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. 2023 Sep 1;26(10):107797. doi: 10.1016/j.isci.2023.107797
REAGENT or RESOURCE SOURCE IDENTIFIER
Biological samples

Sinhala Field Collection from Śrī Laṅkā See Figures 2 and 3 for population names
Śrī Laṅkā Tamils (STS) Field Collection from Śrī Laṅkā See Figures 2 and 3 for population names
Śrī Laṅkā Tamils (UK) 1000 genomes (http://ftp.1000genomes.ebi.ac.uk/vol1/ftp/) See Figures 2 and 3 for population names
World population data Pathak et al.42 See Figures 2 and 3 for population names

Chemicals, peptides, and recombinant proteins

Agarose MERCK Cat# A9539
Tris EDTA Buffer, Molecular Biology Grade Fisher Scientific Cat# AAJ75893AP

Critical commercial assays

DNA extraction Kit Qiagen Cat# 51104
MinElute PCR Purification Kit Qiagen Cat# 28006
Illumina-Infinium Global Screening Array 1.0 (GSA-24v1-0) Cat# 20031669

Deposited data

The Genotype data of Sinhala This study https://doi.org/10.6084/m9.figshare.23975601
The Genotype data of Śrī Laṅkā Tamil This study https://doi.org/10.6084/m9.figshare.23975601

Software and algorithms

PLINK v1.9 Chang et al.44 https://www.cog-genomics.org/plink/1.9/
EIGENSOFT v6.1.4 Patterson et al.45 https://github.com/DReichLab/EIG
ADMIXTURE Alexander et al.46 https://dalexander.github.io/admixture/
ADMIXTOOL Patterson et al.47 https://github.com/DReichLab/AdmixTools
BEAGLE 5.4 Browning et al.48 http://www.gnu.org/licenses/
fineStructure Lawson et al.49 https://people.maths.bris.ac.uk/∼madjl/finestructure/fs-2.1.3.tar.gz
MEGA-X Kumar et al.50 https://www.megasoftware.net/show_eua
ChromoPainter Lawson et al.49 https://people.maths.bris.ac.uk/∼madjl/finestructure/fs-2.1.3.tar.gz
ALDER Loh et al.51 http://cb.csail.mit.edu/cb/alder/alder_v1.03.tar.gz
runs of homozygosity (RoH) Chang et al.44 https://www.cog-genomics.org/plink/1.9/
merged IBD Browning & Browning52 http://www.gnu.org/licenses/
Refined IBD Browning & Browning52 http://www.gnu.org/licenses
mt-DNA nomenclature Van Oven & Kayser53 Phylotree.org