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Molecular Genetics and Metabolism Reports logoLink to Molecular Genetics and Metabolism Reports
. 2023 Aug 28;37:101003. doi: 10.1016/j.ymgmr.2023.101003

Frequency of iduronate-2-sulfatase gene variants detected in newborn screening for mucopolysaccharidosis type II in Japan

Yusuke Hattori a,b, Takaaki Sawada b,c, Jun Kido b,c,, Keishin Sugawara c, Shinichiro Yoshida d, Shirou Matsumoto b,c, Takahito Inoue e,f, Shinichi Hirose g, Kimitoshi Nakamura b,c
PMCID: PMC10694771  PMID: 38053932

Abstract

Mucopolysaccharidosis II (MPS II) is an X-linked, recessive, inborn metabolic disorder caused by defects in iduronate-2-sulfatase (IDS). The age at onset, disease severity, and rate of progression vary significantly among patients. This disease is classified into severe or mild forms depending on neurological symptom involvement. The severe form is associated with progressive cognitive decline while the mild form is predominantly associated with somatic features. Newborn screening (NBS) for MPS II has been performed since December 2016, mainly in Kyushu, Japan, where 197,700 newborns were screened using a fluorescence enzyme activity assay of dried blood spots. We diagnosed one newborn with MPS II with lower IDS activity, elevated urinary glycosaminoglycans, and a novel variant of the IDS gene. In the future, NBS for MPS II is expected to be performed in many regions of Japan and will contribute to the detection of more patients with MPS II, which is crucial to the early treatment of the disorder.

Keywords: Enzyme replacement therapy, Mucopolysaccharidosis type II, Iduronate-2-sulfatase, Newborn screening, Hunter syndrome

1. Introduction

Mucopolysaccharidosis II (MPS II; Hunter syndrome; MIM: 309900) is an X-linked recessive inborn metabolic disorder caused by a defect in iduronate-2-sulfatase (IDS) [1,2]. MPS II is a systemic disease affecting multiple organs. Patients with MPS II frequently develop Mongolian spots, hepatosplenomegaly, peculiar facial features, valvular disease, joint contractures, otitis media, respiratory dysfunction, and psychomotor developmental delay [3]. Depending on the presence of neurological symptoms, the disease is classified into severe and mild forms [4,5]. The severe form is associated with progressive cognitive decline, and the mild form is predominantly associated with somatic features.

Enzyme replacement therapy (ERT) and hematopoietic stem cell transplantation (HSCT) are used to treat MPS II [5]. Previously, HSCT was the only effective treatment for central nervous system (CNS) symptoms [6]. Idursulfase beta and pabinafusp alfa were approved as social insurance medicines in 2021 in Japan. Idursulfase beta is administered into the cerebral ventricles through the fixed reservoir [[7], [8], [9]]. Pabinafusp alfa [[10], [11], [12]] is human IDS fused to the C-terminus of the heavy chain of an anti-human transferrin receptor (hTfR) antibody. It can pass through the blood-brain barrier by way of TfR-mediated transcytosis. These ERTs are expected to be effective in treating CNS symptoms. Moreover, a combination of early detection and initiation of treatment is expected to result in more effective therapeutic effects using these ERTs [13,14]. As the external manifestations of MPS II in patients are not apparent except for extensive Mongolian spots and umbilical or inguinal hernias during the neonatal and infancy periods, it is difficult for many clinicians to diagnose MPS II in infants.

In Taiwan [[15], [16], [17], [18], [19]] and a few states [[20], [21], [22], [23]] of the United States, newborn screening (NBS) for MPS II has been performed to detect patients and provide early treatment. Moreover, NBS for MPS II was added to the Recommended Uniform Screening Panel in the United States in 2022 and has been recommended for regular performance [24].

In Japan, the area where NBS for MPS II has been performed has been expanding in recent years because MPS II is the most common MPS disease in Japan [25] and effective ERTs have been approved. We have conducted NBS for MPS II since December 2016, the earliest in Japan. Here, we report and discuss the frequencies of MPS II and the IDS gene variants detected in NBS.

2. Materials and methods

2.1. Study population

A total of 197,700 newborns, 100,561 male and 97,139 female, participated in this study: 88,505 from Kumamoto Prefecture between December 2016 and July 2022, and 109,195 from Fukuoka Prefecture between April 2019 and July 2022. The number of newborns born in these two prefectures accounted for approximately 6% of all newborns born in Japan during these periods. We performed multiplex screening for some lysosomal storage diseases (LSDs; Fabry disease, Pompe disease, Gaucher disease, MPS I, and MPS II) and hypophosphatasia. Female newborns were included in this study. Informed consent was obtained from the parents of 96.2% of all newborns born in these two prefectures. Dried blood spot (DBS) samples were prepared in each maternity clinic or obstetric department as part of a routine public health program using a heel-prick procedure 4–6 days after birth. The blood spots were blotted onto filter paper (Toyo Roshi Kaisha Ltd., Tokyo, Japan) and dried for at least 4 h at room temperature (15 to 25 °C). The samples were sent to the Newborn Screening Center at KM Biologics Co. Ltd. (Kumamoto, Japan) by mail, where public-funded NBS was conducted within 1 week of preparation. The DBS samples were transferred to Kumamoto University to assess the IDS activity.

2.2. NBS program for MPS II

IDS activity was assayed in DBS samples. Newborns with IDS activity below the cutoff level (December 2016 – November 2019: <10 pmol/h/disk, December 2019 – July 2022: <5 pmol/h/disk) were recalled, and DBS samples were prepared again for a second IDS assay. Newborns whose IDS activity was still below the cutoff level were referred to the hospital for clinical assessment, and physical examination and biochemical assays were performed to detect MPS II symptoms. Informed consent was obtained again from the parents after a detailed explanation, and the IDS gene of the newborns was sequenced to confirm the diagnosis.

2.3. IDS assay in DBS samples

The IDS enzyme assays were conducted at Kumamoto University from December 2016 to January 2019 using Method I described below. From February 2019, the assays were performed at KM Biologics Co. Ltd. using Method II described below. Totals of 33,258 and 164,250 newborns were screened using Method I and II, respectively.

2.3.1. Method I

The IDS assay for Method I was developed in collaboration with KM Biologics Co. Ltd. and implemented in December 2016. A single disk (3.2 mm in diameter) was punched from the DBS cards and placed into the well of a 96-well plate (Corning Inc., Corning, NY, USA) with 200 μL of extraction solution (0.1% TritonX-100, 0.1% bovine serum albumin, and 0.05% NaN3 in H2O). After 1 h incubation at room temperature, a 20 μL aliquot of the extract was transferred to the well of a 96-well black plate (PerkinElmer, Waltham, MA, USA) and 20 μL of substrate solution (0.125 mM 4-methylumbelliferyl-α-L-idopyranosiduronic acid-2-sulfate disodium salt, 5.0 mM cerium acetate, and 0.75 μg/mL recombinant laronidase (Sanofi K.K., Tokyo, Japan) in 50 mM citrate–sodium phosphate buffer, pH 4.5) was added. After 3 h incubation at 38 °C, 200 μL of reaction stop solution (10 mM EDTA in 300 mM glycine/NaOH buffer, pH 10.6) was added. Next, the fluorescence intensity was analyzed at excitation and emission wavelengths of 370 and 465 nm, respectively. Enzyme activity was calculated as picomoles of 4-methylumbelliferone (4-MU) released per hour per disk (pmol/h/disk).

2.3.2. Method II

Method II was performed using an assay kit (Enzaplate LSD; distributed by Siemens Healthcare Diagnostics K.K., Tokyo, Japan) and implemented since February 2019. The extraction, substrate, and stop solutions included in the kit were the same as those used in Method I. This kit, designed for multiplex screening for LSDs and hypophosphatasia, was developed by Daiichi Kishimoto Clinical Laboratories (Sapporo, Japan) and Sapporo Immuno Diagnostic Laboratory Co. Ltd. under the license of KM Biologics Co. Ltd. (see details at intellectual property JP6989872). Briefly, a single 3.2-mm diameter disk punched from a DBS card was incubated in a 96-well plate with 200 μL of extraction solution. In a 96-well black plate, a 20 μL aliquot of the extract was then added to 40 μL of substrate solution and incubated at 38 °C for 3 h, after which 200 μL of reaction stop solution was added. The fluorescence intensity was analyzed at excitation and emission wavelengths of 370 and 465 nm, respectively. The molar product quantities in the assay wells were calculated based on linear regression of the standard curve. The enzyme activity was calculated as picomoles of 4-MU released per hour per disk (pmol/h/disk).

2.4. Molecular analysis of the IDS gene

The IDS gene and its flanking regions were amplified by long-range PCR using three forward and reverse primer sets (Supplemental Data 1). The PCR was performed as follows: 94 °C for 2 min, followed by 30 cycles at 98 °C for 10 s and 64.3 °C for 30 s, and 68 °C for 13 min 36 s using KOD FX (Toyobo, Osaka, Japan) and a Veriti Thermal Cycler (Applied Biosystems, Foster City, CA, USA). The PCR products (amplicons) were purified using an Agencourt AMP XP PCR Purification Kit (Beckman Coulter, Brea, CA, USA) and quantified with a Qubit dsDNA HS Assay Kit (Life Technologies, Carlsbad, CA, USA) using a Qubit 2.0 Fluorometer (Life Technologies). Three amplicons were mixed in equimolar amounts, followed by simultaneous fragmentation and adaptor ligation using a Nextera XT Kit (Illumina, San Diego, CA, USA). The reaction product (library) was validated with a High Sensitivity D1000 ScreenTape (Agilent Technologies, Santa Clara, CA, USA) using an Agilent 2200 TapeStation and quantified using a Qubit dsDNA HS Assay Kit with a Qubit 2.0 Fluorometer to allow for library normalization. Sequencing was performed using a MiSeq Reagent Kit v3 (Illumina) and 150 cycles on a MiSeq sequencer using the “paired-end” sequencing run method. Sequence data analysis, mapping, and variant calling were streamlined using the MiSeq Reporter v2 (Illumina). The reads were aligned to the reference genome sequence of chromosome X (NC_000023.11) using algorithm bwa-0.6.1. Single-nucleotide polymorphism (SNP) and insertion/deletion (INDEL) identification were performed using the Genome Analysis Toolkit (GATK v1.6; Broad Institute, Cambridge, MA, USA). Visualization of the reads was performed using IGV_2.8.0 (Broad Institute, Cambridge, MA, USA) [26].

2.5. Urinary GAGs analysis

Urinary glycosaminoglycans (GAGs) were assayed at a contract lab (SRL, Inc., Tokyo, Japan) using Di Ferrante's method [27] and the carbazole‑sulfuric acid method [28] for uronic acid analysis, and using Hopwood's method [29] for high-resolution electrophoresis of GAGs.

2.5.1. Urinary uronic acid analysis

Urine samples (5 mL) were centrifuged at 3000 rpm for 15 min at 25 °C. The supernatant was mixed with 0.2 mL of 10% cetylpyridinium chloride (CPC) in H2O and incubated at 2–8 °C overnight. The precipitate was collected by centrifugation at 3000 rpm for 15 min at 0 °C, suspended in 5 mL of 1% potassium acetate in ethanol, and incubated at 2–8 °C for 2–3 h. The precipitate was collected again by centrifugation at 3000 rpm for 15 min at 0 °C, dried under a stream of dry nitrogen at 25 °C, and dissolved in 1 mL of water. The dissolved sample (0.1 mL) was mixed with 0.2 mL of 0.125% carbazole in methanol and 2 mL of ice-cold 0.95% sodium borate in concentrated sulfuric acid, heated for 10 min at 100 °C in an oil bath, and cooled to room temperature. The absorbance was measured at 530 nm. A negative control with water and standard, 25, 50 and 100 mg/L of glucuronoloactone were identically treated.

2.5.2. High-resolution electrophoresis of urinary GAGs

Urine samples (2–7 mL), equivalent to 35–100 μg uronic acid, were centrifuged at 3000 rpm for 15 min at 25 °C. The supernatant was mixed with an equal volume of 0.1% CPC in 0.2 M sodium citrate buffer (pH 4.8) and incubated for 30 min at 37 °C. The precipitate was collected by centrifugation at 3000 rpm for 15 min at 0 °C, suspended in 150 μL of 2 M lithium chloride, mixed with 800 μL of ethanol and incubated overnight at 2–8 °C. The precipitate was collected again by centrifugation at 10,000 rpm for 5 min at 0 °C, dried under a stream of dry nitrogen at 25 °C, dissolved in 20 μL of water containing 0.05% phenol red and vortexed vigorously. A part of the dissolved sample equivalent to 5–20 μg uronic acid was loaded at the origin to a cut piece of Titan III Zip Zone cellulose acetate plate (Helena Laboratories, Texas, USA). The sample underwent electrophoresis for 60 min at a constant voltage of 100 V at 15 °C with 1 M barium acetate buffer (pH 5.0), was stained with 0.25% aqueous Alcian blue solution for 15 min, destained in 0.18 M acetic acid, washed in deionized water, and dried at 25 °C. Each channel was scanned using transmission densitometry at 560 nm. The composition of GAGs, heparan sulfate (HS), chondroitin sulfate (CS), dermatan sulfate 1 (DS1), keratan sulfate and dermatan sulfate 2 were calculated automatically.

2.6. Ethics

This study was approved by the Ethics Committee of Kumamoto University (approval no. 1537). Written informed consent was obtained from the parents or legal guardians of newborns.

3. Results

3.1. NBS for MPS II

A flowchart and the results of NBS are shown in Fig. 1. In total, 197,700 newborns were screened for IDS activity using DBSs. The median IDS activity was 54.0 pmol/h/disk (interquartile range [IQR]: 45.4–64.0) using Method I, and 49.0 pmol/h/disk (IQR: 40.6–58.2) using Method II (Fig. 2). For Method I and the first 10 months of Method II, the cutoff level was set as 20% of median IDS activity in newborns, 10.0 pmol/h/disk. The recall rates using this cutoff level were almost 0.08% and 0.07%, respectively. From December 2019, the cutoff level was changed to 10% of the IQR, 5.0 pmol/h/disk, to reduce the recall rate, although the recall rate remained 0.08%.

Fig. 1.

Fig. 1

Flowchart of newborn screening for MPS II.

Fig. 2.

Fig. 2

Histograms of iduronate-2-sulfatase (IDS) activity in newborns. (A) Method I (Dec. 2016–Jan. 2019), N = 33,258, Median IDS activity: 54.0 pmol/h/disk (IQR, 45.4–64.0). (B) Method II (Feb. 2019–Jul. 2022), N = 164,250, Median IDS activity: 49.0 pmol/h/disk (IQR, 40.6–58.2). Dashed line: cutoff level.

In total, 157 newborns (0.08%) were recalled, requested to prepare DBS again and 122 showed impaired IDS activity in the second IDS activity measurement. All 122 newborns screened positive were male. These 122 newborns underwent physical examinations, biochemical tests, and imaging studies. Of these, 112 newborns continued to IDS gene analysis; ten newborns were dropout for IDS gene analysis due to lack of parental consent (Fig. 1). Urinary GAGs analysis was performed as an outpatient examination or after gene analysis. One newborn with a novel variant of c.1003C > A (p.His335Asn) was diagnosed as a patient with MPS II (Table 1). The frequency of patients with MPS II at the time of screening was 1 in 197,700.

Table 1.

Variants detected in the NBS program for MPS II.

No. Nucleic acid Amino acid Location ClinVar Polyphen-2 (Score) Allele Frequency
References
ToMMo# This study$
1 c.301C > T p.Arg101Cys Exon 3 Uncertain significance, benign, likely benign Probably damaging (1.000) NA 0.009 Keeratichamroen (2008), Chuang (2018), Chuang (2022)
2 c.418 + 442A > G Intron 3 NR 0.024521 0.009 This study
3 c.419-1079 T > C Intron 3 NR NR 0.018 This study
4 c.508-1294G > A Intron 4 NR 0.356770 0.509 This study
5 c.684A > G p.Pro228= Exon 5 Benign/likely benign 0.000348 0.455 Jia (2009), Lin (2020), Bilyen (2020), Chuang (2022)
6 c.708 + 203 T > G Intron 5 NR NR 0.009 This study
7 c.708 + 693C > T Intron 5 NR NA 0.009 This study
8 c.709-263G > A Intron 5 NR 0.000015 0.009 This study
9 c.791A > G p.Tyr264Cys Exon 6 NR Probably damaging (1.000) NR 0.018 This study
10 c.851C > T p.Pro284Leu Exon 6 Benign/likely benign Probably damaging (1.000) 0.000363 0.473 Jia (2009), Kosuga (2016), Chuang (2018), Bilyen (2020), Chuang (2022)
11 c.879 + 1725C > A Intron 6 NR 0.024551 0.009 This study
12 c.879 + 1802G > A Intron 6 NR 0.003915 0.455 This study
13 c.889C > T p.Arg297Cys Exon 7 Likely benign Probably damaging (1.000) 0.000030 0.118 This study
14 c.934G > A p.Gly312Ser Exon 7 Uncertain significance Probably damaging (1.000) NR 0.027 Trujillano (2017)
15 c.1003C > A p.His335Asn Exon 7 NR Probably damaging (1.000) NR 0.009 This study
16 c.1007-1315 T > C Intron 7 NR 0.006512 0.009 This study
17 c.1007-1182G > C Intron 7 NR NR 0.009 This study
18 c.1007-1169G > A Intron 7 NR 0.008062 0.009 This study
19 c.1007-1089C > T Intron 7 NR 0.036030 0.009 This study
20 c.1007-612_610delinsCAA Intron 7 NR NR 0.009 This study
21 c.1180 + 165A > G Intron 8 Benign 0.032835 0.009 This study
22 c.1180 + 184 T > C Intron 8 Benign 0.396196 0.518 Chuang (2018), Lin (2020), Chuang (2022)
23 c.1180 + 356C > T Intron 8 NR 0.000045 0.009 This study
24 c.1180 + 537delC Intron 8 NR NR 0.009 This study
25 c.1180 + 641G > A Intron 8 NR 0.363165 0.509 This study
26 c.1180 + 1404C > G Intron 8 NR 0.000227 0.009 This study
27 c.1180 + 1756G > A Intron 8 NR 0.024702 0.009 This study
28 c.1181–1353A > G Intron 8 NR 0.001209 0.455 This study
29 c.1181–1349 T > C Intron 8 NR 0.001164 0.455 This study
30 c.1181–1309C > T Intron 8 NR 0.007604 0.009 This study
31 c.1394A > G p.Gln465Arg Exon 9 NR Probably damaging (1.000) NR 0.009 This study
32 c.1478G > A p.Arg493His Exon 9 Likely pathogenic, uncertain significance Probably damaging (1.000) NR 0.009 Chuang (2018), Chuang (2022)
33 c.1499C > T p.Thr500Ile Exon 9 Benign Probably damaging (0.999) 0.000363 0.318 Chuang (2018), Lin (2020), Bilyen (2020), Chuang (2022)
34 c.*224del Exon 9 Benign NA 0.107668 0.009 This study
35 c.*1656A > C Exon 9 NR 0.036599 0.018 This study
36 c.*2110G > A Exon 9 NR 0.107560 0.018 This study
37 c.*3696C > T Exon 9 NR 0.071006 0.009 This study

#: Tohoku Medical Megabank (ToMMo 38KJPN-PAR2), $: allele number/110, NA: not available, NR: not registered.

3.2. IDS gene variants detected in this study

This study detected 37 variants of the IDS gene that led to lower IDS activity in DBSs (Table 1). Ten variants were exonic, 23 were intronic and the remaining 4 variants were in the 3′ non-coding region. Six of 10 exonic variants, c.301C > T (p.Arg101Cys) [18,30,31], c.684A > G (p.Pro228Pro) [15,23,31,32], c.851C > T (p.Pro284Leu) [18,23,[31], [32], [33]], c.934G > A (p.Gly312Ser) [34], c.1478G > A (p.Arg493His) [18,31], and c.1499C > T (p.Thr500Ile) [15,18,23,31], and one of 23 intronic variants, c.1180 + 184 T > C [15,18,31], have been previously reported as likely pathogenic, likely benign, benign, or uncertain significance. Three variants, c.889C > T (p.Arg297Cys), c.1180 + 165A > G, and c.*224del have been registered in ClinVar as likely benign or benign. The remaining 3 exonic variants, c.791A > G (p.Tyr264Cys), c.1003C > A (p.His335Asn), and c.1394A > G (p.Gln465Arg), were noted. These variants were not detected in the database of the healthy population, were predicted as “probably damaging” by the bioinformatic tool “Polyphen-2”, and were not registered in ClinVar. Interestingly, c.684A > G (p.Pro228Pro) always co-existed with c.851C > T (p.Pro284Leu) for the same allele (Supplemental Data 2). Table 2 shows the relationships between the variants and IDS activity in the DBSs. The median value of IDS activity in newborns with these variants was <2.0 pmol/h/disk. The median IDS activity in newborns with c.889C > T (p.Arg297Cys) or c.934G > A (p.Gly312Ser) was >2.0 pmol/h/disk and higher than that in newborns with other variants.

Table 2.

Relationships between variants and IDS activity in the DBSs

3.2.

IQR: interquartile range

IDS: pmol/h/disk

Gray: Patients with MPS II.

3.3. Urinary GAGs analysis

Fig. 3 shows urinary GAG analysis results for newborns with 10 exonic variants, including c.301C > T (p.Arg101Cys), c.684A > G (p.[Pro228=), c.791A > G (p.Tyr264Cys), c.851C > T(p.Pro284Leu), c.889C > T (p.Arg297Cys), c.934G > A (p.Gly312Ser), c.1003C > A (p.His335Asn), c.1394A > G (p.Gln465Arg), c.1478G > A (p.Arg493His), and c.1499C > T (p.Thr500Ile). The urinary uronic acid levels in newborns with c.1003C > A (p.His335Asn) exceeded the urinary uronic acid levels in the normal control newborns (N = 9, 43.3 ± 12.9 mg/g Cre) and were significantly higher than those in newborns with other variants (Fig. 3 and Supplemental Data 3).

Fig. 3.

Fig. 3

Relationships of urinary uronic acid levels and variants in newborns receiving IDS gene analysis.

The vertical whiskers represent 1.5 times the interquartile range. The gray zone is shown as mean value ± standard deviation of urinary uronic acid levels in normal newborn controls (N = 9, 43.3 ± 12.9 mg/g Cre) as indicated by the laboratory (SRL, Inc., Tokyo, Japan).

3.4. Patient with MPS II detected in this study

This screening program detected one newborn male with MPS II. The primary IDS activity in the patient was 1.3 pmol/h/disk, and secondary IDS activity was 0.1 pmol/h/disk (cutoff 10.0 pmol/h/disk). Outpatient physical examination did not show apparent abnormal findings, except for numerous extensive Mongolian spots on the trunk. IDS analysis revealed a novel variant, c.1003C > A (p.His335Asn). Urinary GAG analysis revealed a high uronic acid level (179 mg/g creatinine). Of these, the composition of DS1, HS and CS in urinary GAGs (36%, 9% and 38%, respectively) indicated a high dermatan sulfate fraction ratio in urinary GAGs (Supplemental Data 3). Based on these results, this patient was diagnosed with MPS II and subjected to ERT using idursulfase (Elaprase®, Takeda Pharmaceuticals Inc., Lexington, MA, USA) from 3 months after birth. His neurocognitive development should be closely monitored and he may require one of the approved therapies to prevent brain disorder progression.

4. Discussion

This study screened 197,700 newborns and identified one male newborn with MPS II. This frequency was similar to the frequency of MPS II of 1 in 263,158 live births based on a nationwide survey of patients with LSDs in Japan [35].

We previously reported the frequencies of Fabry disease (FD) [36] and Gaucher disease (GD) [37] in Japan based on NBS results. The frequencies of both these diseases were higher than those previously predicted. Although we expected a higher frequency of MPS II than that previously reported [35], the frequency was not significantly different. As patients with MPS II present with many characteristic findings and symptoms, including idiosyncratic facial features and joint contractures, compared to those with FD and GD, pediatricians may be able to diagnose MPS II.

There were differences in the frequency of MPS II in each area: one in 54,862 births in Taiwan [19], one in 73,290 births in Illinois [22], and one in 73,477 births in Missouri [23]. The frequency of MPS II in Japan may be higher than that indicated in this study (1/ 197,700) because this NBS could detect only one patient in a limited area, and this MPS II incidence rate was very low compared to those overseas; more NBS results in expanded areas in Japan should be accumulated.

All patients with MPS II detected by NBS were male; however, in the NBS performed in Missouri, a female newborn with heterozygous c.1499C > T and a female newborn with mildly elevated heparan sulfate levels in the DBS were detected [23]. MPS II has an X-linked inheritance, and it is suggested that heterozygous females also may develop MPS II [[38], [39], [40]].

In this study, 37 IDS gene variants were detected in 112 newborns undergoing genetic analysis: 10 exonic variants and 27 intronic variants. Four out of 10 exonic variants were novel, and only c.1003C > A was pathogenic. The most common exonic variants were c.[684A > G and 851C > T], which were identified in 45 patients. This variant is the most frequently detected NBS variant in Taiwan [15,19]. It has also been detected using NBS in Illinois [[20], [21], [22]] and Missouri [23]. Lin et al. followed carriers of this variant (up to 6 years of age) and reported that none of the patients developed MPS II [19]. The second most common exonic variant was c.1499C > T, which was detected in 38 newborns. This variant was also detected in Taiwan, Illinois, and Missouri [[19], [20], [21], [22], [23]]. Lin et al. demonstrated normal IDS activity in all the leukocytes of this variant carrier [19]. In this study, IDS activity in newborns with these 37 variants was as low as that in patients with MPS II. Therefore, clinicians needed to perform outpatient examinations, IDS gene analysis, and urinary GAG analysis to identify patients with MPS II. The combination of these clinical examinations may be a psychological and physical burden for newborns with suspected MPS II and their families. The measurement of GAGs using DBS as a 2nd tier test has been performed in Missouri since 2020, which has reduced the false-positive rate [23]. As there may be many false positives in Japan compared to Europe and the United States, the practical use of GAG measurements using DBS may be considered.

5. Conclusions

In this study, 197,700 newborns were screened and 122 showed decreased IDS activity in DBSs. One newborn with a novel variant of c.1003C > A (p.His335Asn) was diagnosed with MPS II using a combination of IDS genetic and urinary GAG analyses. The remaining 111 were considered false positives, and many novel variants were detected. As pseudodeficiency variants or VOUS are frequently detected in Japan, it is necessary to introduce GAG measurements in DBSs. This result was obtained in a limited area, and further expansion is needed to estimate the frequency of MPS II in Japan.

Funding

This study was supported in part by a Health and Labor Sciences Research Grant for Research on Rare and Intractable Diseases from the Ministry of Health, Labour and Welfare, Japan (grant number JPMH20FC1025); a Grant-in-Aid for Practical Research Project for Rare/Intractable Diseases from the Japan Agency for Medical Research and Development (AMED; grant numbers JP19ek0109276, JP20ek0109482); and a Grant-in-Aid for Scientific Research from the Ministry of Education, Culture, Sports, Science, and Technology, Japan (Japan Society for the Promotion of Science [JSPS] KAKENHI: grant number JP23K07294, JP23K07316, JP23K14954).

Author statement

YH, TS, JK, and KN designed the study. SY, SM, TS, and TI contributed to measurements and data collection. YH, TS, JK, KS, SY, TI, SM, SH, and KN checked and analyzed the data. YU, TS, JK, and KS wrote the manuscript. JK and KN supervised the study. All authors have read and approved the final manuscript for submission. All authors have agreed to be personally accountable for their contributions and to ensure that questions related to the accuracy or integrity of any part of the work, even those in which the author was not personally involved, were appropriately investigated and resolved, and the resolution documented in the literature.

Declaration of Competing Interest

The authors declare that they have no competing financial interests or personal relationships that may have influenced the work reported in this study.

Acknowledgments

We are grateful to Ms. Fumiko Nozaki, Ms. Naomi Yano, Ms. Ayuko Tateishi, and Ms. Hiroko Nasu for their technical support related to this study.

Footnotes

Appendix A

Supplementary data to this article can be found online at https://doi.org/10.1016/j.ymgmr.2023.101003.

Appendix A. Supplementary data

Supplementary material 1. Long-range PCR of IDS.

mmc1.pdf (76.5KB, pdf)

Supplementary material 2. Characteristics of positive-screened patients detected in the NBS program for MPS II.

mmc2.docx (101.6KB, docx)

Supplementary material 3. The histogram of urinary glycosaminoglycan analysis in newborns below the cutoff level in the IDS activity analysis is shown.

(A) Urinary uronic acid (mg/g creatinine)

Mean 62.8 ± 22.3, Median 59.1 [IQR: 50.7–71.3].

(B) The ratio of heparan sulfate to glycosaminoglycans in the urine (%)

Mean 5.4 ± 5.3, Median 4 [IQR: 3–6].

(C) The ratio of dermatan sulfate 1 to glycosaminoglycans in the urine (%)

Mean 11.6 ± 5.1, median 11 [IQR: 8–15].

(D) The ratio of chondroitin sulfate to glycosaminoglycans in the urine (%)

Mean 82.6 ± 7.8, median 85 [IQR: 79–87].

Black arrow: a newborn with c.1003C > A (p.His335Asn) variant in the IDS gene (a newborn with MPS II).

mmc3.pdf (225.6KB, pdf)

Data availability

Data will be made available on request.

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Supplementary material 1. Long-range PCR of IDS.

mmc1.pdf (76.5KB, pdf)

Supplementary material 2. Characteristics of positive-screened patients detected in the NBS program for MPS II.

mmc2.docx (101.6KB, docx)

Supplementary material 3. The histogram of urinary glycosaminoglycan analysis in newborns below the cutoff level in the IDS activity analysis is shown.

(A) Urinary uronic acid (mg/g creatinine)

Mean 62.8 ± 22.3, Median 59.1 [IQR: 50.7–71.3].

(B) The ratio of heparan sulfate to glycosaminoglycans in the urine (%)

Mean 5.4 ± 5.3, Median 4 [IQR: 3–6].

(C) The ratio of dermatan sulfate 1 to glycosaminoglycans in the urine (%)

Mean 11.6 ± 5.1, median 11 [IQR: 8–15].

(D) The ratio of chondroitin sulfate to glycosaminoglycans in the urine (%)

Mean 82.6 ± 7.8, median 85 [IQR: 79–87].

Black arrow: a newborn with c.1003C > A (p.His335Asn) variant in the IDS gene (a newborn with MPS II).

mmc3.pdf (225.6KB, pdf)

Data Availability Statement

Data will be made available on request.


Articles from Molecular Genetics and Metabolism Reports are provided here courtesy of Elsevier

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