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. 2023 Nov 29;18(11):e0250909. doi: 10.1371/journal.pone.0250909

Incidence of long-term post-acute sequelae of SARS-CoV-2 infection related to pain and other symptoms: A systematic review and meta-analysis

Hiroshi Hoshijima 1, Takahiro Mihara 2, Hiroyuki Seki 3, Shunsuke Hyuga 4, Norifumi Kuratani 5, Toshiya Shiga 6,*
Editor: Huzaifa Ahmad Cheema7
PMCID: PMC10686440  PMID: 38019841

Abstract

Background

Persistent symptoms are reported in patients who survive the initial stage of COVID-19, often referred to as “long COVID” or “post-acute sequelae of SARS-CoV-2 infection” (PASC); however, evidence on their incidence is still lacking, and symptoms relevant to pain are yet to be assessed.

Methods

A literature search was performed using the electronic databases PubMed, EMBASE, Scopus, and CHINAL and preprint servers MedRχiv and BioRχiv through January 15, 2021. The primary outcome was pain-related symptoms such as headache or myalgia. Secondary outcomes were symptoms relevant to pain (depression or muscle weakness) and symptoms frequently reported (anosmia and dyspnea). Incidence rates of symptoms were pooled using inverse variance methods with a DerSimonian-Laird random-effects model. The source of heterogeneity was explored using meta-regression, with follow-up period, age and sex as covariates.

Results

In total, 38 studies including 19,460 patients were eligible. Eight pain-related symptoms and 26 other symptoms were identified. The highest pooled incidence among pain-related symptoms was chest pain (17%, 95% confidence interval [CI], 11%-24%), followed by headache (16%, 95% CI, 9%-27%), arthralgia (13%, 95% CI, 7%-24%), neuralgia (12%, 95% CI, 3%-38%) and abdominal pain (11%, 95% CI, 7%-16%). The highest pooled incidence among other symptoms was fatigue (44%, 95% CI, 32%-57%), followed by insomnia (27%, 95% CI, 10%-55%), dyspnea (26%, 95% CI, 17%-38%), weakness (25%, 95% CI, 8%-56%) and anosmia (19%, 95% CI, 13%-27%). Substantial heterogeneity was identified (I2, 50–100%). Meta-regression analyses partially accounted for the source of heterogeneity, and yet, 53% of the symptoms remained unexplained.

Conclusions

The current meta-analysis may provide a complete picture of incidence in PASC. It remains unclear, however, whether post-COVID symptoms progress or regress over time or to what extent PASC are associated with age or sex.

Introduction

A broad range of symptoms have been reported to persist beyond the acute phase of SARS-CoV-2 virus infection [16]. These are referred to as “long COVID” [1, 3, 5, 6], “long-hauler” [5] or “Post-COVID-19 syndrome” [4, 5]. The National Institute of Health currently advocates calling these symptoms post-acute sequelae of SARS-CoV-2 infection (PASC) [7]. This syndrome is sometimes covered sensationally by news media or social networks, but little is known about its etiology, natural history, risk factors or therapeutic interventions. Even more, evidence on its incidence is still lacking.

On a cellular level, the spike protein in the SARS-CoV-2 virus combines with angiotensin-converting enzyme 2 (ACE2) receptor, invades human cells, and injures multiple organs [8]. Central and peripheral nerve systems are one of the most susceptible targets for SARS-CoV-2 virus (neurotropism) [9]. Frequently reported symptoms range from fatigue, muscle weakness and memory loss to anosmia, ageusia, confusion and headache [16, 10]. Some of these symptoms are directly or indirectly related to chronic pain, often worsening quality of life for a long period. As well, a prolonged period of mechanical ventilation in the ICU may cause what is called “post intensive care syndrome” or “ICU-acquired weakness” [9], manifesting as cognitive dysfunction, muscle atrophy, sensory disruption and joint-related pain [8]. These patients will be at elevated risk of developing chronic pain. Furthermore, SARS-CoV-2 virus causes “cytokine storm”, which aggravates damage in multiple tissues including joints and muscles that possibly triggers pain-related symptoms [8]. A recent study [11] has shown that the prevalence of new-onset headache was substantially higher in COVID-19 survivors compared with those in controlled subjects. Nevertheless, pain in COVID-19 survivors has been underestimated or paid little attention. Treatment of pain in such patients is prone to be of low priority, especially due to overburdened healthcare services or difficulty in consulting with a specialist over the course of the pandemic [12].

As pain clinicians, we believe that understanding and managing pain-related symptoms along with other symptoms will help to improve the quality of life of SARS-CoV-2 survivors. Therefore, we collected currently available evidence and conducted a rapid systematic review and meta-analysis of observational studies to determine the incidence of pain-related and other symptoms in SARS-CoV-2 convalescents.

Methods

We defined long-term complications as symptoms from which patients suffered for more than 1 month after onset of the first COVID-19 symptoms or after discharge from hospital. A meta-analysis was conducted according to the reporting guidelines for the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) [13]. The protocol was previously registered on PROSPERO (CRD42021228393).

Search strategy

Three reviewers (HH, SH and TS) searched the electronic databases PubMed, EMBASE, Scopus and CHINAL and preprint servers MedRχiv and BioRχiv. No language restriction was applied. The last search was done on January 15, 2021. The full search strategy is described in S1 Appendix. Reference lists of all identified articles on “long-covid” were manually searched. All relevant references obtained in the RIS (Research Information Systems) formats were transferred to EndNote X8.2 (Clarivate, Philadelphia, PA, USA) and web-platform manager Covidence (Melbourne, Australia).

Eligibility criteria

Studies involving adults (>18 years old) with a confirmed diagnosis of SARS-CoV-2 were included, as were studies that followed up patients for a minimum of 2 weeks after discharge. Studies only focusing on acute symptoms from admission without any mention of long-term symptoms were excluded. Prospective and retrospective cohort studies were also included. Reviews, editorials, meta-analyses, case reports, case series and case-control studies were excluded. Regardless of whether a reported symptom was pain-related or not, studies reporting any relevant “long-covid” symptoms were included. Studies reporting only radiological findings of lung or brain were excluded.

Screening and data extraction

Two reviewers (HH and TS) independently screened titles and abstracts of the obtained references by using Covidence. Disagreements were resolved by discussion with a third reviewer (SH). Data extraction was performed by five reviewers (HH, TM, HS, SH and TS), and the extracted data were saved in an Excel spreadsheet. Extracted data included study setting, country where study was performed, patient setting, diagnostic criteria of SARS-CoV-2, respiratory support, mean age, percentage of males, follow-up period and information for evaluating study quality. The primary outcome was defined as pain-related symptoms such as headache or myalgia. The secondary outcome was defined as symptoms other than but relevant to pain such as depression or fatigue, or frequently reported symptoms such as anosmia or dyspnea. When data were reported as a graph only, we reproduced numerical data using Plot Digitizer (http://plotdigitizer.sourceforge.net).

Assessment of study quality

The Newcastle-Ottawa scale for cohort studies [14] was used to assess the methodological quality of the studies by the five reviewers. Briefly, the scale consists of three subcategories: selection, comparability and outcome and 9 items. However, we focused on pooled incidence of long-COVID symptoms rather than any treatment effects and all patients exposed to SARS-Cov-2 virus (excluding the non-exposed cohort); therefore, some of the items were impossible to evaluate such as selection of the non-exposed cohort and comparability. Thus, these two items were excluded from the checklist, and study quality was assessed by the rest of the items (S1 Appendix). One point was given for each item, for a maximum score of 6 and a minimum score of 0.

Statistical analysis

At least 3 studies were required per one symptom, due to constraints in performing data synthesis. The proportions of symptoms in an individual study were pooled using inverse variance methods following logit transformation [15]. Between-study variances were quantified using the DerSimonian-Laird estimator [16]. To calculate 95% confidence intervals (CIs) in an individual study, the Clopper-Pearson interval was used. The I2 statistic was used as a measure of heterogeneity (I2 >60%: high heterogeneity; 40–60%: moderate heterogeneity; <40%: low heterogeneity). Sensitivity analysis and subgroup analysis were not performed because our aim in this meta-analysis was to exploratorily collect currently available evidence of overall incidence. Because of possible selection bias, the top 3 most frequent symptoms were ranked in each study, and we aggregate them in an overall ranking.

We explored the source of heterogeneity by meta-regression using a mixed-effects model [17]. We incorporated three covariates (follow-up period, mean age and percentage of males) with fixed effects, and each study as a random effect. R2 was used as a measure of the amount of heterogeneity that could be accounted for by the covariate. Briefly, an index R2 value is defined as the ratio of explained heterogeneity to total heterogeneity, with a range of 0% to 100%. We plotted the logit transformed incidence of each symptom on the Y axis and the covariate on the X axis, along with predicted regression line (bubble plot).

Statistical significance was set at a 2-tailed α = .05. To evaluate small-study effects (publication bias), a funnel plot was depicted and Egger test was performed [18], with significance applied at P < .010. All statistical analyses were conducted using the meta package of R version 4.0.3 (The R Foundation for Statistical Computing) and RStudio 1.4 (Boston, MA).

Results

The initial search yielded 1290 citations, of which 105 potentially relevant studies were assessed in full text. Thirty-five studies [1953] were included. Three studies were manually added according to a reviewer’s suggestion during the revision process of the manuscript [5456]. Finally, 38 studies comprising 19,460 patients were included in the meta-analysis (Fig 1).

Fig 1. PRISMA flow diagram for literature search, study screening and selection.

Fig 1

All studies were written in English. A summary of the included studies is presented in S1 Table. Studies were reported mainly from Europe, followed by the USA and China. Follow-up duration ranged from 0.5 to 7 months.

The results of the Newcastle-Ottawa scale are shown in S1 Table. Most of the studies (33/38, 87%) scored 5 or 6, and the median score of the 38 studies was 5 (range: 3–6).

The results of each symptom on the forest plot are shown in S1 Fig. The pooled incidence of each primary and secondary outcome is shown in order of frequency in Figs 2 and 3, respectively.

Fig 2. Summary random effects estimates with 95% confidence interval (CI) from 8 meta-analyses on the incidence of pain-related symptoms.

Fig 2

I2 represents the degree of heterogeneity, and Egger’s P represents publication bias.

Fig 3. Summary random effects estimates with 95% confidence interval (CI) from 8 meta-analyses on the incidence of other symptoms.

Fig 3

I2 represents the degree of heterogeneity, and Egger’s P represents publication bias.

The most frequent symptom among pain-related symptoms was chest pain (17%, 95% CI, 12%-25%), followed by headache (16%, 95% CI, 9%-27%), arthralgia (13%, 95% CI, 7%-24%), neuralgia (12%, 95% CI, 3%-38%) and abdominal pain (11%, 95% CI, 7%-16%). The most frequent symptom in the secondary outcomes was fatigue (45%, 95% CI, 32%-59%), followed by insomnia (26%, 95% CI, 9%-57%), dyspnea (25%, 95% CI, 15%-38%), weakness (25%, 95% CI, 8%-56%) and anosmia (19%, 95% CI, 13%-27%).

Regarding the most frequent symptoms reported in each article, 35 articles were included after excluding articles focusing on a single symptom such as headache [39]. Our results showed that the three most frequent symptoms summarized were fatigue (n = 20), dyspnea (n = 17), cough (n = 13), followed by anosmia (n = 12) and fever (n = 6) (S1 Table).

The results of R2 obtained by meta-regression are shown in the Table 1, and those of the statistical analyses and bubble plots are detailed in S1 Fig.

Table 1. Results of meta-regression to explore the source of heterogeneity.

No of studies Heterogeneity (I2) Amount of heterogeneity accounted for (R2) (%)
Follow-up period Age Gender (male)
Pain-related symptoms
Chest pain 17 99 0 0 0
Headache 21 99 0 0 0
Arthralgia 13 99 0 0 0
Neuralgia 3 97 100 (+) 92 (-) 69 (+)
Abdominal pain 10 98 0 0 0
Myalgia 18 100 0 0 0
Sore throat 17 99 0 0 0
Ear pain 4 99 0 0 0
Other symptoms
Fatigue 28 99 0 0 0
Insomnia 7 100 44 (+) 28 (-) 75 (+)
Dyspnea 23 99 34 (+) 0 0
Weakness 5 98 0 64 (-) 0
Anosmia 24 99 0 35 (-) 0
Cough 23 99 0 42 (-) 10 (-)
Ageusia 19 99 0 0 19 (-)
Memory impairment 9 98 73 (+) 5 (+) 40 (+)
Confusion 5 94 0 0 0
Depression 10 99 55 (-) 0 23 (+)
Fever 17 99 0 0 0
Rhinorrhea 8 98 0 0 0
Anxiety 8 99 66 (+) 0 67 (+)
Palpitation 8 100 0 0 0
Sneezing 3 99 0 0 0
Alopecia 6 96 0 0 0
Anorexia 9 99 0 0 0
Nasal blockage 4 74 33 (-) 0 70 (+)
Diarrhea 19 99 0 0 0
Vertigo (Dizziness) 13 99 0 0 0
Weight loss 13 93 23 (-) 0 40 (+)
Sputum 6 50 65 (-) 0 0
Chills 6 99 72 (+) 0 77 (+)
Nausea 11 99 54 (+) 1 (-) 0
Vomiting 6 91 7 (+) 0 0

R2 represents a measure of the amount of heterogeneity that can be explained by the covariate. Bold numbers indicate that a significant correlation was found between the symptom and the covariate. + or–in parenthesis indicates a positive or negative coefficient in the regression model. Note that for insomnia and follow-up period, for instance, the incidence of insomnia is significantly higher when the follow-up period increases (positive correlation). Note that for ageusia and sex, the incidence of ageusia is significantly higher when the ratio of males in a study population decreases (inverse correlation).

Among pain-related symptoms, significant correlations were identified only for neuralgia: however, only three studies with this symptom were included. For instance, the regression coefficient for follow-up period was 0.39 (logit transformed), which means that every one month of follow-up corresponds to an increase of 1.45 units (45% increase) in prevalence in patients who developed neuralgia after acute COVID-19 infection. For the other symptoms, significant correlations were found for insomnia, dyspnea, weakness, anosmia, cough, ageusia, memory impairment, depression, anxiety, nasal blockage, weight loss, sputum, chills and nausea. Among the symptoms overall, 53% remained unexplained when using the three covariates in the model.

The results of the funnel plots are shown in S1 Fig. For pain-related symptoms, small-study effects as assessed by Egger test were observed for 4 of 8 symptoms. For other symptoms, small-study effects were observed for 15 of 26 symptoms. In total, small-study effects were identified for 56% of the symptoms.

Discussion

The current meta-analysis suggested three main findings. First, pain-related symptoms in COVID-19 survivors were multifarious with an incidence of 5–17%. Second, other symptoms were more multifaceted with incidences ranging from 2% to 45%. Third, every symptom varied extensively in its incidence, and the three major covariates (follow-up, age and sex) could not explain the heterogeneity.

Among pain-related symptoms, the highest pooled incidence was chest pain (17%), followed by headache (16%), arthralgia (13%), neuralgia (12%) and abdominal pain (11%). Chest pain is also referred to as “lung burn”, which is considered to be a result of lung injury by SARS-CoV-2 infection [6]. Alternatively, other researchers pointed out that chest pain may result from pericarditis caused by infection [29]. Headache is one of the most common central nervous system symptoms in patients with SARS-CoV-2 infection [57, 58]. It can persist over the period of the initial infection [59], or it can develop as a new-onset form during healing [11]. Proposed mechanisms include direct invasion of trigeminal nerve endings by SARS-CoV-2 via disruption of the brain-blood barrier, trigeminovascular activation via involvement of endothelial cells with ACE2 expression, or triggering of perivascular trigeminal nerve endings by release of cytokines and pro-inflammatory mediators [59].

Among other symptoms, almost half of the patients developed fatigue. Generally, fatigue is considered to be closely related to chronic pain. Myalgic encephalomyelitis/chronic fatigue syndrome (ME/CFS) [60] or fibromyalgia [61] are good examples. A recent report suggested that there are similarities and overlap in pathology between long COVID symptoms and ME/CFS [4, 60]. As fatigue is often refractory to a single approach, holistic management such as rehabilitation or cognitive behavioral therapy is required [6]. Weakness, often accompanied by myalgia and arthralgia, is a musculoskeletal manifestation of SARS-CoV-2 infection [62]. Muscle fiber atrophy, extensive use of corticosteroids, prolonged mechanical ventilation or systematic inflammation may be the causes of weakness [62].

From the results of the meta-regression, the incidence of neuralgia was significantly associated with follow-up period, age or sex to some extent; however, only 3 studies were included with this symptom. Therefore, it is difficult to consider this result to be valid. As another example, an inverse association was found between the incidence of weakness and age, but we could not explain this well. In any case, we are aware that these statistical models are preliminary and exploratory, and 53% of symptoms were not explainable despite three typical covariates being incorporated into the model. Symptoms of long COVID are reported to be on-and-off, cyclic or multiphasic [5], which is why the linear regression model did not fit well.

During the course of our study, a similar meta-analysis related with pain were published [63]. Although this might weaken the originality of our study, in the publication, the most frequently reported pain-related symptoms and their incidence were comparable with those reported in our studies. For instance, chest pain is the most reported symptoms, and its incidence ranges between 7.8–23.6%.

This study has several limitations. First, considerable heterogeneity was found in most of the symptoms, and meta-regression could not explain it in just over half of the symptoms. Possible reasons may be the following: in the light of the nature of observational studies, the subjects are not homogenous. The current study includes reports from a wide range of countries; thus, the definition and diagnostic criteria of symptoms might vary from study to study. The majority of data were collected via telephone interview or online survey. A face-to-face visit was not always possible during the COVID-19 pandemic, and therefore, recall bias might possibly have occurred. Second, pain-related symptoms were less frequent compared with other symptoms. Selection bias in each study might be possible because pain-related symptoms might be underdiagnosed. Third, the current study did not include “brain fog”, “covid toe” or “post-exertional malaise”, which are widely known as post-COVID symptoms [2, 6, 26, 62], because these symptoms did not fulfill our inclusion criteria of at least three studies being required for data synthesis. However, we will be able to update this review if more reports are published on these symptoms in the future. Fourth, publication bias was identified for 56% of all symptoms. This suggested that the point estimates of the incidence of symptoms in our study might have been overestimated or underestimated. Lastly, studies performed in different geographical regions might be a potential factor contributing to the heterogeneity, which was suggested in a recent meta-analysis [64].

Conclusions

The present meta-analysis highlighted the incidence of pain-related and other typical symptoms in patients with PASC. It remains uncertain whether post-COVID symptoms progress or regress over time and to what extent PASC are associated with age or sex.

Supporting information

S1 Appendix. Literature search strategy, R code and the Newcastle-Ottawa quality assessment scale.

(DOCX)

S1 Table. Summary of studies, the results of the Newcastle-Ottawa quality assessment and most frequent symptoms ranked in each study.

(DOCX)

S1 Fig. Forest plot, bubble plot and funnel plot in each symptom.

(DOCX)

Data Availability

All relevant data are within the article and its Supporting Information files.

Funding Statement

This study was supported by International University of Health and Welfare with funding for TS. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.

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Decision Letter 0

Robert Jeenchen Chen

9 Nov 2021

PONE-D-21-13798

Incidence of Long-term Post-acute Sequelae of SARS-CoV-2 Infection Related to Pain and Other Symptoms: A Living Systematic Review and Meta-analysis

PLOS ONE

Dear Dr. Shiga,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

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Robert Jeenchen Chen, MD, MPH

Academic Editor

PLOS ONE

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Reviewers' comments:

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Comments to the Author

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Reviewer #1: Yes

Reviewer #2: Yes

**********

2. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #2: I Don't Know

**********

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Reviewer #1: Yes

Reviewer #2: Yes

**********

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Reviewer #2: Yes

**********

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Reviewer #1: I read with interest about this comprehensive systemic review of post-acute COVID-19 symptoms. Generally, the article was well written with adequate meta-analyses. I still had some concerns about this study.

1. At least some important studies were not included in the current study. I suggest authors include these studies and re-analyze your results.

a. Chopra, V., Flanders, S. A. & O’Malley, M. Sixty-day outcomes among patients hospitalized with COVID-19. Ann. Intern. Med. (2020).

b. Garrigues, E. et al. Post-discharge persistent symptoms and health-related quality of life after hospitalization for COVID-19. J. Infect. 81, e4–e6 (2020).

2. The last literature research was performed on January 15, 2021. The post-acute COVID-19 symptoms had been reported more in detail after that time. Since this study is aimed to be a living meta-analysis, is it feasible for authors to include newer publised studies after Jan 2021. At least the following should be considered:

a. Huang L, Yao Q, Gu X, et al. 1-year outcomes in hospital survivors with COVID-19: a longitudinal cohort study. Lancet. 2021; 398(10302):747-758. →Updated results from reference 31.

b. Moreno-Pérez, O. et al. Post-acute COVID-19 syndrome. Incidence and risk factors: a Mediterranean cohort study. J. Infect. (2021)

Reviewer #2: The authors use a living systematic review and meta-analysis to depict the incidence of long-term post-acute sequelae of SARS-CoV-2 infection related to pain and other symptoms. They defined long-term complications as symptoms from which patients suffered for more than one month after onset of the first COVID-19 symptoms or after discharge from hospital. There are several concerns as follows:

Major concern 1: From the results, pain-related symptoms are much less frequently noticed compared to the secondary outcome, symptoms relevant to pain such as fatigue, insomnia, dyspnea, weakness. I am wondering whether the clinical setting could be a source of selection bias. For example, a patient underwent invasive treatment might be highly sedative. The pain would be masked initially, and its related symptoms may flair up in later disease courses.

Major concern 2: Theoretically, all symptoms should be thoroughly observed from estimated onset of the disease. It would be better to have a consistent format for checking up each symptom with daily bases. Since the available published data bear witness to a high heterogeneity, I suggest the authors make a summary table to show the common symptoms according to individual report.

Major concern 3: The authors smartly described “post intensive care syndrome” or “ICU-acquired weakness" in Discussion Section. However, the sensitivity analyses based on ICU and Non-ICU patients are lacking in present draft. If the authors can provide this assessment, it would be also helpful to clarify the Major concern 1.

Minor concern, Line 216: COVID-19 survivors were multifarious with "an" incidence of 5-17%.

**********

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Reviewer #1: Yes: Wei-Chih Chen

Reviewer #2: No

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PLoS One. 2023 Nov 29;18(11):e0250909. doi: 10.1371/journal.pone.0250909.r002

Author response to Decision Letter 0


20 Mar 2022

Answers to the reviewers’ comments.

Reviewer #1: I read with interest about this comprehensive systemic review of post-acute COVID-19 symptoms. Generally, the article was well written with adequate meta-analyses. I still had some concerns about this study.

Thank you for your comments.

First of all, we attempted to update the latest articles. After screening with the same search strategy, we found a skyrocketing number of articles on this theme: More than 2,000 articles from Scopus; around 20,000 from medRxiv, and more than 400 from EMBASE. After we discussed this, we considered it impossible, within this short period of revision time, to screen, extract data, re-analyze, and extensively rewrite the manuscript. Therefore, we decided to include the only studies you have pointed out, without altering the current search period. We kindly ask for your understanding in advance.

1. At least some important studies were not included in the current study. I suggest authors include these studies and re-analyze your results.

a. Chopra, V., Flanders, S. A. & O’Malley, M. Sixty-day outcomes among patients hospitalized with COVID-19. Ann. Intern. Med. (2020).

b. Garrigues, E. et al. Post-discharge persistent symptoms and health-related quality of life after hospitalization for COVID-19. J. Infect. 81, e4–e6 (2020).

We have completed re-analyses after including these studies.

2. The last literature research was performed on January 15, 2021. The post-acute COVID-19 symptoms had been reported more in detail after that time. Since this study is aimed to be a living meta-analysis, is it feasible for authors to include newer publised studies after Jan 2021. At least the following should be considered:

a. Huang L, Yao Q, Gu X, et al. 1-year outcomes in hospital survivors with COVID-19: a longitudinal cohort study. Lancet. 2021; 398(10302):747-758. →Updated results from reference 31.

b. Moreno-Pérez, O. et al. Post-acute COVID-19 syndrome. Incidence and risk factors: a Mediterranean cohort study. J. Infect. (2021)

We have completed re-analyses after including Moreno-Pérez. As you pointed out, the Huang et al. study is certainly an update of reference 31; however, we did not include this study because it was published far beyond the current search period.

Finally, we have included the three articles that you pointed out.

In addition, we excluded the term “Living” from the manuscript title as this is no longer a “living” meta-analysis.

Reviewer #2:

The authors use a living systematic review and meta-analysis to depict the incidence of long-term post-acute sequelae of SARS-CoV-2 infection related to pain and other symptoms. They defined long-term complications as symptoms from which patients suffered for more than one month after onset of the first COVID-19 symptoms or after discharge from hospital.

Thank you for your time spent in reviewing our manuscript.

There are several concerns as follows:

Major concern 1: From the results, pain-related symptoms are much less frequently noticed compared to the secondary outcome, symptoms relevant to pain such as fatigue, insomnia, dyspnea, weakness. I am wondering whether the clinical setting could be a source of selection bias. For example, a patient underwent invasive treatment might be highly sedative. The pain would be masked initially, and its related symptoms may flair up in later disease courses.

We agree with you that pain-related symptoms are much less frequently noticed. We added this comment as a limitation in the limitations paragraph in the Discussion section. Closely related to your concern 3, we could not perform sensitivity analyses between ICU and non-ICU patients in this revision.

Major concern 2: Theoretically, all symptoms should be thoroughly observed from estimated onset of the disease. It would be better to have a consistent format for checking up each symptom with daily bases. Since the available published data bear witness to a high heterogeneity, I suggest the authors make a summary table to show the common symptoms according to individual report.

The top three most frequent symptoms were ranked in each study, and we summarized them in an overall ranking. Our results showed that most frequent symptoms summarized were fatigue (n=20), followed by dyspnea (17), cough (13), anosmia (12) and fever (6).

The detailed results are described in the Results section and eTable 3.

Major concern 3: The authors smartly described “post intensive care syndrome” or “ICU-acquired weakness" in Discussion Section. However, the sensitivity analyses based on ICU and Non-ICU patients are lacking in present draft. If the authors can provide this assessment, it would be also helpful to clarify the Major concern 1.

To perform a sensitivity analysis between ICU and non-ICU patients, we thoroughly reviewed all of the studies we included. However, we found that only two of the studies summarized ICU and non-ICU patients separately. Probably, most of patients in the rest of the studies did not appear to be transferred to the ICU. Therefore, a sensitivity analysis was difficult to perform.

Minor concern, Line 216: COVID-19 survivors were multifarious with "an" incidence of 5-17%.

Thank you. We corrected this.

Attachment

Submitted filename: Response to Reviewers.docx

Decision Letter 1

Miquel Vall-llosera Camps

12 Oct 2022

PONE-D-21-13798R1Incidence of long-term post-acute sequelae of SARS-CoV-2 infection related to pain and other symptoms:A systematic review and meta-analysisPLOS ONE

Dear Dr. Shiga,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

Please submit your revised manuscript by Nov 26 2022 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.

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  • A rebuttal letter that responds to each point raised by the academic editor and reviewer(s). You should upload this letter as a separate file labeled 'Response to Reviewers'.

  • A marked-up copy of your manuscript that highlights changes made to the original version. You should upload this as a separate file labeled 'Revised Manuscript with Track Changes'.

  • An unmarked version of your revised paper without tracked changes. You should upload this as a separate file labeled 'Manuscript'.

If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter.

If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols.

We look forward to receiving your revised manuscript.

Kind regards,

Miquel Vall-llosera Camps

Senior Editor

PLOS ONE

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Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice.

Additional Editor Comments:

I would like to sincerely apologise for the delay you have incurred with your submission. As mentioned previously, during our final internal checks on this submission, we noticed a potential concern regarding the quality of the peer review process. To ensure that your work received a thorough and objective evaluation at PLOS ONE, we considered necessary to invite additional reviewers. We have now received their completed reviews; the comments are available below.

Although the previous reviewers are happy with your response to their previous comments, the additional reviewers some raised scientific concerns about your study. In particular, reviewer#5 raised concerns that the literature search of your manuscript is out of date. We acknowledge that this concern has been raised previously during this peer review and that you responded that due to the high volume of publications rewriting the manuscript would not be possible. In consideration of your response, to address this concern we would request including in your manuscript a discussion on research published after the search was complete and discussion of your study in the context of the recent published literature.

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Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation.

Reviewer #1: All comments have been addressed

Reviewer #3: All comments have been addressed

Reviewer #4: All comments have been addressed

Reviewer #5: (No Response)

Reviewer #6: All comments have been addressed

**********

2. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #3: Yes

Reviewer #4: Yes

Reviewer #5: No

Reviewer #6: Yes

**********

3. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #3: Yes

Reviewer #4: Yes

Reviewer #5: Yes

Reviewer #6: Yes

**********

4. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #3: Yes

Reviewer #4: Yes

Reviewer #5: Yes

Reviewer #6: Yes

**********

5. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #3: Yes

Reviewer #4: Yes

Reviewer #5: Yes

Reviewer #6: Yes

**********

6. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: The authors addressed reviewer's comment and revised the manuscript accordingly. I suggest the current study accepted for publication.

Reviewer #3: The authors submitted a revised version of the article along with thorough explanation of the way by which the changes and corrections were made. I have no serious flaws to the article in its revised version.

Reviewer #4: The authors submitted a revised version of the paper along with the clear explanation if the ways by which the corrections were made. I have no serious flaws to the article in its revised version.

Reviewer #5: This meta analysis is totally out of date. The last search was January 2021, now we are September 2022. One year in COVID-19 research implies that several papers and MA about post-COVID pain have been published. This paper does not add nothing to the literature and does not include most updated data.

Reviewer #6: This manuscript describes a systematic review and meta-analysis to estimate the incidence rate for pain and other symptoms due to “long COVID.”

This study used several large electronic databases (including MediRxiv and BioRxiv) to search articles before Jan 15, 2021. In total, 1290 articles were identified in the literature search, and finally, 35 studies were included in the study after a rigorous screening and selection process. The analyses followed a PRISMA standard for meta-analysis, and the inter-study heterogeneity was assessed using I^2 statistics. In addition, the authors investigated the potential source of heterogeneity using meta-regression with a mixed-effects model. Furthermore, the publication bias was assessed by Egger’s P statistics and funnel plots.

Overall, the study method is solid and rigorous. This study provides comprehensive results for long COVID related pain and other symptoms.

I have two questions just for curiosity.

1. The result “every one month of follow-up corresponds to an increase of 1.45 units (45% increase) in prevalence in patients who developed neuralgia after acute COVID-19 infection” indicate the longer follow-up time is associated high incidence rate of neuralgia. Is that because neuralgia will take time to develop, so the studies with short follow-up time can not detect the development of neuralgia?

2. Will different regions of study (e.g. Europe, US and China) be a potential factor contributing to the heterogeneity, as people from different regions may have different tolerances or thresholds of pain?

**********

7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

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Reviewer #1: No

Reviewer #3: Yes: Alexander E Berezin, FESC, Professor of Medicine, MD, PhD, DSci

Reviewer #4: No

Reviewer #5: No

Reviewer #6: No

**********

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PLoS One. 2023 Nov 29;18(11):e0250909. doi: 10.1371/journal.pone.0250909.r004

Author response to Decision Letter 1


13 Nov 2022

The original reviewers’ comments are expressed in “bold” type, and our comments are expressed in “plain” type.

Reviewer #1: The authors addressed reviewer's comment and revised the manuscript accordingly. I suggest the current study accepted for publication.

Thank you very much for your comment and recommendation.

Reviewer #3: The authors submitted a revised version of the article along with thorough explanation of the way by which the changes and corrections were made. I have no serious flaws to the article in its revised version.

Thank you for your comments.

Reviewer #4: The authors submitted a revised version of the paper along with the clear explanation if the ways by which the corrections were made. I have no serious flaws to the article in its revised version.

Thank you for your comments.

Reviewer #5: This meta analysis is totally out of date. The last search was January 2021, now we are September 2022. One year in COVID-19 research implies that several papers and MA about post-COVID pain have been published. This paper does not add nothing to the literature and does not include most updated data.

We totally agree with your comments.

To be honest, this paper has a long history. It was originally published in MedRxiv on April 8, 2021, before its submission to PLOS One. The manuscript revision process took more than six months, after which the manuscript was officially accepted by PLOS One on August 13, 2022.

One month later, after our payment to the journal, however, acceptance was suddenly retracted by the editorial office due to a potential concern regarding the quality of the peer review process. So, this explains the delay.

During this time, thousands of articles on long COVID were published, so we think that would be impossible, within this short period of revision time, to screen and extract new data, re-analyze it, and extensively rewrite the manuscript. We believe that the previous reviewers were happy with our response to these circumstances. We kindly ask for your understanding in advance.

However, as the editor requested, we attempted to discuss our results in the context of the recently published literature. We found one similar meta-analysis published by Fernandez-de-las-Penas et al. in 2022 (This paper was submitted on 26 May, 2021, when our preprint has already published; therefore, we were first). In the paper, the most frequent pain-related symptoms and their incidences were comparable with those in our studies. For instance, chest pain is the most reported, and its incidence ranges between 7.8-23.6%. We added this in the Discussion section as follows: “During the course of our study, a similar meta-analysis related with pain were published [63]. Although this might weaken the originality of our study, in the publication, the most frequently reported pain-related symptoms and their incidence were comparable with those reported in our studies. For instance, chest pain is the most reported symptoms, and its incidence ranges between 7.8-23.6%.

Reviewer #6: This manuscript describes a systematic review and meta-analysis to estimate the incidence rate for pain and other symptoms due to “long COVID.”

This study used several large electronic databases (including MediRxiv and BioRxiv) to search articles before Jan 15, 2021. In total, 1290 articles were identified in the literature search, and finally, 35 studies were included in the study after a rigorous screening and selection process. The analyses followed a PRISMA standard for meta-analysis, and the inter-study heterogeneity was assessed using I^2 statistics. In addition, the authors investigated the potential source of heterogeneity using meta-regression with a mixed-effects model. Furthermore, the publication bias was assessed by Egger’s P statistics and funnel plots.

Overall, the study method is solid and rigorous. This study provides comprehensive results for long COVID related pain and other symptoms.

I have two questions just for curiosity.

1. The result “every one month of follow-up corresponds to an increase of 1.45 units (45% increase) in prevalence in patients who developed neuralgia after acute COVID-19 infection” indicate the longer follow-up time is associated high incidence rate of neuralgia. Is that because neuralgia will take time to develop, so the studies with short follow-up time can not detect the development of neuralgia?

First of all, we know you are busy, and we appreciate you taking the time to write your comments.

Regarding neuralgia, there are only three studies with high heterogeneity. Because of the small amount of available information, definite conclusions cannot be drawn. This statistic (45% increase per 1.45 units) is just an estimation calculated from the limited sample data available. We have already addressed this previously in the Discussion section as follows: “In any case, we are aware that these statistical models are preliminary and exploratory, and 53% of symptoms were not explainable despite three typical covariates being incorporated into the model. Symptoms of long COVID are reported to be on-and-off, cyclic or multiphasic [5], which is why the linear regression model did not fit well.”

2. Will different regions of study (e.g. Europe, US and China) be a potential factor contributing to the heterogeneity, as people from different regions may have different tolerances or thresholds of pain?

We think it’s probably yes. According to the meta-analysis published by Alkodyami et al. in 2022, lower incidences of fatigue, dyspnea, and loss of smell and taste were reported in Asian populations. However, meta-regression analysis with region as the covariate is beyond the aim of our study and was not included in our initial protocol, so we added this as a limitation in the Discussion section as follows: “Lastly, studies performed in different geographical regions might be a potential factor contributing to the heterogeneity, which was suggested in a recent meta-analysis [64].”

Attachment

Submitted filename: Response to Reviewers.docx

Decision Letter 2

Huzaifa Ahmad Cheema

27 Feb 2023

Incidence of long-term post-acute sequelae of SARS-CoV-2 infection related to pain and other symptoms:A systematic review and meta-analysis

PONE-D-21-13798R2

Dear Dr. Shiga,

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.

Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication.

An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org.

If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org.

Kind regards,

Huzaifa Ahmad Cheema

Academic Editor

PLOS ONE

Additional Editor Comments (optional):

Due to the long delay associated with this manuscript, I believe it should be expedited for publication as soon as possible. I believe the comments of the authors have been suitably addressed and their are no major concerns.

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation.

Reviewer #1: All comments have been addressed

Reviewer #3: All comments have been addressed

Reviewer #5: (No Response)

Reviewer #6: All comments have been addressed

**********

2. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #3: Yes

Reviewer #5: No

Reviewer #6: Yes

**********

3. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #3: Yes

Reviewer #5: No

Reviewer #6: Yes

**********

4. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #3: Yes

Reviewer #5: No

Reviewer #6: Yes

**********

5. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #3: Yes

Reviewer #5: Yes

Reviewer #6: Yes

**********

6. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: The revised manuscript addressed reviewers' and editor's suggestion adequately. I suggested this manuscript accepted for publication.

Reviewer #3: The authors gave comprehensive responces to reviewers' comments and deeply changed the manuscript. I am satisfied about the revised version of the paper.

Reviewer #5: this reviewer understand the situation that the authors comment about their manuscript but publishing a meta-analysis conducted in 2021 in 2023 is not feasible. I apologize, my opinion is the same, authors must update the review and focus only on pain symptoms.

Reviewer #6: (No Response)

**********

7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: Yes: Wei-Chih Chen

Reviewer #3: No

Reviewer #5: No

Reviewer #6: No

**********

Acceptance letter

Huzaifa Ahmad Cheema

12 Aug 2022

PONE-D-21-13798R1

Incidence of long-term post-acute sequelae of SARS-CoV-2 infection related to pain and other symptoms:A systematic review and meta-analysis

Dear Dr. Shiga:

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department.

If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org.

If we can help with anything else, please email us at plosone@plos.org.

Thank you for submitting your work to PLOS ONE and supporting open access.

Kind regards,

PLOS ONE Editorial Office Staff

on behalf of

Dr. Robert Jeenchen Chen

Academic Editor

PLOS ONE

Associated Data

    This section collects any data citations, data availability statements, or supplementary materials included in this article.

    Supplementary Materials

    S1 Appendix. Literature search strategy, R code and the Newcastle-Ottawa quality assessment scale.

    (DOCX)

    S1 Table. Summary of studies, the results of the Newcastle-Ottawa quality assessment and most frequent symptoms ranked in each study.

    (DOCX)

    S1 Fig. Forest plot, bubble plot and funnel plot in each symptom.

    (DOCX)

    Attachment

    Submitted filename: Response to Reviewers.docx

    Attachment

    Submitted filename: Response to Reviewers.docx

    Data Availability Statement

    All relevant data are within the article and its Supporting Information files.


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