After publication of this article [1], concerns were raised about missing data, reporting of the statistical analysis performed as part of the work, and the values in Table 1.
Table 1. Updated statistical results concerning the factors ‘housing’ and ‘handling’.
Effects/ interactions | Post hoc test (Tukey) | Effect size (Cohen’s d) | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Test | Parameter | Statistical test | Housing | Handling | Housing x handling | Hand vs. forceps | Hand vs. tube | Forceps vs. tube | Housing | Hand vs. forceps | Hand vs. tube | Forceps vs. tube | |
Clinical parameters | Body weight | weight, week 8 (g) | ANOVA | *p = 0.039, F = 4.43, df = 1 | n.s. | n.s. | n.s. | n.s. | n.s. | -0.57 | -0.07 | 0.02 | 0.09 |
Temperature difference | temperature difference, week 7 (°C) | ANOVA | *p = 0.046, F = 4.14, df = 1 | n.s. | n.s. | n.s. | n.s. | n.s. | 0.55 | -0.49 | -0.45 | 0.04 | |
temperature difference, week 8 (°C) | n.s. | **p = 0.009, F = 4.99, df = 2 | n.s. | **p = 0.01 | n.s. | p = 0.059 | 0.10 | -0.82 | -0.21 | 0.67 | |||
Stress induced hyperthermia | temperature difference, week 8 (°C) | Chi-squared | n.s. | *p = 0.028 | *p = 0.019 | n.s. | *p = 0.019 | ||||||
Blood glucose | Blood glucose, week 8 (mmol/L) | ANOVA | n.s. | n.s. | **p = 0.005, F = 6.5, df = 2 | n.s. | n.s. | n.s. | -0.13 | 0.33 | 0.36 | 0.09 | |
Fecal corticosterone metabolites | corticosterone, week 7 (pg/well) | ANOVA | **p = 0.005, F = 8.98, df = 1 | n.s. | n.s. | n.s. | n.s. | n.s. | -1.00 | 0.20 | -0.50 | -0.56 | |
corticosterone, week 7 (ng/0.05 g feces) | **p = 0.005, F = 8.98, df = 1 | n.s. | n.s. | n.s. | n.s. | n.s. | -1.00 | 0.20 | -0.50 | -0.56 | |||
corticosterone, week 7–3 (pg/well) | ANOVA, repeated measurements | **p = 0.002, F = 10.79, df = 1 | n.s. | n.s. | n.s. | n.s. | n.s. | ||||||
corticosterone, week 7–3 (ng/0.05 g feces) | **p = 0.002, F = 10.77, df = 1 | n.s. | n.s. | n.s. | n.s. | n.s. | |||||||
Behavioral analysis | BS of aggression-associated parameters | cages showing aggression, week 5–8, attack yes/no | Chi squared | / | **p = 0.002 | **p = 0.004 | n.s. | *p = 0.02 | |||||
Nest-test | quality, week 3, 5 h scores | Mann-Whitney-U or Kruskal-Wallis | *p = 0.025 | n.s. | n.s. | n.s. | n.s. | ||||||
quality, week 4, 5 h scores | **p = 0.01 | n.s. | n.s. | n.s. | n.s. | ||||||||
quality, week 6, 24 h scores | **p = 0.01 | n.s. | n.s. | n.s. | n.s. | ||||||||
quality, week 8, 24 h scores | *p = 0.044 | p = 0.061 | *p = 0.033 | n.s. | n.s. | ||||||||
quality, week 3–8, 5 h scores |
***single: p < 0.001 ***group: p < 0.001 |
***hand: p < 0.001 *forceps: p = 0.037 ***tube: p = 0.001 | *SH p = 0.011 SF: n.s. *ST: p = 0.013 ***GH: p = 0.001 GF: n.s. GT: p = 0.068 | ||||||||||
quality, week 3–8, 24 h scores | *single: p = 0.027; group: p = 0.102 | hand: p = 0.32; forceps: p = 0.145; *tube: p = 0.049 | SH: n.s. SF: n.s. *ST: p = 0.043; GH: n.s. GF: n.s. GT: n.s. | ||||||||||
Openfield | distance to walls 0–10 min (cm) | ANOVA | **p = 0.006, F = 8.76, df = 1 | n.s. | n.s. | n.s. | n.s. | n.s. | -0.89 | -0.15 | 0.54 | 0.69 | |
time in center 0–10 min (s) | **p = 0.0011, F = 7.2, df = 1 | n.s. | n.s. | n.s. | n.s. | n.s. | 0.93 | 0.12 | -0.38 | -0.56 | |||
Social Novel-Object test | distance moved 0–5 min (cm) | ANOVA | n.s. | n.s. | *p = 0.035, F = 3.75, df = 2 | n.s. | n.s. | n.s. | -0.02 | 0.15 | 0.51 | 0.39 | |
velocity 0–5 min (cm/sec) | n.s. | n.s. | *p = 0.036 | n.s. | n.s. | n.s. | -0.05 | 0.15 | 0.50 | 0.37 | |||
time in center 0–10 min (s) | *p = 0.043, F = 4.4, df = 1 | n.s. | n.s. | n.s. | n.s. | n.s. | -0.70 | 0.15 | -0.03 | -0.15 | |||
Light/dark box test | exit latency (s) | Mann-Whitney-U or Kruskal-Wallis | n.s. | *p = 0.031 | n.s. | **p = 0.007 | n.s. | ||||||
tail rattling (s) | Mann-Whitney-U or Kruskal-Wallis | *p = 0.036 | n.s. | n.s. | n.s. | n.s. | |||||||
aggressive bite (s) | *p = 0.043 | n.s. | n.s. | n.s. | n.s. | ||||||||
attack (s) | *p = 0.024 | n.s. | n.s. | n.s. | n.s. | ||||||||
fighting (s) | *p = 0.016 | n.s. | n.s. | *p = 0.038 | n.s. |
n.s = no significance. Identification of overall effects of the factors ‘handling’ and ‘housing’ as well as interaction effects. Asterisks indicate the level of significance
(* p ≤ 0.05;
** p ≤ 0.1;
*** p ≤ 0.001). Data is split in ‘clinical parameters’ and ‘behavioral analysis’ for better overview. Non-parametric tested parameters are highlighted in grey. The effect size (Cohen’s d) was calculated for normal distributed data analyzed with ANOVA. Parameters not appearing in this table revealed non-significant results.
In discussing these concerns with the authors, updated values for Table 1 were provided. The values for Effect size (Cohen’s d) for weight, week 8 (g); temperature difference week 7 (°C); and temperature difference, week 8 (°C) should be updated to -0.57, 0.55, and 0.10, respectively. An updated table is provided in Table 1. It was also noted that the email address for the corresponding author was no longer correct. The correct email address for Sinja Mertens is sinja.mertens@web.de.
As part of its review into this matter, the journal requested additional details regarding the statistical analysis performed, in addition to a request related to data availability. The following was requested:
Further details on how repeated-measures analysis was performed, for example indicating whether this was done using linear mixed effect models or MANOVAs.
Whether one-way or two-way ANOVAs were performed and if the latter, whether a type 1 or type 2 ANOVA was performed.
Further details on how Cohen’s d was calculated.
All data necessary to replicate the study’s findings be made available in a public data repository.
The authors did not respond to these requests. A spreadsheet with data associated with the study was provided in prior communications, but the journal was unable to obtain permission from the authors to publish this file.
In light of the unresolved concerns relating to the statistical analysis performed and data availability, the PLOS ONE Editors issue this Expression of Concern.
Reference
- 1.Mertens S, Vogt MA, Gass P, Palme R, Hiebl B, Chourbaji S (2019) Effect of three different forms of handling on the variation of aggression-associated parameters in individually and group-housed male C57BL/6NCrl mice. PLoS ONE 14(4): e0215367. 10.1371/journal.pone.0215367 [DOI] [PMC free article] [PubMed] [Google Scholar]