Skip to main content
. Author manuscript; available in PMC: 2024 Oct 18.
Published in final edited form as: Neuron. 2023 Aug 4;111(20):3176–3194.e7. doi: 10.1016/j.neuron.2023.07.005

KEY RESOURCES TABLE

REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies
Mouse monoclonal anti Syt1 Synaptic Systems Cat# 105-011C2: RRID:AB_2619760
Chicken polyclonal anti MAP2 Encor CPCA-MAP2, RRID:AB_2138173
Rabbit polyclonal anti Syn1 Sudhof Lab Clone YZ6078, RRID: AB_2861225
Mouse monoclonal anti PSD95 Thermo Cat# MA146: RRID:AB_2092361
Rabbit polyclonal anti APP Ho et al., 2008 Clone U955
Mouse monoclonal anti APP Sigma Cat# MABN380: RRID: AB_2714163
Rabbit polyclonal anti CASK Neuromab Cat# O14936: RRID: AB_2877188
Rabbit polyclonal anti Fe65 Cao and Südhof, 2001 Clone 4194
Rabbit polyclonal anti Mint1 Ho et al., 2008 Clone P730
Rabbit polyclonal anti Nlgn1 Jahn Monoclonals Clone 4C12
Rabbit polyclonal anti pan-Nrxn Sclip and Südhof, 2020 Clone G394, RRID: AB_2800397
Rabbit polyclonal anti RIM1/2 Acuna et al., 2015 Clone U952
Rabbit polyclonal anti Stx1 a/b Zhou et al., 2012 Clone 438B
Rabbit polyclonal anti PSD95 Patzke et al., 2019 Clone L667: RRID:AB_2800396
Mouse monoclonal anti L1CAM Sigma Cat# L4543: RRID:AB_609903
Rabbit monoclonal anti APP Abcam Cat# Ab32136: RRID: AB_2289606
Chemicals, Peptides, and Recombinant Proteins
Accutase Innovative Cell Cat# AT104
Gem21 Neuroplex supplement Gemini Bio Cat# 400–160
BDNF PeproTech Cat# 450–02
Doxycycline Sigma-Aldrich Cat# D9891
DMEM media Thermo Fisher Cat# 11965092
DMEM/F-12 media Thermo Fisher Cat# 11320082
HyClone fetal bovine serum (FBS) GE Healthcare Cat# SH30071.03
MEM media Thermo Fisher Cat# 51200038
Matrigel BD Biosciences Cat# 356230
mTeSR1 media Stem Cell Technologies Cat# 85850
N-2 supplement Thermo Fisher Cat# 17502048
Neurobasal-A Medium Thermo Fisher Cat# 10888022
NT-3 PeproTech Cat# 450–03
Puromycin Sigma-Aldrich Cat# P8833
Thiazovivin Bio Vision Cat# 1681
Laminin-1 Invitrogen Cat# 23017–015
Trypsin / EDTA Thermo Fisher Cat# 25300120
Papain, Suspension Worthington Biochemical Cat# LS003127
Cytosine arabinofuranoside (AraC) Sigma-Aldrich Cat# C6645
Glutamax Thermo Fisher Cat# 35050079
TTX Fisher Scientific Cat# 50-753-2807
EDTA Sigma-Aldrich Cat# E6758-100G
Non-Essential Amino Acids Thermo Fisher Cat# 11140076
Human Holotransferrin Gemini Bio Cat# 800-131P
Total Human Abeta ELISA Clonetech Cat# 27729A
DMSO, Cell Culture Grade Sigma Cat# D2650
DAPT Tocris Cat# 2634
LY411575 Selleckchem Cat# S2714
Rosuvastatin Selleckchem Cat# S2169
Simvastatin Selleckchem Cat# S1792
TRIzol Invitrogen Cat# 15596026
RNeasy Plus Mini Kit Qiagen Cat# 74104
Filipin Sigma Cat# SAE0088
Amplex Red Cholesterol Kit Invitrogen Cat# A12216
Experimental Models: Cell Lines
Human H1-ESCs WiCell Research Institute Cat# WA01
HEK293T cells ATCC Cat# CRL-11268
Experimental Models: Organisms/Strains
CD-1 IGS mouse Charles River Cat# Crl:CD1(ICR)
Quantitative qRT-PCR
Human ACAT2 IDT Hs.PT.56a.26153626
Human ACTB IDT Hs.PT.39a.22214847
Human DBH IDT Hs.PT.58.39251730
Human DHCR24 IDT Hs.PT.58.4561516
Human DHCR7 IDT Hs.PT.58.38763048
Human DUSP4 IDT Hs.PT.58.1640850
Human DUSP5 IDT Hs.PT.58.1558918
Human EGR1 IDT Hs.PT.58.40805543.g
Human FDFT1 IDT Hs.PT.58.25526506
Human FOS IDT Hs.PT.58.15540029
Human HMGCR IDT Hs.PT.58.41105492
Human HMGCS1 IDT Hs.PT.58.4084870
Human IDI1 IDT Hs.PT.58.19303620
Human JUNB IDT Hs.PT.58.27174746.g
Human LDHA IDT Hs.PT.58.22929122
Human LDLR IDT Hs.PT.58.2004261
Human LSS IDT Hs.PT.58.24976485
Human MAP2 IDT Hs.PT.58.20680759
Human MVD IDT Hs.PT.58.39035173
Human NAB2 IDT Hs.PT.58.24622150
Human NR4A1 IDT Hs.PT.58.20779713
Human SCD IDT Hs.PT.58.45714389
Human SREBF2 IDT Hs.PT.58.45335433
Human SV2C IDT Hs.PT.58.4640250
Human TH IDT Hs.PT.58.369742
Human TMEM97 IDT Hs.PT.58.40917738
Human VEGFA IDT Hs.PT.58.1149801
Human VGF IDT Hs.PT.58.26072166
Recombinant DNA
FUW-TetO-Ng2-T2A-puromycin Zhang et al., 2013 52047 Addgene (lentiviral vector)
FUW-rtTA Zhang et al., 2013 20342 Addgene (lentiviral vector)
FUW-TetO-EGFP Vierbuchen et al., 2010 30130 Addgene (lentiviral vector)
pREV Dull et al., 1998 12253 Addgene (lentiviral helper vector)
pRRE Dull et al., 1998 12251 Addgene (lentiviral helper vector)
pVSVg Patzke et al., 2019 12259 Addgene (lentiviral helper vector)
Deposited Datasets
Bulk RNA-seq data GEO GSE206102
Software and Algorithms
ImageJ NIH RRID: SCR_003070
ImageStudio software Li-Cor RRID:SCR_013715
pClamp Molecular Devices RRID:SCR_011323
Nikon NIS-Elements Nikon RRID:SCR_014329
GraphPad Prism GraphPad Prism RRID:SCR_002798
RStudio RStudio Team RRID:SCR_000432
DESeq2 Bioconductor (Love et al., 2014) RRID:SCR_015687