Extended Data Fig. 3. AlphaFold 3 predictions of PoseBusters examples for which Vina and Gold were inaccurate.
Predicted protein chains are shown in blue, predicted ligands in orange, and ground truth in grey. a, Human Notum bound to inhibitor ARUK3004556 (PDB ID 8BTI, ligand RMSD: 0.65 Å). b, Pseudomonas sp. PDC86 Aapf bound to HEHEAA (PDB ID 7KZ9, ligand RMSD: 1.3 Å). c, Human Galectin-3 carbohydrate-recognition domain in complex with compound 22 (PDB ID 7XFA, ligand RMSD: 0.44 Å).