Key resources table

REAGENT or RESOURCE	SOURCES	IDENTIFIER
Biological Samples
Whole blood samples		N/A
Critical Commercial Sequencing platform
HiSeq X Ten	Illumina
Deposited Data
Whole genome sequencing data	dbGaP
Software and Algorithms
Plink	112	https://www.cog-genomics.org/plink/2.0/
Annovar	113	https://annovar.openbioinformatics.org/en/latest/
Eigensoft	114,115	https://github.com/DReichLab/EIG
Figtree		http://tree.bio.ed.ac.uk/software/figtree/
ADMIXTOOLS2		https://uqrmaie1.github.io/admixtools/index.html
BWA	116	https://github.com/lh3/bwa
GATK	117	https://gatk.broadinstitute.org/
ADMIXTURE	118	http://software.genetics.ucla.edu/admixture/
trimadap		https://github.com/lh3/trimadap
SAMBLASTER	119	https://github.com/GregoryFaust/samblaster
Delly	120	https://github.com/dellytools/delly
CLUMPP	121	https://web.stanford.edu/group/rosenberglab/clumpp.html
MEGA	122	https://www.megasoftware.net/
PSMC	109	https://github.com/lh3/psmc
MSMC	123	https://github.com/stschiff/msmc
SMC++	110	https://github.com/popgenmethods/smcpp
GREAT	111	http://great.stanford.edu/public/html/
momi	107,108	https://github.com/popgenmethods/momi
qpgraph	106	https://uqrmaie1.github.io/admixtools/articles/admixtools.html
cTools	105	https://github.com/DReichLab/cTools
DATES	124	https://github.com/priyamoorjani/DATES
TreeMix	125	https://bitbucket.org/nygcresearch/treemix/wiki/Home
SHAPEIT4	126	https://odelaneau.github.io/shapeit4/
Selscan	127	https://github.com/szpiech/selscan
DAVID	128	https://david.ncifcrf.gov/tools.jsp
VCFtools	129	https://vcftools.github.io/man_latest.html