Abstract

The phytochemical investigation of the whole plants of Coelogyne fuscescens Lindl. var. brunnea led to the discovery of three new phenolic glycosides, i.e., coelofusides A–C (1–3) and 12 known compounds (4–15). For the first time, we reported the nuclear magnetic resonance (NMR) data of 4-O-(6′-O-glucosyl-4″-hydroxybenzoyl)-4-hydroxybenzyl alcohol (4) in this study. The identification of the structures of newly discovered compounds was done through the analysis of their spectroscopic data [NMR, mass spectrometry, ultraviolet, Fourier transform infrared, optical rotation, and circular dichroism (CD)]. In comparison to anticancer drugs (i.e., etoposide and carboplatin), we evaluated anticancer potential of the isolated compounds on two different breast cancer cell lines, namely, T47D and MDA-MB-231. Human fibroblast HaCaT cells were used as the control cells. After a 48 h incubation, flavidin (8), coelonin (10), 3,4-dihydroxybenzaldehyde (11), and oxoflavidin (12) showed significant cytotoxic effects against breast cancer cells. Among them, oxoflavidin (12) exhibited the most potent cytotoxicity on MDA-MB-231 with an IC50 value of 26.26 ± 4.33 μM. In the nuclear staining assay, oxoflavidin induced apoptosis after 48 h in both T47D and MDA-MB-231 cells in a dose-dependent manner. Furthermore, oxoflavidin upregulated the expression of apoptotic genes, such as p53, Bax, poly(ADP-ribose) polymerase, caspase-3, and caspase-9 genes while significantly decreasing antiapoptotic protein (Bcl-2) expression levels.
Introduction
Cancer is a complex condition characterized by the abnormal and uncontrolled growth of cells, leading to the formation of a tumor or multiple tumors. Due to its diverse nature and ability to affect various organs and systems in the body, cancer has become a significant cause of mortality worldwide.1 Breast cancer stands as the most prevalent cancer in women and is ranked as the second leading cause of cancer-related death among women worldwide. In 2020, around 2.3 million new cases were reported, resulting in over 685,000 deaths. It is estimated that the number of new cases of breast cancer will exceed 3 millions with 1 million deaths by the year 2040.2 The mortality from breast cancer is exacerbated by the recurrence of the disease, and the disease often becomes resistant to chemotherapy. Thus, there is a pressing need for novel therapeutic drugs for breast cancer. Many anticancer drugs used in clinical settings are derived from natural sources. For instance, vincristine and vinblastine (vinca alkaloids) come from Catharanthus roseus L. and paclitaxel (taxane) is derived from Taxus brevifolia Nutt. These plant-derived anticancer agents have received clinical approval and are now widely used in cancer treatment.3
The Orchidaceae family is renowned in traditional medicine, particularly in treating infections and tumors.4 However, despite their traditional medicinal uses, there is limited information about their specific chemical composition. Thus, further exploration and investigation of orchids are warranted for the identification of bioactive compounds present in these plants and to assess their potential as sources of novel anticancer agents.4,5 In line with our ongoing research on anticancer compounds from orchids,6,7 we turned our focus on the Coelogyne fuscescens Lindl. var. brunnea plant.
C. fuscescens Lindl. var. brunnea, belonging to the Orchidaceae family, is recognized as one of the medicinal orchid species with aphrodisiac properties and it is referred to as “Ueang Tian Som” in Thai.8 Apart from its medicinal benefits, it is also one of the important ornamental species due to its beautiful flowers and distinctive coconut fragrance.9C. fuscescens Lindl. var.brunnea possesses a significant value in both horticulture and medicine. Its leaves and pseudobulbs are often applied for therapeutic purposes.10 The pseudobulb is recognized for various medicinal properties, such as alleviating headaches, fever, abdominal pain, and ear infections. A paste derived from the pseudobulb is also topically used to relieve burned skin.9,11 These traditional applications highlight the therapeutic potential of this plant. However, there is lacking prior information regarding the chemical constituents and a precise evaluation of its therapeutic potential. Our research aims to fill the knowledge gap by uncovering potential bioactive compounds and offering insights into the plant’s medicinal properties.
In this study, an ethanolic extract of C. fuscescens Lindl. var.brunnea was fractionated by partitioning between solvents to yield ethyl acetate and aqueous extracts. Both extracts exhibited a notable cytotoxic effect against various cell types and a particular impact on human breast cancer cells, which prompted us to further investigate the specific compounds accountable for the observed cytotoxic activity against breast cancer cells.
Results and Discussion
Structure Elucidation of Isolated Compounds
Isolation of the ethanol (EtOH) extract of C. fuscescens Lindl. var.brunnea yielded 15 compounds. Among them, three compounds, coelofusides A–C (1–3), were elucidated as new compounds and 4-O-(6′-O-glucosyl-4″-hydroxybenzoyl)-4-hydroxybenzyl alcohol (4) was first reported through nuclear magnetic resonance (NMR) analysis. Additionally, 11 known compounds were characterized: cyclopholidonol (5),12 phoyunbene C (6),13 cinnamic acid (7),14 flavidin (8),15p-hydroxybenzoic acid (9),16 coelonin (10),17 3,4-dihydroxybenzaldehyde (11),18 oxoflavidin (12),19 4-β-d-glucopyranosyloxybenzyl ester (13),20 kaempferol-3-O-β-d-glucopyranoside (14),21 and loroglossin (15)22 (Figure 1) (Figures S38–S75).
Figure 1.
Structures of compounds 1–15 obtained from C. fuscescens Lindl. var. brunnea.
Compound 1 was isolated as a white, amorphous solid. In high-resolution electrospray ionization-mass spectrometry (HR-ESI-MS), it exhibited a [M – H]− ion peak at m/z: 525.1397 (calcd for C27H25O11, 525.1396) (Figure S1). Compound 1 displayed ultraviolet (UV) absorptions at 210 and 255 nm (Figure S2). The Fourier transform infrared (FT-IR) spectrum showed characteristic absorption bands at 2921 and 1607 cm–1 (aromatic ring), 1712 cm–1 (C=O), 1513 cm–1 (C=C), and 1279 cm–1 (C–O) due to the ester carbonyl moiety in addition to strong bands at 3370 cm–1 (OH) and 1072 cm–1 (C–O), indicating the presence of the sugar moiety22 (Figure S3). The existence of the sugar moiety is also evident in the 1H NMR (400 MHz) spectra of compound 1 (Table 1). The anomeric sugar proton appeared as a doublet at 5.06 (1H, d, J = 7.6 Hz, H-1), indicating the β-configuration of the glucosyl residue,22 and the other signals of sugar protons exhibited in the range of 3.53–4.73 Hz. The 13C NMR signals (Table 1) were observed for a glucose unit at 100.9 (C-1), 73.8 (C-2), 77.1 (C-3), 70.6 (C-4), 74.3 (C-5), and 63.7 (C-6).12 The 1H–1H correlation spectroscopy (COSY) spectrum was examined to determine the proton sequence of the initial sugar unit spanning from H-1 to H-6. The 1H NMR spectrum of compound 1 also revealed six pairs of aromatic signals at δH 7.37 (2H, d, J = 8.8 Hz, H-2′,6′), 7.12 (2H, d, J = 8.8 Hz, H-3′,5′), 7.95 (2H, d, J = 8.8 Hz, H-2″,6″), 6.97 (2H, d, J = 8.8, H-3″,5″), 7.90 (2H, d, J = 8.8 Hz, H-2‴,6‴), and 6.92 (2H, d, J = 8.8 Hz, H-3‴,5‴), demonstrating three 1, 4-disubstituted aromatic rings of two 4-hydroxybenzoic acid moieties16 and a 4-hydroxybenzyl alcohol group.20 The ester linkage between 4-hydroxybenzoic acid and 4-hydroxybenzyl alcohol was confirmed through a heteronuclear multiple bond correlation (HMBC) cross-peak observed between the methylene protons of the benzyl alcohol moiety δH 5.25 (2H, s, H-7′) and the carbonyl group δC 165.6 (C-7‴), forming a (4-hydroxyphenyl)methyl 4-hydroxybenzoate structure. The HMBC cross-peaks from the anomeric proton of the glucose moiety at δH 5.06 (1H, d, J = 7.6 Hz, H-1) to C-4′ of the benzyl alcohol moiety (δC 157.7) suggested the connection of the (4-hydroxyphenyl)methyl 4-hydroxybenzoate unit at C-1 of glucose. This confirmation was supported by the nuclear overhauser enhancement spectroscopy (NOESY) interactions between the anomeric proton of the glucose moiety and the H-3′/H-5′ protons of the benzyl alcohol unit. The second unit of 4-hydroxybenzoic acid was attached at C-6 of glucose via an ester bond, as evidenced by HMBC correlations of H-6 [δH 4.35 (1H, dd, J = 11.6, 7.2 Hz) and 4.73 (1H, dd, J = 11.6, 2.0 Hz)] and C-7″ (δC 165.5) of the benzoyl carbonyl group (Figure 2). Based on the aforementioned data, the structure of compound 1 was demonstrated as shown and given the trivial name coelofuside A (Figures S4–S9).
Table 1. 1H (400 MHz) and 13C NMR (100 MHz) Spectral Data of 1, 2, and 4 in Acetone-d6.
| position |
1 |
2 |
4 |
|||
|---|---|---|---|---|---|---|
| 1H (multiplicity, J in Hz) | 13C, type | 1H (multiplicity, J in Hz) | 13C, type | 1H (multiplicity, J in Hz) | 13C, type | |
| 1 | 5.06 (d, 7.6) | 100.9, CH | 5.18 (d, 7.6) | 100.2, CH | 5.01 (d, 7.6) | 101.0, CH |
| 2 | 3.57 (m) | 73.8, CH | 3.56 (m) | 73.7, CH | 3.55 (m) | 73.8, CH |
| 3 | 3.60 (m) | 77.1, CH | 3.60 (m) | 77.0, CH | 3.60 (m) | 77.1, CH |
| 4 | 3.53 (m) | 70.6, CH | 3.55 (m) | 70.6, CH | 3.53 (m) | 70.7, CH |
| 5 | 3.91 (ddd, 11.6, 9.6, 2.0) | 74.3, CH | 3.96 (ddd, 9.6, 7.6, 2.0) | 74.4, CH | 3.89 (ddd, 9.6, 7.6, 2.0) | 74.2, CH |
| 6 | 4.73 (dd, 11.6, 2.0) | 63.7, CH2 | 4.73 (dd, 11.6, 2.0) | 63.7, CH2 | 4.74 (dd, 11.6, 2.0) | 63.8, CH2 |
| 4.35 (dd, 11.6, 7.2) | 4.35 (dd, 11.6, 7.6) | 4.33 (dd, 11.6, 7.6) | ||||
| 1′ | 130.4, C | 123.8, C | 136.2, C | |||
| 2′ | 7.37 (d, 8.8) | 129.6, CH | 7.88 (d, 8.8) | 131.1, CH | 7.23 (d, 8.8) | 127.7, CH |
| 3′ | 7.12 (d, 8.8) | 116.5, CH | 7.16 (d, 8.8) | 116.0, CH | 7.06 (d, 8.8) | 116.2, CH |
| 4′ | 157.7, C | 161.3, C | 156.8, C | |||
| 5′ | 7.12 (d, 8.8) | 116.5, CH | 7.16 (d, 8.8) | 116.0, CH | 7.06 (d, 8.8) | 116.2, CH |
| 6′ | 7.37 (d, 8.8) | 129.6, CH | 7.88 (d, 8.8) | 131.1, CH | 7.23 (d, 8.8) | 127.7, CH |
| 7′ | 5.25 (s) | 65.5, CH2 | 165.9, C | 4.56 (s) | 63.4, CH2 | |
| MeO-7′ | 3.86 (s) | 51.2, OCH3 | ||||
| 1″ | 121.5, C | 121.5, C | 121.6, C | |||
| 2″ | 7.95 (d, 8.8) | 131.7, CH | 7.95 (d, 8.8) | 131.7, CH | 7.95 (d, 8.8) | 131.7, CH |
| 3″ | 6.97 (d, 8.8) | 115.2, CH | 6.96 (d, 8.8) | 115.2, CH | 6.96 (d, 8.8) | 115.2, CH |
| 4″ | 162.0, C | 161.9, C | 161.9, C | |||
| 5″ | 6.97 (d, 8.8) | 115.2, CH | 6.96 (d, 8.8) | 115.2, CH | 6.96 (d, 8.8) | 115.2, CH |
| 6″ | 7.95 (d, 8.8) | 131.7, CH | 7.95 (d, 8.8) | 131.7, CH | 7.95 (d, 8.8) | 131.7, CH |
| 7″ | 165.5, C | 165.4, C | 165.5, C | |||
| 1‴ | 121.5, C | |||||
| 2‴ | 7.90 (d, 8.8) | 131.6, CH | ||||
| 3‴ | 6.92 (d, 8.8) | 115.2, CH | ||||
| 4‴ | 161.9, C | |||||
| 5‴ | 6.92 (d, 8.8) | 115.2, CH | ||||
| 6‴ | 7.90 (d, 8.8) | 131.6, CH | ||||
| 7‴ | 165.6, C | |||||
Figure 2.
HMBC correlations of 1, 2, 3, and 4.
Compound 2 was isolated as a white, amorphous solid. In HR-ESI-MS, it revealed a [M – H]− ion peak at m/z: 433.1121 (calcd for C21H21O10, 433.1134) (Figure S11). The FT-IR spectrum showed characteristic absorption bands at 2919 and 1610 cm–1 (aromatic ring), 1700 cm–1 (C=O), 1512 cm–1 (C=C), and 1286 cm–1 (C–O) due to ester carbonyl group in addition to strong bands at 3353 cm–1 (OH) and 1065 cm–1 (C–O), indicating the presence of the sugar moiety22 (Figure S12). The compound revealed UV absorptions at 210 and 250 nm (Figure S13). The 1H NMR spectrum of compound 2 showed four pairs of aromatic signals at δH 7.88 (2H, d, J = 8.8 Hz, H-2′,6′), 7.16 (2H, d, J = 8.8 Hz, H-3′,5′), 7.95 (2H, d, J = 8.8 Hz, H-2″,6″), and 6.96 (2H, d, J = 8.8 Hz, H-3″,5″), which demonstrated two 1, 4-disubstituted aromatic rings (Table 1). Its 1H NMR spectrum also exhibited one methoxyl group at δH 3.86 (3H, s) along with the observation of a methyl ester carbon signals at δC 165.9 (C-7′) and 51.2 (7′-OMe), indicating the existence of a 4-hydroxy methyl benzoate moiety in compound 2. Furthermore, the 1H and 13C NMR data of another 1, 4-disubstituted aromatic ring were consistent with those of 4-hydroxybenzoic acid.16 The 1H NMR of compound 2 also showed signals of the glucose moiety (δ 5.18-3.55) with a β-anomeric proton at 5.18 (1H, d, J = 7.6 Hz, H-1).22 In the 13C NMR spectrum of compound 2, a glucosyl unit was observed at δC 100.2 (C-1), 73.7 (C-2), 77.0 (C-3), 70.6 (C-4), 74.4 (C-5), and 63.7 (C-6).12 The HMBC correlations between the anomeric proton signal at δH 5.18 (1H, d, J = 7.6 Hz, H-1) with δC 161.3 (C-4′) supported the linkage of the glucose unit and 4-hydroxy methyl benzoate moiety at C-1 and C-4′ by an ether linkage. Similar to compound 1, 4-hydroxybenzoic acid of compound 2 was positioned at C-6 of the glucose unit, as supported by HMBC correlations of H-6 [δH 4.35 (1H, dd, J = 11.6, 7.6 Hz) and 4.73 (1H, dd, J = 11.6, 2.0 Hz)] and C-7″ (δC 165.4) (Figure 2). Considering the above spectral data, the structure of compound 2 was illustrated as shown and has been named coelofuside B (Figures S14–S18).
Compound 3 was obtained as a white, amorphous solid. In HR-ESI-MS, it revealed a [M – H]− ion peak at m/z: 1033.3543 (calcd for C49H61O24, 1033.3552) (Figure S20). The FT-IR spectrum exhibited absorption bands at 2925 and 1611 cm–1 (aromatic ring), 1727 cm–1 (C=O), 1512 cm–1 (C=C), and 1230 cm–1 (C–O) due to ester carbonyl group, gem-dimethyl groups (1386 and 1369 cm–1), and strong broadened absorption band at 3382 cm–1 (OH) and 1074 cm–1 (C–O), indicating the presence of sugar moieties22,23 (Figure S21). Furthermore, compound 3 exhibited UV absorptions of 220, 230, and 275 nm (Figure S22). The 1H, 13C, and DEPT spectral data (Table 2) of compound 3 exhibited similarities to those of gymnoside IV from Gymnadenia conopsea except that the 1H and 13C NMR data assignable at δH 4.52 (1H, s, H-3), δC 74.6 (C-3), and δC 84.7 (C-2) in compound 3 were shifted downfield compared to that of gymnoside IV [δH 3.30 (1H, d, J = 17.7 Hz, H-3a), 3.46 (1H, d, J = 17.7 Hz, H-3b), δC 42.7 (C-3), and δC 80.9 (C-2)].23 These differences indicated the presence of the 2-isobutyltartrate moiety in compound 3 as opposed to the 2-isobutylmalate moiety in gymnoside IV.24
Table 2. 1H (400 MHz) and 13C NMR (100 MHz) Spectral Data of 3 in Methanol-d4.
| position | 1H (multiplicity, J in Hz) | 13C, type |
|---|---|---|
| 1 | 172.1, C | |
| 2 | 84.7, C | |
| 3 | 4.52 (s) | 74.6, CH |
| 4 | 170.7, C | |
| 5 | 2.14 (dd, 13.9, 5.5) | 45.4, CH2 |
| 1.73 (m) | ||
| 6 | 1.77 (m) | 23.5, CH |
| 7 | 0.78 (d, 6.8) | 22.7, CH3 |
| 8 | 0.93 (d, 6.8) | 23.3, CH3 |
| 1′ | 129.0, C | |
| 2′, 6′ | 7.33 (d, 8.8) | 130.5, CH |
| 3′, 5′ | 7.14 (d, 8.8) | 116.5, CH |
| 4′ | 158.2, C | |
| 7′ | 5.10 (d, 10.0) | 67.0, CH2 |
| 4.90 (d, 10.0) | ||
| 1″ | 128.9, C | |
| 2″, 6″ | 7.30 (d, 8.8) | 130.2, CH |
| 3″, 5″ | 7.11 (d, 8.8) | 116.5, CH |
| 4″ | 158.0, C | |
| 7″ | 5.13 (d, 10.0) | 67.0, CH2 |
| 4.96 (d, 10.0) | ||
| 2-O-Glc-1 | 4.92 (d, 8.0) | 98.0, CH |
| 2 | 3.45 (m) | 72.5, CH |
| 3 | 5.00 (dd, 9.6, 9.6) | 78.0, CH |
| 4 | 3.64 (dd, 9.6, 9.6) | 66.9, CH |
| 5 | 2.77 (dt, 9.6, 2.6) | 75.6, CH |
| 6 | 3.67 (2H, m) | 59.7, CH2 |
| Cin.-1 | 134.5, C | |
| Cin.-2,6 | 7.65 (dd, 7.6, 2.0) | 127.9, CH |
| Cin.-3,5 | 7.43 (m) | 128.6, CH |
| Cin.-4 | 7.43 (m) | 130.2, CH |
| Cin.-7 | 7.80 (d, 16.0) | 145.1, CH |
| Cin.-8 | 6.63 (d, 16.0) | 117.8, CH |
| Cin.-9 | 167.0, C | |
| 4′-O-Glc-1 | 4.89 (d, 7.7) | 100.9, CH |
| 2 | 3.47 (m) | 73.5, CH |
| 3 | 3.56 (m) | 76.5, CH |
| 4 | 3.41 (m) | 69.9, CH |
| 5 | 3.46 (m) | 76.7, CH |
| 6 | 3.91 (dd, 12.0, 2.4) | 61.1, CH2 |
| 3.72 (m) | ||
| 4″-O-Glc-1 | 5.02 (d, 7.7) | 100.6, CH |
| 2 | 3.48 (m) | 73.5, CH |
| 3 | 3.57 (m) | 76.5, CH |
| 4 | 3.41 (m) | 69.9, CH |
| 5 | 3.46 (m) | 76.7, CH |
| 6 | 3.91 (dd, 12.0, 2.4) | 61.1, CH2 |
| 3.72 (m) |
The 1H NMR spectrum of compound 3 clearly displayed four pairs of overlapped signals at δH 7.33 (2H, d, J = 8.8 Hz, H-2′, 6′), δH 7.30 (2H, d, J = 8.8 Hz, H-2″,6″), 7.14 (2H, d, J = 8.8 Hz, H-3′, 5′), and 7.11 (2H, d, J = 8.8 Hz, H-3″, 5″) and four benzyloxy hydrogens at δH 5.10 (1H, d, J = 10.0 Hz, H-7′a), 4.90 (1H, d, J = 10.0 Hz, H-7′b), 5.13 (1H, d, J = 10.0 Hz, H-7″a), and 4.96 (1H, d, J = 10.0 Hz, H-7″b). The HMBC correlations from H2-7′ to C-1′ (δC 129.0) and C-2′/6′ (δC 130.5) and from H2-7″ to C-1″ (δC 128.9) and C-2″/6″ (δC 130.2) revealed the existence of two 1,4-disubstituted benzylic units in compound 3. The three anomeric protons at δH 4.92 (1H, d, J = 8.0 Hz, 2-O-Glc-1), 4.89 (1H, d, J = 7.7 Hz, 4′-O-Glc-1), and 5.02 (1H, d, J = 7.7 Hz, 4″-O-Glc-1) and the signals between δH 2.77 and 5.00 indicated the presence of three glucosyl units.25 The coupling constants between those anomeric protons in the sugar moieties (7.7 and 8.0 Hz) suggest that they all adopt β-configurations.22 The HMBC correlations from the 4′-O-Glc-1 proton to C-4′ (δC 158.2) and from the 4″-O-Glc-1 proton to C-4″ (δC 158.0), together with NOESY correlations between the 4′-O-Glc-1 proton and H-3′(H-5′) and between the 4″-O-Glc-1 proton and H-3″ (H-5″) indicated the presence of two 4-(β-d-glucopyranosyloxy)benzyl units.25 The linkage of those two 4-(β-d-glucopyranosyloxy)benzyl units was deduced from the HMBC correlations of H2-7′ and C-1 (δC 172.1) and between H2-7″ and C-4 (δC 170.7).
The overlapped signals of another aromatic ring were also observed at δH 7.65 (2H, dd, J = 7.6, 2.0 Hz, Cin-H-2,6) and 7.43 (3H, m, Cin-H-3,4,5), together with δH 7.80 (1H, d, J = 16.0 Hz, Cin-H-7) and 6.63 (1H, d, J = 16.0 Hz, Cin-H-8). The linkage between the aromatic ring and the double bond was discerned through the HMBC correlations of the Cin-7 proton to Cin-2 and Cin-6 carbons (δC 127.9); the Cin-8 proton to the Cin-1 carbon (δC 134.5); and Cin-2 and Cin-6 protons to the Cin-7 carbon (δC 145.1) (Figure 2). Additionally, the existence of the carbonyl carbon at Cin-9 (δC 167.0) revealed the presence of a (E)-cinnamoyl group in compound 3.25 The 2-O-Glc-3 proton at δH 5.00 (1H, dd, J = 9.6, 9.6 Hz) showed HMBC correlations to the Cin-9 carbon (δC 167.0), thus delineating the position of the (E) cinnamoyloxy group at the 2-O-Glc-3 carbon. Finally, the HMBC correlation from the 2-O-Glc-1 proton to C-2 revealed that the anomeric proton of the 2-O-glucose moiety is connected to a 2-isobutyltartrate unit at C-2. NMR spectral data of compound 3 was similar to those of loroglossin (15) obtained from this plant, only differing in extra functional groups at C-2 in compound 3. Both compounds exhibited similar circular dichroism (CD) properties, demonstrating a positive cotton effect at 200–219 nm and a negative cotton effect at 220–230 nm (Figure 3). The configuration at C-2 and C-3 of the 2-isobutyltartrate structure was characterized as 2R and 3S by comparing its specific rotation, CD spectra, and NMR data with loroglossin (15)22 (Figures S23–S27). Loroglossin is the most commonly known orchid glucoside isolated from several orchid species such as Orchis latifolia Linn., Dactylorhiza hatagirea D. Don., and Habenaria petalodes Lindl.22,26,27 Therefore, it was concluded that compound 3 had a structure as established, and the trivial name coelofuside C was given to the compound.
Figure 3.

CD spectra of compounds 3 and 15.
Compound 4 was isolated as a white, amorphous solid. In HR-ESI-MS, it revealed a [M – H]− ion peak at m/z: 405.1176 (calcd for C20H21O9, 405.1185) (Figure S28). The FT-IR spectrum displayed characteristic absorption bands at 2919 and 1608 cm–1 (aromatic ring), 1513 (C=C), 1700 cm–1 (C=O), and 1284 cm–1 (C–O) due to ester carbonyl functions in addition to strong absorption bands at 3347 cm–1 (OH) and 1071 (C–O) cm–1, indicating the presence of the sugar moiety22 (Figure S29). In the UV spectrum of compound 4, absorptions were comparable to those of compounds 1 and 2 exhibiting the UV absorptions at 210, 230, 260, and 314 nm (Figure S30). From the 1H NMR (400 MHz) spectra of compound 3, the anomeric sugar proton appeared at δH 5.01 (1H, d, J = 7.6 Hz, H-1) and other signals of sugar protons around 3.53–4.74 ppm (Table 1). Other substituents included a 4-hydroxybenzyl alcohol group [δH 7.06 (2H, d, J = 8.8 Hz, H-3′, H-5′), 7.23 (2H, d, J = 8.8 Hz, H-2′, H-6′), and 4.56 (2H, s, H-7′)] and a 4-hydroxybenzoic acid group [δH 7.95 (2H, d, J = 8.8 Hz, H-2″, H-6″) and 6.96 (2H, d, J = 8.8 Hz, H-3″, H-5″)]. HMBC correlations were observed between the H-1 of glucose and the C-4′ of the 4-hydroxybenzyl alcohol residue which revealed that the glucosidic bond is between C-4′ and C-1. The HMBC correlations were also observed between the benzoyl carbonyl group (δC 165.5) and the methylene protons (H-6) of the glucose residue [δH 4.33 (1H, dd, J = 11.6, 7.6 Hz) and 4.74 (1H, dd, J = 11.6, 2.0 Hz)] (Figure 2). Based on the provided spectral data, compound 4 was identified as 4-O-(6′-O-glucosyl-4″-hydroxybenzoyl)-4-hydroxybenzyl alcohol. Compound 4 was previously reported from Lagenaria siceraria Stand (bottle gourd) fruit using liquid chromatography–tandem mass spectrometry without NMR data.28 Therefore, this is the first report of NMR data on this compound (Figures S31–S36).
Cytotoxicity of Ethyl Acetate and Aqueous Extracts of C. fuscescens Lindl. var. brunnea on Prostate Cancer (PC3), Breast Cancer (T47D and MDA-MB-231), Cervical Cancer (SIHA), Colon Cancer (SW620), and Human Fibroblast (HaCaT) Cells
Six different concentrations (0–500 μg/mL) of ethyl acetate and the aqueous extracts of C. fuscescens Lindl. var. brunnea were screened for cytotoxicity against prostate cancer (PC3), breast cancer (T47D and MDA-MB-231), cervical cancer (SIHA), colon cancer (SW620), and human fibroblast (HaCaT) cells. Both extracts demonstrated notable cytotoxic effects against various cancer cell lines at concentrations of 125, 250, and 500 μg/mL, with cell viability ranging from 10 to 80%. For the breast cancer cells (T47D and MDA-MB-231), both ethyl acetate and aqueous extracts reduced cell viability (≤50%) at 125 μg/mL. The IC50 values for both extracts against breast cancer cells are detailed in Table 3. In this study, dimethylsulfoxide (DMSO) was employed as a negative control to demonstrate that DMSO alone did not influence cell viability compared with the untreated controls (Figure 4).
Table 3. IC50 Values of the Aqueous and Ethyl Acetate Extracts of C. fuscescens Lindl. brunnea against the T47D and MDA-MB-231 Breast Cancer Cell Lines and the HaCaT Human Keratinocyte Cell Line.
| cytotoxicity IC50 ± SD (μg/mL) |
|||
|---|---|---|---|
| extracts | T47D | MDA-MB-231 | HaCaT |
| aqueous extract | 138.30 ± 3.15 | 96.62 ± 5.48 | 106.30 ± 8.41 |
| ethyl acetate extract | 125.80 ± 9.41 | 116.90 ± 6.95 | 74.78 ± 6.37 |
Figure 4.
Cytotoxicity effects of the aqueous (A–C) and ethyl acetate extracts (D–F) of C. fuscescens Lindl. var. brunnea on the T47D and MDA-MB-231 breast cancer cell lines and on the HaCaT human keratinocyte cell line.
Cytotoxicity of Isolated Compounds from C. fuscescens Lindl. var. brunnea on Breast Cancer Cells
Two breast cancer cell lines, T47D and MDA-MB-231, were chosen for further evaluation due to their superior cytotoxic effects over other cell lines. In this study, the cytotoxic effects of isolated compounds (1 and 3–15) were tested at six different concentrations (0–200 μM) (Figure 5). Compound 2 was excluded from evaluation due to its limited quantity. Carboplatin and etoposide, known chemotherapeutic drugs for breast cancer, were employed as positive controls. Carboplatin, a platinum analogue with single-agent activity, is used to treat advanced-stage breast cancer.29 Previous research has indicated that oral etoposide is a reliable and secure choice for pretreated metastatic breast cancer patients.30 Notably, compounds 8, 10, 11, and 12 revealed significant cytotoxic effects against breast cancer cells, outperforming both etoposide and carboplatin. Compound 8 had IC50 values for T47D and MDA-MB-231 at 111.40 ± 7.31 and 48.61 ± 2.16 μM, respectively (Table S1). Additionally, Compound 8 demonstrated greater selectivity toward breast cancer cells over human fibroblasts compared to etoposide, as supported by the IC50 values of compound 8 at 58.76 ± 2.89 μM and etoposide at 4.86 ± 0.35 μM. Compound 10 exhibited significant cytotoxicity on T47D and MDA-MB-231 with IC50 values of 44.43 ± 2.7 and 63.82 ± 10.31 μM, respectively, while IC50 values of the cytotoxic effect on human fibroblasts were 114.5 ± 7.65 μM. The IC50 values of compound 11 on T47D, MDA-MB-231, and HaCaT were 67.72 ± 5.9, 67.15 ± 5.72, and 115.19 ± 7.69 μM, respectively. Although compound 11 (3,4-dihydroxy benzaldehyde) has been previously investigated for its cytotoxic effects on MCF-7 and MDA-MB-231 breast cancer cells, 0–100 μM did not show an anticancer effect.31 Compound 12 exhibited IC50 values of 69.02 ± 7.23 and 26.26 ± 4.33 μM on T47D and MDA-MB-231, respectively, surpassing the effects of both etoposide and carboplatin. Compound 12 showed a more potent cytotoxic effect on MDA-MB-231 than all test compounds, etoposide and carboplatin. Moreover, compound 12 was less toxic to human fibroblasts with an IC50 value of 113.38 ± 6.31 μM compared to etoposide. The cytotoxicity results of etoposide indicated that it was particularly harmful to human fibroblasts, which are considered as normal human cells, while carboplatin showed a lesser cytotoxic effect on breast cancer cells. Taken together, compounds 8, 10, 11, and 12 revealed superior cytotoxic effects on breast cancer cells compared to carboplatin and less cytotoxicity on human fibroblasts than etoposide.
Figure 5.
Cytotoxicity effects of compounds 8 (A), 10 (B), 11 (C), 12 (D), carboplatin (E), and etoposide (F) against the T47D and MDA-MB-231 breast cancer cell lines and the HaCaT human keratinocyte cell line.
Oxoflavidin Induces Apoptosis in Breast Cancer Cells
Among the test compounds, compound 12 (oxoflavidin) significantly showed a cytotoxic effect on breast cancer cells especially on MDA-MB-231 with an IC50 value (26.26 ± 4.33 μM). Moreover, compound 12 has not been previously reported for its anticancer effect on breast cancer cells. Therefore, compound 12 was selected for further investigation of its basic mechanism. Antiproliferative effects of compound 12 showed the highest efficacy in inhibiting cell survival in breast cancer T47D and MDA-MB-231 cell lines. The cytotoxic assay revealed that compound 12 inhibited proliferation in a dose-dependent manner after being treated for 48 h and induced growth inhibition through apoptosis. Compound 12 induced apoptosis in both T47D and MDA-MB-231 cells, as determined by Hoechst/propidium iodide (PI) staining in a dose-dependent manner. It was found that compound 12 stimulated apoptosis and cell death. The cell morphology was observed using a fluorescent microscope. There was shrinkage of an aneurysmal cell wall and a breakdown of DNA, while a concentration of 200 μM induced apoptosis together with necrosis (Figure 6).
Figure 6.
Treatment with compound 12 for 48 h cause apoptosis in both T47D (A) and MDA-MB-231(B) cells in a dose-dependent manner detected via Hoechst33342/PI staining and the percentages of apoptotic and necrotic cell death in T47D (C) and MDA-MB-231 (D) were calculated. Data is represented as the mean ± SD (n = 3) shown in common superscript as *p ≤ 0.05, **p ≤ 0.01, and ***p ≤ 0.001.
Further studies were conducted at the relevant molecular level. Quantitative real-time polymerase chain reaction (qRT-PCR) analysis was employed to determine the impact of compound 12 on the expression of the Bcl-2 gene in human breast cancer cells. MDA-MB-231 cells were treated with compound 12 at 0–25 μM (IC50). The results showed that there was a decrease in Bcl-2 gene expression significantly compared to control cells that were not treated. It was also found that the expression of p53, Bax, poly(ADP-ribose) polymerase (PARP), caspase-3, and caspase-9 genes was markedly elevated in MDA-MB-231 cells following treatment with compound 12 (Figure 7).
Figure 7.
Investigation of the expression levels of genes related to the apoptotic pathway. p53 (A), caspase-3 (B), caspase-9 (C), Bcl-2 (D), Bax (E), and PARP (F) of compound 12-treated MDA-MB-231 cells by quantitative RT-PCR after 48 h. Data is represented as the mean ± SD (n = 3) shown in common superscript as *p ≤ 0.05, **p ≤ 0.01, ***p ≤ 0.001.
The tumor suppressor gene p53 performs a crucial role in different forms of cell death. p53 can selectively trigger apoptosis in tumor cells while causing temporary halting of the cell cycle in normal cells.32 PARP is among the initial cellular proteins identified as a caspase substrate. It undergoes cleavage during the posterior stages of apoptosis and is a focus of numerous chemotherapeutic drugs due to its role as a crucial death substrate.33 The activation of caspase-3 is pivotal in the apoptotic machinery, serving as a key marker for apoptosis induced by different mechanisms. Previous result demonstrated that apoptosis was triggered in MCF-7 human breast cancer cells via increasing caspase (−3 and −9) activity.34 Caspase-9 is triggered early in the apoptotic process, prompted by the liberation of cytochrome c from the mitochondria in reaction with apoptotic signals. Once activated, caspase-9 initiates the proteolytic activity of subsequent stages of caspases, including caspase-3. The initiation of caspase-3 leads to the fragmentation of crucial cellular components, such as PARP.35 The expression level of Bax is also a crucial indicator for detecting apoptotic cell death. Certainly, the mechanism of apoptosis hinges significantly on the pro-apoptotic (Bax) and antiapoptotic (Bcl-2) proteins.36
In our study, increasing levels of p53, caspase-3, caspase-9, Bax, and PARP while diminishing levels of Bcl-2 play a pivotal role in enhancing the cell’s vulnerability to apoptosis by compound 12.
Conclusions
In this investigation, 15 compounds were isolated from entire plants of C. fuscescens Lindl. var. brunnea, consisting of three new phenolic glycosides named coelofusides A–C (1–3) and 12 known compounds (4–15). The NMR data for 4-O-(6′-O-glucosyl-4″-hydroxybenzoyl)-4-hydroxybenzyl alcohol (4) were reported for the first time in this study. This research demonstrated that both ethyl acetate and aqueous extracts of C. fuscescens var. brunnea showed potential cytotoxic activity against human breast cancer cells T47D and MDA-MB-231. Compounds (1, 3–15) were analyzed concurrently, and compounds 8, 10, 11, and 12 exhibited significant anticancer effects on T47D and MDA-MB-231 when compared to anticancer drugs (etoposide and carboplatin). Oxoflavidin (12) displayed the most potent cytotoxicity on MDA-MB-231 with an IC50 value of 26.26 ± 4.33 μM. The assessment of its capability to hinder cell proliferation and induce apoptosis in human breast cancer cell lines was conducted through 3- (4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) assay, Hoechst/PI staining, and quantitative RT-PCR analysis. Our findings indicate that the bioactive compounds present in C. fuscescens Lindl. var. brunnea hold potential as anticancer agents for treating human breast cancer. Compound 12 might serve as a promising candidate for the advancement of effective anticancer drugs for targeting breast cancer.
Experimental Section
General Experimental Procedures
Optical rotation was determined by a Jasco P-2000 digital polarimeter (Easton, MD, USA). UV spectra were recorded with a Milton Roy Spectronic 3000 Array spectrophotometer (Rochester, Monroe, NY, USA). CD spectra were obtained from a Jasco J-815 CD spectrophotometer (Hachioji, Tokyo, Japan). FT-IR spectra were measured with a PerkinElmer FT-IR 1760X spectrophotometer (Boston, MA, USA). The Bruker MicroTOF mass spectrometer (ESI-MS) (Billerica, MA, USA) was used to measure mass spectra. NMR spectra were carried through a Bruker Avance Neo 400 MHz NMR spectrometer (Billerica, MA, USA). Semipreparative high-performance liquid chromatography (HPLC) was conducted using the Shimadzu HPLC (Kyoto, Japan). Chromatography was conducted by silica gel 60 (no. 1.07734.2500), size 0.063–0.200 mm and (no. 1.09385.2500), size 0.040–0.063 mm (Merck, NJ, USA). Reverse-phase column chromatography was done by RP-18 (no. 1.13900.1000), size 40–63 μm (Merck KGaA, Darmstadt, Germany). Sephadex LH-20 (Merck, NJ, USA) was also used for the isolation of compounds. Diaion HP-20 column chromatography was performed on polar copolymer styrene-divinylbenzene adsorbent resin with a particle size of 0.5 mm in diameter (Mitsubishi, Tokyo, Japan). The purity of isolated compounds was initially assessed through thin-layer chromatography, silica gel 60 F254 plates (Merck, NJ, USA) under UV light.
Plant Material
The whole plants of C. fuscescens Lindl. var.brunnea were obtained from the Chatuchak market in October 2019. Authentication was done by Mr. Yanyong Punpreuk, Department of Agriculture, Bangkok, Thailand. A voucher specimen (BS-CF-102562) has been placed at the Department of Pharmacognosy and Pharmaceutical Botany, Faculty of Pharmaceutical Sciences, Chulalongkorn University.
Extraction and Isolation
Dried whole plants of C. fuscescens Lindl. var.brunnea (2.3 kg) were macerated with ethanol (EtOH) (5 × 10 L). The ethanolic extract (530 g) was mixed with water and subjected to partitioning with ethyl acetate (EtOAc). This process yielded an ethyl acetate extract (99.2 g) and an aqueous extract (428.2 g).
The ethyl acetate extract was then separated by vacuum liquid chromatography (silica gel, EtOAc-hexane, gradient) to yield nine fractions (F1–F9). F4 (7.8 g) was subjected to further fractionation on a silica gel column (EtOAc-hexane, gradient) to yield compound 5 (50 mg). Fraction F6 (5 g) was separated on a silica gel column (EtOAc-hexane, gradient), resulting in three fractions (F6A–F6C), and fraction F6B (1 g) was then subjected to CC using an EtOAc-hexane gradient to yield three fractions (F6BA–F6BC). F6BA (150 mg) was separated again on CC (silica gel, EtOAc-hexane, gradient) to give compounds 6 (7.8 mg) and 7 (2.8 mg). F6BB (250 mg) was separated by CC (silica gel, EtOAc-hexane, and gradient) to produce compounds 8 (29.3 mg) and 9 (14 mg). F6BC (500 mg) was subjected to CC (silica gel, EtOAc-hexane, and gradient) to produce compounds 10 (37.1 mg) and 11 (120.9 mg). Fraction F7 (35 g) was fractionated on a silica gel column (EtOAc-hexane, gradient), and four fractions (F7A–F7D) were obtained. Fraction F7D (155 mg) was purified again by Sephadex LH-20 (acetone) to give three fractions (F7D1–F7D3). Fraction F7D3 (34 mg) was then separated on silica gel (EtOH-toluene, 0.5:9.5) to furnish compound 12 (14 mg). Fraction F8 (5 g) was then separated by CC on silica gel with a gradient of EtOH–dichloromethane to yield four fractions (F8A–F8D). F8B (800 mg) was separated again by Sephadex LH-20 (acetone) to yield three fractions (F8B1–F8B3). F8B2 (300 mg) was further separated on a silica gel column (EtOH-dichloromethane,1:9), and three fractions (F8B2A–F8B2C) were obtained. F8B2A (50 mg) was separated again by HPLC using the reverse phase (MeOH–H2O, 1:1) to yield compound 1 (2.3 mg). F8C (450 mg) was isolated again by Sephadex LH-20 (methanol) to give four fractions (F8C1–F8C4). F8C2 (100 mg) is separated again with a silica gel column (EtOH-dichloromethane,1:9) to yield four fractions (F8C2A–F8C2D). Compound 2 (1.9 mg) was obtained from the fraction F8C2C (30 mg) by Sephadex LH-20 (acetone). F8C3 (100 mg) was separated on CC (silica gel, EtOH-dichloromethane,1:9) to produce four fractions (F8C3A–F8C3D). F8C3B (50 mg) was separated by Sephadex LH-20 (MeOH), and compound 4 (17.7 mg) was obtained. Separation of fraction F8D (899 mg) was done by reverse-phase column chromatography (RP-18), with gradient elution of MeOH (0–100%) in H2O to give four fractions (F8D1–F8D4). F8D2 was separated again by Sephadex LH-20 (MeOH) to produce three fractions (F8D2A–F8D2C). F8D2B (8.5 mg) was separated by HPLC using reverse-phase (MeOH–H2O, 1:1) and normal-phase preparative thin-layer chromatography using mobile phase (EtOH-dichloromethane, 2:8) to furnish compound 13 (3.5 mg). F8D4 (20.7 mg) was separated by CC (silica gel, EtOH-dichloromethane, and gradient) to produce three fractions (F8D4A–F8D4C). Compound 14 (3.5 mg) was obtained by purification of F8D4B (6 mg) with Sephadex LH-20 (MeOH).
The aqueous extract (428.2 mg) was separated with Diaion HP-20 (MeOH–H2O, gradient) to give five fractions (AA–AE). Fraction AB (2 g) is separated again on a silica gel column (EtOH-dichloromethane, 3:7), and five fractions (ABA–ABE) were obtained. Compound 15 (68.4 mg) was produced by the purification of the ABE fraction (200 mg) with Sephadex LH-20 (MeOH). Fraction AC (1 g) was purified again by Sephadex LH-20 (MeOH) to give four fractions (ACA–ACD). ACB (200 mg) was separated by CC (silica gel, EtOH-dichloromethane, 3:7) to produce three fractions (ACB1–ACB3). ACB2 (36.8 mg) was subjected to semipreparative HPLC (silica gel) using the mobile phase (MeOH-dichloromethane, 1:9), and compound 3 (4.3 mg) was furnished.
Coelofuside A (1)
White amorphous solid; [α]20D + 1.75 (c 0.04, MeOH); UV (MeOH): λmax (log ε) 210 (4.02), 255 (4.08); HR-ESI-MS: [M – H]− at m/z: 525.1397 (calcd for C27H25O11, 525.1396); ECD (MeOH): λmax (Δε) 201.7 (−0.27), 208.3 (+0.09), 210.9 (−0.07), 212.4 (+0.02), 215.2 (−0.06), 217.6 (+0.08) nm (Figure S10); IR: νmax at 3370, 2921, 1712, 1607, 1513, 1279, 1072 cm–1.
Coelofuside B (2)
White amorphous solid; [α]20D + 4.75 (c 0.04, MeOH); UV (MeOH): λmax (log ε) 210 (4.32), 250 (4.40); HR-ESI-MS; [M – H]− at m/z: 433.1121 (calcd for C21H21O10, 433.1134); ECD (MeOH): λmax (Δε) 201.8 (−0.09), 205.6 (+0.31), 210.0 (+0.19), 211.5 (−0.0002), 222.5 (−0.08), 224.5 (+0.03) nm (Figure S19); IR: νmax at 3353, 2919, 1700, 1610, 1512, 1286, 1065 cm–1.
Coelofuside C (3)
White amorphous solid; [α]20D – 1.88 (c 0.08, MeOH); UV (MeOH): λmax (log ε) 220 (4.30), 230 (4.06), 275 (4.20); HR-ESI-MS: [M – H]− at m/z: 1033.3543 (calcd for C49H61O24, 1033.3552); ECD (MeOH): λmax (Δε) 202 (+17.29), 203 (+6.87), 206 (+4.96), 209 (+4.40), 218 (+4.33), 221 (−7.97), 223 (−7.17), 225 (−6.92), 227 (−3.79) nm (Figure S3); IR: νmax at 3382, 2925, 1727, 1611, 1512, 1386, 1369, 1230, 1074 cm–1.
4-O-(6′-O-Glucosyl-4″-hydroxybenzoyl)-4-hydroxybenzyl Alcohol (4)
White amorphous solid; [α]20D – 2.75 (c 0.04, MeOH); UV (MeOH): λmax (log ε) 210 (4.12), 230 (3.72), 260 (4.06), 314.8 (3.14); HR-ESI-MS: [M – H]− at m/z: 405.1176 (calcd for C20H21O9, 405.1185); ECD (MeOH): λmax (Δε) 201.5 (−0.17), 203.7 (+0.14), 208.8 (+0.08), 214.9 (−0.12), 222.3 (−0.14), 227.7 (−0.11) nm (Figure S37); IR: νmax at 3347, 2919, 1700, 1608, 1513, 1284, 1071 cm–1.
Cell Culture
The breast cancer cell lines T47D (human hormone-dependent breast cancer) and MDA-MB-231 (a highly aggressive, invasive, and poorly differentiated triple-negative breast cancer) as well as the human normal keratinocyte HaCaT cell line were obtained from the American Type Culture Collection (Manassas, VA, USA). Dulbecco’s modified eagle Medium (Gibco, Grand Island, NY, USA) was used for culturing T47D, MDA-MB-231, and HaCaT cell lines. 10% fetal bovine serum (Merck, DA, Germany), 100 units/ml of penicillin/streptomycin (Gibco, Grand Island, NY, USA), and 2 mM l-glutamine (Gibco, Grand Island, NY, USA) were used for supplementation of the medium. The cells were cultured in a controlled environment with 5% CO2 at a temperature of 37 °C.
Cell Viability Assay
Cell viability was evaluated by using the MTT assay. T47D, MDA-MB-231, and HaCaT cells (5 × 103 cells) were seeded into each well of a 96-well plate, and cell attachment was facilitated by an overnight incubation. Following this, the cells were treated with varying concentrations of the aqueous and ethyl acetate extracts of C. fuscescens Lindl. var. brunnea (ranging from 0 to 500 μg/mL) and for pure compounds 8, 10, 11, 12, etoposide, and carboplatin (ranging from 0 to 200 μM). The cytotoxicity assay was performed after 48 h. Post-treatment, the cells were exposed to 100 μL of the MTT solution for 4 h at 37 °C. The absorbance of the resulting MTT product was assessed at 570 nm using a microplate reader. The percentage of viable cells was determined to be relative to the control cells.
Cell Death Evaluation
The level of apoptotic and necrotic cell death was assessed through costaining with Hoechst 33342 and PI. Following the treatments, cells were stained with 10 μg/mL Hoechst and 5 μg/mL PI for 30 min at 37 °C and then observed. The images of cells were obtained using fluorescence microscopy. (Olympus IX 51 with DP70; Olympus, Tokyo, Japan).
Extraction of RNA from Cells
The cells were seeded and grown for 24 h. Subsequently, the cells were exposed to oxoflavidin (0–25 μM) which is the IC50 of the MDA-MB-231 cell lines. Ribonucleic acid (RNA) was extracted by centrifuging the cells with 500 μL of phosphate-buffered saline at 3,000 rpm for 5 min, then adding TRIzol reagent solution with volume 1000 μL, mixing and leaving at 4 °C for 5 min, and then adding 200 μL of chloroform and leaving at room temperature 5 min. Following this, the sample was centrifuged at 12,000 rpm for 15 min at 4 °C. The RNA molecule layer was separated into a colorless upper aqueous layer, placed in a 1.5 mL Eppendorf tube, and 500 μL of 100% isopropanol, incubated at room temperature for 10 min, and then centrifuged at 12,000 rpm for 15 min at a temperature of 4 °C. After that, the supernatant was poured to get the RNA pellet. 75% Ethanol (500 μL) was used to wash the RNA pellet and then centrifuged at 10,000 rpm for 5 min at 4 °C for two cycles. Then, the RNA pellet was left to dry for 15 min and then resuspend. With DEPC water, volume 50 μL, the concentration (concentration) and purity (purification) of RNA molecules extracted were measured with Nanodrop and a bioanalyzer. Extracted RNA samples can be stored in a −80 °C freezer.
Quantitative Real-Time PCR
qPCR reaction mixture consisted of 0.5 μL of the products of the RT reaction, 0.4 μL of forward primer (10 μM), 0.4 μL of reverse primer (10 μM), 10 μL of SYBR qPCR SuperMix, and 8.7 μL of nuclease-free H2O to achieve a total volume of 20 μL. The qPCR reaction involved denaturation at 95 °C for 30 s, following 45 cycles of 95 °C for 5 s and 58 °C for 35 s using a real-time thermal cycler (7500 Real-Time PCR System; Applied Biosystems, Thermo Fisher Scientific). Negative controls included no template reactions. Product specificity in real-time PCR was confirmed through melting curve analysis, gel electrophoresis, and sequencing. GAPDH was used as endogenous control gene, and the messenger RNA level in MDA-MB-231 cells treated with oxoflavidin was normalized to that of untreated control using the 2-ΔΔCT method.
List of primers for quantitative RT-PCR
-
1.
Bcl-2—FW: GATAACGGAGGCTGGGATGC, RV: TCACTTGTGGCCCAGATAGG
-
2.
Bax—FW: AAACTGGTGCTCAAGGCCC, RV: CTTCAGTGACTCGGCCAGG
-
3.
Caspase-3—FW:GAGCCATGGTGAAGAAGGAATA,RV: TCAATGCCACAGTCCAGTTC
-
4.
Caspase-9—FW: CGACCTGACTGCCAAGAAA, RV: CATCCATCTGTGCCGTAGAC
-
5.
PARP—FW: AGCACAGTGCGGATTCTGTC, RV: ACCGTTGTTGACCTCACAGT
-
6.
p53—FW: GAGATGTTCCGAGAGCTGATG, RV: TTTATGGCGGGAGGTAGACT
-
7.
Gapdh—FW: TTCAGCTCAGGGATGACCTT
-
8.
Gapdh—RV: ACCCAGAAGACTGTGGATGG
Statistical Analysis
GraphPad Prism Version 8 was employed for the analysis of all data. Data were presented as the mean ± SD, and the analysis was based on at least three independent experiments. Statistical analyses were conducted using one-way analysis of variance, followed by Tukey’s post hoc test, with a significance level set at p < 0.05.
Acknowledgments
M.T.T. is grateful to Chulalongkorn University for a C2F (Second Century Fund) postdoctoral fellowship under the supervision of B.S.
Supporting Information Available
The Supporting Information is available free of charge at https://pubs.acs.org/doi/10.1021/acsomega.3c07048.
HR-ESI-MS spectra; UV spectra; FT-IR spectra of compounds 1–4; 1D and 2D NMR of compounds 1–15; CD spectra of compounds 1, 2, 4, 13, and 14; and IC50 values of compounds 8, 10, 11, 12, etoposide, and carboplatin against the T47D and MDA-MB-231 breast cancer cell lines and the HaCaT human keratinocyte (PDF)
The authors declare no competing financial interest.
Notes
During the preparation of this work, the author(s) used GPT-3.5 and Bard AI in order to assist in the writing process. After using this tool/service, the author(s) reviewed and edited the content as needed and take full responsibility for the content of the publication.
Supplementary Material
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