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. 2024 Jun 21;19(6):e0304980. doi: 10.1371/journal.pone.0304980

Influence of selected non-antibiotic pharmaceuticals on antibiotic resistance gene transfer in Escherichia coli

Doaa Safwat Mohamed 1, Rehab Mahmoud Abd El-Baky 2,3,*, Mohamed Ahmed El-Mokhtar 4,5, Sahar K Ghanem 6, Ramadan Yahia 3, Alaa M Alqahtani 7, Mohammed A S Abourehab 8, Eman Farouk Ahmed 1
Editor: Farah Al-Marzooq9
PMCID: PMC11192386  PMID: 38905247

Abstract

Background

Antibiotic resistance genes (ARGs) transfer rapidly among bacterial species all over the world contributing to the aggravation of antibiotic resistance crisis. Antibiotics at sub-inhibitory concentration induce horizontal gene transfer (HRT) between bacteria, especially through conjugation. The role of common non-antibiotic pharmaceuticals in the market in disseminating antibiotic resistance is not well studied.

Objectives

In this work, we indicated the effect of some commonly used non-antibiotic pharmaceuticals including antiemetic (metoclopramide HCl) and antispasmodics (hyoscine butyl bromide and tiemonium methyl sulfate) on the plasmid-mediated conjugal transfer of antibiotic resistance genes between pathogenic E. coli in the gastric intestinal tract (GIT).

Methods

Broth microdilution assay was used to test the antibacterial activity of the tested non-antibiotic pharmaceuticals. A conjugation mating system was applied in presence of the studied non-antibiotic pharmaceuticals to test their effect on conjugal transfer frequency. Plasmid extraction and PCR were performed to confirm the conjugation process. Transmission electron microscopy (TEM) was used for imaging the effect of non-antibiotic pharmaceuticals on bacterial cells.

Results

No antibacterial activity was reported for the used non-antibiotic pharmaceuticals. Plasmid-mediated conjugal transfer between isolates was induced by metoclopramide HCl but suppressed by hyoscine butyl bromide. Tiemonium methylsulfate slightly promoted conjugal transfer. Aggregation between cells and periplasmic bridges was clear in the case of metoclopramide HCl while in presence of hyoscine butyl bromide little affinity was observed.

Conclusion

This study indicates the contribution of non-antibiotic pharmaceuticals to the dissemination and evolution of antibiotic resistance at the community level. Metoclopramide HCl showed an important role in the spread of antibiotic resistance.

1. Introduction

One of the most challenges or the biggest threats as described by the World health organization (WHO) is the emergence of antimicrobial resistance (AMR). As WHO said that if no action is taken against the rapid increase in antimicrobial resistance, more than 10 million people will die by 2050 [1]. Extensive use of antibiotics causes selective pressure on microbes giving rise to the emergence of resistant cells [27]. Horizontal gene transfer (HGT) is one of the major means of transferring or disseminating antibiotic resistance genes (ARGs) in the surrounding environment. Horizontal gene transfer can occur by conjugation, transduction, and transformation. Regarding conjugation, the exchange of genetic material between the donor and the recipient occurs by direct cell to- cell contact or via a connecting pilus [8, 9]. Typically, the exchange is mediated by mobile genetic elements, such as a conjugative plasmid. In addition, it was found that it is the most common way for disseminating antimicrobial resistance. Despite the spontaneous frequency of conjugation being rare, extensive use of antibiotics especially at concentrations lower than their MICs may lead to an increase in the frequency of the conjugation process [10, 11]. At clinically and environmentally relevant concentrations, commonly used non-antibiotic pharmaceuticals, such as β-blockers, lipid-lowering medications, and non-steroidal anti-inflammatories, significantly accelerated the spread of antibiotic resistance through plasmid-borne bacterial conjugation. The bacterial response to these drugs was investigated using a variety of indicators, such as whole-genome RNA and protein sequencing, cell arrangement, flow cytometry for the measurement of reactive oxygen species (ROS) and cell membrane permeability [11]. Accordingly, looking for unique conjugation inhibitors is an essential challenge in the fight against the spread of antibiotic resistance genes for improving the bacterial response toward antibiotics [12, 13]. It was recently documented that the consumption of non-antibiotic prescribed drugs represents about ninety fifth of the drug market [14], the role of these prescribed drugs in the evolution of antibiotic resistance has received comparatively very little attention [15]. It remains unknown whether all non-antibiotic prescribed drugs promote conjugation between bacterial strains or not which will be of clinical concern, as conjugative multidrug resistance plasmids enable quick expression of multidrug resistance phenotypes, therefore facilitating the emergence and widespread of antibiotic-resistant microorganisms [16]. Additionally, it’s not clear whether there are common properties between the non-antibiotic prescribed drugs, or shared mechanisms that promote the ARGs horizontal transfer [11].

Gastro-intestinal tract (GIT) infection is one of the most common infections worldwide. Escherichia coli, a member of the microorganism family of Enterobacteriaceae, is the most prevailing commensal dweller of the gastrointestinal tracts of humans and warm-blooded animals, as well as one of the most important pathogens inflicting GIT infection [17, 18]. Diarrheagenic pathotypes of E. coli (enterotoxigenic E. coli [ETEC], enteropathogenic E. coli [EPEC], enteroinvasive E. coli [EIEC], and enteroaggregative E. coli [EAEC]) are detected with high detection rate [19]. Patients suffering from these infections receive antibiotics beside GIT concomitant pharmaceuticals such as, antiemetic and antispasmodic drugs. These drugs are metoclopramide hydrochloride, hyoscine butyl bromide and tiemonium methyl sulfate. Metoclopramide is usually directed to treat a large variety of epithelial duct disorders [20]. It may be used for the treatment of nausea and physiological reaction [21]. Hyoscine butyl bromide is usually used as associate in spasmolytic treatment for the pain and discomfort iatrogenic by abdominal cramps [22].

Tiemonium methyl sulfate is an antimuscarinic quaternary ammonium agent with peripheral atropine similar effect and is employed within the relief of visceral spasms [23]. The transfer of conjugative plasmids may be affected by these prescribed pharmaceuticals. However, the effect of these non-antibiotic pharmaceuticals on bacterial resistance or antibiotic activity remains unknown. In this work, we study the relationship between antimicrobial resistance and commonly used pharmaceuticals such as: metoclopramide HCl as an antiemetic and hyoscine butyl bromide and tiemonium methylsulfate as antispasmodics. The aim of this study is to examine if these pharmaceuticals have effect or not on conjugal transfer frequency among pathogenic E. coli isolates in the GIT.

2. Materials and methods

2.1 Bacterial isolates and reagents

Four E. coli strains were used for conjugative transfer testing. Two strains were obtained from Hiper® bacterial conjugation kit (HTM004, HiMedia). Donor E. coli strain (Product code: TKC181) and Recipient E. coli strain (Product Code: TKC182). Two E. coli strains were isolated from patients suffering from gastrointestinal tract infection, E. coli-1 with plasmid harboring resistance gene for tetracycline was the donor and E. coli-5 with high chromosomally encoded resistance to streptomycin was used as the recipient.

Streptomycin sulphate and tetracycline hydrochloride were included in Hiper® bacterial conjugation kit obtained from HiMedia (India). Hyoscine butyl bromide and metoclopramide HCl were obtained from Sigma Aldrich (USA) while tiemonium methyl sulfate was purchased from Medica Pharma Specialty Pharmaceutical Chemicals (Netherlands).

Our study was conducted according to the guidelines of the Declaration of Helsinki, priori approval (No. 2/2022) by the ethical committee of Faculty of Pharmacy, Deraya University.

2.2 Preparation of isolates for the study

Strains obtained from Hiper® bacterial conjugation kit, Donor strain A was streaked on 2 LB plates with tetracycline (30μg/mL) and the Recipient strain was streaked on LB plates with streptomycin (100μg/mL) and incubated at 37°C overnight.

For clinical strains, Isolation of E. coli strains was performed by MacConkey’s agar and confirmed biochemically with various screening tests. Disc method was done to select an E. coli isolate (Resistant only to tetracycline) and another one (Resistant only to streptomycin) to be used as donor and recipient, respectively. Both genomic and plasmid DNA were extracted from the selected isolates (Qiagen plasmid plus midi kit and Qiaprep spin miniprep kit, USA) and polymerase chain reaction was used to amplify tetracycline and streptomycin resistance genes and traF gene (encoded by conjugative plasmid and required for pilus assembly and plasmid transfer). PCR primer sequences and conditions are listed in Table 1.

Table 1. PCR conditions and primer sequences.

Primer sequences PCR conditions Ref.
traF Forward:
AAGTGTTCAGGGTGCTTCTGC
Reverse:
GTCGCCTTAACCGTGGTGTT
Initial denaturation (94ºC for 4 min.), 35 cycles (94ºC for 30 sec., 55ºC for 30 sec., 72ºC for 1 min), 7 min final extension [11]
tetA Forward:
GACTATCGTCGCCGCACTTA
Reverse:
ATAATGGCCTGCTTCTCGCC
Initial denaturation (94ºC for 4 min.), 30 cycles (94ºC for 30 sec., 54ºC for 30 sec., 72ºC for 1 min), 7 min final extension [11]
strA-strB Forward
TATCTGCGATTGGACCCTCTG
Reverse
CATTGCTCATCATTTGATCGGCT
Initial denaturation (95ºC for 60 s), 30 cycles (95ºC for 60 s, 60ºC for 30 s, 72ºC for 60 s). [24]

2.3 Testing antibacterial activity and MIC detection

Minimum inhibitory concentrations (MICs) of tetracycline, Streptomycin and non-antibiotic pharmaceuticals were tested using broth microdilution assay. The 96-well plates were incubated at 37°C for 20 h before the OD600 was measured on the plate reader. Wells containing sterile phosphates buffer saline were used as blank. MICs of the bacterial strains were determined as the concentration of the tested agent which inhibited 90% of the growth. Each bacterial strain under the inhibition of the different agents was tested at least in triplicate Hyoscine butylbromide, metoclopramide HCl and tiemonium methyl sulfate were chosen as the non-antibiotic pharmaceuticals for this study. Concentrations of antibiotics were serially diluted from 8 to 0.03125 μg/ml. Also, non-antibiotic pharmaceuticals were used in therapeutically allowed concentrations [25].

2.4 Conjugative transfer in absence and in presence of non-antibiotic pharmaceuticals

2.4.1 Conjugative transfer in absence of non-antibiotic pharmaceuticals

A single colony from both donor and recipient strains was inoculated in 6ml of LB broth. Then, incubated at 37°C overnight. One ml of overnight grown culture of standard strains or clinical strains was added to 25 ml LB broth with tetracycline. Three ml of overnight culture of the tested strains were added to 25 ml of LB with streptomycin. Cultures were overnight incubated at 37°C in a shaker. Two hundred μL of each donor and recipient cultures were added to a sterile test tube labeled as conjugated sample after gentle mixing and incubated for 1.5 hr without shaking. Two hundred μL of respective cultures were added to tubes labeled as donor and recipient with gentle mixing and incubated for 1.5hr without shaking. Then, 0.1 ml of each culture was plated on antibiotic containing culture media (one plate containing tetracycline, another plate containing streptomycin and the third containing both tetracycline and streptomycin to isolate transconjugants). Transconjugant colonies’ number was divided by donor colonies’ number to calculate the conjugative transfer frequency. The value of frequency of conjugal transfer was the average of four different trials. Growth of donor, recipient and transconjugants was not included in calculation due to absence of provided nutrients during the conjugation process [26].

2.4.2 Conjugative transfer in the presence of non-antibiotic pharmaceuticals

This work designed a mating model to detect the effect of non-antibiotic pharmaceuticals on conjugative transfer between the tested E. coli strains. This was achieved by growing donor and recipient isolates to an OD of 1.8 at 600 nm and mixing donor and recipient in nutrient broth (1:2) ratio in the presence of the following sub-inhibitory concentrations: 0.265 μg/ml (Equivalent to plasma concentration), 0.53 μg/ml, 1.06 μg/ml, 2.12 μg/ml and 4.24 μg/ml for metoclopramide HCl. For hyoscine butyl bromide; 0.005 μg/ml (Equivalent to plasma concentration), 0.01 μg/ml, 0.02 μg/ml, 0.04 μg/ml and 0.08 μg/ml were used. Finally, tiemonium methyl sulfate has sub-inhibitory concentrations of 0.8 μg/ml (plasma concentration), 1.6 μg/ml, 3.2 μg/ml, 6.4 μg/ml and 12.8 μg/ml. Levofloxacin was used at its sub-MIC as a positive control for conjugative transfer (0.125 μg/ml) [27]. After incubation for 3 hr. at 37ºC, mixture of donor and recipient (20 μL) was plated on tetracycline-streptomycin nutrient agar plates to count colonies of transconjugants. Transconjugant colonies’ number was divided by donor colonies’ number to calculate the conjugative transfer frequency. The value of frequency of conjugal transfer was the average of four different trials [11].

2.5 Reverse conjugation experiment in the presence of non-antibiotic agents

Transconjugant bacteria were considered as donor cells. Standard and clinical recipients described previously were used for the conjugate mating system. All strains were tested using different concentrations of the tested agents. Then, mixed by vertexing and incubated for 3h at 37°C without shaking. New transconjugants were used to inoculate agar plates containing antibiotics. Colonies were counted and the frequency of transfer was determined as prescribed above [11].

2.6 Verification of conjugative plasmid transfer

2.6.1 Determination of minimum inhibitory concentration of transconjugants

Minimum inhibitory concentrations (MICs) of transconjugants against tetracycline and streptomycin were determined by broth microdilution methods. The resulting MICs of transconjugants were compared to donor and recipient cells’ MICs [25].

2.6.2 Detection of plasmids

Colonies of transconjugants on selective tetracycline-streptomycin agar plates were picked and stored at -80ºC in glycerol stock (30%). Qiagen plasmid plus midi kit (Qiagen, USA) was applied for extraction of plasmids from donor and transconjugants. PCR was used to amplify plasmid-encoded traF and tetA genes in both donor and transconjugant. Agarose gel electrophoresis (1%) was used to observe plasmids and amplicons [26].

2.7 Transmission Electron Microscopy (TEM)

Effect of non-antibiotic pharmaceuticals on conjugative activity was studied using TEM (JEM1010, JEOL, Tokyo, Japan). After performing conjugation experiment with non-antibiotic pharmaceuticals and incubation for 24 hr, samples for TEM were collected and imaged. Also, a control sample in absence of non-antibiotic pharmaceuticals was included. Samples were prepared for TEM according to standard guidelines [28].

2.8 Statistical analysis

Statistical analysis was performed using GraphPad version 8.3.0 software. All data were obtained from at least three biological replicates and presented as mean ± SD. Unpaired t-test (normally distributed data) between two groups or one-way ANOVA among multiple groups were used to calculate P-values. Differences with P < 0.05 were considered significant [29].

3. Results

3.1 Antibacterial activity of non-antibiotic pharmaceuticals

Broth microdilution assay illustrated no inhibitory activity for metoclopramide, hyoscine butyl bromide and tiemonium methyl sulfate (MIC > 1024 μg/ml). Agar well diffusion assay was used to confirm the previous findings by reporting no inhibitory activity for the non-antibiotic pharmaceuticals against donor and recipient isolates (Fig 1).

Fig 1. Antibacterial activity of metoclopramide, hyoscine butyl bromide and tiemonium methyl sulfate: A) against donor isolate in comparison to streptomycin, B) against recipient isolate in comparison to tetracycline.

Fig 1

3.2 Non-antibiotic pharmaceuticals have different effects against ARGs conjugative transfer

For both standard and clinical E. coli strains; non-antibiotic pharmaceuticals were added at therapeutic concentrations. Metoclopramide HCl, at all five concentrations (from 0.265 to 4.24 μg/ml), the number of transconjugants dramatically increased (P < 0.05). Hyoscine butyl bromide, at concentrations from 0.005 to 0.01 μg/ml, slightly increased transconjugant number (P < 0.05). In contrast, tiemonium methyl sulfate at concentrations from 0.8 to 12.8 μg/ml, decreased the transconjugant number (P < 0.05). A threshold effect was observed for the pharmaceuticals under study, as the gradual increasing of the dose concentration influenced the conjugation response.

Fig 2a illustrates transconjugant colonies in absence of antibiotics and non-antibiotic pharmaceuticals as a control. Efficiency of conjugation between donor and recipient isolates was greatly promoted by metoclopramide HCl (Fig 2b) while was dramatically decreased by hyoscine butylbromide (Fig 2c). Also, slight induction of conjugal transfer by tiemonium methylsulfate was observed (Fig 2d). Levofloxacin at sub-MIC level greatly increased conjugal transfer compared to control conjugation tube (Fig 2e). Transfer ratio (expressed as number of transconjugants per recipient cells) and fold change of transfer ratio were illustrated for the tested non-antibiotic agents at different concentrations and levofloxacin at sub-MIC (Table 2). Fold change of transfer ratio was greatly enhanced in presence of metoclopramide HCl (Fig 3) and slightly increased with tiemonium methylsulfate (Fig 4). However, it was decreased in presence of hyoscine butylbromide as compared to negative control (Fig 5).

Fig 2. Effect of A) Control, B) Metoclopramide HCl, C) Hyoscine butylbromide, D) Tiemonium methylsulfate, and E) Levofloxacin at sub-MIC on conjugal transfer frequency.

Fig 2

Table 2. Conjugative transfer under the exposure of different concentrations of non-antibiotic pharmaceuticals.

Number of recipients in 1 ml Absolute number of transconjugants in 1 ml Fold change of transconjugant absolute number Transfer ratio (number of transconjugant / number of recipient) Fold change of Transfer ratio
Control 2.5 x 104±817 ±745.72 1.00±0.08 29.7 x 10−4±3 x 10−4 1.00±0.11
Metoclopramide HCl
0.265 μg/ml 2.3 x 104±12415 485±8.16 6.55±0.4 195 x 10−4±16 x 10−4 6.55±0.16*
0.53 μg/ml 2.4 x 104±12034 523±16.33 7.06±0.33 238 x 10−4±31 x 10−4 8.2±1.5*
1.06 μg/ml 2.2 x 104±11002 578±81.65 7.81±0.51 240 x 10−4±23 x 10−4 7.97±0.2*
2.12 μg/ml 2.5 x 104±12472 634±27.76 8.57±1.05 255 x 10−4±14 x 10−4 8.67±0.5*
4.24 μg/ml 2.4 x 104±11885 670±81.65 9.05±1.82 280 x 10−4±41 x 10−4 9.73±2.4*
Hyoscine butylbromide
0.005 μg/ml 2.5 x 104±817 39±16.33 0.53±0.18 16 x 10−4±7 x 10−4 0.51±0.18*
0.01 μg/ml 2.5 x 104±4082 32±8.16 0.43±0.08 14 x 10−4±6 x 10−4 0.44±0.14*
0.02 μg/ml 2.4 x 104±816 28±12.25 0.38±0.2 12 x 10−4±5 x 10−4 0.42±0.23*
0.04 μg/ml 2.2 x 104±3266 19±4.08 0.26±0.08 9 x 10−4±3 x 10−4 0.32±0.14*
0.08 μg/ml 2.4 x 104±4082 ±155.72 0.20±0.06 7 x 10−4±3 x 10−4 0.22±0.08*
Tiemonium methylsulfate
0.8 μg/ml 2.5 x 104±2449 74±8.16 1.00±0.19 29.6 x 10−4±4 x 10−4 1.01±0.12
1.6 μg/ml 2.5 x 104±3266 78±14.7 1.05±0.28 31 x 10−4±2 x 10−4 1.06±0.18
3.2 μg/ml 2.3 x 104±5312 83±10.6 1.12±0.23 37 x 10−4±8 x 10−4 1.26±0.3
6.4 μg/ml 2.5 x 104±4899 87±5.72 1.18±0.17 37 x 10−4±5 x 10−4 1.24±0.05
12.8 μg/ml 2.4 x 104±6532 88±13.06 1.19±0.27 40 x 10−4±17 x 10−4 1.42±0.74
Levofloxacin at sub-MIC (0.125 μg/ml) 2.2 x 104±1633 2500±408 33.78±8.21 1150 x 10−4±253 x 10−4 40.08±13.2*

Results are shown as mean ± SD, significant differences between non-antibiotic dosed samples and the control were analyzed by independent-sample t test.

* P < 0.05 were considered significant.

Fig 3. Fold changes of transfer ratio under the exposure of metoclopramide HCl at different concentrations.

Fig 3

Fig 4. Fold changes of transfer ratio under the exposure of tiemonium methyl sulfate at different concentrations.

Fig 4

Fig 5. Fold changes of transfer ratio under the exposure of hyoscine butyl bromide at different concentrations.

Fig 5

3.3 Reverse conjugation experiment in the presence of non-antibiotic agents

To test if the transconjugant is transferable, the reverse conjugative experiment is performed. The plasmid is transferred from conjugants to donners. It was seen that the conjugative transfer frequency was enhanced in the presence of metoclopramide HCl as compared to negative control. Also, an increase in the fold changes of the transfer frequency occurred in the presence of the tested drug. Transconjugant colonies were chosen and re-grown on selection plates to verify the identity of the recipient cells.

3.4 Determination of minimum inhibitory concentration of transconjugants

The MICs of the transconjugants against tetracycline and streptomycin were detected (Table 3) and were the same or higher than the donor or recipients MICs.

Table 3. Minimum inhibitory concentrations (MICs) of donor, recipient, and different transconjugants towards antibiotics.

Antibiotics MICs (mg/L)
Donor Recipient TC 1 TC 2 TC 3
Tetracycline 32 4 32 32 32
Streptomycin 4 64 64 64 64

*TC 1–3: transconjugants in mating system treated with hyoscine butylbromide, metoclopramide HCl and tiemonium methyl sulfate, respectively.

3.5 Detection of plasmids

Confirmation of successful conjugal transfer was done by plasmid analysis on agarose gel electrophoresis. Conjugative plasmid was detected in donor and transconjugant strains as illustrated by first and second lanes (Fig 6). Recipient isolate did not show any plasmid as recorded in lane 3.

Fig 6. Plasmid detection in donor (lane 1), transconjugants (lane 2) and recipient (lane 3).

Fig 6

3.6 Effect of non-antibiotic pharmaceuticals on conjugation efficiency

Fig 4 illustrates TEM images of conjugative transfer in the presence of non-antibiotic pharmaceuticals and in their absence as a control (Fig 7A1 and 7A2). Metoclopramide HCl induced conjugal transfer between donor and recipient as seen in the close contact between cells, periplasmic bridges and aggregation of cells (Fig 7B1 and 7B2). Hyoscine butylbromide decreased conjugal activity as observed in the little affinity between cells (Fig 7C).

Fig 7. TEM images for conjugal activity between donor and recipient A) Control, B) In presence of metoclopramide HCl, C) In presence of hyoscine butyl bromide.

Fig 7

4. Discussion

The present findings highlight the effect of non-antibiotic pharmaceuticals on bacterial behavior and how this will influence the dissemination of antibiotic resistance between isolates changing the duration of activity of used antibiotics. Antimicrobial resistance is considered a major health problem which arose mainly due to the misuse of antibiotics all over the world. This dilemma is usually attributed to various causes such as: availability of antibiotics everywhere and health care persons may suffer from lack of education. Also, many patients stop treatment with antibiotics upon feeling better, use leftover antibiotics and may use antibiotics in treating viral infection [3033].

The rapid dissemination of ARGs among bacterial species occurs through HGT. Conjugation is a common mechanism by which bacteria horizontally transfer their resistance genes for adaptation with stress conditions such as continuous antibiotic exposure and lack of nutrients [34]. Bacterial conjugation is a major promoter for bacterial genome evolution which supply bacteria by required genes for antimicrobial resistance, biofilm formation, virulence and heavy metal resistance [35, 36]. Sub-inhibitory concentration of antibiotics has been found to induce dissemination of antibiotic resistance by HGT particularly through conjugation and transformation [11, 37].

Not only antibiotics affect gene transfer between bacteria but also non-antibiotic pharmaceuticals may be supposed to have an effect as recorded for more than 200 non-antibiotic pharmaceuticals which influence gut bacteria like antibiotics do [15]. All over the world, non-antibiotic pharmaceuticals represent 95% of the total drugs in the market. Although their wide distribution, little is known about how non-antibiotic pharmaceuticals affect HGT between bacteria [38, 39].

Antiemetic and antispasmodic drugs are widely used by patients during their course of treatment of GIT infection caused by E. coli. So, in the present work, effect of metoclopramide HCl, hyoscine butylbromide and tiemonium methylsulfate on conjugal transfer between E. coli isolates was studied. Also, levofloxacin at sub-inihibitory concentration was included. Hyoscine butylbromide and tiemonium methylsulfate have antispasmodic activity while metoclopramide HCl has antiemetic effect. Metoclopramide HCl has antibiotic-like effect behavior as for promoting conjugal transfer between isolates especially when antibiotic is administered at sub-inhibitory concentration. While conjugal transfer frequency is dramatically increased by metoclopramide HCl, it was obviously suppressed by hyoscine butylbromide. This means that co-administration of metoclopramide HCl as antiemetic with antibiotics may promote the transfer of antibiotic resistance genes among pathogenic bacteria in the GIT decreasing the susceptibility to the antibiotic in the long run use.

Acceleration of dissemination of antibiotic resistance was reported for non-antibiotic pharmaceuticals such as ibuprofen, naproxen, diclofenac, gemfiprozil and propranolol as plasmid-borne conjugal transfer was promoted between bacteria of the same and different genera [11]. Also, dissemination of plasmid-mediated antibiotic resistance was induced by the antiepileptic carbamazepine [40]. These findings agree with what was obtained in our study for metoclopramide HCl. Norepinephrine has not revealed any effect on plasmid conjugal transfer between E. coli isolates [41]. The previous result agrees with what achieved in the present work for tiemonium methylsulfate which caused a slight increase in conjugal transfer between E. coli isolates [41]. In the present study, hyoscine butylbromide dramatically decreased conjugal transfer between tested E. coli supporting the activity of co-administered antibiotics by weakening the resistance of targeted pathogenic bacteria. Expired drug metoclopramide HCl indicated antibacterial activity for carbon steel in 0.5 M H3PO4 solution [42] which disagrees with what achieved in the present work as none of the tested non-antibiotic pharmaceuticals revealed antibacterial activity against isolates.

TEM imaging was applied to reveal changes of cell arrangement as an indicator to study the effect of metoclopramide HCl and hyoscine butylbromide on bacterial cells. Aggregation of cells, formation of periplasmic bridges and decreasing distances between cells were obviously noticed with metoclopramide HCl while with hyoscine butylbromide little affinity between cells was observed. In absence of non-antibiotic pharmaceuticals, cells were separated and intact but in presence of non-antibiotic pharmaceuticals, cells became closer to each other with partially damaged cell membrane [11].

In the present findings, the role of non-antibiotic pharmaceuticals in dissemination of antibiotic resistance between pathogenic gastrointestinal tract E. coli isolates was clearly demonstrated. Previous findings turn on alarm for bacterial response towards different administered pharmaceuticals highlighting the bacterial behavior when non-antibiotic pharmaceuticals are co-administered with antibiotics. As antibiotics at sub-inhibitory concentrations play important role in disseminating resistance genes through conjugation; it is suggested that some non-antibiotic pharmaceuticals like antiemetic drugs play the same role. Increased ROS production and cell membrane permeability were positively correlated with enhanced conjugation. Furthermore, these non-antibiotic drugs produced reactions like improved efflux pumps that is seen when bacteria are exposed to antibiotics. More work is required to illustrate the effect of pharmaceuticals in the market on the transfer of resistance genes and how this would contribute to maximize or minimize the antibiotic resistance crisis.

5. Conclusion

In prescribing antibiotics for treating intestinal pathogenic E.coli, antiemetic metoclopramide HCl was found to increase the spread of resistance against the co-administered antibiotic by promoting the plasmid-mediated conjugal transfer of antibiotic resistance genes leading to increasing the duration of infection, followed by tiemonium methylsulfate. While, antispasmodic hyoscine butylbromide showed lower rate of conjugal transfer in comparison to control.

Supporting information

S1 File

(DOCX)

pone.0304980.s001.docx (16.3KB, docx)
S2 File

(XLSX)

pone.0304980.s002.xlsx (28.3KB, xlsx)

Data Availability

All relevant data are within the manuscript and its Supporting information files.

Funding Statement

"The Deputyship for Research & Innovation, Ministry of Education in Saudi Arabia has supported this research work through the project number: IFP22UQU4290565DSR235".

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Decision Letter 0

Miquel Vall-llosera Camps

14 Mar 2024

PONE-D-23-09629

Role of Some Antiemetics and Antispasmodics in the dissemination of antibiotic resistance genes among intestinal pathogenic E. coli

PLOS ONE

Dear Dr. Abd El-Baky,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

I would like to sincerely apologise for the delay you have incurred with your submission. It has been exceptionally difficult to secure reviewers to evaluate your study. We have now received four completed reviews; the comments are available below. The reviewers have raised significant scientific concerns about the study that need to be addressed in a revision.

Please revise the manuscript to address all the reviewer's comments in a point-by-point response in order to ensure it is meeting the journal's publication criteria. Please note that the revised manuscript will need to undergo further review, we thus cannot at this point anticipate the outcome of the evaluation process.

One or more of the reviewers has recommended that you cite specific previously published works. Members of the editorial team have determined that the works referenced are not directly related to the submitted manuscript. As such, please note that it is not necessary or expected to cite the works requested by the reviewer. 

Please submit your revised manuscript by Apr 21 2024 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.

Please include the following items when submitting your revised manuscript:

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If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter.

If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols.

We look forward to receiving your revised manuscript.

Kind regards,

Miquel Vall-llosera Camps

Staff Editor

PLOS ONE

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[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #2: Yes

Reviewer #3: Yes

Reviewer #4: Partly

**********

2. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #2: Yes

Reviewer #3: Yes

Reviewer #4: I Don't Know

**********

3. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #2: Yes

Reviewer #3: Yes

Reviewer #4: Yes

**********

4. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #2: Yes

Reviewer #3: Yes

Reviewer #4: No

**********

5. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: Dear authors, You are doing well

Please track the requested revisions on the attached file. Your good tracking and revising all the comments to create the manuscript is so suitable for the publication

Reviewer #2: The article is well written and scientifically correct, I have just 2 minor comments

1- Write, ‘..to be used as donor and recipient, respectively.’

2- First paragraph of discussion, write “..The rapid dissemination of ARGs among bacterial species occurs through HGT.’

Reviewer #3: General:

• The manuscript investigates the role of certain antiemetics and antispasmodics in disseminating antibiotic-resistance genes among pathogenic E. coli in the gastrointestinal tract. It presents an important study on the effect of non-antibiotic pharmaceuticals on the conjugal transfer of resistance genes.

• No line numbers and it wasn't easy to review.

• Maybe authors could use the word antimicrobial instead of antibiotics to improve breadth and context.

• The manuscript could be further improved by improving English language usage.

• It would have been great if the authors had explained the selection criteria for the non-antibiotic pharmaceuticals studied and their relevance to antibiotic resistance.

Specific issues

Abstract:

1. Check all abbreviations have a full form. For example, the word GIT is written only in abbreviated form.

Introduction:

• The meaning of the sentence:... Surprisingly, it was recently documented that the consumption of non-antibiotic prescribed drugs represents about ninety fifth of the drug market [14],…." is confusing.

Please use more technical words like detection rate, prevalent, rather than ….." are highly detected [18]."

• The existing knowledge on the role of antiemetics and antispasmodics on antimicrobial resistance development and how the current study is going to fill the existing knowledge gap isn't clear.

Discussion:

• More emphasis is given to antibiotics rather than antiemetics and antispasmodics, especially in the first paragraph.

• Some sentences lack citation. For example: "The previous result agrees with what was achieved in the present work for tiemonium methylsulfate, which caused a slight increase in conjugal transfer between E. coli isolates."

• I recommend further elaborating on the mechanisms by which metoclopramide HCl enhances the conjugal transfer of resistance genes and the implications of these findings in a clinical setting.

Reviewer #4: 1. Which standard protocols were used by authors for MIC?

2. English editing is highly recommended by a native speaker. Some part is difficult to understand.

3. All figure legends must be clear and informative.

4. Table 1 is not necessary. Put it in Suppl. Files

5. In figure 1: Which culture method used?

6. Figure 6: the plasmid band is vague. replace with better fig.

6. Figure 7: The quality is poor. the bar should be added for TEM.

**********

6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: No

Reviewer #2: Yes: Mohamed Salah Abbassi

Reviewer #3: No

Reviewer #4: Yes: Abdollah Derakhshadeh

**********

[NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.]

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.

Attachment

Submitted filename: PONE-May-25-2023-Revsisions.pdf

pone.0304980.s003.pdf (1.3MB, pdf)

Decision Letter 1

Farah Al-Marzooq

29 Apr 2024

PONE-D-23-09629R1Role of Some Antiemetics and Antispasmodics in the dissemination of antibiotic resistance genes among intestinal pathogenic Escherichia coliPLOS ONE

Dear Dr. Abd El-Baky,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

Please submit your revised manuscript by Jun 13 2024 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.

Please include the following items when submitting your revised manuscript:

  • A rebuttal letter that responds to each point raised by the academic editor and reviewer(s). You should upload this letter as a separate file labeled 'Response to Reviewers'.

  • A marked-up copy of your manuscript that highlights changes made to the original version. You should upload this as a separate file labeled 'Revised Manuscript with Track Changes'.

  • An unmarked version of your revised paper without tracked changes. You should upload this as a separate file labeled 'Manuscript'.

If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter.

If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols.

We look forward to receiving your revised manuscript.

Kind regards,

Farah Al-Marzooq, MD, PhD

Academic Editor

PLOS ONE

Journal Requirements:

Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice.

[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation.

Reviewer #1: All comments have been addressed

Reviewer #3: (No Response)

**********

2. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #3: Partly

**********

3. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #3: N/A

**********

4. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #3: Yes

**********

5. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #3: No

**********

6. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: Dear authors. You are doing well. The manuscript is worthy publication. Hope the scientific progression

Reviewer #3: General comments

• A thorough proofreading by a native English speaker or professional editor is recommended to refine the language. A few typographical errors and grammatical issues throughout the text need correction. For instance, consistency in the use of terminology such as "non-antibiotics" versus "non-antibiotic pharmaceuticals" should be addressed. The words antibiotic and antimicrobial are both used interchangeably in the manuscript. Use one term/word consistently to explain one thing. Some sentences are overly complex and could be simplified for better readability.

Title and abstract

• Title: The current title could be revised for improvement. A proposed revision might be: "Influence of Selected Non-Antibiotic Pharmaceuticals on Antibiotic Resistance Gene Transfer in Escherichia coli."

Introduction

• The introduction outlines the background and the significance of the research. It would enhance the manuscript to include a brief explanation of previous studies directly linking non-antibiotic pharmaceuticals with conjugative transfer, providing a stronger justification for the current study.

• Line 80: the words prevalent and rate are the same here. Use detection rate or prevalent.

Materials and methods

• Line 109: what does “Raw materials” refer to?

• Line 109-113: in some instances, product numbers are indicated in parenthesis, while in others, the country where the product is made is indicated. Please revise and follow the journal guidelines.

Results

• Was there any dose-based response? If applicable, describe the dose-response relationships and whether a threshold effect is observed for the pharmaceuticals under study.

Discussion

• The entire discussion is written as one paragraph, making it difficult to follow the points. Please revise the discussion part by making each main point a paragraph.

• The discussion effectively ties the results back to the broader implications of antibiotic resistance. Expanding on the molecular mechanisms potentially involved in the observed effects could enrich the discussion. For example, are there known interactions at the cellular or molecular level between the pharmaceuticals studied and bacterial cell membranes or DNA transfer machinery?

**********

7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: Yes: Mushtak T.S.Al-Ouqaili

Reviewer #3: No

**********

[NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.]

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.

Attachment

Submitted filename: round_2_comments.docx

pone.0304980.s005.docx (17.9KB, docx)
PLoS One. 2024 Jun 21;19(6):e0304980. doi: 10.1371/journal.pone.0304980.r004

Author response to Decision Letter 1


14 May 2024

General comments: A thorough proofreading by a native English speaker or professional editor is recommended to refine the language. A few typographical errors and grammatical issues throughout the text need correction. For instance, consistency in the use of terminology such as "non-antibiotics" versus "non-antibiotic pharmaceuticals" should be addressed. The words antibiotic and antimicrobial are both used interchangeably in the manuscript. Use one term/word consistently to explain one thing. Some sentences are overly complex and could be simplified for better readability. "non-antibiotics" versus "non-antibiotic pharmaceuticals" is addressed. One term/word is used consistently to explain one thing

Title and abstract

Title: The current title could be revised for improvement. A proposed revision might be: "Influence of Selected Non-Antibiotic Pharmaceuticals on Antibiotic Resistance Gene Transfer in Escherichia coli." Done. We changed the title to the proposed one

Introduction

The introduction outlines the background and the significance of the research. It would enhance the manuscript to include a brief explanation of previous studies directly linking non-antibiotic pharmaceuticals with conjugative transfer, providing a stronger justification for the current study. Done

Line 80: the words prevalent and rate are the same here. Use detection rate or prevalent. Done

Materials and methods

Line 109: what does “Raw materials” refer to? Refer to the used antibiotics. It is deleted

Line 109-113: in some instances, product numbers are indicated in parenthesis, while in others, the country where the product is made is indicated. Please revise and follow the journal guidelines. Done

Results

Was there any dose-based response? If applicable, describe the dose-response relationships and whether a threshold effect is observed for the pharmaceuticals under study. Yes and it is described in the result section

Discussion

The entire discussion is written as one paragraph, making it difficult to follow the points. Please revise the discussion part by making each main point a paragraph. Done

The discussion effectively ties the results back to the broader implications of antibiotic resistance. Expanding on the molecular mechanisms potentially involved in the observed effects could enrich the discussion. For example, are there known interactions at the cellular or molecular level between the pharmaceuticals studied and bacterial cell membranes or DNA transfer machinery? Yes and the interactions at the cellular or molecular level between the pharmaceuticals and DNA transfer is discussed in the Discussion section

Attachment

Submitted filename: Response 2 to reviewers (1).docx

pone.0304980.s006.docx (14.6KB, docx)

Decision Letter 2

Farah Al-Marzooq

22 May 2024

Influence of Selected Non-Antibiotic Pharmaceuticals on Antibiotic Resistance Gene Transfer in Escherichia coli

PONE-D-23-09629R2

Dear Dr. Abd El-Baky,

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.

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Kind regards,

Farah Al-Marzooq, MD, PhD

Academic Editor

PLOS ONE

Additional Editor Comments (optional):

Reviewers' comments:

Acceptance letter

Farah Al-Marzooq

30 May 2024

PONE-D-23-09629R2

PLOS ONE

Dear Dr. Abd El-Baky,

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now being handed over to our production team.

At this stage, our production department will prepare your paper for publication. This includes ensuring the following:

* All references, tables, and figures are properly cited

* All relevant supporting information is included in the manuscript submission,

* There are no issues that prevent the paper from being properly typeset

If revisions are needed, the production department will contact you directly to resolve them. If no revisions are needed, you will receive an email when the publication date has been set. At this time, we do not offer pre-publication proofs to authors during production of the accepted work. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few weeks to review your paper and let you know the next and final steps.

Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org.

If we can help with anything else, please email us at customercare@plos.org.

Thank you for submitting your work to PLOS ONE and supporting open access.

Kind regards,

PLOS ONE Editorial Office Staff

on behalf of

Dr. Farah Al-Marzooq

Academic Editor

PLOS ONE

Associated Data

    This section collects any data citations, data availability statements, or supplementary materials included in this article.

    Supplementary Materials

    S1 File

    (DOCX)

    pone.0304980.s001.docx (16.3KB, docx)
    S2 File

    (XLSX)

    pone.0304980.s002.xlsx (28.3KB, xlsx)
    Attachment

    Submitted filename: PONE-May-25-2023-Revsisions.pdf

    pone.0304980.s003.pdf (1.3MB, pdf)
    Attachment

    Submitted filename: Response to reviewers (6).docx

    pone.0304980.s004.docx (18.2KB, docx)
    Attachment

    Submitted filename: round_2_comments.docx

    pone.0304980.s005.docx (17.9KB, docx)
    Attachment

    Submitted filename: Response 2 to reviewers (1).docx

    pone.0304980.s006.docx (14.6KB, docx)

    Data Availability Statement

    All relevant data are within the manuscript and its Supporting information files.


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