Abstract
Inflammatory responses are fundamental protective warning mechanisms. However, in certain instances, they contribute significantly to the development of several chronic diseases such as cancer. Based on previous studies of truncated 1′-homologated adenosine derivatives, l-nucleosides and their nucleobase-modified quinolone analogues were designed, synthesized, and evaluated for anti-inflammatory activities. The target molecules were synthesized via the key intramolecular cyclization of monotosylate and Mitsunobu condensation from the natural product, d-ribose. All compounds tested and showed potent anti-inflammatory activities, as indicated by their inhibition of LPS-induced IL-1β secretion from the RAW 264.7 macrophages. Gene expressions of pro-inflammatory cytokines showed that all compounds, except 3a and 3b, significantly reduced LPS-induced IL-1β and IL-6 mRNA expressions. The half-maximal inhibitory concentrations (IC50) of 2g and 2h against IL-1β were 1.08 and 2.28 μM, respectively. In contrast, only 2d, 2g, and 3d effectively reversed LPS-induced TNFα mRNA expression. Our mechanistic study revealed that LPS-induced phosphorylation of NF-κB was significantly downregulated by all compounds tested, providing evidence that the NF-κB signaling pathway is involved in their anti-inflammatory activities. Among the compounds tested, 2g and 2h had the most potent anti-inflammatory effects, as shown by the extent of decrease in pro-inflammatory gene expression, protein secretion, and NF-κB phosphorylation. These findings suggest that the l-truncated 1′-homologated adenosine skeleton and its nucleobase-modified analogues have therapeutic potential as treatments for various human diseases by mediating inflammatory processes.
Introduction
Inflammation is the body’s first warning signal of microbial invaders and pathogens. This process involves the release of various signaling molecules, including cytokines, that play vital roles in coordinating the immune response. In particular, inflammation-related cytokines, such as interleukin-1 (IL-1), IL-6, and tumor necrosis factor alpha (TNFα), are a group of signaling molecules involved in regulating inflammation. These cytokines can be produced by various immune cells, such as macrophages, T cells, and B cells.1,2 These cytokines can either promote or inhibit the inflammatory response depending on the specific circumstances. While acute inflammation is a necessary process for tissue repair and pathogen clearance, chronic inflammation can contribute to the development and growth of tumors by promoting genetic mutations, enhancing cell survival and proliferation, and suppressing the immune system.3–7
The search for new anti-inflammatory agents that can target the nuclear factor kappa B (NF-κB) signaling pathway has been intensely researched in recent years.8 NF-κB is a transcription factor that is critical for regulating inflammation, immune response, and cell survival. Aberrant activation of NF-κB is associated with various diseases, including cancer, autoimmune disorders, and chronic inflammatory diseases.9,10 Therefore, developing NF-κB inhibitors is key for the development of therapeutic agents.
Nucleoside analogues are effective therapeutic agents because they can mimic and therefore interfere with natural nucleosides. Since modification of the sugar ring led to clinically relevant results for some nucleoside analogues, one class of nucleoside analogues that has also gained considerable attention is nucleobase-modified nucleosides. It refers to the addition, removal, or relocation of various atoms in the purine ring, resulting in altered physicochemical properties and unique modes of action.11 These changes can alter the effects of hydrogen bonding interactions in enzyme binding sites. Expanding the size of the purine nucleobase is one of the strategies for structural modifications. Such modifications can alter π–π stacking, aromaticity, and polarizability of the heterocyclic base, all of which are important elements of recognition in enzyme binding sites. In this regards, aza/deaza-modified purines have shown promising results in the treatment of viral infections, including HIV, hepatitis B and C, and herpes viruses.12
Previously, we reported that truncated d and l-1′-homologated adenosine derivatives exhibited polypharmacological profiles, such as modulation of peroxisome proliferator-activated receptors (PPARs) and adiponectin production.13–15 In this work, we investigated anti-inflammatory effects of truncated d and l-1′-homologated adenosine derivatives and the synthesis of novel nucleobase-modified derivatives with introduced quinolone and truncated l-1′-homologated adenosine analogues (Figure 1).
Figure 1.
Rationale for the synthesis of truncated l-1′-homologated adenosine derivatives and their quinolone-analogues.
Results and Discussion
Chemistry
To synthesize the final nucleoside analogues, a glycosyl donor 7 was synthesized in five steps from d-ribose and then condensed with a purine base. As shown in Scheme 1, d-ribose was converted to the 2,3-acetonide 4 by using acetone and a catalytic amount of sulfuric acid. The primary hydroxyl group of 4 was protected with the trityl (Tr) group and reduced with NaBH4 to produce diol 5. Regioselective tosylation of the primary alcohol of 5 was followed by tandem intramolecular cyclization to produce the 4-oxo sugar 6.16 Removal of the Tr group of 6 was achieved by treatment with diethylaluminum chloride to produce the key glycosyl donor 7.17 The process of synthesizing the base-condensed intermediates was carried out by treating the glycosyl donor 7 with 2,6-dichloropurine and 6-chloropurine under the Mitsunobu conditions.14,18 The final truncated 1′-homologated adenosine derivatives 2a–2h were obtained by treating 8 or 9 with 3-halobenzylamines, which was followed by acetonide deprotection.
Scheme 1. Synthesis of l-Truncated Homologated 4′-Oxoadenosine Derivatives, 2a–2h.
Reagents and conditions: (a) cat. H2SO4, acetone, rt, 3 h; (b) trityl chloride, DMAP, pyridine/CH2Cl2 (1:1), 40 °C, 12 h; (c) NaBH4, EtOH, rt, 2 h; (d) TsCl, DMAP, pyridine, CH2Cl2, 50 °C, 5 h; (e) Et2AlCl, CH2Cl2, −40 °C, 2 h; (f) 2,6-dichloropurine or 6-chloropurine, PPh3, DIAD, THF, 60 °C, 24 h; (g) 3-halobenzylamines, Et3N, THF, rt, 20 h; and (h) 1 N HCl, MeOH, 60 °C, 28 h.
As illustrated in Scheme 2, we synthesized the nucleobase-modified quinolone analogues in which the purine base is replaced by quinolone for comparison of their biological activities (compounds 3a–3e). The halobenzyloxy quinoline 11a–11e was obtained from 2,6-quinolinediol by chlorination and Williamson ether synthesis. Treatment of 11a–11e with glycosyl donor 7 and t-BuOK in THF at 80 °C gave the base-condensed products, which was treated with 1 N HCl in MeOH at 60 °C to yield the final 3a–3e
Scheme 2. Synthesis of Nucleobase-Modified Quinolone Analogues 3a–3e.
Reagents and conditions: (a) POCl3, MeCN, 80 °C, 23 h; (b) 3-halobenzyl chloride, K2CO3, DMF, 80 °C, 7 h; and (c) (i) 7, t-BuOK, THF, 80 °C, 2 h and (ii) 1 N HCl, MeOH, 60 °C, 14 h.
Evaluation of Pharmacological Profiles of 1, 2a–2h, and 3a–3e
Cell viability was assessed by treating RAW 264.7 cells with 5, 10, 20, 50, and 100 μM of all compounds for 24 h. While some compounds do not show any effects on cell viability in the range of concentrations tested, compounds 1, 2d, 2g, 3a, 3b, and 3e induced cytotoxicity at 100 μM concentration (Figure 2). 3e was the only compound that induced cytotoxicity at 50 μM concentration. Based on these results, a concentration of 20 μM was selected for all subsequent biological analyses.
Figure 2.

MTT colorimetric assay of the active compounds. RAW 264.7 cells were pretreated with 5, 10, 20, 50, and 100 μM active compounds for 24 h, and the data represent the cell viability percentages of RAW 264.7 cells. Values are presented as means ± standard errors. *p < 0.05 compared with the control.
Next, we measured IL-1β secretion in cell culture media as an indication of inflammation. As shown in Figure 3, lipopolysaccharide (LPS)-induced IL-1β secretion was significantly reduced by pretreatment with all of the compounds tested. The lowest concentration of IL-1β was observed by 2b treatment, followed by 2h. The anti-inflammatory potential of the compounds was confirmed by measuring the gene expression of pro-inflammatory cytokines, including IL-1β, IL-6, and TNFα (Figure 4). Results of IL-1β and IL-6 mRNA expression showed that pretreatment with all compounds, except compounds 3a and 3b, significantly reduced LPS-induced gene expressions. Compounds 2f and 2g showed the most potent reduction in IL-1β and IL-6 gene expression. The half-maximal inhibitory concentrations (IC50) of 2g and 2h against IL-1β were 1.08 and 2.28 μM, respectively. In contrast, only compounds 2d, 2g, 3d, and 3e significantly inhibited the LPS-induced TNFα expression.
Figure 3.
Inhibitory effect of active compounds on IL-1β production. RAW 264.7 cells were pretreated with 20 μM active compounds for 2 h, followed by 100 ng/mL LPS for 24 h. An IL-1β ELISA kit was used to check IL-1β production in the media of the RAW 264.7 cells. Values are presented as means ± standard errors. *p < 0.05 compared with the control, †p < 0.05 compared with LPS alone.
Figure 4.
Anti-inflammatory potential of active compounds. RAW 264.7 cells were pretreated with 20 μM active compounds for 2 h, followed by 100 ng/mL LPS for 6 h. Real-time PCR was used to measure the gene expression of (a) IL-1β, (b) IL-6, and (c) TNFα, and quantification was normalized to 18S rRNA levels. Values are presented as the means ± standard errors. *p < 0.05 compared with the control and †p < 0.05 compared with LPS alone.
Finally, a mechanistic study was conducted by the evaluation of the effect of the compounds on the NF-κB signaling pathway. Activation of the signaling pathway, as shown by increased phosphorylation of NF-κB after 5 min LPS treatment, was significantly reduced by 2 h pretreatment with all the compounds tested (Figure 5). Consistent with the results of IL-1β secretion and expression, 2g and 2h inhibited the NF-κB signaling pathway most.
Figure 5.
Inhibitory effect of active compounds on NF-κB pathway activation. RAW 264.7 cells were pretreated with 20 μM active compounds for 2 h, followed by 100 ng/mL LPS treatment for 5 min. Phosphorylated and total NF-κB expression were determined by western blot analysis. Values are presented as the means ± standard errors. *p < 0.05 compared with the control and †p < 0.05 compared with LPS alone.
These results indicate that no substituent at the C2 position on the adenine nucleobase improved biological activity, which means a less sterically hindered and neutral substituent is favored. Notably, in comparison with d-nucleoside 1 and l-nucleoside 2d, l-enantiomer exhibited improved pharmacological activities. Among 3-halobenzyl quinolone analogues, iodine-containing analogue 3d showed potent anti-inflammatory activities, which indicates that electropositivity is an important factor for biological activities.
Activated PPARs regulate the inflammatory response by controlling the expression of several inflammation-related genes.19 Therefore, we investigated the anti-inflammation activities associated with PPARs. In a previous study, compound 2d acted as a PPARγ partial agonist (Ki = 4.3 μM) and a PPARδ antagonist (Ki = 1.0 μM). However, these compounds showed less IL-1β inhibitory effects than compounds 2g and 2h, which have weak PPAR modulating activities. Compounds 3a–3e, possessing moderate anti-inflammatory activities, did not show any PPAR-modulating activities (data not shown). These results suggest a lack of clear correlation between PPARs and anti-inflammation activities of these compounds. The anti-inflammatory effect could be attributed to polypharmacology, wherein these compounds modulate multiple drug targets.20
Conclusions
We have synthesized truncated l-1′-homologated adenosine derivatives and their nucleobase-modified quinolone analogues and evaluated them for anti-inflammatory activities. The target molecules were synthesized via the key intramolecular cyclization of monotosylate and Mitsunobu condensation from the natural product, d-ribose. The nucleobase-modified quinolone analogues were synthesized from 2,6-quinolinediol by chlorination and Williamson ether synthesis. All compounds tested exhibited potent anti-inflammatory activities, indicated by inhibition of LPS-induced IL-1β secretion from RAW 264.7 macrophages. Gene expressions of pro-inflammatory cytokines showed that all compounds except 3a and 3b significantly reduced LPS-induced IL-1β and IL-6 mRNA expressions. The half-maximal inhibitory concentrations (IC50) of 2g and 2h against IL-1β were 1.08 and 2.28 μM, respectively. In contrast, only 2d, 2g, and 3d effectively reversed LPS-induced TNFα mRNA expression. Our mechanistic study revealed that LPS-induced phosphorylation of NF-κB was significantly downregulated by all compounds tested, providing evidence for the involvement of this signaling pathway involved in their anti-inflammatory activity. Among the compounds tested, 2g and 2h had the most potent anti-inflammatory effects, as shown by the extent to which they decreased in pro-inflammatory gene expression, protein secretion, and NF-κB phosphorylation. These findings suggest that the l-truncated 1′-homologated adenosine skeleton and its nucleobase-modified analogues have therapeutic insights for the treatment of inflammation-related diseases. Given the potent anti-inflammatory activities of the truncated l-1′-homologated adenosine skeleton and its nucleobase-modified analogues, the therapeutic effect of these compounds on metabolic diseases could be tested in animal models such as high-fat-diet-induced obese mice or genetically obese db/db type 2 diabetic mice, and the results will be reported elsewhere.
Experimental Section
Chemical Synthesis
General Methods
Proton (1H) and carbon (13C) NMR spectra were obtained on a Bruker AVANCE III HD 400 (400/100 MHz) spectrometer (Bruker, Billerica, MA, USA). Chemical shifts are reported as parts per million (δ) relative to the solvent peak. Coupling constants (J) are reported in hertz (Hz). Mass spectra were recorded on a JMS-T200GC instrument. Optical rotations were determined on a Jasco P-1030 in an appropriate solvent. UV spectra were recorded in methanol or water on a U-3000 instrument (Hitachi High-Technologies Corp., Tokyo, Japan). Melting points were determined on a 6427-H10 Thomas-Hoover melting point apparatus made by Thomas Scientific and were uncorrected. The crude compounds were purified by column chromatography on silica gel (Kieselgel 60, 70-230 mesh, Merck). Elemental analyses (C, H, and N) were used to determine the purity of all synthesized compounds, and the results were within ±0.4% of the calculated values, confirming ≥95% purity.
(3aR,6R,6aR)-6-(Hydroxymethyl)-2,2-dimethyltetrahydrofuro[3,4-d][1,3]dioxol-4-ol (4)
To a stirred suspension of d-ribose (10.0 g, 66.6 mmol) in acetone (333.0 mL, 0.2 M) was added dropwise conc. sulfuric acid (0.3 mL) at room temperature, and the reaction mixture was stirred at the same temperature for 3 h. The mixture was neutralized with solid NaHCO3, filtered, and evaporated under reduced pressure to give a colorless syrup. The residue was purified by silica gel column chromatography (n-hexanes/EtOAc = 1:2) to give 4 as a colorless syrup (10.2 g, 81%): [α]D25 = −14.0 (c 0.46, MeOH); 1H NMR (CD3OD, 400 MHz): δ 5.26 (s, 1H), 4.77 (d, J = 6.0 Hz, 1H), 4.52 (d, J = 6.0 Hz, 1H), 4.19 (irregular t, J = 4.4, 5.2 Hz, 1H), 3.63 (dd, J = 4.8, 12.0 Hz, 1H), 3.59 (dd, J = 5.6, 12.0, 1H), 1.44 (s, 3H), 1.31 (s, 3H); Anal. Calcd for C8H14O5: C, 50.52; H, 7.42. Found: C, 50.48; H, 7.36.
(3aR,6R,6aR)-2,2-Dimethyl-6-((trityloxy)methyl)tetrahydrofuro[3,4-d][1,3]dioxol-4-ol (5)
To a stirred solution of 4 (9.7 g, 50.9 mmol) in anhydrous CH2Cl2 (254.5 mL, 0.2 M) was added trityl chloride (28.4 g, 101.8 mmol), 4-dimethylaminopyridine (1.8 g, 15.3 mmol), and pyridine (12.3 mL, 152.7 mmol) at 0 °C, and the mixture was stirred with heating at 40 °C under a N2 atmosphere. After being stirred for 12 h, the mixture was cooled, diluted with EtOAc, washed with saturated NH4Cl solution and brine, and evaporated. To a stirred solution of the crude intermediate in methanol (170.0 mL, 0.2 M) was added portionwise sodium borohydride (4.0 g, 105.7 mmol) at 0 °C under a N2 atmosphere. After being stirred for 2 h, the mixture was evaporated, and the resulting white suspension was diluted with EtOAc and washed with saturated NH4Cl solution and brine. The separated organic layer was evaporated, and the residue was purified by silica gel column chromatography (n-hexanes/EtOAc = 3:1) to give diol 5 (15.4 g, 70% for two steps) as a syrup: [α]D25 = −38.0 (c 0.044, MeOH); 1H NMR (CDCl3, 400 MHz): δ 7.42–7.36 (m, 6H), 7.35–7.23 (m, 9H), 5.74 (dd, J = 4.0, 11.3 Hz, 0.4H), 5.33 (d, J = 9.2 Hz, 0.6H), 4.78 (d, J = 5.88 Hz, 0.6H), 4.74 (dd, J = 4.0, 6.2 Hz, 0.4H), 4.66 (d, J = 5.9 Hz, 0.6H), 4.58 (d, J = 6.2 Hz, 0.4H), 4.35 (t, J = 3.3 Hz, 0.6H), 4.19 (s, 0.4H), 3.99 (d, J = 11.3 Hz, 0.4H), 3.89 (d, J = 9.2 Hz, 0.6H), 3.43 (ddd, J = 3.3, 10.3, 12.7 Hz, 1H), 3.34 (dd, J = 3.7, 10.3 Hz, 0.6H), 3.01 (dd, J = 2.8, 10.2 Hz, 0.4H), 1.55 (s, 1H), 1.48 (s, 2H), 1.36 (d, J = 9.1 Hz, 3H). Anal. Calcd for C27H28O5: C, 74.98; H, 6.53. Found: C, 74.68; H, 6.26.
(3aR,4R,6aS)-2,2-Dimethyl-4-((trityloxy)methyl)tetrahydrofuro[3,4-d][1,3]dioxole (6)
To a cooled (0 °C) solution of 5 (12.8 g, 29.6 mmol) in anhydrous pyridine/CH2Cl2 (1:1, total 99 mL, 0.3 M) was added 4-toluenesulfonyl chloride (71.3 g, 59.1 mmol, 2 equiv) and 4-dimethylaminopyridine (0.36 g, 3.0 mmol, 0.1 equiv) under a N2 atmosphere. After the reaction mixture was stirred with heating (50 °C) for 5 h, the reaction mixture was cooled and quenched with a saturated ammonium chloride solution. The organic layer was washed with brine, dried with anhydrous MgSO4, and evaporated. The residue was purified by silica gel column chromatography (n-hexanes/EtOAc = 30:1) to give 6 as a colorless syrup (10.5 g, 85%): [α]D25 = −84.5 (c 0.1, MeOH); 1H NMR (CDCl3, 500 MHz): δ 7.40 (d, J = 7.5 Hz, 6H), 7.29 (dd, J = 7.3, 15.2 Hz, 6H), 7.20–7.25 (m, 3H), 4.87 (t, J = 5.1 Hz, 1H), 4.64 (d, J = 6.1 Hz, 1H), 4.20 (dd, J = 3.8, 7.7 Hz, 1H), 4.15 (dd, J = 4.3, 10.2 Hz, 1H), 4.04 (d, J = 10.2 Hz, 1H), 3.25 (dd, J = 4.0, 10.0 Hz, 1H), 3.09 (dd, J = 4.3, 10.0 Hz, 1H), 1.50 (s, 3H), 1.32 (s, 3H); 13C NMR (CDCl3, 125 MHz): δ 143.6, 128.6, 127.8, 127.0, 112.3, 87.0, 84.0, 83.0, 81.6, 74.3, 64.5, 26.6, 25.0; Anal. Calcd for C27H28O4: C, 77.86; H, 6.78. Found: C, 77.65; H, 6.59.
((3aR,4R,6aS)-2,2-Dimethyltetrahydrofuro[3,4-d][1,3]dioxol-4-yl)methanol (7)
To a cooled (−40 °C) solution of 6 (10.5 g, 25.2 mmol) in anhydrous CH2Cl2 (126 mL, 0.2 M) was added dropwise diethylaluminum chloride 1.0 M solution in hexanes (75.6 mL, 75.6 mmol, 3 equiv) under a N2 atmosphere. After the reaction mixture was stirred at the same temperature for 2 h, the mixture was quenched with saturated potassium sodium tartrate solution and stirred for an additional 1 h. The organic layer was washed with brine, dried with anhydrous MgSO4, and evaporated at 5 °C. The residue was purified by silica gel column chromatography (n-hexanes/EtOAc = 4:1) to give 7 as a colorless syrup (3.1 g, 71%): [α]D25 = −50.0 (c 0.1, MeOH); 1H NMR (CDCl3, 500 MHz): δ 4.79 (m, 1H), 4.58 (dd, J = 1.9, 6.3 Hz, 1H), 4.11 (ddd, J = 2.1, 3.9, 6.2 Hz, 1H), 3.95 (m, 2H), 3.65 (dd, J = 3.7, 11.6 Hz, 1H), 3.58 (dd, J = 6.7, 11.5 Hz, 1H), 1.50 (s, 3H), 1.32 (s, 3H); 13C NMR (125 MHz, CDCl3): δ 112.9, 84.8, 81.8, 81.0, 72.8, 61.7, 26.6, 24.9. Anal. Calcd for C8H14O4: C, 55.16; H, 8.10. Found: C, 55.36; H, 8.30.
General Procedure for the Synthesis of 2a–2h
To a stirred solution of 6-chloropurine or 2,6-dichloropurine (2.0 equiv) and triphenylphosphine (Ph3P) (2.0 equiv) in anhydrous THF (0.15 M) was added diisopropyl azodicarboxylate (DIAD) (4.0 equiv) in anhydrous THF (0.3 M) at 0 °C under a N2 atmosphere, and the mixture was stirred at the same temperature for 15 min. To this solution was added a solution of compound 7 (1.0 equiv) in anhydrous THF (0.3 M) at 0 °C, and the reaction mixture was stirred at room temperature for 24 h. The reaction mixture was concentrated under reduced pressure, and the crude residue was purified by flash silica gel column chromatography to give 8 and 9 combined with triphenylphosphine oxide, respectively. To a stirred solution of 8 or 9 and an appropriate amine hydrochloride salts or free amines (3.0 equiv) in anhydrous THF (0.3 M) was added Et3N (3.0 equiv), and the solution was stirred overnight at room temperature. After the solvent was removed under reduced pressure, the residue was purified by flash silica gel column chromatography to give the triphenylphosphine oxide-contaminated N6-substituted amine intermediates. To a stirred solution of N6-substituted amine intermediates in methanol (0.1 M) was added dropwise 1 N HCl (0.1 equiv) at room temperature. After being stirred at room temperature, at which time TLC indicated the absence of the starting material, the reaction mixture was evaporated under reduced pressure. The residue was purified by flash column chromatography (reversed-phase silica gel, H2O/MeOH, 10:1) to give 2a–2h.
2,6-Dichloro-9-(((3aR,4R,6aS)-2,2-dimethyltetrahydrofuro[3,4-d][1,3]dioxol-4-yl)methyl)-9H-purine (8)
1H NMR (CD3OD, 400 MHz): δ 8.51 (s, 1H), 4.83–4.90 (m, 1H), 4.31–4.39 (m, 3H), 4.06 (dd, J = 3.6, 10.8 Hz, 1H), 3.90 (d, J = 10.8 Hz, 1H), 1.41 (s, 3H), 1.30 (s, 3H).
6-Chloro-9-(((3aR,4R,6aS)-2,2-dimethyltetrahydrofuro[3,4-d][1,3]dioxol-4-yl)methyl)-9H-purine (9)
1H NMR (CDCl3, 400 MHz): δ 8.77 (s, 1H), 8.22 (s, 1H), 4.78–4.81 (m, 1H), 4.55 (dd, J = 2.5, 6.2 Hz, 1H), 4.47 (dd, J = 2.4, 12.8 Hz, 1H), 4.28–4.37 (m, 2H), 3.97–4.05 (m, 2H), 1.50 (s, 3H), 1.33 (s, 3H).
(2R,3S,4S)-2-((2-Chloro-6-((3-fluorobenzyl)amino)-9H-purin-9-yl)methyl)tetrahydrofuran-3,4-diol (2a)
Yield = 46%; white solid; mp 185–186 °C; 1H NMR (CD3OD, 400 MHz): δ 7.93 (s, 1H), 7.20–7.26 (m, 1H), 7.11 (d, J = 7.6 Hz, 1H), 7.03 (d, J = 10.0 Hz, 1H), 6.88 (ddd, J = 1.9, 8.4, 16.9 Hz, 1H), 4.66 (s, 2H), 4.34 (dd, J = 3.5, 14.4 Hz, 1H), 4.19 (dd, J = 6.7, 14.4 Hz, 1H), 3.87–3.97 (m, 3H), 3.71 (dd, J = 4.8, 7.2 Hz, 1H), 3.60 (dd, J = 2.2, 9.2 Hz, 1H); 13C NMR (CD3OD, 100 MHz): δ 165.7, 164.5, 157.1, 156.3, 152.4, 144.1, 143.8, 132.0 (d, J = 8.1 Hz), 125.3, 119.7, 116.2 (d, J = 21.7 Hz), 115.7 (d, J = 21.2 Hz), 81.8, 75.6, 74.8, 73.1, 47.3; [α]D25 = −102.0 (c 0.015, MeOH); ESI-MS m/z: 394.1065 (M + H+). Anal. Calcd for C17H17ClFN5O3: C, 51.85; H, 4.35; N, 17.78. Found: C, 51.75; H, 4.75; N, 17.68.
(2R,3S,4S)-2-((2-Chloro-6-((3-chlorobenzyl)amino)-9H-purin-9-yl)methyl)tetrahydrofuran-3,4-diol (2b)
Yield = 50%; white solid; mp 139–144 °C; 1H NMR (CD3OD, 400 MHz): δ 8.00 (s, 1H), 7.38 (d, J = 8.3 Hz, 1H), 7.22–7.31 (m, 3H), 4.72 (s, 2H), 4.42 (dd, J = 3.4, 14.4 Hz, 1H), 4.27 (dd, J = 6.7, 14.4 Hz, 1H), 3.94–4.05 (m, 3H), 3.79 (dd, J = 4.2, 7.6 Hz, 1H), 3.68 (dd, J = 2.2, 9.3 Hz, 1H); 13C NMR (CD3OD, 100 MHz): δ 157.1, 156.3, 152.4, 144.1, 143.5, 138.7, 138.2, 132.1, 129.0, 119.7, 95.7, 81.7, 75.6, 74.8, 73.1, 47.3, 45.2; [α]D25 = +30.0 (c 0.03, MeOH); FAB-MS m/z: 410.0729 (M + H+). Anal. Calcd for C17H17Cl2N5O3: C, 49.77; H, 4.18; N, 17.07. Found: C, 49.97; H, 4.38; N, 17.37.
(2R,3S,4S)-2-((6-((3-Bromobenzyl)amino)-2-chloro-9H-purin-9-yl)methyl)tetrahydrofuran-3,4-diol (2c)
Yield = 46%; white solid; mp 130–132 °C; 1H NMR (CD3OD, 800 MHz): δ 8.01 (s, 1H), 7.55 (s, 1H), 7.36 (dd, J = 7.9, 25.9 Hz, 2H), 7.21 (t, J = 7.8 Hz, 1H), 4.71 (br s, 2H), 4.42 (dd, J = 3.5, 14.4 Hz, 1H), 4.27 (dd, J = 6.8, 14.4 Hz, 1H), 4.03 (ddd, J = 3.4, 6.9, 10.4 Hz, 1H), 3.97 (dd, J = 4.5, 9.6 Hz, 1H), 3.80 (dd, J = 5.0, 7.2 Hz, 1H), 3.69 (dd, J = 2.8, 9.6 Hz, 1H); 13C NMR (CD3OD, 200 MHz): δ 157.0, 156.3, 152.4, 144.1, 143.5, 142.7, 132.5, 132.1, 128.4, 124.1, 119.6, 81.7, 75.6, 74.8, 73.1, 47.3, 45.2; [α]D25 = +147.0 (c 0.015, MeOH); FAB-MS m/z: 454.0287 (M + H+). Anal. Calcd for C17H17BrClN5O3: C, 44.90; H, 3.77; N, 15.40. Found: C, 44.90; H, 3.87; N, 15.60.
(2R,3S,4S)-2-((2-Chloro-6-((3-iodobenzyl)amino)-9H-purin-9-yl)methyl)tetrahydrofuran-3,4-diol (2d)
Yield = 60%; white solid; mp 146–148 °C; 1H NMR (CD3OD, 400 MHz): δ 8.00 (s, 1H), 7.76 (s, 1H), 7.58 (d, J = 7.2 Hz, 1H), 7.37 (d, J = 8.0 Hz, 1H), 7.07 (t, J = 8.4 Hz, 1H), 4.68 (br s, 2H), 4.41 (dd, J = 3.6, 14.4 Hz, 1H), 4.27 (dd, J = 7.2, 14.8 Hz, 1H), 3.94–4.03 (m, 3H), 3.78 (dd, J = 5.2, 7.2 Hz, 1H), 3.68 (dd, J = 2.4, 9.2 Hz, 1H); 13C NMR (CD3OD, 100 MHz): δ 163.8, 157.1, 144.2, 143.5, 138.7, 138.2, 132.1, 130.3, 129.1, 129.0, 119.7, 108.8, 81.8, 75.6, 74.8, 73.1, 47.3; [α]D25 = −90.0 (c 0.01, MeOH); FAB-MS m/z: 502.0151 (M + H+). Anal. Calcd for C17H17ClIN5O3: C, 40.70; H, 3.42; N, 13.96. Found: C, 40.90; H, 3.62; N, 13.96.
(2R,3S,4S)-2-((6-((3-Fluorobenzyl)amino)-9H-purin-9-yl)methyl)tetrahydrofuran-3,4-diol (2e)
Yield = 66%; white solid; mp 140–141 °C; 1H NMR (CD3OD, 400 MHz): δ 8.29 (s, 1H), 8.10 (s, 1H), 7.31–7.37 (m, 1H), 7.22 (d, J = 7.7 Hz, 1H), 7.14 (d, J = 10.0 Hz, 1H), 6.99 (ddd, J = 2.2, 8.6, 16.9 Hz, 1H), 4.85 (s, 2H), 4.51 (dd, J = 3.5, 14.5 Hz, 1H), 4.38 (dd, J = 6.5, 14.4 Hz, 1H), 4.09 (ddd, J = 3.5, 6.9, 13.7 Hz, 1H), 3.98–4.04 (m, 2H), 3.82 (dd, J = 4.8, 7.2 Hz, 1H), 3.73 (dd, J = 2.2, 9.2 Hz, 1H); 13C NMR (CD3OD, 100 MHz): δ 156.2, 153.9, 143.6, 143.3, 135.2, 131.4, 131.3, 124.6, 115.3, 115.1, 115.0, 114.8, 81.2, 74.9, 74.2, 72.4, 46.5; [α]D25 = +125.7 (c 0.02, MeOH); ESI-MS m/z: 360.1461 (M + H+). Anal. Calcd for C17H18FN5O3: C, 56.82; H, 5.05; N, 19.49. Found: C, 56.92; H, 5.15; N, 19.59.
(2R,3S,4S)-2-((6-((3-Chlorobenzyl)amino)-9H-purin-9-yl)methyl)tetrahydrofuran-3,4-diol (2f)
Yield = 69%; white solid; mp 150–153 °C; 1H NMR (CD3OD, 400 MHz): δ 8.25 (s, 1H), 8.06 (s, 1H), 7.37 (s, 1H), 7.20–7.30 (m, 3H), 4.79 (s, 2H), 4.47 (dd, J = 3.5, 14.4 Hz, 1H), 4.33 (dd, J = 6.5, 14.4 Hz, 1H), 4.05 (ddd, J = 3.5, 6.9, 13.8 Hz, 1H), 3.93–4.00 (m, 2H), 3.78 (dd, J = 4.8, 7.2 Hz, 1H), 3.68 (dd, J = 2.3, 9.3 Hz, 1H); 13C NMR (CD3OD, 100 MHz): δ 156.7, 154.6, 151.1, 143.9, 138.2, 135.2, 131.3, 130.9, 130.5, 128.9, 120.8, 108.8, 81.8, 75.6, 74.8, 73.1, 47.2; [α]D25 = +138.2 (c 0.02, MeOH); ESI-MS m/z: 376.1182 (M + H+). Anal. Calcd for C17H18ClN5O3: C, 54.33; H, 4.83; N, 18.64. Found: C, 54.53; H, 4.93; N, 18.84.
(2R,3S,4S)-2-((6-((3-Bromobenzyl)amino)-9H-purin-9-yl)methyl)tetrahydrofuran-3,4-diol (2g)
Yield = 63%; white solid; mp 148–151 °C; 1H NMR (CD3OD, 500 MHz): δ 8.25 (s, 1H), 8.07 (s, 1H), 7.53 (s, 1H), 7.35 (dd, J = 7.8, 16.8 Hz, 2H), 7.20 (t, J = 7.8 Hz, 1H), 4.78 (br s, 2H), 4.47 (dd, J = 3.4, 14.4 Hz, 1H), 4.33 (dd, J = 6.6, 14.4 Hz, 1H), 4.05 (ddd, J = 3.4, 6.9, 10.4 Hz, 1H), 3.98–4.02 (m, 1H), 3.94–3.99 (m, 1H), 3.79 (dd, J = 5.0, 7.2 Hz, 1H), 3.69 (dd, J = 2.5, 9.6 Hz, 1H), 3.29–3.30 (m, 1H); 13C NMR (CD3OD, 125 MHz): δ 156.1, 153.9, 143.39, 143.33, 131.5 (d, J = 11.4 Hz), 131.3, 127.4, 123.5, 120.1, 108.5, 81.2, 74.9, 74.2, 72.4, 46.5; [α]D25 = +166.8 (c 0.02, MeOH); ESI-MS m/z: 422.0642 (M + H+). Anal. Calcd for C17H18BrN5O3: C, 48.58; H, 4.32; N, 16.66. Found: C, 48.78; H, 4.52; N, 16.86.
(2R,3S,4S)-2-((6-((3-Iodobenzyl)amino)-9H-purin-9-yl)methyl)tetrahydrofuran-3,4-diol (2h)
Yield = 51%; white solid; mp 177–179 °C; 1H NMR (DMSO-d6, 800 MHz): δ 8.35 (br s, 1H), 8.20 (br s, 1H), 8.07 (s, 1H), 7.72 (s, 1H), 7.57 (d, J = 7.8 Hz, 1H), 7.35 (d, J = 7.6 Hz, 1H), 7.10 (t, J = 7.7 Hz, 1H), 4.96 (d, J = 6.2 Hz, 1H), 4.83 (d, J = 4.6 Hz, 1H), 4.64 (br s, 2H), 4.34 (dd, J = 3.8, 14.2 Hz, 1H), 4.20 (dd, J = 7.3, 14.2 Hz, 1H), 3.95 (ddd, J = 3.9, 6.9, 10.7 Hz, 1H), 3.88–3.92 (m, 1H), 3.86 (dd, J = 4.8, 9.2 Hz, 1H), 3.71 (dd, J = 6.4, 11.5 Hz, 1H), 3.50 (dd, J = 3.3, 9.2 Hz, 1H), 3.29 (br s, 1H); 13C NMR (DMSO-d6, 200 MHz): δ 154.1, 152.2, 149.0, 142.9, 141.3, 135.7, 135.2, 130.4, 126.6, 94.6, 79.6, 73.2, 72.4, 70.2, 64.8, 45.2; [α]D25 = +138.8 (c 0.0125, MeOH); FAB-MS m/z: 468.0529 (M + H+). Anal. Calcd for C17H18IN5O3: C, 43.70; H, 3.88; N, 14.99. Found: C, 43.90; H, 3.98; 14.99.
2-Chloroquinolin-6-ol (10)
To a stirred suspension of quinoline-2,6-diol (1.0 g, 6.2 mmol) in acetonitrile (20.7 mL, 0.3 M) was added dropwise phosphorus oxychloride (0.9 mL, 1.5 equiv) at room temperature, and the reaction mixture was stirred at 80 °C for 23 h. The reaction mixture was cooled and neutralized with solid NaHCO3, filtered, and evaporated under reduced pressure to give a colorless syrup. The residue was purified by silica gel column chromatography (n-hexanes/EtOAc = 6:1) to give 10 as a white solid (723.6 mg, 65%): 1H NMR (CDCl3, 400 MHz): δ 7.95 (dd, J = 11.8, 8.9 Hz, 2H), 7.34 (dd, J = 8.8, 2.2 Hz, 2H), 7.13 (d, J = 2.8 Hz, 1H), 5.36 (s, 1H).
General Procedure for the Synthesis of 11a–11e
To a stirred solution of 10 (1.0 equiv) and K2CO3 (1.5 equiv) in DMF (0.3 M) was added 3-halobenzyl chloride or benzyl chloride (1.5 equiv) at room temperature, and the reaction mixture was stirred at 80 °C for 7 h. The reaction mixture was cooled and quenched with saturated ammonium chloride solution. The organic layer was washed with brine, dried with anhydrous MgSO4, and evaporated. The residue was purified by silica gel column chromatography (n-hexanes/EtOAc = 20:1) to give 11a–11e.
2-Chloro-6-((3-fluorobenzyl)oxy)quinoline (11a)
Yield = 92%; white solid; mp 99–100 °C; 1H NMR (CDCl3, 400 MHz): δ 7.97 (dd, J = 13.5, 8.9 Hz, 2H), 7.47 (dd, J = 9.2, 2.7 Hz, 1H), 7.31–7.41 (m, 2H), 7.17–7.25 (m, 2H), 7.13 (d, J = 2.6 Hz, 1H), 7.05 (t, J = 7.3 Hz, 1H), 5.18 (s, 2H); 13C NMR (CD3OD, 100 MHz): δ 156.88, 148.37, 143.96, 138.82 (d, J = 7.2 Hz), 137.74, 130.33 (d, J = 8.2 Hz), 130.20, 127.83, 123.26, 122.80, 122.66, 115.16 (d, J = 21.2 Hz), 114.31 (d, J = 22.1 Hz), 106.71, 69.54; HRMS (FD+) m/z: [M+] calcd for C16H11ClFNO, 287.0508; found, 287.0507.
2-Chloro-6-((3-chlorobenzyl)oxy)quinoline (11b)
Yield = 98%; white solid; mp 105–106 °C; 1H NMR (CDCl3, 400 MHz): δ 7.96 (dd, J = 14.1, 8.9 Hz, 2H), 7.46 (dd, J = 9.4, 3.0 Hz, 2H), 7.35 (d, J = 4.5 Hz, 4H), 7.12 (d, J = 2.7 Hz, 1H), 5.15 (s, 2H); 13C NMR (CDCl3, 100 MHz): δ 156.88, 148.39, 143.98, 138.32, 137.72, 134.69, 130.12 (d, J = 19.0 Hz), 128.40, 127.82, 127.48, 125.40, 123.22, 122.65, 106.73, 69.51; HRMS (FD+) m/z: [M+] calcd for C16H11Cl2NO, 303.0212; found, 303.0213.
2-Chloro-6-((3-bromobenzyl)oxy)quinoline (11c)
Yield = 82%; white solid; mp 123–124 °C; 1H NMR (CDCl3, 400 MHz): δ 7.92 (dd, J = 13.9, 8.9 Hz, 2H), 7.60 (s, 1H), 7.43 (s, 2H), 7.35 (d, J = 7.7 Hz, 1H), 7.30 (d, J = 8.6 Hz, 1H), 7.21–7.27 (m, 1H), 7.08 (d, J = 2.7 Hz, 1H), 5.10 (s, 2H); 13C NMR (CDCl3, 100 MHz): δ 156.87, 148.39, 143.98, 138.57, 137.72, 131.34, 130.40, 130.26 (d, J = 8.8 Hz), 127.82, 125.89, 123.22, 122.74 (d, J = 17.9 Hz), 106.73, 69.44; HRMS (FD+) m/z: [M+] calcd for C16H11BrClNO, 346.9707; found, 346.9712.
2-Chloro-6-((3-iodobenzyl)oxy)quinoline (11d)
Yield = 81%; white solid; mp 128–129 °C; 1H NMR (CDCl3, 400 MHz): δ 7.97 (dd, J = 18.2, 8.9 Hz, 2H), 7.84 (s, 1H), 7.70 (d, J = 7.9 Hz, 1H), 7.40–7.51(m, 2H), 7.35 (d, J = 8.6 Hz, 1H), 7.14 (dd, J = 13.5, 5.4 Hz, 2H), 5.12 (s, 2H); 13C NMR (CDCl3, 100 MHz): δ 156.88, 148.38, 143.97, 138.59, 137.72, 137.31, 136.33, 130.32 (d, J = 22.6 Hz), 127.82, 126.58, 123.22, 122.65, 106.72, 94.55, 69.33; HRMS (FD+) m/z: [M+] calcd for C16H11ClINO, 394.9568; found, 394.9577.
6-(Benzyloxy)-2-chloroquinoline (11e)
Yield = 93%; white solid; 1H NMR (CD3OD, 400 MHz): δ 7.97 (dd, J = 21.6, 8.9 Hz, 2H), 7.46 (ddd, J = 19.2, 10.5, 5.3 Hz, 5H), 7.33–7.39 (m, 2H), 7.16 (d, J = 2.7 Hz, 1H), 5.19 (s, 2H).
General Procedure for the Synthesis of 3a–3e
To a stirred solution of 7 (2.0 equiv) in THF (0.2 M) was added t-BuOK (3.0 equiv), followed by compounds 11a–11e (1.0 equiv) at room temperature, and the mixture was stirred at 80 °C for 2 h. The reaction mixture was cooled and quenched with saturated ammonium chloride solution. The organic layer was washed with brine, dried with anhydrous MgSO4, and evaporated to give crude compounds. To the solution of crude intermediates in methanol (0.1 M) was added dropwise 1 N HCl (1 equiv) at room temperature. After being stirred at 60 °C for 14 h, the reaction mixture was evaporated under reduced pressure. The residue was purified by silica gel column chromatography (dichloromethane/MeOH = 50:1) to give 3a–3e.
(2R,3S,4S)-2-(((6-((3-Fluorobenzyl)oxy)quinolin-2-yl)oxy)methyl)tetrahydrofuran-3,4-diol (3a)
Yield = 52%; white solid; mp 118–119 °C; 1H NMR (CD3OD, 400 MHz): δ 8.06 (d, J = 8.9 Hz, 1H), 7.76 (d, J = 9.1 Hz, 1H), 7.36–7.48 (m, 2H), 7.22–7.35 (m, 3H), 7.07 (td, J = 8.5, 2.3 Hz, 1H), 6.96 (d, J = 8.8 Hz, 1H), 5.22 (s, 2H), 4.65 (dd, J = 11.6, 2.6 Hz, 1H), 4.47 (dd, J = 11.6, 5.3 Hz, 1H), 4.21–4.30 (m, 1H), 4.07–4.19 (m, 3H), 3.80 (dd, J = 9.6, 3.2 Hz, 1H); 13C NMR (CD3OD, 150 MHz): δ 165.36, 163.74, 162.37, 156.73, 143.29, 141.63 (d, J = 7.4 Hz), 139.76, 131.48 (d, J = 8.2 Hz), 129.46, 127.39, 124.27, 122.75, 115.67 (d, J = 21.4 Hz), 115.24 (d, J = 22.3 Hz), 114.21, 109.19, 81.88, 74.16 (d, J = 5.6 Hz), 72.52, 70.56, 67.51; [α]D25 = +412.0 (c 0.01, MeOH); HRMS (FD+) m/z: [M+] calcd for C21H20FNO5, 385.1320; found, 385.1323.
(2R,3S,4S)-2-(((6-((3-Chlorobenzyl)oxy)quinolin-2-yl)oxy)methyl)tetrahydrofuran-3,4-diol (3b)
Yield = 56%; white solid; mp 103–104 °C; 1H NMR (CD3OD, 400 MHz): δ 8.07 (d, J = 8.9 Hz, 1H), 7.76 (d, J = 9.1 Hz, 1H), 7.54 (s, 1H), 7.25–7.49 (m, 5H), 6.97 (d, J = 8.8 Hz, 1H), 5.20 (s, 2H), 4.65 (dd, J = 11.6, 2.5 Hz, 1H), 4.47 (dd, J = 11.6, 5.2 Hz, 1H), 4.20–4.29 (m, 1H), 4.07–4.19 (m, 3H), 3.81 (dd, J = 9.6, 3.1 Hz, 1H); 13C NMR (CD3OD, 150 MHz): δ 162.38, 156.71, 143.31, 141.14, 139.77, 135.60, 131.25, 129.48, 129.09, 128.57, 127.39, 126.93, 122.74, 114.22, 109.20, 81.89, 74.17 (d, J = 5.5 Hz), 72.52, 70.52, 67.51; [α]D25 = +212.3 (c 0.02, MeOH); HRMS (FD+) m/z: [M+] calcd for C21H20ClNO5, 401.1025; found, 401.1025.
(2R,3S,4S)-2-(((6-((3-Bromobenzyl)oxy)quinolin-2-yl)oxy)methyl)tetrahydrofuran-3,4-diol (3c)
Yield = 49%; white solid; mp 170–171 °C; 1H NMR (DMSO, 400 MHz): δ 8.14 (d, J = 8.9 Hz, 1H), 7.69 (d, J = 9.2 Hz, 2H), 7.48–7.57 (m, 2H), 7.34–7.45 (m, 3H), 6.99 (d, J = 8.8 Hz, 1H), 5.21 (s, 2H), 4.98 (d, J = 6.1 Hz, 1H), 4.85 (d, J = 4.4 Hz, 1H), 4.52 (d, J = 2.8 Hz, 1H), 4.32 (s, 1H), 4.03–4.09 (m, 1H), 3.95 (dd, J = 8.1, 4.0 Hz, 2H), 3.89 (dd, J = 11.9, 6.1 Hz, 1H), 3.57 (dd, J = 9.3, 3.3 Hz, 1H); 13C NMR (DMSO, 100 MHz): δ 160.79, 154.95, 141.70, 140.21, 138.97, 131.20 (d, J = 3.9 Hz), 130.82, 128.58, 127.22, 125.95, 122.02 (d, J = 36.6 Hz), 113.64, 108.68, 80.12, 72.89 (d, J = 18.9 Hz), 70.72, 69.02, 66.82; [α]D25 = +172.0 (c 0.025, MeOH); HRMS (FD+) m/z: [M+] calcd for C21H20BrNO5, 445.0519; found, 445.0516.
(2R,3S,4S)-2-(((6-((3-Iodobenzyl)oxy)quinolin-2-yl)oxy)methyl)tetrahydrofuran-3,4-diol (3d)
Yield = 68%; white solid; mp 124–125 °C; 1H NMR (CD3OD, 400 MHz): δ 8.11 (d, J = 8.9 Hz, 1H), 7.85 (s, 1H), 7.67 (t, J = 8.3 Hz, 2H), 7.49 (d, J = 7.5 Hz, 1H), 7.40 (d, J = 2.6 Hz, 1H), 7.36 (dd, J = 9.0, 2.8 Hz, 1H), 7.19 (t, J = 7.8 Hz, 1H), 6.97 (d, J = 8.8 Hz, 1H), 5.14 (s, 2H), 4.99 (d, J = 6.3 Hz, 1H), 4.86 (d, J = 4.5 Hz, 1H), 4.50 (dd, J = 11.6, 2.6 Hz, 1H), 4.28 (dd, J = 11.6, 6.4 Hz, 1H), 4.00–4.08(m, 1H), 3.80–3.96(m, 3H), 3.54 (dd, J = 9.3, 3.2 Hz, 1H); 13C NMR (CD3OD, 100 MHz): δ 165.54, 159.74, 146.44, 144.80, 143.74, 141.82, 141.36, 135.90, 133.31, 132.35, 130.69, 126.58, 118.38, 113.47, 100.08, 84.91, 77.64 (d, J = 18.8 Hz), 75.46, 73.74, 71.55; [α]D25 = +438.7 (c 0.01, MeOH); HRMS (FD+) m/z: [M+] calcd for C21H20INO5, 493.0381; found, 493.0380.
(2R,3S,4S)-2-(((6-(Benzyloxy)quinolin-2-yl)oxy)methyl)tetrahydrofuran-3,4-diol (3e)
Yield = 79%; white solid; mp 139–140 °C; 1H NMR (CD3OD, 400 MHz): δ 8.05 (d, J = 8.9 Hz, 1H), 7.75 (d, J = 9.1 Hz, 1H), 7.51 (d, J = 7.3 Hz, 2H), 7.27–7.46 (m, 5H), 6.96 (d, J = 8.9 Hz, 1H), 5.20 (s, 2H), 4.65 (dd, J = 11.6, 2.5 Hz, 1H), 4.46 (dd, J = 11.6, 5.2 Hz, 1H), 4.25 (dd, J = 7.7, 4.4 Hz, 1H), 4.08–4.22 (m, 3H), 3.81 (dd, J = 9.6, 3.2 Hz, 1H); 13C NMR (CD3OD, 150 MHz): δ 162.30, 156.99, 143.20, 139.75, 138.69, 129.67, 129.36, 129.09, 128.81, 127.41, 122.85, 114.14, 109.13, 81.89, 74.16 (d, J = 5.4 Hz), 72.52, 71.48, 67.49; [α]D25 = +388.0 (c 0.01, MeOH); HRMS (FD+) m/z: [M+] calcd for C21H21NO5, 367.1414; found, 367.1424.
Biology (In Vitro Anti-inflammation Test)
Statistical Analysis
The data were presented as the mean ± standard error of the mean (SEM) of three independent readings. Statistical differences were analyzed using one-way analysis of variance (ANOVA), followed by Tukey’s multiple comparison analysis, using GraphPad Prism 8 (GraphPad Software, San Diego, CA, USA). The statistical significance was set at P < 0.05.
Cell Culture
The mouse macrophage cell line RAW 264.7 (ATCC, Manassas, VA, USA) was cultured in DMEM containing 10% FBS (HyClone; Logan, UT, USA) and 1% penicillin/streptomycin. Cells were incubated at 37 °C in an incubator with 5% CO2. To confirm cell viability, RAW 264.7 cells at 50% confluency were treated with various concentrations of the compounds for 24 h. Then, the cells were treated with the 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl-tetrazolium-bromide (MTT) assay reagent (Sigma-Aldrich, St. Louis, MO, USA) at a final concentration of 0.5 mg/mL for 2 h until purple crystals formed. Then, DMSO was added for 10 min to dissolve the crystals, and the absorbance was measured at 540 nm.
Gene Expression Analysis
Total RNA from RAW 264.7 cells was extracted using TRI Reagent (MRC, Cincinnati, OH, USA). cDNA was synthesized using TOPscriptTM RT DryMIX (Enzynomics; Daejeon, South Korea). mRNA levels were measured by real-time PCR using a Rotor-Gene Q (QIAGEN; Hilden, Germany) in a 10 μL reaction volume consisting of cDNA transcripts, primer pairs, and the TOPreal SYBR Green PCR Kit (Enzynomics). Gene expression levels were normalized to the 18S rRNA levels. Primer pairs for IL-6, IL-1β, and TNFα were used, and their forward and reverse sequences are as follows. IL-1β forward: 5′-TGCCACCTTTTGACAGTGATG-3′; IL-1β reverse: 5′-TTCTTGTGACCCTGAGCGAC-3′, TNFα forward: 5′-CCCTCACACTCAGATCATCTTCT-3′; TNFα reverse: 5′-GCTACGACGTGGGCTACAG-3′, IL-6 forward: 5′-AGTTGCCTTCTTGGGACTGA-3′; IL-6 reverse: 5′-TCCACGATTTCCCAGAGAAC-3′; 18S forward; 5′-CGAAAGCATTTGCCAAGAAT-3′; 18S reverse: 5′-AGTCGGCATCGTTTATGGTC-3′.
Enzyme-Linked Immunosorbent Assay
RAW 264.7 cells were pretreated for 2 h with active compounds, followed by treatment with 100 ng/mL LPS for 24 h (Sigma-Aldrich). IL-1β levels were then determined in the supernatants using the mouse IL-1 beta Quantitative ELISA Kit (R&D Systems, Minneapolis, MN, USA) according to the manufacturer’s instructions.
Western Blotting
RAW 264.7 cells were lysed with RIPA buffer (Thermo Fisher Scientific; Rockford, IL, USA), and the BCA kit (Thermo Fisher Scientific) was used for protein concentration quantification. 30 μg of protein samples was separated by SDS-PAGE and then transferred to PVDF membranes (Cytiva, Amersham, Germany), which were incubated overnight with primary antibodies (4 °C). After the membranes were washed, secondary antibodies were added, and the membranes were incubated at room temperature for 2 h. Finally, proteins were visualized with a LAS-4000 (Fuji Photo Film, Tokyo, Japan). Mouse antirabbit IgG-HRP (#sc-2357, 1:2000) was purchased from Santa Cruz Biotechnology, Inc. (Dallas, TX, USA), while phospho NF-κB (#3033, 1:2000) and total NF-κB (#8242, 1:2000) antibodies were purchased from Cell Signaling Technology (Danvers, MA, USA).
Acknowledgments
This study was financially supported by the National Research Foundation (NRF) grants (NRF-2022R1A2C1002956 and NRF-2022R1I1A3056585). The authors are grateful to the center for research facilities at the Chonnam National University and Korea Basic Science Institute for their assistance in the analysis of the organic structures (FT-NMR and HRMS).
Supporting Information Available
The Supporting Information is available free of charge at https://pubs.acs.org/doi/10.1021/acsomega.3c05029.
Copies of 1H and 13C NMR spectra (PDF)
Author Contributions
† M.N. and M.A.A. contributed equally to this work.
The authors declare no competing financial interest.
Supplementary Material
References
- Turner M. D.; Nedjai B.; Hurst T.; Pennington D. J. Cytokines and chemokines: At the crossroads of cell signalling and inflammatory disease. Biochim. Biophys. Acta Mol. Cell Res. 2014, 1843, 2563–2582. 10.1016/j.bbamcr.2014.05.014. [DOI] [PubMed] [Google Scholar]
- Kany S.; Vollrath J. T.; Relja B. Cytokines in inflammatory disease. Int. J. Mol. Sci. 2019, 20, 6008–6038. 10.3390/ijms20236008. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kang M. J.; Jo S. G.; Kim D. J.; Park J. H. NLRP 3 inflammasome mediates interleukin-1β production in immune cells in response to Acinetobacter baumannii and contributes to pulmonary inflammation in mice. Immunology 2017, 150, 495–505. 10.1111/imm.12704. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Marnett L. J. Inflammation and cancer: chemical approaches to mechanisms, imaging, and treatment. J. Org. Chem. 2012, 77, 5224–5238. 10.1021/jo300214d. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Stevens R. J.; Douglas K. M.; Saratzis A. N.; Kitas G. D. Inflammation and atherosclerosis in rheumatoid arthritis. Expet Rev. Mol. Med. 2005, 7, 1–24. 10.1017/S1462399405009154. [DOI] [PubMed] [Google Scholar]
- Donath M. Y.; Shoelson S. E. Type 2 diabetes as an inflammatory disease. Nat. Rev. Immunol. 2011, 11, 98–107. 10.1038/nri2925. [DOI] [PubMed] [Google Scholar]
- Hoozemans J. J.; O’Banion M. K. The role of COX-1 and COX-2 in Alzheimer’s disease pathology and the therapeutic potentials of non-steroidal anti-inflammatory drugs. Curr. Drug Targets: CNS Neurol. Disord. 2005, 4, 307–315. 10.2174/1568007054038201. [DOI] [PubMed] [Google Scholar]
- Liu T.; Zhang L.; Joo D.; Sun S.-C. NF-κB signaling in inflammation. Signal Transduct. Targeted Ther. 2017, 2, 17023. 10.1038/sigtrans.2017.23. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Luo J.-L.; Kamata H.; Karin M. IKK/NF-κB signaling: balancing life and death-a new approach to cancer therapy. J. Clin. Invest. 2005, 115 (10), 2625–2632. 10.1172/JCI26322. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Yu H.; Lin L.; Zhang Z.; Zhang H.; Hu H. Targeting NF-κB pathway for the therapy of diseases: mechanism and clinical study. Signal Transduct. Targeted Ther. 2020, 5, 209–231. 10.1038/s41392-020-00312-6. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Leonard N. J.; Morrice A. G.; Sprecker M. A. Linear benzoadenine. Stretched-out analog of adenine. J. Org. Chem. 1975, 40, 356–363. 10.1021/jo00891a021. [DOI] [PubMed] [Google Scholar]
- Seley-Radtke K. L.; Yates M. K. The evolution of nucleoside analogue antivirals: A review for chemists and non-chemists. Part 1: Early structural modifications to the nucleoside scaffold. Antiviral Res. 2018, 154, 66–86. 10.1016/j.antiviral.2018.04.004. [DOI] [PMC free article] [PubMed] [Google Scholar]
- An S.; Kim G.; Kim H. J.; Ahn S.; Kim H. Y.; Ko H.; Hyun Y. E.; Nguyen M.; Jeong J.; Liu Z.; Han J.; Choi H.; Yu J.; Kim J. W.; Lee H. W.; Jacobson K. A.; Cho W. J.; Kim Y.; Kang K. W.; Noh M.; Jeong L. S. Discovery and Structure–Activity Relationships of Novel Template, Truncated 1′-Homologated Adenosine Derivatives as Pure Dual PPARγ/δ Modulators. J. Med. Chem. 2020, 63, 16012–16027. 10.1021/acs.jmedchem.0c01874. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Nguyen M.; An S.; Nguyen Y.; Hyun Y. E.; Choi H.; Pham L.; Kim J. A.; Noh M.; Kim G.; Jeong L. S. Design, synthesis, and biological activity of l-1’-homologated adenosine derivatives. ACS Med. Chem. Lett. 2022, 13, 1131–1136. 10.1021/acsmedchemlett.2c00159. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hyun Y. E.; An S.; Kim M.; Park I. G.; Yoon S.; Javaid H. M. A.; Vu T. N. L.; Kim G.; Choi H.; Lee H. W.; Noh M.; Huh J. Y.; Choi S.; Kim H.; Jeong L. S. Structure–Activity Relationships of Truncated 1′-Homologated Carbaadenosine Derivatives as New PPARγ/δ Ligands: A Study on Sugar Puckering Affecting Binding to PPARs. J. Med. Chem. 2023, 66, 4961–4978. 10.1021/acs.jmedchem.2c02071. [DOI] [PubMed] [Google Scholar]
- Bennis K.; Calinaud P.; Gelas J.; Ghobsi M. A new route to some enantiomerically pure substituted morpholines from D-ribono-and D-gulono-1, 4-lactones. Carbohydr. Res. 1994, 264, 33–44. 10.1016/0008-6215(94)00190-1. [DOI] [Google Scholar]
- Köster H.; Sinha N. Dialkyl aluminium chloride: a reagent for removal of trityl group from trityl ethers of deoxynucleosides, deoxynucleotides, and oligodeoxynucleotides. Tetrahedron Lett. 1982, 23, 2641–2644. 10.1016/S0040-4039(00)87418-3. [DOI] [Google Scholar]
- Mitsunobu O.; Yamada M. Preparation of esters of carboxylic and phosphoric acid via quaternary phosphonium salts. Bull. Chem. Soc. Jpn. 1967, 40, 2380–2382. 10.1246/bcsj.40.2380. [DOI] [Google Scholar]
- Daynes R. A.; Jones D. C. Emerging roles of PPARs in inflammation and immunity. Nat. Rev. Immunol. 2002, 2, 748–759. 10.1038/nri912. [DOI] [PubMed] [Google Scholar]
- Keiser M. J.; Setola V.; Irwin J. J.; Laggner C.; Abbas A. l.; Hufeisen S. J.; Jensen N. H.; Kuijer M. B.; Matos R. C.; Tran T. B.; Whaley R.; Glennon R. A.; Hert J.; Thomas K. L. H.; Edwards D. D.; Shoichet B. K.; Roth B. L. Predicting new molecular targets for known drugs. Nature 2009, 462, 175–181. 10.1038/nature08506. [DOI] [PMC free article] [PubMed] [Google Scholar]
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