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. 2024 Jun 26;19(6):e0306278. doi: 10.1371/journal.pone.0306278

Neurocognitive profile in HIV subjects on INSTI-regimen- one year follow up: Is there room for optimism?

Nina Brkić-Jovanović 1,*, Mina Karaman 1, Vanja Andrić 2, Daniela Marić 2, Snežana Brkić 2, Vojislava Bugarski-Ignjatović 1
Editor: Lucette A Cysique3
PMCID: PMC11207154  PMID: 38923982

Abstract

The introduction of antiretroviral therapy (ART) has successfully changed the clinical course of people with HIV, leading to a significant decline in the incidence of HIV-related neurocognitive disorders. Integrase strand transferase inhibitors (INSTI) are recommended and preferred first-line ART for the treatment of HIV-1 infection in ART-naïve subjects. This type of therapy regimen is expected to have higher CNS penetration, which may bring more cognitive stability or even make significant cognitive improvement in people with HIV. The study aimed to follow up on neurocognitive performance in HIV subjects on two types of INSTI therapy regimens at two-time points, one year apart. The study sample consisted of 61 ART naïve male participants, of which 32 were prescribed raltegravir (RAL) and 29 dolutegravir (DTG). There was no significant difference between subsamples according to the main sociodemographic (age, education level) and clinical characteristics (duration of therapy, nadir CD4 cells level, CD4 cells count, CD8 cells, CD4/CD8 ratio). For neurocognitive assessment, six measures were used: general cognitive ability (MoCA test), verbal fluency (total sum score for phonemic and category fluency), verbal working memory (digit span forward), cognitive capacity (digit span backwards), sustained attention (Color Trail Test 1), and divided attention (Color Trail Test 2). In both therapy groups (RAL and DTG), there was no significant decrease in neurocognitive achievement on all used measures over a one-year follow-up in both therapy groups. A statistically significant interactive effect of time and type of therapy was found on the measure of divided attention—DTG group showed slight improvement, whereas RAL group showed slight decrease in performance. During the one-year follow-up of persons on INSTI-based regimen, no significant changes in cognitive achievement were recorded, which suggests that the existing therapy can have a potentially positive effect on the maintenance of neurocognitive achievement.

Introduction

The epidemiology of HIV infection in Serbia is similar to that in developed countries, with an average age of patients around 50 years, predominantly infected MSM population [1]. With the successful peripheral suppression of HIV after the introduction of antiretroviral therapy (ART), HIV disease has changed its course. It now represents a chronic disease, with most patients reaching senior age [2, 3]. In these patients, ageing-associated comorbidities, especially in cognitive functioning, play a central role in the overall quality of life [2].

Recent studies have shown that HIV enters the central nervous system (CNS) in the first few days after transmission and causes an acute inflammatory reaction in the brain, promptly limited by the introduction of ART [4]. There are several ways in which HIV infection is compartmentalised in the CNS. Besides the persistence of the virus in microglia cells and macrophages, parts of the virus can cause the persistence of inflammation and neurodegeneration. Thus, the virus only triggers the inflammatory response in the brain, which is afterwards maintained in the form of low-level neuroinflammation of the microglia and macrophages, resulting in continuous and diffuse neuronal death or dysfunction and leading to a certain level of neurodegeneration [3, 5]. With the ageing of people with HIV (PWH), this form of neurodegeneration is combined with the physiological ageing of the brain, most probably synergistically [6, 7]. This type of brain ageing is referred to as accentuated and is not specific to HIV infection [4].

The concept of modern treatment for HIV infection consists of the prompt introduction of ART. Irrespective of nadir CD4 or as soon possible, the combination of drugs is designed to allow successful peripheral viral suppression and perform beneficial effects on halting the damage in the CNS [8, 9]. Integrase strand transferase inhibitors (INSTI) nowadays are recommended third agents in the treatment of HIV infection [10]. Due to their favourable side effect profile, limited drug-drug interactions, and virologic potency, INSTI-based regimens are now among the recommended and preferred first-line ART for the treatment of HIV-1 infection in ART-naïve patients. Dolutegravir is a second-generation INSTI with some advantages compared to other available antiretroviral agents [1113]. Raltegravir is the first HIV-integrase inhibitor approved by the FDA for the treatment of HIV infection [14].

INSTI are influential inside the cell by preventing the integration of proviral DNA in the cell genome. They are expected to be more successful in preserving CNS reservoirs, enabling a reduced effect in relation to the patient’s neurocognitive condition [15]. Also, with the ART regimen, the incidence of HIV-associated neurocognitive disorders (HAND) has started to decline, primarily in severe forms of HAND, such as HIV-associated dementia (HAD) [1618]. The benefits of ART can be seen in the improvement of neurocognitive performance in more than 40% of individuals with HAD [18].

However, a milder form of HAND still remains. It persists in 15–55% of people with HIV in the ART era, mainly in the form of asymptomatic neurocognitive impairment (ANI) and mild neurocognitive disorder (MND) [1921]. Typically, HAND includes executive dysfunction and memory impairment with prominent disruption of attention, multitasking, impulse control, judgement and memory encoding and retrieval [22]. HAND can also be associated with motor dysfunction, including bradykinesia, loss of coordination and gait disturbances [22]. In the pre-ART era, dominant neurocognitive impairments were deficits in psychomotor speed, motor dysfunction such as gait disturbances, and memory impairment [23]. In the current ART era, HAND presents as a mixed pattern of cortical and subcortical deficits with most impairment in executive function, learning and working memory [24].

HAND in PWH has several possible pathogenic mechanisms, including poor drug concentration of antiretrovirals in CNS, the legacy effect of CNS damage sustained during early stages of HIV infection of the brain, antiretroviral neurotoxicity, persistent brain immune activation, and comorbidities such as cerebrovascular disease, syphilis, and hepatitis C co-infection [2528]. Besides HIV-related factors, some sociodemographic characteristics such as older age, race, and education level [23] and depression [22] may influence the likelihood of developing HAND [15]. Also, the type of therapy regimen can influence neurocognitive performance, where ART regimens with higher versus lower CNS penetration may affect more significant cognitive improvement in individuals with HAD [29].

HAND generally remains stable during ART but rarely resolves completely [20]. One 4-year follow-up study of ART-treated individuals demonstrated that 77% remained neurocognitively stable, with only 13% deteriorating to a more severe form of HAND and 10% improving [30]. Thus, HAND is typically not progressive in most aviraemic PWH on ART [20]. The fact that lower CD4+ T cell nadir is one of the risk factors for HAND suggests that earlier HIV treatment to prevent severe immunosuppression could reduce the severity of HAND [31]. Also, a recent study suggests that ART initiation very shortly after HIV acquisition results in a more significant improvement in PWH neurocognitive performance over time compared to deferred ART treatment 24 weeks later [17].

Based on the current knowledge, the present study aimed to follow up on neurocognitive performance in PWH on two types of ART therapy regimens (INSTI) at two-time points, one year apart.

Method

A longitudinal, comparative and correlational research design survey was applied from September 2021 to September 2023 to a convenience sample of persons with HIV who have been on INSTI-based therapy since the beginning of treatment. Repeated measurements were carried out one year apart, and comparing the participants to the baseline observed in the first test was possible.

Sample and setting

The study was conducted at the Clinical Center of Vojvodina, Novi Sad, Republic of Serbia. The studied sample consisted of 61 PWH who received INSTI-based treatment. The sample consisted of 61 male participants, of which 32 were prescribed raltegravir (RAL) and 29 dolutegravir (DTG) as part of the therapy for HIV. All participants were INSTI naïve, starting therapy as soon as possible after diagnosis. In order to participate in the study, participants had an undetectable viral load at least 6 months before the baseline test. The exclusion criteria were the history of neurological or psychiatric illnesses, taking any medications that are not related to HIV therapy and comorbidities known to influence cognitive performance (diabetes, hepatitis C, thyroid and cardiovascular diseases). All participants underwent a 60-minute neurocognitive test battery at two-time points (baseline and second assessments), one year apart, which tested their achievement in different neurocognitive domains.

Using analytics calculators sample size software for multiple regression, a sample size of 31 participants is required for a 95% confidence interval, with expected small effect size of 0.35 and a margin of error of 0.05, with 2 predictor variables and 0.8 statistical power. The number of people living with HIV in Vojvodina is relatively small, and with the mentioned criteria for inclusion and exclusion from the study, this number of 62 respondents represents the entire population.

Ethics approval and consent to participate

The implementation of this study was approved by the Ethics Committee of the Faculty of Medicine, the University of Novi Sad, Serbia (01-39/60/1) and Ethics Commission of The Clinical Center of Vojvodina (00-144/6/21). The study was conducted in compliance with the Helsinki Convention principles. Participation in the study was voluntary. All participants signed a written consent and were informed of the study’s objectives. Anonymous answers guaranteed data confidentiality.

Variables and instruments

Sociodemographic (age, education level) and clinical data (duration of therapy, nadir CD4 cells level, CD4 cells count, CD8 cells, CD4/CD8 ratio, type of INSTI (RAL/DTG) were collected from patients’ medical records.

  1. Neurocognitive assessment comprises several neuropsychological tests. The Montreal Cognitive Assessment test (MoCA) is a widely used screening assessment) for detecting cognitive impairment. This test consists of 30 points and takes 10 minutes for the individual to complete. The MoCA assesses several cognitive domains: short-term memory recall tasks, visuospatial abilities, attention, concentration and working memory, executive functions, language, abstract reasoning and orientation [32]. We used the MoCA general score as a continuous variable to measure overall cognitive performance for further analysis. We used the MoCA test as a screening tool for HAND among PWH, with a cutoff score of 23.

  2. Verbal fluency test, which was measured using the Phonemic Fluency Test, including phonemes S/K/L in the Serbian language equivalent to the Verbal Fluency Test (FAS) in the English language [33], and the “Animals” subtest from the Boston Diagnostic Aphasia Exam [34]. In further analysis, we use the composite and standardised score for phonemic and category fluency as continuos variables.

  3. Attention/Working memory was measured using the Wechsler Memory Scale-Revised [35]. We used the subtest Digit span—forward test to measure verbal working memory and attention and the Digit span—backwards test to measure cognitive capacity. We used the general score as a continuous variable to measure performance on these variables, where a higher score indicates a better achievement.

  4. The Color Trails Test (CTT) is a language-free version of the Trail Making Test (TMT) that was developed to allow for broader cross-cultural application to measure sustained attention (CTT 1) and divided attention (CTT 2) in adults [36]. We used time reaction as a continuous variable to measure performance on these variables, where a higher score indicates a lower achievement.

Six measures from these tests were used in a study analysis as a measure of general cognitive ability (MoCA test), verbal fluency (composite and standardised score for phonemic and category fluency), verbal working memory (digit span forward), cognitive capacity (digit span backwards), sustained attention (time reaction on CTT 1) and divided attention (time reaction on CTT 2).

Statistical analysis

Frequency and percentage displays were used to represent a specific category of answers to analyse and describe the sample structure by relevant variables. Statistical analysis was conducted using SPSS (IMB V.26), specifically descriptive statistics, Pearson correlations, t-tests, and MANCOVA. Given that two different scales were used to measure verbal fluency, the composite variable was formed first by converting raw scores into z-scores. The individual z-scores were then summed and divided by 2 to obtain an average composite score, which was then converted to a T-score (T (50,10)).

In the applied tests, the limit values of the risk probability are at the significance level of 95% (p<0.05) (difference in statistical parameters significant) and 99% (p<0.01) (difference in statistical parameters highly significant). Preliminary analyses of the effects of the age and duration of therapy were performed to determine whether potential correlations should be considered in further statistical analysis. The strength of the linear relationship between the duration of therapy and performance in neurocognitive domains was tested using Pearson’s correlation coefficient separately for two testing moments.

Results

The Pearson coefficient was applied to examine the correlation of sociodemographic variables and backbone therapy with neurocognitive measures. Preliminary testing was done to verify the normality, linearity, univariate and multivariate outliers, homogeneity of variance and covariance, and multicollinearity of variables.

In order to verify the connection between age, education and duration of therapy with neurocognitive measures, correlation coefficients were conducted. The participants were selected to all have at least a high school education, an average of 13.43 educational years. The age in the sample varied from 22 to 68, with an average age of 38.32 years. Duration of the therapy for HIV varied from 21 to 71 months, with an average of 41 months of treatment.

Since back bone therapy can affect neurocognitive achievements, we used and checked this as a controlling variable. Three types of backbone therapy were represented: tenofovir (40, 66.7%), abacavir (13, 21.7%) and lamivudine (7, 11.7%).

Bivariate correlation tests showed no significant correlations between age, therapy duration, education level, backbone therapy and neurocognitive measures (Table 1).

Table 1. Bivariate correlation between age, education level, duration of the therapy and neurocognitive measures.

Neurocognitive measures MOCA Verbal Fluency Verbal working memory Cognitive capacity Sustained attention Divided attention
Age -.233 -.190 -.150 -.135 .246 .097
Therapy duration -.087 -.065 -.106 -.052 .155 .236
Education level .211 .128 .072 .081 .147 .248
Backbone therapy .128 .165 .052 .120 -.076 -.098

To check the potential effect of infection progression through nadir CD4 cells (nCD4) as an indicator in two groups of PWH on two types of therapy, we conducted a t-test for independent samples. The results show that the subjects on RAL do not differ significantly from the subjects on DTG in the number of nCD4 cells, and we can consider them equal in terms of that parameter (t(58) = 1.171, p = 0.246).

The average scores on every measure, dependent on the therapy prescribed and the time of assessment, are shown in Table 2.

Table 2. Descriptive statistics based on type of therapy and time of assessment.

Baseline assessment Second assessment
Neurocognitive measures Therapy Mean SD Mean SD
MOCA Raltegravir 25.39 3.64 26.20 2.56
Dolutegravir 26.08 2.56 26.30 2.00
Verbal Fluency Raltegravir 49.17 16.83 47.21 13.66
Dolutegravir 50.90 16.43 52.08 20.18
Verbal working memory Raltegravir 6.75 1.10 6.60 0.91
Dolutegravir 6.58 1.15 6.95 0.75
Cognitive capacity Raltegravir 4.62 1.33 5.00 1.25
Dolutegravir 4.51 0.98 4.50 1.10
Sustained attention Raltegravir 43.51 15.95 32.35 10.55
Dolutegravir 36.20 12.84 37.10 12.00
Divided attention Raltegravir 87.83 30.33 80.13 25.79
Dolutegravir 69.37 28.92 83.60 23.47
CD4 cells Raltegravir 1182.74 490.08 1039.43 426.14
Dolutegravir 998.75 469.96 995.44 424.65
CD8 cells Raltegravir 1369.22 634.32 1184.14 475.44
Dolutegravir 1471.79 519.50 1415.00 581.09
CD4/CD8 ratio Raltegravir 1.33 2.25 1.03 0.27
Dolutegravir 1.07 1.87 0.77 0.39

In order to check the representation of HAND in the sample at the baseline assessment and in the second assessment, we used the MoCA test because recent studies indicate that it is a "reasonable screening tool" for HAND among PWH, with a cutoff score of 23 as an optimal balance in relation to sensitivity and specificity [37]. According to this criterion, in the baseline assessment, 8 participants met the criteria for HAND. In the second assessment, there were 3 participants with HAND, which shows that although there are no statistically significant differences in the score on the MoCA test, there is still a slight improvement.

To test significant changes in the neurocognitive achievement of PWH during INSTI therapy of DTG and RAL, MANCOVA repeated measure was conducted, controlling the duration of the therapy, for every neurocognitive measure: MOCA, verbal working memory, cognitive capacity, sustained attention, divided attention, and verbal fluency. Additionally, changes in CD4 cells and CD8 cells were also tested. A statistically significant interactive effect of time and type of therapy was found on a measure of divided attention (F (6, 71) = 9.16, p = .005; partial eta squared = .223) (Table 3).

Table 3. MANCOVA’s main and interactive effect results.

Test Effect F p Partial eta
MOCA Time .119 .733 .004
Time * type of therapy .319 .576 .010
Verbal Fluency Time .450 .507 .014
Time * type of therapy .970 .332 .029
Verbal working memory Time .333 .568 .010
Time * type of therapy 1.212 .279 .036
Cognitive capacity Time .881 .355 .027
Time * type of therapy 2.047 .162 .060
Sustained attention Time .750 .393 .023
Time * type of therapy .239 .628 .007
Divided attention Time 1.163 .289 .035
Time * type of therapy 9.164 .005 .223
CD4 cells Time 3.145 .082 .058
Time * type of therapy 2.317 .207 .031
CD8 cells Time .062 .804 .001
Time * type of therapy .349 .557 .007
CD4/CD8 ratio Time .037 .848 .001
Time * type of therapy .153 .698 .004

Scheffe’s post-hoc test yielded no significant differences in individual variable contributions (Table 4).

Table 4. Scheffe post-hoc.

Variable A Variable B Mean difference (A-B) SE t p
Raltegravir, 1 Dolutegravir, 1 18.13 9.944 1.82 0.35
Raltegravir, 2 12.89 6.740 1.91 0.31
Dolutegravir, 2 3.65 9.88 0.37 0.98
Dolutegravir, 1 Raltegravir, 2 -5.23 9.88 -0.53 0.96
Dolutegravir, 2 -14.47 5.80 -2.49 0.12
Raltegravir, 2 Dolutegravir, 2 -9.23 9.94 -0.92 0.83

Raltegravir 1 –a group of participants on RAL baseline assessment; Raltegravir 2 –a group of participants on RAL second assessment; Dolutegravir 1 –a group of participants on DTG baseline assessment; Dolutegravir 2 –a group of participants on DTG second assessment

Fig 1 indicates that DTG group showed slight improvement on the divided attention measure, whereas the RAL group showed slight decrease in performance.

Fig 1. Interactive effect of time and type of therapy on divided attention measure.

Fig 1

Discussion and conclusions

This study aimed to follow up on neurocognitive performance in PWH on two types of INSTI-based ART at two time points, one year apart. We analysed this general goal through two specific ones to determine the neurocognitive functioning of PWH who are on INSTI-based regimen and to verify the existence of changes in neurocognitive functioning over time, depending on the type of integrase inhibitor they are taking (RAL/DTG) and the duration of therapy.

We found no correlation of neurocognitive achievement with age, education level, backbone therapy and duration of treatment. The results also show no significant decrease in neurocognitive achievement on the MOCA, verbal working memory, cognitive capacity, sustained attention, divided attention, and verbal fluency measures over one-year follow-up. Also, no differences were observed in the effect of the therapy they are taking on any of the measures of neurocognitive functioning. A statistically significant interactive effect of time and type of therapy was found on the measure of divided attention, where we found that the DTG group slightly improved on the divided attention test, whereas the RAL group showed a slight decrease in performance on the same test. We also measured changes in the number of CD4 and CD8 cells and the inflammation parameter CD4/CD8 ratio. The results showed no decrease in the number of lymphocytes and the coefficient of inflammation, regardless of the type of ART the participants were taking.

In earlier research, it was shown that sociodemographic characteristics such as older age and, consequently, prolonged use of HIV therapy [23] may influence the likelihood of developing lower neurocognitive capacity [1]. In our research, this connection was not observed. However, the follow-up was limited to one year. These results support the idea that using INSTI-based regimen can make some cognitive improvements in PWH individuals [29]. Although the results from our study are in accordance with the previously mentioned optimistic perspective, we should be aware that the one-year follow-up period is not long enough to observe the cumulative effect of age and HIV-related neurodegeneration.

The fact that there are no significant differences in the neurocognitive functioning of PWH in any of the assessed measures during repeated measurements supports the assumption that with the ART regimen, the occurrence of HIV-associated neurocognitive disorders is less frequent and less intense [16, 17]. In our study, neurocognitive capacity remains stable on INSTI-based regimen.

RTG is the first HIV-integrase inhibitor approved by FDA for the treatment of HIV infection [14]. DTG is a second-generation INSTI with some advantages compared to other available antiretroviral agents [1113], and we tried to find out whether there are differences in the effects of different types of INSTI-based regimen on the neurocognitive functioning of PWH. Our results indicate that both types of therapy are equally effective and keep a person’s neurocognitive functioning stable. These results agree with other studies that also found that INSTI-based ART regimens were highly effective, with no significant differences between any of the INSTIs. In addition, side effects were rarely observed and were very mild [38].

When observing the interaction effect of the type of therapy and time point of assessment, we saw that it was statistically significant on the measure of divided attention, DTG group showed slight improvement, whereas the RTG group showed a slight decrease in performance.

These findings are in agreement with some studies that claim there is a trend towards improvement of neurocognitive function in HIV-positive treatment patients who receive three months of DTG-based ART [39]. At the same time, different studies warn of the harmful effects of DTG through an increase in body weight and consequent increase in peripheral inflammation and the occurrence of metabolic syndrome in PWH [40], and it is necessary to conduct additional studies with a multi-year follow-up.

We used the MoCA general score to measure overall cognitive performance as a screening tool for HAND among PWH. The MoCA also assesses several cognitive domains: short-term memory recall tasks, visuospatial abilities, attention, concentration and working memory, executive functions, language, abstract reasoning, and orientation. Therefore, a recommendation for future research would be to examine the differences in relation to those specific domains.

Some limitations of this study include the small sample size, especially patients with HAND, where all participants were males and without comorbidities. Also, the duration of therapy in patients until baseline testing is not uniform. Although in the research, we statistically controlled the effect of the duration of the therapy, there is room for improving the study in relation. To obtain the most reliable results, the subjects included in the study were uniform in relation to their level of education. Also, all participants had good health status and HIV infection under control and undetectable virus via PCR test. By opting for a highly selected sample (in the sense of controlling all comorbidities that affect cognition and equalising socio-demographic characteristics), it is possible that we "lost" part of the information about the research problem because we did not include those PWH who have low education, with comorbid diseases and poor health status and condition.

This study was designed as a pilot proof of concept study because we have only a one-year follow-up, which is a relatively short period to make explicit assumptions about the effect of both types of INSTI on neurocognitive performance. We plan to conduct a longitudinal study with the same goal.

In this study, we also monitored the effects of the duration of therapy. Still, the limitation was that we did not assess participants’ neurocognitive performance before beginning INSTI-based treatment and dosage of INSTI treatment. Although we have shown that with INSTI treatment, there is no significant worsening of neurocognitive status, the question remains whether INSTI drug regimens can protect or treat mild HIV-associated neurocognitive disorder.

Nonetheless, this is the first longitudinal study in Serbia aiming to explore HIV-associated neurocognitive impairment at more than one-time point and also the first study exploring the effects of duration and type of INSTI-based treatment.

Notwithstanding the limitations, our findings are consistent with recommendation that the second generation INSTI regimen has no or negligible influence on the neurocognitive functioning of PWH. Also, it is essential in theoretical and practical cross-cultural approaches to understand HIV infection and treatment in relation to the neurocognitive functioning of PWH, giving the basis to assume that both therapies from the INSTI group have the same effect on the neurocognitive functioning of PWH.

Supporting information

S1 File

(SAV)

Data Availability

All relevant data are within the manuscript and its Supporting information files.

Funding Statement

This work is supported in part by a research grant from the Investigator-Initiated Studies Program of Merck Sharp & Dohme doo.

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Decision Letter 0

Lucette A Cysique

30 Apr 2024

PONE-D-24-09779NEUROCOGNITIVE PROFILE IN HIV SUBJECTS ON INSTI-REGIMEN- ONE YEAR FOLLOW UP: IS THERE ROOM FOR OPTIMISM?PLOS ONE

Dear Dr. Brkic-Jovanovic,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please make sure to address the requirements for extra details from the reviewers.

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We look forward to receiving your revised manuscript.

Kind regards,

Lucette A Cysique, PhD

Academic Editor

PLOS ONE

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   "This work is supported in part by a research grant from the Investigator-Initiated Studies Program of Merck Sharp & Dohme doo."

Please state what role the funders took in the study.  If the funders had no role, please state: "The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript." 

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[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Partly

Reviewer #2: Partly

**********

2. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #2: Yes

**********

3. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #2: Yes

**********

4. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #2: Yes

**********

5. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: This is an interesting study. The major limitations are the short time frame for repeat testing, the small number of patients with HAND and the lack of any power analyses to address the issue of whether INSTI drug regimens can protect or treat mild HIV associated neurocognitive disorder

Reviewer #2: PONE-D-24-09779 compared the effects of RAL and DTG on neurocognition among newly diagnosed PWH during a one-year follow-up. The conclusion was no significant difference between these regimens. In general, the MS was well written with sound introduction, detailed statistical analyses, and discussion. My comments are brief on certain critical information that is missing in the MS.

1. The concurrent drug use including substances should be included. Certain medications and many substances have a direct impact on neurocognition. Thus, this information is critical.

2. The sample size calculation is missing. It is unclear how this sample size in each group was determined to detect the difference in cognition between the study groups. At least a discussion of power analysis should be provided.

3. A discussion of additional domain specific cognitive assessment to MoCA should be considered, particularly the rationales and benefits from those assessments.

4. The details of RAL and DTG are missing, including dosage, treatment interval and drug combinations.

**********

6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

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Reviewer #1: No

Reviewer #2: Yes: Qing Ma

**********

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PLoS One. 2024 Jun 26;19(6):e0306278. doi: 10.1371/journal.pone.0306278.r002

Author response to Decision Letter 0


14 May 2024

Response to Reviewers

Journal Requirements:

When submitting your revision, we need you to address these additional requirements.

1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at

https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and

https://journals.plos.org/plosone/s/file?id=ba62/PLOSOne_formatting_sample_title_authors_affiliations.pdf

The complete work has now been prepared according to the instructions in the sent documents. Thanks for the suggestions.

2. Please note that funding information should not appear in any section or other areas of your manuscript. We will only publish funding information present in the Funding Statement section of the online submission form. Please remove any funding-related text from the manuscript.

Funding information has been removed from the manuscript.

3. We note that the grant information you provided in the ‘Funding Information’ and ‘Financial Disclosure’ sections do not match.

When you resubmit, please ensure that you provide the correct grant numbers for the awards you received for your study in the ‘Funding Information’ section.

Thanks for the correction; we have corrected the error.

4. Thank you for stating the following financial disclosure:

"This work is supported in part by a research grant from the Investigator-Initiated Studies Program of Merck Sharp & Dohme doo."

Please state what role the funders took in the study. If the funders had no role, please state: "The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript."

If this statement is not correct you must amend it as needed.

Please include this amended Role of Funder statement in your cover letter; we will change the online submission form on your behalf.

We have supplemented the statement in the requested manner.

5. For studies involving third-party data, we encourage authors to share any data specific to their analyses that they can legally distribute. PLOS recognizes, however, that authors may be using third-party data they do not have the rights to share. When third-party data cannot be publicly shared, authors must provide all information necessary for interested researchers to apply to gain access to the data. (https://journals.plos.org/plosone/s/data-availability#loc-acceptable-data-access-restrictions)

For any third-party data that the authors cannot legally distribute, they should include the following information in their Data Availability Statement upon submission:

1) A description of the data set and the third-party source

2) If applicable, verification of permission to use the data set

3) Confirmation of whether the authors received any special privileges in accessing the data that other researchers would not have

4) All necessary contact information others would need to apply to gain access to the data

I once again checked the issue of the possibility of sharing and having open data.

The results of the study of which this paper is a part exist site clinical trials. I am sending the registration statement as a document.

I asked our sponsors and received an answer: “The PI owns the data for this study as it is considered a non-Merck study with the institution as the sponsor. The collected data belong to the Faculty of Medicine research team in Novi Sad. If necessary, we can share the data with the protection of the respondents' personal data.

6. When completing the data availability statement of the submission form, you indicated that you will make your data available on acceptance. We strongly recommend all authors decide on a data sharing plan before acceptance, as the process can be lengthy and hold up publication timelines. Please note that, though access restrictions are acceptable now, your entire data will need to be made freely accessible if your manuscript is accepted for publication. This policy applies to all data except where public deposition would breach compliance with the protocol approved by your research ethics board. If you are unable to adhere to our open data policy, please kindly revise your statement to explain your reasoning and we will seek the editor's input on an exemption. Please be assured that, once you have provided your new statement, the assessment of your exemption will not hold up the peer review process.

Answered in the previous section.

7. Your ethics statement should only appear in the Methods section of your manuscript. If your ethics statement is written in any section besides the Methods, please move it to the Methods section and delete it from any other section. Please ensure that your ethics statement is included in your manuscript, as the ethics statement entered into the online submission form will not be published alongside your manuscript.

We have moved the ethics statement in the Methods section.

Comments to the Author

Reviewer #1: This is an interesting study. The major limitations are the short time frame for repeat testing, the small number of patients with HAND and the lack of any power analyses to address the issue of whether INSTI drug regimens can protect or treat mild HIV associated neurocognitive disorder

Thank you for the positive evaluation. We agree with the study's recognised limitations. We included and emphasised all of the above in the section dealing with the limitations of this research and recommendations for future research.

Reviewer #2: PONE-D-24-09779 compared the effects of RAL and DTG on neurocognition among newly diagnosed PWH during a one-year follow-up. The conclusion was no significant difference between these regimens. In general, the MS was well written with sound introduction, detailed statistical analyses, and discussion. My comments are brief on certain critical information that is missing in the MS.

Thank you for the positive evaluation.

1. The concurrent drug use including substances should be included. Certain medications and many substances have a direct impact on neurocognition. Thus, this information is critical.

Thanks for such a useful suggestion. We entered data on the uniformity of the group in the sense of not taking any additional therapy for diseases other than HIV. We also entered the data and checked the correlations with the backbone therapy that the subjects were taking. There were three types of backbone therapy in the study: tenofovir, abacavir and lamivudine, whose effect was controlled.

2. The sample size calculation is missing. It is unclear how this sample size in each group was determined to detect the difference in cognition between the study groups. At least a discussion of power analysis should be provided.

We included the sample size calculation and the fact that the sample size is one of this research's limitations.

3. A discussion of additional domain specific cognitive assessment to MoCA should be considered, particularly the rationales and benefits from those assessments.

Slazemo se da bi bilo zanimljivo razmatrati specificne domene MoCA testa. U ovom istraživanju smo ovaj test koristili kao trijažni test za pojavu HANDa a određene specifične domene pokrili smo dodatnim testovima u celosti (brojanje, verbal fluency...). Predlog za analizu specificnih domena MoCA testa smo naveli kao preporuku za buduca istrazivanja.

We agree that it would be interesting to consider specific domains of the MoCA test. In this research, we used this test as a triage test for the appearance of HAND, and we covered certain specific domains with additional tests in their entirety (counting, verbal fluency...). We have listed the proposal for analysing specific domains of the MoCA test as a recommendation for future research.

4. The details of RAL and DTG are missing, including dosage, treatment interval and drug combinations.

We included the length of therapy and backbone therapy as control variables in the manuscript.

We do not have data on patient doses, so we have added that to the section on the study's limitations.

Many thanks for the extremely useful suggestions for improving the work.

Attachment

Submitted filename: Response to Reviewers.docx

pone.0306278.s002.docx (19.7KB, docx)

Decision Letter 1

Lucette A Cysique

15 Jun 2024

NEUROCOGNITIVE PROFILE IN HIV SUBJECTS ON INSTI-REGIMEN- ONE YEAR FOLLOW UP: IS THERE ROOM FOR OPTIMISM?

PONE-D-24-09779R1

Dear Dr. Brkic-Jovanovic,

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.

Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication.

An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager® and clicking the ‘Update My Information' link at the top of the page. If you have any questions relating to publication charges, please contact our Author Billing department directly at authorbilling@plos.org.

If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org.

Kind regards,

Lucette A Cysique, PhD

Academic Editor

PLOS ONE

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation.

Reviewer #1: All comments have been addressed

Reviewer #2: All comments have been addressed

**********

2. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #2: Yes

**********

3. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #2: Yes

**********

4. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #2: Yes

**********

5. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #2: Yes

**********

6. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: The authors have adequately addressed the previous issues raised. Therefore I have no further comments

Reviewer #2: Thanks for addressing my comments. The missing information such as dosage did present some challenges, but the discussion of limitations was sufficient for this MS. Also the plan for domain specific analysis was sound. Thanks

**********

7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: No

Reviewer #2: Yes: Qing Ma

**********

Acceptance letter

Lucette A Cysique

18 Jun 2024

PONE-D-24-09779R1

PLOS ONE

Dear Dr. Brkic-Jovanovic,

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now being handed over to our production team.

At this stage, our production department will prepare your paper for publication. This includes ensuring the following:

* All references, tables, and figures are properly cited

* All relevant supporting information is included in the manuscript submission,

* There are no issues that prevent the paper from being properly typeset

If revisions are needed, the production department will contact you directly to resolve them. If no revisions are needed, you will receive an email when the publication date has been set. At this time, we do not offer pre-publication proofs to authors during production of the accepted work. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few weeks to review your paper and let you know the next and final steps.

Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org.

If we can help with anything else, please email us at customercare@plos.org.

Thank you for submitting your work to PLOS ONE and supporting open access.

Kind regards,

PLOS ONE Editorial Office Staff

on behalf of

Dr. Lucette A Cysique

Academic Editor

PLOS ONE

Associated Data

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    Supplementary Materials

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    Attachment

    Submitted filename: Response to Reviewers.docx

    pone.0306278.s002.docx (19.7KB, docx)

    Data Availability Statement

    All relevant data are within the manuscript and its Supporting information files.


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