Table:
Sample Id† | Specimen | Age group [yrs] | Gender | Ct. Gemy_1‡ | Ct. Gemy_2§ | Specimen collection date | District¶ | Province |
---|---|---|---|---|---|---|---|---|
| ||||||||
N0000218 | CSF | 11–15 | M | 32.42 | 30.68 | 2020 Feb | Kaski | Gandaki |
N0000256 | CSF | 0–5 | F | 29.41 | 29.34 | 2020 July | Myagdi | Gandaki |
N0000300 | CSF | 6–10 | F | 32.95 | 31.46 | 2020 Sep | Palpa | Lumbini |
N0000358 | Serum | 0–5 | M | 29.27 | 29.94 | 2022 Feb | Sarlahi | Madhesh |
N0000359 | CSF | 0–5 | F | 27.4 | 27.08 | 2022 Feb | Kapilvastu | Lumbini |
N0000395 | CSF | 0–5 | M | 30.74 | 30.73 | 2022 April | Kaski | Gandaki |
N0000434 | CSF | 56–60 | M | 29.02 | 30.06 | 2022 June | Lalitpur | Bagmati |
N0000468 | CSF | 30–35 | F | 30.84 | 31.47 | 2022 July | Chitwan | Bagmati |
N0000490 | CSF | unknown | M | 29.86 | 32.08 | 2022 July | Syangja | Gandaki |
N0000545 | CSF | 70–75 | F | 26.84 | 25.35 | 2022 Aug | Kathmandu | Bagmati |
N0000546 | CSF | 20–25 | M | 24.65 | 23.53 | 2022 Aug | Kathmandu | Bagmati |
N0000722 | CSF | 20–25 | F | 28.74 | 29.72 | 2022 Nov | Chitwan | Bagmati |
Ct., cycle threshold; yrs, years.
The sample IDs are coded and are not known outside the research group.
Gemy_1: qPCR targeting capsid protein gene.
Gemy_2: qPCR targeting replication associated protein (REP) gene.
Districts involved are highlighted in Figure 3 as shade.