 years). (Line 401-402).

10. Related to the above, regardless of when you were conducting the survey, would note the issue of recollection bias as part of the survey conducted a year into the vaccine trial (5-6+ years after the Boende outbreak).

R/ This further limitation is now reflected in the discussion section. Line 408-409.

11. 76.5% of participants were male – would note this in the discussion as a (probably minor, but nevertheless) limitation to generalizability. Would also touch on other types of biases that may have been present in recruiting a cohort that is already participating in a vaccine trial – things like well bias, self-selection bias.

R/ Given that the number of male genders represents almost 2/3 of the total number of registered health care providers and frontliners in the DRC. This notwithstanding, we therefore believe that our sample was representative of the health care workers in the DRC.

12. Lines 359-361: “it cannot be ruled out that more people were indeed infected during the 2014 outbreak in Boende and that antibody titers waned over time or at least dropped below the detection threshold, explaining the low seroprevalence that we observed.” – This is theoretically a fair argument however several longer-term studies although with smaller n have shown typically prolonged IgG positivity (Wauquier N, Becquart P, Gasquet C, Leroy EM. Immunoglobulin G in Ebola outbreak survivors, Gabon. Emerg Infect Dis. 2009 Jul;15(7):1136-7; Thomas G. Ksiazek, Cynthia P. West, Pierre E. Rollin, Peter B. Jahrling, C. J. Peters, ELISA for the Detection of Antibodies to Ebola Viruses, The Journal of Infectious Diseases, Volume 179, Issue Supplement_1, February 1999, Pages S192–S198). While you’re correct to say it cannot be ruled out, it is not necessarily the likeliest argument either – you could clarify this if you choose.

We agree and have chosen to clarify this statement (on the waning immunity as possible explanation of the low seroprevalence) by adding following sentences in the discussion to put the emphasize on another argument in favour of the low seroprevalence in our serosurveyed population:

However, a number of other studies have shown IgG positivity typically prolonged to more than 10 years after an EBOV declared epidemic in an area It is unclear if the high compliance with infection prevention and control measures in the 2014 Ebola outbreak may have led to the low seroprevalence of the majority of HCPs and frontliners participants in the EBL2007 vaccine trial and serosurvey during the 2014 epidemic (Line 373-376)

13. Lines 416-418: you say that the next step would be more uniform antibody assays, and also neutralizing antibody quantification methods. However, you omit mention of another next step, which would be to do the study again, possibly with a different cohort, but both closer to the time of the outbreak and with negative controls. If your findings here were replicated, this would provide strong rationale for the Luminex itself or other similar multiplex assays as a leading candidate to be adopted as a gold standard for serosurvey purposes.

Thank you very much this helpful observation. The following sentences are added in the discussion section in regard with the proposed next steps: “Alternatively, an assessment of EBOV seroprevalence in a different population cohort closer to the time of an EVD outbreak, using negative controls, may provide insight into the utility of using Luminex or other multiple assays as the gold standard in EBOV seropositivity investigations” (Line 417-420).

REVIEWER 2 COMMENTS

MAJOR MODIFICATIONS

1) The seropositivity is lower as compared to the previous studies where different kits were used. Did authors run some preliminary study on reference samples to compare the sensitivity and specificity of the testing assays they used with the testing assays/kits used by other investigators?

R/ Thank you very much for this excellent observation that is much appreciated.

We did not run any preliminary study on reference samples for the following reasons:

- A previous study by Ayouba A et al. J Clin Microbiol. 2016 Dec 28;55(1):165-176, already compared the results of the LUMINEX assay to commercial ELISAs (Alpha Diagnostic, San Antonio, TX) using samples from survivors of the EBOV outbreak in Guinea (2014-2016) and negative samples from patients in France. The results of this study showed that the Luminex test had a higher specificity (95.4%: CI95% 89.6-98.0) and similar sensitivity (96.8%: CI95 91.3-98. 9) compared to those of commercial ELISAs when considering seroreactivity to single GP EBOV antigen (specificity of commercial ELISA kits was 92.6(95%CI: 86.1-96.2) and sensitivity was 96.8% (95%CI: 91.3-98.9).

- Another study by Wei Wu et al. Virus Research 2014, 187:84-90 showed lower specificity by ELISA than by using Luminex for serological detection of antibodies specific to viruses causing hemorrhagic fevers. The specificity of the Luminex test ranged from 66 to 100.00% with a sensitivity of 90 to 98%.

- A further study by Logue et al. Journal of virological methods 2018, 255, 84-90 compared FANG ELISA to a commercial ELISA (Alpha Diagnostic International, ADI). FANG ELISA was found to be largely more accurate with less regional background than ADI ELISA (widely used in previous EBOV assays)

Furthermore, a high cutoff estimate using change point analysis (Lardeux, F et al. Memórias do Instituto Oswaldo Cruz 2016, 111: 501-504.) was employed in our study for both Luminex and FANG ELISA to yield a lower GP-EBOV-m seroprevalence value (0.8%, table 3) than in previous studies. Based on this cutoff, the GP-EBOV seroprevalence using FANG and Luminex was similar (0.8% supplement table) to the one found using the literature cut-off (determined based on control samples). Hence, we believe that our findings are likely the real exposure level of these health care providers and frontliners population participants in the EBL2007 vaccine trial who would have been either quite compliant to the promoted infection control prevention measurements during the past epidemic, or who would have had their antibodies lowered over time.

Few sentences are added in the Method section in regard with Luminex and FANG performance. (Line 161-166)

2) if not, could authors try their archived samples with the other testing assays/kits to compare the results with those obtained by authors in this study?

R/Thank you very much for the request.

Given that the assays used in this study have already been validated in other projects, and given also that our study is part of a project involving a large consortium with a budget that is already approaching its end, it will be practically not possible to carry out these analyses, which will necessarily involve logistical and financial constraints that were not foreseen at the beginning of the project.

However, we suggested in the manuscript that this may be explored in future studies (Line 433-436).

3) Check spelling. For example, line 123 – “targets”

R/ Thank you very much for capturing this typo, which is corrected.

Attachment

Submitted filename: Response to the Reviewers.docx

Decision Letter 1

Jean-François Carod

17 May 2023

Low seroprevalence of Ebola virus in health care providers in an endemic region (Tshuapa province) of the Democratic Republic of the Congo

PONE-D-23-03053R1

Dear Dr Matuvanga,

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.

Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication.

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Kind regards,

Jean-François Carod

Academic Editor

PLOS ONE

Additional Editor Comments (optional):

Thanks to have taken all remarks into account.

The result is now publishable.

Acceptance letter

Jean-François Carod

26 May 2023

PONE-D-23-03053R1

Low seroprevalence of Ebola virus in health care providers in an endemic region (Tshuapa province) of the Democratic Republic of the Congo

Dear Dr. Zola Matuvanga:

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department.

If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org.

If we can help with anything else, please email us at plosone@plos.org.

Thank you for submitting your work to PLOS ONE and supporting open access.

Kind regards,

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on behalf of

Dr. Jean-François Carod

Academic Editor

PLOS ONE

Associated Data

    This section collects any data citations, data availability statements, or supplementary materials included in this article.

    Supplementary Materials

    S1 Table. This is the baseline demographic data of participants included in the EBL2007 vaccine trial.

    (XLSX)

    S2 Table. This table presents the amount of GP-EBOV-k antibody titers measured using FANG ELISA assay.

    (XLSX)

    S3 Table. This table presents the amount of GP-EBOV-m, GP-EBOV-kis, NP-EBOV-m, and VP-EBOV-m antibody titers measured using LUMINEX assay.

    (XLSX)

    S4 Table. This table presents the EBOV seroprevalence with cut off obtained from literature for different (combinations of) antibodies against Ebola virus antigens as measured by the Luminex or FANG ELISA in Health care providers from Boende, DRC.

    (DOCX)

    Attachment

    Submitted filename: Response to the Reviewers.docx

    Data Availability Statement

    All relevant data are within the Supporting information files (S1, S2 and S3).


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