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Cancer Science logoLink to Cancer Science
. 2007 Apr 5;98(5):764–765. doi: 10.1111/j.1349-7006.2007.00472.x

Erratum

PMCID: PMC11159165

The publisher would like to draw the reader's attention to some errors in the following article:

Nobuyoshi Shimizu, Masafumi Ohtsubo, Shinsei Minoshima. MutationView/KMcancerDB: A database for cancer gene mutations. Cancer Science 2006; 98: 259–67.

In the following instances, MutationView/KMcancerDB, MutationView and KMcancerDB were printed in roman type and should have appeared in italic type, as MutationView/KMcancerDB, MutationView and KMcancerDB:

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    on page 259, in the last line of the abstract and in the last line of the introduction

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    on page 262, in the heading before the second paragraph, in the sub‐heading before the third paragraph, and in line 15 of the last paragraph

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    on page 264 in the first line of the first paragraph, in the first, fifth and sixth lines of the second paragraph, and in the first and second lines of the third paragraph

On page 259, in the seventh line of the abstract, the sentence should have read:

DNA/protein diagnosis

not DNA protein diagnosis as originally published

On page 260, in Table 1:

Table 1.

Various cancer‐related databases

Database name Gene Internet address Ref
Locus‐specific Database
Familial Adenomatous Polyposis at GeneDis APC http://life2.tau.ac.il/GeneDis/Tables/APC/apc.html
UMD Locus Specific Databases APC, MEN1, VHL, others http://www.umd.be/  4
ATbase – a registry of patients with ataxia‐telangiectasia ATM http://www.cnt.ki.se/ATbase
Ataxia‐Telangiectasia Mutation Database ATM http://www.benaroyaresearch.org/bri_investigators/atm.htm
Bloom Syndrome‐BLMbase BLM http://bioinf.uta.fi/BLMbase/index2.html 15
Breast Cancer Mutation Database BRCA1, BRCA2 http://research.nhgri.nih.gov/bic/
CDKN2a Database Project (a human p16 database with annotation) CDKN2A http://biodesktop.uvm.edu/perl/p16
EGFR Mutation Database EGFR http://www.cityofhope.org/cmdl/egfr_db/index.html
Fanconi Anaemia Mutation Database FANCA, FANCB, FANCC, FANCD1, FANCD2, FANCE, FANCF, FANCG, others http://www.rockefeller.edu/fanconi/mutate/
LYSTbase: Mutation registry for Chediak‐Higashi syndrome LYST http://bioinf.uta.fi/LYSTbase/
MMR Databank MLH1, MLH3, MSH2, MSH6, PMS1, PMS2 http://www.insight‐group.org/
Mismatch Repair Genes Variant Database MLH1, MSH6, MSH6 http://www.med.mun.ca/mmrvariants/
NF1 International Mutation Databas NF1 http://www.nfmutation.org/
NF2 International Mutation Database NF2 http://www.nfmutation.org/
PTCH Mutation Database PTCH http://www.cybergene.se/cgi‐bin/w3‐msql/ptchbase/index.html
Retinoblastoma Genetics RB1 http://www.verandi.de/joomla/ 16
SH2D1Abase: Mutation registry for X‐linked lymphopreliferative syndrome (XLP) SH2D1A http://bioinf.uta.fi/SH2D1Abase/
IARC TP53 Mutation Database TP53 http://www‐p53.iarc.fr/  3
p53 web site TP53 http://p53.free.fr
Database of Germline p53 Mutations TP53 http://www.lf2.cuni.cz/projects/germline_mut_p53.htm 17
p53 Mutation Database Analysis & Search TP53 http://p53.genome.ad.jp/
TP53 mutation database (UMD LSDB) TP53 http://www.umd.be:2072/  5
Human p53 database and software TP53 http://sunsite.unc.edu/dnam/des_p53.htm 18
TSC Mutation Database TSC1, TSC2 http://chromium.liacs.nl/lovd/index.php?select_db=TSC1 19
The Cardiff‐Rotterdam Tuberous sclerosis mutation database TSC2 http://www.uwcm.ac.uk/uwcm/mg/tsc_db/
WASbase: Mutation registry for Wiskott‐Aldrich syndrome (WAS) WAS http://bioinf.uta.fi/WASbase/
Database of WS‐associated WRN mutations WRN http://www.pathology.washington.edu/werner/ws_wrn.html
GeneDis; Human Genetic Disease Database http://life2.tau.ac.il/GeneDis/
MutationView 1 http://mutview.dmb.med.keio.ac.jp/ 12,13
Databases specialized for cancers
COSMIC; Catalogue of Somatic Mutations in Cancer http://www.sanger.ac.uk/genetics/CGP/cosmic/  6
Atlas of Genetics and Cytogenetics in Oncology and Haematology http://www.infobiogen.fr/services/chromcancer/  7
Cancer Genome Anatomy Project, CGAP http://cgap.nci.nih.gov/  8
The Tumor Gene Database http://condor.bcm.tmc.edu/ermb/tgdb/tgdb.html  9
Cancer Gene Expression Database, CGED http://cged.hgc.jp/ 20
Central Mutation Databases
Genome Database, GDB http://www.gdb.org/ 21
Genatlas http://www.dsi.univ‐paris5.fr/genatlas/ 22
GeneCards Database http://www.genecards.org/index.shtml 23
Human Genome Variation database, HGVbase http://hgvbase.cgb.ki.se/ 24
Human Organised Whole Genome Database, HOWDY http://howdy.jst.go.jp/ 25
Online Mendelian Inheritance in Man, OMIM http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=OMIM 10
Human Gene Mutation Database, HGMD http://www.hgmd.cf.ac.uk/ac/index.php 11
Sequence Tag Alignment and Consensus Knowledgebase, STACK http://www.sanbi.ac.za/Dbases.html 26

1) See Table 2 and 4 for the genes included in MutationView/KMcancerDB.

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    in line 41, ‘MutationView’ should have been indented, as it should be listed as a Locus‐specific Database

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    in line 42, ‘Databases specialized for cancers’ should be aligned to the left, as it is a heading to the five databases that are listed below it

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    in line 48, ‘Cancer Gene Expression Database’ should be indented, as it is a database specialized for cancers

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    in line 49, ‘Central Mutation Databases’ should be aligned to the left, as it is a heading to the eight databases that are listed below it

Please see the amended Table 1 below, for the correct format.

On page 261, in the 12th line of the paragraph headed ‘Online Mendelian Inheritance in Man’, the sentence should have read:

discovery/research history of the disease/gene and details of patient cases

not discovery‐research history of the disease‐gene and details of patient cases, as originally published

On page 262, in the 12th line of the paragraph headed ‘Access to genes’, part of the database name should have read:

cDNA

not CDNA as originally published.

On page 263, in the fourth line of the legend for Fig. 1, the legend for part (d) should have read:

organ/tissue names

not organ‐tissue names as originally published.

The publisher apologizes for these errors and any confusion they may have caused.


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