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. 2024 Jul 2;19(7):e0305899. doi: 10.1371/journal.pone.0305899

Wood duck nest survival and duckling recruitment is minimally affected by interspecific brood parasitism from hooded mergansers and black-bellied whistling-ducks

Dylan L Bakner 1,¤,*, Kevin M Ringelman 1, Larry A Reynolds 2
Editor: Steven E Travis3
PMCID: PMC11218992  PMID: 38954676

Abstract

In the southeastern United States, wood ducks (Aix sponsa) have historically experienced interspecific brood parasitism (IBP) primarily from hooded mergansers (Lophodytes cucullatus), but the recent northward expansion of black-bellied whistling-ducks (Dendrocygna autumnalis) has added a new complexity to these interactions. We monitored nest boxes in Louisiana to evaluate the influence IBP had on wood duck daily nest survival rate (after, DSR) and duckling recruitment. We monitored 1,295 wood duck nests from 2020−2023 and found 112 (8.7%) were parasitized by hooded mergansers and 148 (11.5%) by whistling-ducks. Parasitic egg-laying by hooded mergansers lowered wood duck DSR, while DSR for nests parasitized by whistling-ducks was comparable to clutches containing only wood duck eggs. We considered the wood duck capture histories of 2,465 marked female ducklings and 540 banded adult females to estimate a duckling recruitment probability for the entire study period. We recaptured 50 ducklings as adults; 6 (12.0%) hatched from clutches parasitized by hooded mergansers, 1 (2.0%) from a clutch parasitized by a whistling-duck, and 43 (86.0%) from clutches containing only wood duck eggs. The duckling recruitment probability was 0.039 (95% credible interval = 0.028, 0.051). Nest initiation date had a negative effect on recruitment, wherein most recruits hatched from nests initiated earlier in the season. Given only ~9% of wood duck nests contained hooded merganser eggs, we conclude IBP writ large had no detrimental effect on DSR at a population level. The lower DSR of clutches parasitized by hooded mergansers is potentially linked to a high abundance of early-season parasites that produce “dump nests” and these clutches are often abandoned without being incubated. Despite ongoing parasitism by hooded mergansers and the range expansion of whistling-ducks, wood duck productivity in Louisiana appears to be minimally affected by interspecific brood parasitism.

Introduction

Avian brood parasitism is a reproductive strategy wherein individuals lay their eggs in the nests of others, enabling them to reduce the costs associated with reproduction [13]. Brood parasitism comes in two forms: conspecific brood parasitism (after, CBP) where eggs are laid in the nests of the same species [1, 2], and interspecific brood parasitism (after, IBP) where eggs are laid in the nests of a different species [3]. The costs incurred by the parasitized nest host depend on the developmental life history of the offspring. Parasitism of species with altricial young, which need to be fed, imposes higher costs on the host compared to species with precocial young, which are self-feeding [4]. Consequently, defense mechanisms to avoid or mitigate brood parasitism are more common in species with altricial young, while those with precocial young exhibit fewer defensive adaptations.

The offspring of waterfowl species (i.e., Anseriformes) are precocial, and facultative brood parasitism is commonly observed across these taxa [4, 5]. Brood parasitism has been studied extensively in waterfowl that nest in high densities [68], over water [9, 10], or in nest cavities [1113], as parasites can easily find host nests in these environments [4]. Brood parasitism commonly increases the clutch size of nests in the population, resulting in increased nest abandonment and a reduction in hatch rate [i.e., number of eggs hatching; 10, 11, 14]. Moreover, brood parasitism can alter the composition (i.e., the number of host and parasitic young) of the broods [10,15], which can directly influence duckling survival [10, 16, 17]. The implications of brood parasitism are complex, but the pervasiveness of this reproductive strategy makes it an important consideration for the management of waterfowl populations.

Wood ducks (Aix sponsa) are a cavity-nesting species and nest box programs are managed by state and federal agencies, nonprofit organizations, and the general public [18, 19]. The shared goal of these programs is to provide safe nest sites for wood ducks to bolster populations; however, these programs often inadvertently increase rates of brood parasitism when nest boxes are highly visible and established at high densities [14]. CBP is particularly prevalent in nest box populations [2022], and over 95% of nests are parasitized in some areas [18, 23]. CBP has been studied extensively in wood ducks, and recent research indicates that it has a minimal impact on population growth rate [24]; however, little attention has been given to the potential effects of interspecific brood parasitism.

Range-wide, the most common interspecific brood parasite of wood duck nests is the hooded merganser [Lophodytes cucullatus; 2527] whose range overlaps substantially with wood ducks [19]. Hooded merganser eggshells, which are nearly three times stronger than wood duck eggs [28], frequently cause wood duck eggs to break, resulting in reduced hatch rates [29]. Nevertheless, evaluations aimed at understanding the broader consequences to wood ducks subject to interspecific parasitism are lacking. Such research is needed, especially because black-bellied whistling-ducks (Dendrocygna atumnalis; after, whistling-duck) are rapidly expanding their breeding distribution into the southeastern United States [15, 30, 31] and are a potential new parasite of southern wood duck nests [32].

Currently, there is one documented observation of whistling-ducks parasitizing a wood duck nest in south Texas [32]. More recent studies have documented whistling-ducks nesting in South Carolina [31] and Louisiana [15], where the timing of nesting overlaps with wood ducks and hooded mergansers. Wood ducks and hooded mergansers both parasitize whistling-duck nests [15]; therefore, it is likely that wood duck nests are routinely parasitized by whistling-ducks. Such potential has raised concern among managers of wood ducks because whistling-ducks exhibit extraordinary rates of CBP, resulting in some of the largest clutch sizes ever documented in waterfowl. For example, observations in south Texas show CBP was present in 100% of nests in one population [33] and clutch sizes regularly exceeded 50 eggs in another study [the largest containing 101 eggs; 11]. While CBP is a common aspect of the life history of wood ducks and whistling-ducks, the impact whistling-ducks have on breeding wood duck populations in the southeastern United States is unknown.

Given the presence of hooded mergansers throughout much of the breeding distribution of wood ducks, as well as the expanding range of whistling-ducks throughout the southeastern United States, an evaluation of IBP in wood duck nests and its broader consequences to wood duck populations is needed. Such an assessment requires consideration of vital rates most important to wood duck population growth. Recently, Hepp et al. [24] found nest survival and duckling recruitment accounted for 11.4% and 57.7% of the variation in wood duck population growth rate. Here, we report on wood duck nests that were parasitized by hooded mergansers and whistling-ducks in central Louisiana to quantify the prevalence and effects of IBP in wood duck nests. We used a hierarchical approach to 1) describe the composition of clutches, including the size of parasitized clutches and the number of host eggs; 2) evaluate the influence of IBP on wood duck nest survival; and 3) determine the number of wood duck ducklings recruited from parasitized clutches, while also evaluating other factors influencing recruitment.

Study species

Wood ducks and hooded mergansers are widely distributed across North America, ranging from southern Canada to northern Mexico [19]. Black-bellied whistling-ducks breed throughout South and Central America, Mexico, and the southeastern United States [15, 19, 31]. Wood ducks in northern latitudes migrate south annually, while southeastern U.S. females are year-round residents, resulting in a breeding season of up to 6 months [19]. Females lay ~11 eggs, with an incubation period of approximately 30 days [19, 34]. Hooded mergansers also migrate south each fall, with southeastern females remaining year-round residents [19]. Their breeding season lasts approximately 75 days, during which they lay 10–13 eggs, and incubation takes ~32 days to complete [19, 35]. Whistling-ducks initiate nests from mid-March into early fall in the southeastern United States [15, 31]. Although their clutch size is hard to determine due to high rates of conspecific brood parasitism [15], previous research suggests a single female lays 9–18 eggs [11], with an incubation period of approximately 28 days [36].

Methods

Study area

We oversaw nest boxes established by Louisiana Department of Wildlife and Fisheries (LDWF) in Iberville, Pointe Coupee, Rapides, St. Landry, and St. Martin Parishes. Our study sites were located in Sherburne Wildlife Management Area (after, Sherburne), Thistlethwaite Wildlife Management Area (after, Thistlethwaite), Indian Creek Reservoir, Lake Rodemacher, and Oden Lake. Sherburne is 17,652 ha in size, and owned by LDWF, United States Fish and Wildlife Service, and United States Army Corps of Engineers. Sherburne is located along the Atchafalaya River and is primarily bottomland hardwood forest with backswamps and bayous. Sherburne has two moist soil units located on the eastern side of the property known as “North Farm” and “South Farm,” which are managed for migratory waterbirds. Thistlethwaite is 4,492 ha of bottomland hardwood forest and is leased to LDWF by a private individual. Indian Creek is a 1,052 ha reservoir surrounded by Alexander State Forest Wildlife Management Area, which is a mix of loblolly (Pinus taeda) and longleaf pine (Pinus palustris) and hardwood stands. Oden Lake is a smaller private lake ~6.5 km northeast of Indian Creek, and the perimeter of the lake is lined with residential housing. As part of the Oden Lake study site, we also monitored nest boxes located in a cypress swamp directly north of the lake and west of highway 165. Lake Rodemacher is 1,189 ha in size and ~3 km west of Boyce, Louisiana; the lake is used as a cooling resource when generating power for The Brame Energy Center that is located on the northwest side of the lake. Across all sites, we monitored ~300 nest boxes annually, and most of the nest box populations we oversaw were ~25 years old. Nest boxes were located over open water and accessed by boats, or off the side of levees and navigated to by all-terrain vehicles or on foot.

Field methods

We visited nest boxes from February 1–July 31 at approximately 7-day intervals during 2020–2023. We monitored the progression of wood duck nests throughout the laying and incubation stages to assign a vital status during each visit. We considered a nest to be alive during the laying stage when we observed an increase in clutch size from the prior visit, otherwise we considered it failed due to nest abandonment. We considered a nest to be alive during the incubation stage when we observed the incubation of the clutch progress from the prior visit, as determined by egg candling [37], otherwise, we considered it to be abandoned. In addition to nest abandonment, any predation event, severe weather, or observer damage that caused laying or incubation progression to cease resulted in a nest failure. We considered a nest successful if it survived to hatch ≥1 egg.

We assigned all eggs from each wood duck nest a numeric identity (after, ID) written with a permanent marker, and we documented the species of each egg [14, 38]. We determined an egg belonged to a wood duck if it was elliptically shaped and a creamy white color [19]; hooded merganser when spherical and white [39]; and whistling-duck if the egg was elliptically shaped, white in color, and showed a blotchy eggshell pattern when viewed through a candling device [15, 37].We recorded which eggs were present or missing at each visit to nests. Following the termination of a nest, we counted the number of eggs that failed or hatched. We counted eggs that went missing, remained unhatched, or were non-viable as failing; egg membranes were used to get a count of hatched eggs [40]. We used egg data when the clutch was found to determine nest initiation dates by back-calculating to the day when the first egg was laid, assuming a laying rate of one egg per day with no partial clutch losses [41]. We determined the clutch size of each nest as being the maximum number of eggs observed in it across all visits, considering all egg species.

We visited wood duck nests daily once they were within three days from their expected hatch date to capture broods from nest boxes. We randomly divided wood duck ducklings in each brood into two groups and fit the first group with web tags [42] and the other with passive integrated transponders tags [after, PIT tag; 43]. Web tags were placed near the tarsometatarsus end of the phalanges [44] and located on the inner webbing of the right foot. We inserted 2x12 mm PIT tags (www.cyntag.com) under the skin, between the scapula using 12-gauge injector needles [www.biomark.com; 43]. Once PIT tags were inserted under the skin, we used 3M Vetbond Tissue Adhesive to suture the injection point. We used both web tags and PIT tags as part of a separate project testing the differences in survival and recapture rates using these two common marking techniques. For the project duration reported here, we recaptured similar proportions of web and PIT tagged individuals; therefore, we assumed the two marking techniques did not influence our results. We returned all ducklings to nest boxes once they were marked. In addition to marking ducklings, we captured adult female wood ducks from nest boxes during incubation [42]. Once captured we fitted each female with a United States Geological Survey aluminum leg band. Waterfowl species exhibit female-based philopatry, which allowed us to recapture marked female ducklings and adults from nest boxes in subsequent breeding seasons [42, 45]. We checked all unbanded adults for web tags and used a handheld radio frequency identification device (www.biomark.com) to check for PIT tags.

Clutch descriptions

We used our egg data to categorize nests into clutch types based on the presence of IBP and nest initiation date. We termed wood duck nests containing ≥1 hooded merganser egg “mixed merganser clutches” and those with ≥1 whistling-duck egg “mixed whistling-duck clutches”; all other nests were “normal clutches,” which may have contained parasitic eggs from conspecifics. To facilitate the comparison of parameter estimates between mixed clutches and normal clutches, we divided the normal clutches into two distinct periods that aligned with the temporal periods in which we observed mixed merganser and mixed whistling-duck clutches. We labeled nests initiated before April 1 "early clutches," as parasitic merganser eggs were most likely to be observed in wood duck nests initiated prior to that date at our study sites. Conversely, nests initiated following that period were referred to as "late clutches," when parasitic whistling-duck eggs begin to appear in wood duck nests at our study sites. We confirmed April 1 was a satisfactory cutoff date for assigning early and late clutches by examining the variation in nest initiation dates for mixed clutches through visual plots.

Clutch type analyses

For each clutch type, we modeleded 1) clutch size, 2) the number of wood duck eggs, and 3) the number of hatched wood duck eggs. To do so, we constructed three Bayesian Poisson models considering clutch type as a fixed effect. We compared the posterior means of early clutches to mixed merganser clutches, and late clutches to mixed whistling-duck clutches. When predicting the number of hatched wood duck eggs, we considered only successful nests.

Nest survival

We estimated daily nest survival rate (after, DSR) and overall nest success (i.e., hatched ≥1 egg) within a Bayesian framework [46, 47]. To do so, we constructed daily encounter histories for each nest as described by Schmidt et al. [46]. Our encounter histories represented a chronological record of live-dead observations, starting with a 1 on the first day the nest was observed alive. For successful nests, the encounter history contained a continuous series of 1’s for each day we observed it. In the case of failed nests, the encounter history included 1’s for the days we observed the nest alive, followed by NA values for the days between the last observed alive state and the subsequent visit confirming the nest failed. The use of NA values specified our uncertainty of which day nest failures occurred [48, 49]. The encounter history of failed nests ended with a 0, representing the day field observers first detected the nest failed. We estimated DSR as a series of Bernoulli trials:

yi,t~Bernoulli(yi,t1*DSRi),
logit(DSRi)=α+β1*clutchtypei+β2*clutchsizei+β3*clutchsizei2+siteID,

where yi,t is the assigned vital status of nest i at time t and yi,t-1 is the assigned vital status of nest i at time t-1. We used a logit link function to evaluate the relationship between covariates and DSR, where α is baseline DSR on the logit scale. We calculated overall nest survival by exponentiating DSR to the forty-first power assuming the laying and incubation stages take 11 and 30 days to complete [18, 19]. Our linear predictor included clutch type and clutch size along with its quadratic form as fixed effects and site ID as a random effect. We included the quadratic term for clutch size as we predicted the effects of excessive brood parasitism could be non-linear, wherein wood ducks may abandon nests at some large clutch size threshold [14]. We tested this by comparing the clutch size of abandoned nests to successful nests. To do so, we constructed another Bayesian Poisson model considering nest fate (i.e., abandoned or successful) as a fixed effect in the model. We compared the posterior clutch size means of abandoned nests to successful nests. In this analysis we excluded any nests that failed due to predation events, severe weather, or observer damage.

Duckling recruitment

We used our duckling and adult capture-mark-recapture data to estimate a single duckling recruitment probability. We assumed half the marked ducklings from each brood were females and excluded male ducklings from our analysis. Female ducklings were recaptured by hand from nest boxes as adults, where PIT-tagged individuals were detected using handheld RFID readers. We used a Bayesian multistate model to derive estimates of apparent survival (Φ) and capture probability [φ; 50, 51]. We built individual encounter histories where individuals could be in one of the following three states: duckling, adult, and dead. To execute the model, we first constructed a state-transition matrix to describe the state of individuals at time t + 1 given their state at time t:

statet+1ducklingadultdeadstatetducklingadultdead[0Φd1-Φd0Φa1-Φa001],

where the matrix defines the true states and specifies that once duckling i advances to the adult state, it remains there until mortality occurs. We then built an observation matrix to link the true states to what we observed in the field:

observationtseenasducklingseenasadultnotseenstatetducklingadultdead[1000φa1-φa001],

where the matrix describes the observations on individual i at time t, given the latent state at time t. We detected all individuals observed in the duckling state; therefore, we fixed this parameter at 1. We were only able to estimate φ for the adult state because ducklings were not observable beyond their hatch dates. While the multistate model provides estimates of Φa and φa we do not report them here as they are not needed for our evaluation. We defined recruitment probability as the probability female duckling i marked at time t survives to its breeding age (1 year old) and returns to the study area at time t + 1 to be captured as a breeding adult, which is analogous to Φd.

We built a separate Bayesian multilevel model to evaluate the effects brood-level variables had on the recruitment probability [xi; 52]. We employed a zero-inflated binomial distribution to fit our data:

xiZeroInflatedBinomialni,pi,πi,
logit(pi)=α+β1*nestinitiationdatei+β2*broodsizei+broodID,

where we considered the quantity of female wood duck ducklings from brood i as the number of trials (ni) and the number later observed in the adult state as successes (pi); πi was the zero-inflated probability. We considered nest initiation date and brood size as fixed effects and brood ID as the random effect in our model. Small sample sizes precluded us from including brood composition (i.e., number of merganser or whistling-duck ducklings in each wood duck brood). We were unable to assign a nest initiation date to 17 nests; the mean nest initiation date replaced these missing values [53].

Prior to running our models, we scaled all variables to have a mean of 0 and a standard deviation of 1. This process places all covariates on the same scale, facilitating the comparison of beta estimates across different covariates [54]. We calculated the percentage of variation explained by our fixed effects to evaluate their contribution to our models [55]. This involved constructing an additional nest survival and multilevel recruitment model containing only the random effect terms. We used the variance estimates (σ^2) obtained from our fixed effects and random-effects-only models, to execute our calculation using the seventh equation from Grosbois et al. [55]:

σ^2(randomeffectsonlymodel)σ^2(fixedeffectsmodel)σ^2(randomeffectsonlymodel)

We fit our DSR and multistate models in JAGS 4.3.1 [56] using the R2jags 0.7–1 package [57] in Program R 4.2.2 [58]. We used Uniform (0, 1) priors for modeling DSR, Normal (0, 0.01) priors for fixed effect coefficients, and Uniform (0, 5) priors to estimate site ID variance (σ2). For our recruitment model, we used Uniform (0, 1) priors for estimates of Φ and φ. We employed the brms 2.19.0 package [52] to fit our multilevel models, leveraging its interface with Stan [59]. For all multilevel models, we used default vague prior settings offered by the brms package for estimating fixed effect coefficients and random effect variances. For all our models, we ran 4 chains of 30,000 iterations, considered 10,000 as burn-in, and saved every tenth iteration. We confirmed our models converged via inspection of trace plots and by using the Gelman-Rubin statistic, where a R^ value < 1.05 indicated convergence [60]. From our analyses, we report posterior means (μ) and coefficient values (β), where credible intervals (after, CI) that did not overlap zero indicated significance effects from model coefficients at the 0.05 alpha level. For models containing clutch type as a covariate, normal clutches were used as the reference group.

We conducted our work under U.S. Fish and Wildlife Service banding permit #06669 and Special Use Permit 43614-20-04; Louisiana Department of Wildlife and Fisheries state collecting permits WDP-20-037 and WDP-21-060, and Wildlife Management Area Permit WL-Research-2020-03; Louisiana State University Institutional Animal Care and Use Protocol A2019-27.

Results

We monitored a total of 1,295 wood duck nests from 2020−2023. We observed mixed merganser clutches initiated from January 26–April 29 and mixed whistling-duck clutches initiated from February 12–June 14. We determined April 1 was a satisfactory cutoff date for assigning early and late clutches (Fig 1). Of the nests we monitored, 112 (8.7%) were mixed merganser clutches, 614 (47.5%) were early clutches, 148 (11.5%) were mixed whistling-duck clutches, and 418 (32.4%) were late clutches. A total of 3 wood duck nests contained both parasitic merganser and whistling-duck eggs, which we excluded from our analyses. A total of 46 (41.1%) mixed merganser, 303 (49.3%) early clutches, 82 (55.4%) mixed whistling-duck, and 188 (45.0%) late clutches were successful. We observed a total of 16,454 wood duck eggs, with 1,440 (8.8%) being laid in mixed merganser clutches, 8,777 (53.3%) in early clutches, 1,585 (9.6%) in mixed whistling-duck clutches, and 4,652 (28.3%) in late clutches. A total of 418 (29.0%) wood duck eggs hatched from mixed merganser clutches, 3,578 (40.8%) from early clutches, 607 (38.3%) from mixed whistling-duck clutches, and 1,734 (37.3%) from late clutches. Additionally, mixed clutches hatched 165 hooded mergansers and 196 whistling-ducks. Of the mixed merganser clutches that failed, 20 (17.9%) nests failed due to abandonment, 45 (40.2%) were depredated, and 1 (0.01%) failure was undetermined. Among the early clutches that were unsuccessful, 77 (12.5%) nests were abandoned, 230 (37.5%) were depredated, and 4 (0.01%) failure causes were undetermined. Of the mixed whistling-duck clutches that failed, 18 (12.2%) nests failed due to abandonment and 48 (32.4%) were depredated. Among the late clutches that were unsuccessful, 55 (13.2%) nests were abandoned, 174 (41.6%) were depredated, and 1 (0.001%) failure was undetermined.

Fig 1. Density plots showing nest initiation dates for wood duck (Aix sponsa) clutches categorized into three groups: Normal clutches (i.e., clutches with only wood duck eggs), clutches containing parasitic hooded merganser eggs (Lophodytes cucullatus; Mixed HOME),, and clutches containing parasitic black-bellied whistling-duck eggs (Dendrocygna autumnalis; Mixed BBWD).

Fig 1

The vertical dashed line represents April 1, which is used as the cutoff date for early and late wood duck nests.

All our models achieved convergence according to trace plot inspections and R^ values. Considering early clutches as the reference group, mixed merganser clutches were larger (β = 0.15, CI = 0.09, 0.20), late clutches were smaller (β = -0.27, CI = -0.30, -0.23), and mixed whistling duck clutches were comparable (β = 0.02, CI = -0.03, 0.07; Fig 2). There were fewer wood duck eggs in mixed merganser clutches (β = -0.11, CI = -0.18, -0.05), late clutches (β = -0.26, CI = -0.29, -0.22), and mixed whistling duck clutches (β = -0.31, CI = -0.37, -0.26; Fig 2). Likewise, fewer wood duck eggs hatched from mixed merganser clutches (β = -0.32, CI = -0.43, -0.21), late clutches (β = -0.26, CI = -0.32, -0.20), and mixed whistling duck clutches (β = -0.47, CI = -0.56, -0.39; Fig 2).

Fig 2. Posterior means from three Bayesian Poisson models estimating clutch size (i.e., total number of eggs), number of wood duck (Aix sponsa) eggs, and number of hatched wood duck eggs, with clutch type as a 44fixed effect.

Fig 2

Early clutches contained only wood duck eggs and were initiated before April 1. Late clutches contained only wood duck eggs and were initiated after April 1. Mixed HOME clutches were wood duck nests containing ≥ 1 hooded merganser (Lophodytes cucullatus) egg and were primarily observed before April 1. Mixed BBWD clutches were wood duck nests containing ≥ 1 black-bellied whistling-duck (Dendrocygna autumnalis) egg and were primarily observed after April 1.

Baseline DSR from our model containing clutch type and clutch size along with its quadratic form as fixed effects was 0.981 (CI = 0.974, 0.987), which yielded a nest success estimate of 0.455 (CI = 0.340, 0.585). The variance estimate for the fixed effects model was 0.603 (CI = 0.552, 0.705) and 0.628 (CI = 0.568, 0.742) for the random-effects-only model; therefore, model covariates explained 3.9% of the variation in DSR across our study sites. Clutch size (β = 2.35, CI = 2.12, 2.58) and the quadratic term (β = -1.50, CI = -1.69, -1.29; Fig 3) had a positive and negative influence of DSR, respectively. The survival benefits of a large clutch appeared to asymptote at ~23 eggs (Fig 3). Mixed merganser clutches had a negative effect on DSR (β = -0.67, CI = -0.99, -0.56), yielding a DSR estimate of 0.964 (CI = 0.947, 0.977). DSR was similar for all other clutch types and ranged from 0.980−0.983. We found little evidence of larger clutches being abandoned by wood ducks, as abandoned clutches (μ = 12.0, CI = 10.6, 13.7) were smaller than successful ones (μ = 15.5, CI = 13.7, 17.5).

Fig 3. Daily survival rate of wood duck (Aix sponsa) nests across different clutch sizes.

Fig 3

Clutch size was the maximum number of eggs (i.e., host and parasitic eggs combined) observed in each nest across all visits.

We considered the capture histories of 2,465 female ducklings marked from 480 successful nests and 540 adult females captured from nest boxes. We tagged 186 (7.6%) female wood duck ducklings from 41 mixed merganser clutches, 1,389 (56.4%) from 223 early clutches, 224 (9.1%) from 64 mixed whistling-duck clutches, and 666 (27.0%) from 152 late clutches. We recaptured 50 (2.0%) ducklings as breeding adults with 6 (3.3%) returning from mixed merganser clutches, 30 (2.2%) from early clutches, 1 (0.5%) from a mixed whistling-duck clutch, and 13 (1.2%) from late clutches.

The mean recruitment probability was 0.039 (CI = 0.028, 0.051) across our entire study period. Nest initiation date had a negative effect (β = -0.73, CI = -1.13, -0.35; Fig 4) on duckling recruitment probability, while brood size had no effect (β = -0.20, CI = -0.54, 0.14). The across-brood variance estimate was 0.544 (CI = 0.025, 1.352) for the model containing fixed effects (i.e., nest initiation date and brood size) and 0.671 (CI = 0.036, 1.527) for the random-effects-only model, suggesting fixed effects explained 18.8% of the across-brood variation in recruitment probability.

Fig 4. Recruitment probability for wood duck (Aix sponsa) ducklings across nest initiation dates.

Fig 4

The box plot shows the variation in nest initiation dates for ducklings recaptured as breeding adults. All plots are scaled to the same x-axis.

Discussion

We found hooded mergansers and whistling-ducks each parasitized wood duck nests for ~3 months during the breeding season, and wood duck nests were simultaneously parasitized by both species for a period of ~1.5 months (Fig 1). Approximately 20% of the wood duck nests we observed were interspecifically parasitized. Mixed merganser clutches had a lower DSR, whereas DSR for mixed whistling-duck clutches was commensurate to early and late normal clutches. Explaining the lower DSR observed in mixed merganser clutches presents a challenge, but it is potentially linked to a high abundance of early-season hens that are strictly brood parasites that do not incubate. These brood parasites often produce "dump nests" that are never incubated (Semel et al. 1988), which appear in our data as failed (abandoned) nests.

We found IBP had minimal effects on the DSR of wood duck nests when considering clutch size and type. In contrast, IBP contributed to larger clutch sizes, with DSR increasing up to a clutch size of ~23 eggs, after which a significant quadratic effect caused DSR to decline (Fig 3). The relationship between larger clutch sizes and higher DSR may be driven by partial clutch predation by red-bellied woodpeckers (Melanerpes carolinus), which occurred when nest boxes were vacated by wood ducks during laying and incubation recesses [61]. We hypothesize that parasitic egg laying and large clutch sizes (i.e., clutch sizes ≤ 28 eggs) act as a protective mechanism against nest abandonment. Without the addition of eggs from parasitic individuals, wood duck clutches would be depleted by partial predation, particularly during the laying period, which would increase the probability of nest abandonment.

The mean recruitment probability from our study is comparable to estimates from wood duck populations in South Carolina, which ranged from 2.24–6.84% [42]. Surprisingly, ducklings hatched from mixed merganser clutches had the highest apparent return rate (3.2%); however, most of these recaptures were from a single study site, where the other factors such as brooding habitat may have been favorable. Nest initiation date was the only important predictor of recruitment probability and strongly suggests that earlier-hatched female ducklings have a greater chance of entering the nest box population as breeding adults. Hepp et al. [42] analyzed 6 years of data for wood duck ducklings web-tagged in South Carolina and found no relationship between duckling recruitment and hatch date. Similarly, studies estimating 30-day duckling survival found hatch date had little influence on survival [17, 62]. While our findings contradict these results, it is worth noting that several studies on other waterfowl species have consistently shown higher recruitment rates for ducklings hatched earlier in the spring [6365]. In our analysis, we found that nearly 75% of the recruited ducklings hatched from nests initiated prior to mid-April. Recruited ducklings were more likely to have hatched from clutches that were initiated around the peak nest initiation date, which typically occurred in early-March, as indicated by the distribution plot in Fig 1. The bimodal distribution in Fig 1 coincides with first-round nesters and renesters [66]; hence, our recruitment analysis suggests that first-round nesters likely recruit more female ducklings. Another explanation for the lower recruitment probability for ducklings hatched in the late spring and summer is the diminished brood habitat, where water levels are lower at many of our study sites either due to drier weather conditions or intentional drawdowns for management purposes (e.g., moist soil and invasive aquatic vegetation management).

Overall, our findings indicate that IBP in wood duck nests has minimal effects on DSR and duckling recruitment probability; however, it is worth exploring potential reductions in individual fecundity as a result of mixed clutches. To evaluate these costs, future research could use modern genetic techniques to measure the reduction in hatched host eggs in mixed clutches, which includes determining the number of eggs belonging to conspecific parasites [67]. Furthermore, it would be valuable to investigate other vital rates during the breeding season, such as breeding propensity and 30-day brood survival, particularly in relation to breeding densities of whistling-ducks. Personnel from Louisiana Department of Wildlife and Fisheries and Louisiana State University Agricultural Center report whistling-ducks displaying aggressive behavior, potentially discouraging wood ducks from accessing nest boxes and even attempting to drown wood duck broods. These observations present promising avenues for future research studies.

Supporting information

S1 File

(R)

pone.0305899.s001.R (29.4KB, R)
S2 File

(CSV)

pone.0305899.s002.csv (21.7KB, csv)
S3 File

(CSV)

pone.0305899.s003.csv (26.4KB, csv)
S4 File

(TXT)

pone.0305899.s004.txt (1.6KB, txt)
S5 File

(CSV)

pone.0305899.s005.csv (101.3KB, csv)
S6 File

(CSV)

pone.0305899.s006.csv (21.8KB, csv)
S7 File

(CSV)

pone.0305899.s007.csv (4.8KB, csv)

Acknowledgments

Funding for this project was provided by the Louisiana Department of Wildlife and Fisheries, United States Department of Agriculture, Nemours Wildlife Foundation, National Institute of Food and Agriculture McIntire-Stennis grant LAB94294, Louisiana State University College of Agriculture, Louisiana State University Agricultural Center, United Waterfowlers of Florida, and the Louisiana Ornithological Society. Louisiana Department of Wildlife and Fisheries and Nemours Wildlife Foundation assisted with data collection and study design. The remaining funding sources had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript. We thank the Louisiana Department of Wildlife and Fisheries for providing field housing and supplying assistance with collecting data. We especially thank C. Jones and T. Vidrine for helping with issues that arose during fieldwork. We thank all the technicians who served on this project: N. Bosco, D. Ducote, J. Dubman, A. Jackson, N. Ragucci, C. Tiemann, J. Williams, and A. Yaw. We appreciate the dedication of K. Miranda, who assisted with both fieldwork and data entry while also working on an undergraduate honors thesis at Louisiana State University. KMR and LAR acquired the bulk of funding and DLB obtained additional grants; DLB collected the data; DLB and KMR conceived and conducted the analyses, DLB drafted the paper with edits from KMR and LAR.

Data Availability

All relevant data for this study are publicly available from the Dryad repository (https://doi.org/10.5061/dryad.gtht76hvt).

Funding Statement

Funding for this project was provided by the Louisiana Department of Wildlife and Fisheries, United States Department of Agriculture, Nemours Wildlife Foundation, National Institute of Food and Agriculture McIntire-Stennis grant LAB94294, Louisiana State University College of Agriculture, Louisiana State University Agricultural Center, United Waterfowlers of Florida, and the Louisiana Ornithological Society. Louisiana Department of Wildlife and Fisheries and Nemours Wildlife Foundation assisted with data collection and study design. The remaining funding sources had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.

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Decision Letter 0

Steven E Travis

11 Apr 2024

PONE-D-24-06740Wood duck nest survival and duckling recruitment is unaffected by interspecific brood parasitism from hooded mergansers and black-bellied whistling ducksPLOS ONE

Dear Dr. Bakner,

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Additional Editor Comments:

As you will see, both reviewers were enthusiastic about the importance of this contribution to the literature on interspecific brood parasitism, particularly considering the tremendous amount of data presented and the robustness of the statistical analysis.  However, Reviewer 1 would like to see some additional effort put into improving your figures, and both reviewers agree, and I strongly concur, that your analytical methods could use some additional explanation for the benefit of the many readers who may find them unfamiliar.  On the other hand, I do not feel it is necessary for you to create a table presenting definitions of the various acronyms used throughout your paper, although you may certainly follow this suggestion if you find it useful.

Additional line-by-line suggestions from my own independent review and those of two anonymous reviewers appear below.  You should pay careful attention to each of these comments in crafting your revisions.

Academic Editor comments:

Lines 20-24:  The first sentence should do a better job of summarizing the overall theme of the paper, which is about more than just hooded mergansers parasitizing wood ducks.  Combining the first two sentences and reorganizing a bit to bring wood ducks to the top should do the trick.

Lines 33-34:  Qualify “recruits” as adults.

Lines 39-41:  Why weren’t abandoned “dump nests” excluded from analysis?

Lines 41-42:  The effects of parasitism on recruitment could only be evaluated relative to hooded mergansers, but not whistling ducks, correct?  This should be clarified.

Lines 44-45: “minimally affected” might be a better way of describing it.

Lines 59-60:  It would be worth naming these three taxa.

Line 74:  Here and throughout remember to italicize species names.

Line 113:  replace “and” with “an.”

Line 212:  replace “predicted” with “modeled.”

Line 216:  I don’t really think sharing these model formulas is necessary, but if they are then it should be clarified why a model with only categorical explanatory variables (clutch type and site) would need an intercept and slope.  Maybe citing a reference would help clear things up.  Also, while site as a random effect might well contribute to model error, many other unmeasured factors would further contribute to error, so it doesn’t seem appropriate to depict this effect in your model definition simply as error.

Line 226:  parentheses should only be placed around the year.

Line 239:  At time t?

Line 252:  Again, unless you can cite a reference that establishes this modeling approach, which includes an intercept, a slope, and an error term in place of an actual random effect, I don’t think including a formal model definition is very useful.

Line 295:  Again, why depict your random effect, brood, as the sole source of error in this model definition, when there would be many other sources of unmeasured error?  Is there a reference you could cite for this approach?

Lines 296-297:  It’s not clear to me why female ducklings (as opposed to quantity of female ducklings per brood) wouldn’t serve as the trials for this analysis.  Or is that what you’re actually trying to say?

Lines 303-304:  Using mock nest initiation values for 17 nests would seem to create the possibility of artificially reduced variance terms.  Can you cite a reference to back up this approach?  Otherwise, why not omit these nests from the analysis?  Or at least compare results generated with and without these nests?

Lines 305-306:  I.e., you converted all observations to z-scores.  Why was this necessary or useful?

Line 309:  What about error that went beyond the random effects?  Or are you calling all variation not explained by the fixed effects random effects?

Line 336:  Omit “in those.”

Lines 344-346:  These percentages would be more informative if they were the percent of eggs hatching from the total eggs representing each group rather than all groups.

Line 354:  replace the Greek letter mu with x-bar or simply “mean” here and throughout.  Also, clarify that these are total clutch sizes representing both wood duck and IBP eggs.

Line 356:  why are two means given for mixed merganser nests?

Line 366 and Fig 3 caption:  Why are these clutch sizes described as “predicted” and not simply as mean clutch sizes?

Line 372:  Clarify that this DSR estimate cuts across all clutch types combined.

Line 374:  You should remind the reader of what the fixed effects for the DSR model were.

Lines 376-379:  How was the significance of these effects evaluated?

Lines 388-394:  Again, these percentages would be more informative if calculated within rather than among nest types.

Line 396:  Add “date” after “nest initiation.”

Lines 396-398:  How is the reader to gauge whether these effects are significant?

Line 399:  Again, remind the reader what fixed effects were being evaluated in this case.

Line 405:  Omit “marked.”

[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #2: Yes

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2. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: I Don't Know

Reviewer #2: Yes

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3. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #2: Yes

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4. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #2: Yes

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5. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: Dylan Bakner: Wood Duck recruitment and heterospecific nest parasitism

This manuscript summarizes and carefully analyses a huge data set addressing the effects of brood parasitism on both hatching success and recruitment (no less!) of Wood Duck eggs at three localities in Louisiana. While brood parasitism, both by other Wood Ducks and by Hooded Mergansers, is well known, this is the first large scale study to address the effects of parasitism by Black-bellied Whistling Ducks. It is an extraordinary data set that seems thoroughly well analyzed, although I am not at all qualified to assess the details of the modern analyses used in this paper.

I have only a minor recommendation concerning the text, and that is to consider adding a table summarizing the many short definitions used throughout the text. While each was obvious enough when presented, the ensemble, throughout the manuscript, became hard for me to remember.

My serious recommendation for improving the manuscript is that the figures be extensively revised to better communicate. There is just too much information packed into them, with conflicts about axis, for them to work well. To me, the best rule about figures is that if they cannot be directly moved into a textbook, without being redone, then they are not working well.

In general, most of the data figures are composites, presenting several things in each panel, but many of the panels completely lack the axies needed to make them understandable. It seems to me that the authors need to generate a better description of the wood duck breeding phenology before they dive into the many interactions with their two parasites that need interpretation. Further, the presence of both interspecific and conspecific parasitic eggs clearly shows that a single female’s clutch is smaller than optimal, and this continues to remain puzzling, as far as I know. Surely some brief mention of that might help inspire others to consider that conundrum.

Figure 2 has no Y axis that is labeled! Readers needs real dates at several places on the X axis so they don’t have to figure out months and days. Also, the legend suggests that the distributions do not include clutches that were not parasitized. Is this really true? If so, why were those excluded? (As an aside, it is extremely difficult for a reviewer to be forced to be searching for legends in the text when the figures, (without legends!!), appear at the at the end of the manuscript.)

I just don’t understand why there are not separate frequency distributions for all categories of nests: Plotting the frequency of wood duck nests by season, presumably would show up as a bimodal distribution (early and late, as shown in Figure 5?), needing some explanation: adults and juveniles or first nesters and re-nesters, or something else? THEN, the fraction parasitized needs to be listed in this or still another figure. It is clear that there is little overlap in the timing of parasitism by mergansers and tree ducks, but the grand phenology is poorly presented! And no effort is made to interpret the extreme difference in the laying phenology of the two parasites. I guess it seems to me that there needs to be a better descriptive presentation of the nesting phenology of wood ducks and their parasites before the strikingly bimodal temporals distributions of the two parasites is presented.

Figure 3 needs a clear explanation that this is a model and not actual averages. Further, it is nowhere in the legend that essentially all the merganser parasitized clutches were early, and the opposite for all the whistler parasitized clutches. So some reference is needed to Fig 2 to make this clear, as there is substantial overlap. Early and Late seem to refer to only Wood duck nest that were not parasitized in those time periods. But then, what becomes of late parasitic eggs laid by hoodeds, and vice versa for whistling ducks. These show up clearly in Figure 2!

Figure 4. Nothing in the legend reminds people that here, clutch size means the TOTAL number of parasitic eggs, as well as the number of host and parasitic wood duck eggs.

Figure 5. It is just unacceptable to have a distribution representing the number of observed nests that has no axis label! Further, it is unclear whether the X axis that would apply to the distribution of observed nests would be the same as that for nest initiation dates. In essence there are three figures that are stacked, presumably all with the same X, but that is not specified. Further the top two are different. One just a box plot of probabilities, the other a frequency distribution that may also apply to Fig. 2.

This is a stunning data set, and is making a great contribution to our understanding of how these two parasites are essentially having little effect on wood duck production in the southeast. But all that field work must deserve a bit of extra effort in revising the figures to make them communicate more effectively!

Sievert Rohwer

Reviewer #2: Review of PONE-D-24-06740

Wood duck nest survival and duckling recruitment is unaffected by interspecific brood parasitism from hooded mergansers and black-bellied whistling ducks.

General Comments:

I am a bit slow on this review, so I'll keep this short, not only in the interest of time, but also because I don't think an extensive review is needed. Overall, this is a solid manuscript that presents some useful information on the impacts of interspecific brood parasitism (IBP) by two species of cavity nesting waterfowl, Hooded Mergansers (HOME) and Black-bellied Whistling-ducks (BBWD), on a third species of cavity nesting waterfowl, the Wood Duck (WODU). There's considerable interest in the ecology, reproduction, and management of Wood Ducks, particularly in terms of nest and hatching success. Managers often use nest boxes to supplement natural cavities, and this has been an important management tool for decades. The potential utility of these practices can be impacted, however, by other species such as HOME and BBWD, who also use these nest boxes and lay their eggs in the nests of Wood Ducks, potentially reducing nest success. Accordingly, managers are concerned about these impacts. Moreover, Black-bellied Whistling-ducks have become increasingly abundant in the southern states as the authors note, and there's a potential for further expansion in the future. A basic study like this provides useful information on the potential impacts of such an expansion.

Beyond the management aspects, there's some interesting evolutionary ecology at play as well. Interspecific brood parasitism has been a focus of much research over the past several decades, particularly on the potential for coevolutionary arms races to arise between hosts and parasites. Most of that research has focused on altricial bird species, such as cuckoos and cowbirds and their hosts. Far fewer studies have examined interspecific parasitism in precocial species such as waterfowl. For precocial birds, the cost of parasitism may be considerably different, and there's a little evidence of co-evolutionary arms races, primarily because the impacts on the host may be much lower. Nonetheless, robust data on these impacts are limited, most of which has come from studies on two species - Canvasbacks and Redhead ducks, with smaller number of studies on Wood Ducks and Hooded Mergansers. Now, with Wood Ducks being exposed to two potential parasitic species, things get a bit more complicated. This is the first study to dive into this three-way interaction. The analyses are robust, and the manuscript is well written. In fact, as I read it, I wondered if the highly sophisticated analysis using Bayesian models were necessary for simple comparison of the effects of IBP on clutch size and hatching success, but they certainly take the level of rigor up a notch. The analysis of recruitment was a useful and novel aspect, although hampered by the small number of 50 returning ducklings (a surprisingly low recruitment rate) and the limited sample of recruits from mixed clutches. Nonetheless, the analysis of recruitment rates relative to initiation date was informative.

I have very few concerns or comments about the manuscript and make only a few small comments and suggestions below. Overall, this paper provides useful information, both from a management perspective and on the impacts of interspecific brood parasitism in precocial species of birds, for which there is a paucity of data.

Specific Comments:

Line 26, 30-31. This is an impressive number of nests, females, and ducklings! A huge effort on the part of the researchers and I just want to highlight the value of data collected over so many nests and over a period of four years. This alone makes the paper stand out among other studies with fewer samples and more limited study periods.

Line 80-82. You might also cite some of Charlotte Roy Nielsen's work on CBP in Wood Ducks - she has published several relevant papers and has done some great work that should be acknowledged.

Nielsen, C. R., P. G. Parker, and R. J. Gates. 2006. Intraspecific nest parasitism of cavity-nesting wood ducks: costs and benefits to hosts and parasites. Animal Behaviour 72:917–926.

Roy Nielsen, C. L., R. J. Gates, and P. G. Parker. 2006. Intraspecific nest parasitism of wood ducks in natural cavities: comparisons with nest boxes. The Journal of Wildlife Management 70:835–843.

Roy Nielsen, C. L., P. G. Parker, and R. J. Gates. 2008. Partial clutch predation, dilution of predation risk, and the evolution of intraspecific nest parasitism. The Auk 125:679–686.

Line 149. I recognize the challenges of visiting so many nest boxes on a regular interval. A weekly check (~7d) is typical of these kinds of studies, but I do wonder whether that generates enough encounters to provide sufficient data for a full-on DSR survival analysis - effectively 2-3 nest checks (encounters) per site?

Lines 211-221. I am, admittedly, a statistical dinosaur, and I very much appreciate the rigor and contemporary approach to these analyses. Using Bayesian multilevel Poisson models to estimate the effects of clutch type (HOME, BBWD parasitism) on clutch size is undoubtedly powerful, but I do wonder whether this is absolutely necessary. Is it akin to using a sledge hammer to simply drive a nail? I realize the value and strengths of Bayesian analyses and they are the new standard, but it does seem like a very sophisticated analysis for what should be a quite simple comparison of clutch size as a function of clutch type. I don't mean this as a criticism, but as an old-timer, I do sense a growing tendency to use the newest techniques simply because they are the newest technique, rather than one that's absolutely necessary. I don’t' disagree with doing things correctly and with the best possible method - perhaps the authors might make a short statement about their overall statistical approach and why it was chosen?

Line 221. So, hatch success was only considered for successful nests, which makes sense because including failed nests would conflate both nest success and hatch success, and would have an excess of 0's, leading to a very zero-inflated distribution. The authors might want to point out that in effect, they are undertaking a hierarchical approach to: (1) first assess the effect on nest success. If the nest is successful, then (2) assess the factors influencing clutch size and hatch success, and (3) then, with the sample of recruits, assess duckling survival and the effects of initiation date (not parasitism) on duckling recruitment. This may not be necessary but it would help a reader follow the inherent hierarchical framework and make it explicit.

Line 260-262. How did you remove/exclude males? Did you simply just split the sample of ducklings in half or did you actually sex ducklings (possible to do, but difficult and time consuming).

You should also clarify whether your recruits include ducklings that were "recaptured" by RFID reads, rather than being caught on the nest. That was never made clear (i.e., the hidden recruits - we have observed these females comprising a large fraction of the recruits in our own wood duck studies).

Line 281-282. Why is the entry for the transition from "duckling" in state t to "seen as adult" in state t+1 "0"in the observation matrix? I am probably not understanding how this analysis is done; naively I would think that entry would be the observed probability of marked ducklings that were then caught as adults (Φd). If not, how the is Φd) estimated (lines 288-290)? Maybe a bit more description for readers unfamiliar with this method.

Line 301-304. I am not sure that using "nest initiation date as replacement variable to represent the temporal variation in brood composition" really accounts for the effects of parasitism. Certainly, there is temporal overlap in the timing of early Wood Duck nests and Hooded Merganser parasitism, and late Wood Duck nests and Black-bellied Whistling-duck parasitism, but this is confounded by other seasonal changes in brood habitat, etc. that may have a strong influence on both mixed and non-mixed clutches. The question is whether, given (or controlling for) those seasonal patterns, there an additional influence of parasitism? I understand that small sample sizes of recruits for mixed clutches prevent such a contrast, but I don’t think using "initiation date" is valid "replacement variable". You simply are assessing the effect of initiation date (which is useful) but can infer little about the effect of parasitism per se.

Line 391-394. The percentages reported here refer to the proportions of the 50 recaptured ducklings, but that's not relevant given that different numbers of ducklings were tagged from each type of clutch. More useful would be the number of recaptured ducklings from each clutch type relative to the number that were tagged for that clutch type. So, 6 of 186 (3.25%) ducklings returned from mixed HOME clutches, 30 of 1389 (2.16%) returned from early WODU nests, 1 of 224 (0.45%) from mixed BBWD clutches, and 13 of 666 (1.98%) from late WODU clutches. That better represents the small number of recruits and the similarity among clutch types. The proportion of the 50 is meaningless given the different numbers tagged.

Line 412-416. This is a reasonable explanation, but might the lower survival of mixed merganser clutches also be due to aggressive interference among merganser and wood duck females, or perhaps just the effects of large rounder eggs of mergansers impacting wood duck incubation or nest success? Moreover, if this pattern were simply due to earlier nests including more "dump nests that are never incubated", that should be true for non-mixed early clutches as well and so would not explain the lower DSR of mixed merganser clutches. I think a more discussion of the reduced success in mixed merganser clutches is warranted.

Line 418-420. Wasn't the second term of the quadratic relationship with clutch size negative (line 377), such that DSR declines at larger clutch sizes? That also seems to be apparent in Figure 4. It appears you were interpreting this as indicating an asymptote, but it could be (and appears to be) a declining function after 30-35 eggs (you did not show the predicted function for larger clutch sizes but it trends down). Other studies of wood ducks (e.g. Semel and Sherman) found a decline in hatch success when clutch sizes become extreme. You might want to be more cautious about suggesting that there was "no evidence that excessive clutch sizes diminished survival".

Line 424-425. Again, a bit of caution is warranted here. Given that DSR is lower in the mixed merganser clutches, I would be cautious about suggesting the parasitic egg laying and larger clutch sizes can be a protective mechanism against nest abandonment.

Line 430-432. This is an interesting idea that over 25 years there has been adaptation to excessive brood parasitism. It's not clear how this might arise and without any evidence from other studies to support such a mechanism, perhaps this is too speculative? Admittedly, I am one who loves to speculate rampantly (and am often criticized for it), but I think you need a bit more evidence or at least a plausible mechanism for there to be support for this suggestion.

Overall, I enjoyed reading this manuscript and believe it is a very useful contribution. The sample sizes are extensive, the analyses are thorough and robust (even given my comments about using more sophisticate analytical methods than might be necessary), and there is a need for more studies such as this on precocial species if we are to fully understand the ecological, evolutionary, and management implications of IBP in birds.

I hope my comments are useful.

John Eadie

UC Davis

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pone.0305899.s008.pdf (124KB, pdf)
PLoS One. 2024 Jul 2;19(7):e0305899. doi: 10.1371/journal.pone.0305899.r002

Author response to Decision Letter 0


24 May 2024

-Author’s responses to comments shown in red text.

Editor Comments

As you will see, both reviewers were enthusiastic about the importance of this contribution to the literature on interspecific brood parasitism, particularly considering the tremendous amount of data presented and the robustness of the statistical analysis. However, Reviewer 1 would like to see some additional effort put into improving your figures, and both reviewers agree, and I strongly concur, that your analytical methods could use some additional explanation for the benefit of the many readers who may find them unfamiliar. On the other hand, I do not feel it is necessary for you to create a table presenting definitions of the various acronyms used throughout your paper, although you may certainly follow this suggestion if you find it useful.

-Thanks! We hope the analytics in the revised manuscript are clearer. All the figures have been reworked according to Review 1. We also condensed the methods for concision as we agree we probably did go a bit overboard describing some rather simple glms.

ABSTRACT

Lines 20-24: The first sentence should do a better job of summarizing the overall theme of the paper, which is about more than just hooded mergansers parasitizing wood ducks. Combining the first two sentences and reorganizing a bit to bring wood ducks to the top should do the trick.

-Done.

Lines 33-34: Qualify “recruits” as adults.

-Done.

Lines 39-41: Why weren’t abandoned “dump nests” excluded from analysis?

-We included all samples in the analysis because nest survival estimates consider both successful and failed nests, regardless of the cause of failure. Abandonment is simply just a source of nest failure.

Lines 41-42: The effects of parasitism on recruitment could only be evaluated relative to hooded mergansers, but not whistling ducks, correct? This should be clarified.

-Our recruitment model was:

logit(pi) = α + β1 * nest initiation datei + β2 * brood sizei + εi,

So, we did not actually include parasite type (i.e., species that laid parasitic eggs) in this model due to low samples for recruits:

We recaptured 50 ducklings as adults (12.0%) hatched from clutches parasitized by hooded mergansers, 1 (2.0%) from a clutch parasitized by a whistling-duck, and 43 (86.0%) from clutches containing only wood duck eggs.

So, as an alternative, we included nest initiation date and brood size as model covariates as they are linked to IBP involving both hooded mergansers and black-bellied whistling-ducks. We deleted the first part of this sentence and moved that second half to the line above where the recruitment results were first presented. Hopefully this clarifies things.

Lines 44-45: “minimally affected” might be a better way of describing it.

-Done. Also, we made this same change in the title.

INTRODUCTION

Lines 59-60: It would be worth naming these three taxa.

-Done. Added “(i.e., Anseriformes).”

Line 74: Here and throughout remember to italicize species names.

-Done.

Line 113: replace “and” with “an.”

-Thanks for catching that.

METHODS

Line 212: replace “predicted” with “modeled.”

-Done.

Line 216: I don’t really think sharing these model formulas is necessary, but if they are then it should be clarified why a model with only categorical explanatory variables (clutch type and site) would need an intercept and slope. Maybe citing a reference would help clear things up. Also, while site as a random effect might well contribute to model error, many other unmeasured factors would further contribute to error, so it doesn’t seem appropriate to depict this effect in your model definition simply as error.

-Done, we removed the equation for this rather simple model. Valid claim, furthermore, we aren’t really interested in anything about the random effect from this model like others presented in this paper. The goal of this analysis was to simply derive estimates of “1) clutch size, 2) the number of wood duck eggs, and 3) the number of hatched wood duck eggs.” We will remove the random effect from this model as well as the other Poison model in this paper.

Line 226: parentheses should only be placed around the year.

-Thanks for catching that!

Line 239: At time t?

-That’s correct. This has been corrected in the manuscript.

Line 252: Again, unless you can cite a reference that establishes this modeling approach, which includes an intercept, a slope, and an error term in place of an actual random effect, I don’t think including a formal model definition is very useful.

-This was removed. See the comment above (Line 216 comment).

Line 295: Again, why depict your random effect, brood, as the sole source of error in this model definition, when there would be many other sources of unmeasured error? Is there a reference you could cite for this approach?

-While depicted as the sole source of error, clearly that is not the case (as you suggested). In the paper we cited the seventh equation of Grosbois et al. (2008) which uses the variance estimates from a full fixed effect model and a separate random effect only model to calculate the variance explained by fixed effects. Now, why did we select these as random effects? We tried to pick the random effects that would explain the most variation in DSR and recruitment, which was based on our personal experiences being out in the field.

Lines 296-297: It’s not clear to me why female ducklings (as opposed to quantity of female ducklings per brood) wouldn’t serve as the trials for this analysis. Or is that what you’re actually trying to say?

-Replaced “in” with “from” and “treated” with “considered” so this part of the manuscript reads “we considered the quantity of female wood duck ducklings from brood i as the number of trials (ni).” Hopefully that clears things up.

Lines 303-304: Using mock nest initiation values for 17 nests would seem to create the possibility of artificially reduced variance terms. Can you cite a reference to back up this approach? Otherwise, why not omit these nests from the analysis? Or at least compare results generated with and without these nests?

-Using means to consider data with missing covariate values has been used by previous researchers and we cite the methods described by Kéry and Royle (2016). Additionally, we reran the analysis to make sure this did influence our results. The model with these nests excluded yielded the following beta estimates:

-0.2092 (CI = -0.5546, 0.1222)

-0.7354 (CI = -1.1209, -0.3470),

and the variance explained was 18.7%. These results are the same as what we originally reported; therefore, we left this information unchanged in the manuscript.

Lines 305-306: I.e., you converted all observations to z-scores. Why was this necessary or useful?

-Scaling puts all the model covariates on the same scale. This prevents obtaining extreme beta estimates when you have covariates that are on extremely different scales.

Line 309: What about error that went beyond the random effects? Or are you calling all variation not explained by the fixed effects random effects?

-That is correct. Our fixed effects will explain some of the variation that we observed in different parameter estimates (i.e., explain some of the variation in nest survival and recruitment); however, there will still be more variation that is unexplained (i.e., things we failed to account for in our models). For example, in the recruitment model, our fixed effects explain ~19% of the variation in recruitment probability. That means there’s another 81% that’s explained by things not accounted for in our models.

RESULTS

Line 336: Omit “in those.”

-Done.

Lines 344-346: These percentages would be more informative if they were the percent of eggs hatching from the total eggs representing each group rather than all groups.

-Done. This section now reads: “We observed a total of 16,454 wood duck eggs, with 1,440 (8.8%) being laid in mixed merganser clutches, 8,777 (53.3%) in early clutches, 1,585 (9.6%) in mixed whistling-duck clutches, and 4,652 (28.3%) in late clutches. A total of 418 (29.0%) wood duck eggs hatched from mixed merganser clutches, 3,578 (40.8%) from early clutches, 607 (38.3%) from mixed whistling-duck clutches, and 1,734 (37.3%) from late clutches.”

Line 354: replace the Greek letter mu with x-bar or simply “mean” here and throughout. Also, clarify that these are total clutch sizes representing both wood duck and IBP eggs.

-Reworked this paragraph to include beta estimates to help it read cleaner; therefore, we removed mean estimates and replaced them with beta estimates. Then, Figure 3 does the job of showing model predictions. This paragraph now reads: “All our models achieved convergence according to trace plot inspections and "R" ^ values. Considering early clutches as the reference group, mixed merganser clutches were larger (β = 0.15, CI = 0.09, 0.20), late clutches were smaller (β = -0.27, CI = -0.30, -0.23), and mixed whistling duck clutches were comparable (β = 0.02, CI = -0.03, 0.07; Fig 3). There were fewer wood duck eggs in mixed merganser clutches (β = -0.11, CI = -0.18, -0.05), late clutches (β = -0.26, CI = -0.29, -0.22), and mixed whistling duck clutches (β = -0.31, CI = -0.37, -0.26; Fig 3). Likewise, fewer wood duck eggs hatched from mixed merganser clutches (β = -0.32, CI = -0.43, -0.21), late clutches (β = -0.26, CI = -0.32, -0.20), and mixed whistling duck clutches (β = -0.47, CI = -0.56, -0.39; Fig 3).”

Line 356: why are two means given for mixed merganser nests?

-That was a typo on our end. The correct value was 12.8 and is shown in Figure 3.

Line 366 and Fig 3 caption: Why are these clutch sizes described as “predicted” and not simply as mean clutch sizes?

-Y-axis is now labeled “Means”

Line 372: Clarify that this DSR estimate cuts across all clutch types combined.

-Now reads “Baseline DSR from our fixed effects model was 0.981 (CI = 0.974, 0.987) which yielded a nest success estimate of 0.455 (CI = 0.340, 0.585).” Also added “baseline” to the following statement in the methods: “We used a logit link function to evaluate the relationship between covariates and DSR, where α is baseline DSR on the logit scale.” This states DSR is simply α.

Line 374: You should remind the reader of what the fixed effects for the DSR model were.

-This now reads: “Baseline DSR from our model containing clutch type and clutch size along with its quadratic form as fixed effects was 0.981 (CI = 0.974, 0.987), which yielded a nest success estimate of 0.455 (CI = 0.340, 0.585).”Also, we add “For models containing clutch type as a covariate, normal clutches were used as the reference group.” To the end of the method section to hopefully make things easier to interpret.

Lines 376-379: How was the significance of these effects evaluated?

-See second to last sentence in the last paragraph of methods. “From our analyses, we report posterior means and coefficient values (β), where credible intervals (after, CI) that did not overlap zero indicated significance effects from model coefficients at the 0.05 alpha level.”

Lines 388-394: Again, these percentages would be more informative if calculated within rather than among nest types.

-Reviewer 2 had a similar comment. This now reads, “We recaptured 50 (2.0%) ducklings as breeding adults with 6 (3.3%) returning from mixed merganser clutches, 30 (2.2%) from early clutches, 1 (0.5%) from a mixed whistling-duck clutch, and 13 (1.2%) from late clutches.”

Line 396: Add “date” after “nest initiation.”

-Done.

Lines 396-398: How is the reader to gauge whether these effects are significant?

-See second to last sentence in the last paragraph of methods. “From our analyses, we report posterior means and coefficient values (β), where credible intervals (after, CI) that did not overlap zero indicated significance effects from model coefficients at the 0.05 alpha level.”

Line 399: Again, remind the reader what fixed effects were being evaluated in this case.

-Now reads: “The across-brood variance estimate was 0.544 (CI = 0.025, 1.352) for the model containing fixed effects (i.e., nest initiation date and brood size) and 0.671 (CI = 0.036, 1.527) for the random-effects-only model, suggesting fixed effects explained 18.8% of the across-brood variation in recruitment probability.”

Line 405: Omit “marked.”

-Done.

Review #1 Comments

This manuscript summarizes and carefully analyses a huge data set addressing the effects of brood parasitism on both hatching success and recruitment (no less!) of Wood Duck eggs at three localities in Louisiana. While brood parasitism, both by other Wood Ducks and by Hooded Mergansers, is well known, this is the first large scale study to address the effects of parasitism by Black-bellied Whistling Ducks. It is an extraordinary data set that seems thoroughly well analyzed, although I am not at all qualified to assess the details of the modern analyses used in this paper.

I have only a minor recommendation concerning the text, and that is to consider adding a table summarizing the many short definitions used throughout the text. While each was obvious enough when presented, the ensemble, throughout the manuscript, became hard for me to remember.

-We decided not to include a table as we reworked the manuscript substantially and hope that it is now clearer.

My serious recommendation for improving the manuscript is that the figures be extensively revised to better communicate. There is just too much information packed into them, with conflicts about axis, for them to work well. To me, the best rule about figures is that if they cannot be directly moved into a textbook, without being redone, then they are not working well.

-We greatly appreciate your comments on out figures and feel they are now much more impactful.

In general, most of the data figures are composites, presenting several things in each panel, but many of the panels completely lack the axies needed to make them understandable. It seems to me that the authors need to generate a better description of the wood duck breeding phenology before they dive into the many interactions with their two parasites that need interpretation. Further, the presence of both interspecific and conspecific parasitic eggs clearly shows that a single female’s clutch is smaller than optimal, and this continues to remain puzzling, as far as I know. Surely some brief mention of that might help inspire others to consider that conundrum.

-We added axis labels where necessary.

FIGURES

Figure 2 has no Y axis that is labeled! Readers needs real dates at several places on the X axis so they don’t have to figure out months and days. Also, the legend suggests that the distributions do not include clutches that were not parasitized. Is this really true? If so, why were those excluded? (As an aside, it is extremely difficult for a reviewer to be forced to be searching for legends in the text when the figures, (without legends!!), appear at the at the end of the manuscript.)

-We added the requested axis label, real dates rather than Julian dates, and also include distribution plots for early and late clutches. In this figure the distribution is derived using a probability density function. I agree that would be frustrating, but that is how PLOS ONE required us to submit.

This figure captions now reads: “Fig 2. Density plots showing nest initiation dates for wood duck (Aix sponsa) clutches categorized into four groups: clutches containing parasitic hooded merganser eggs (Lophodytes cucullatus; Mixed HOME), early normal clutches (i.e., clutches with only wood duck eggs), clutches containing parasitic black-bellied whistling-duck eggs (Dendrocygna autumnalis; Mixed BBWD), and late normal clutches. The vertical dashed line represents April 1, which is used as the cutoff date for early and late wood duck nests.”

I just don’t understand why there are not separate frequency distributions for all categories of nests: Plotting the frequency of wood duck nests by season, presumably would show up as a bimodal distribution (early and late, as shown in Figure 5?), needing some explanation: adults and juveniles or first nesters and re-nesters, or something else? THEN, the fr

Attachment

Submitted filename: ResponseToReviewers.docx

pone.0305899.s009.docx (37.7KB, docx)

Decision Letter 1

Steven E Travis

30 May 2024

PONE-D-24-06740R1Wood duck nest survival and duckling recruitment is minimally affected by interspecific brood parasitism from hooded mergansers and black-bellied whistling-ducksPLOS ONE

Dear Dr. Bakner,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

 Your revised manuscript is much improved and satisfactorily addresses nearly all of the reviewers' comments on your original submission.  Just a few items remain to be cleared up. Lines 235-236 and line 243:  Considering that epsilon is typically used to symbolize unexplained error, as opposed to the variance explained by random effects, I would urge you to replace it with “site ID” in this model formula, and then to remove your parenthetical reference to epsilon on line 243.  This approach would also require removing the definition of epsilon on line 236.

Lines 289 and 293:  Following the same logic, replace the epsilon with “brood ID” on line 289 and delete the parenthetical epsilon on line 293.

Line 297:  I think you were better off with the language you had in place previously, although I would suggest adding a brief explanation of why the standardization was necessary, similar to what you provided in your response to reviewers.

Fig. 1:  Please limit this figure to three panels, one for mixed HOME, one for mixed BBWD, and one for non-IBP nests.  By separating the latter into early and late phases of the nesting period, you’re placing a time-constraint on each distribution that doesn’t naturally exist.  Creating one distribution for the non-parasitized nests will presumably create the sort of bimodal distribution Dr. Rohwer is alluding to in his comments, and even if it doesn’t it won’t invalidate your approach to dividing up the nesting season into two distinct periods for the purposes of statistical analysis.

Fig. 4:  Please remove “Observed nests” from the figure and move “Recruited female ducklings” to the y-axis so that it reads “Density of recruited female ducklings.”  Also, clarify in the accompanying caption that these data consider females only.

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Academic Editor

PLOS ONE

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PLoS One. 2024 Jul 2;19(7):e0305899. doi: 10.1371/journal.pone.0305899.r004

Author response to Decision Letter 1


4 Jun 2024

-Author’s responses to comments shown in red text.

Editor Comments

ABSTRACT

INTRODUCTION

METHODS

Lines 235-236 and line 243: Considering that epsilon is typically used to symbolize unexplained error, as opposed to the variance explained by random effects, I would urge you to replace it with “site ID” in this model formula, and then to remove your parenthetical reference to epsilon on line 243. This approach would also require removing the definition of epsilon on line 236.

-Done!

Lines 289 and 293: Following the same logic, replace the epsilon with “brood ID” on line 289 and delete the parenthetical epsilon on line 293.

-Done!

Line 297: I think you were better off with the language you had in place previously, although I would suggest adding a brief explanation of why the standardization was necessary, similar to what you provided in your response to reviewers.

-Done! This now reads: “Prior to running our models, we scaled all variables to have a mean of 0 and a standard deviation of 1. This process places all covariates on the same scale, facilitating the comparison of beta estimates across different covariates [54].”

RESULTS

DISCUSSION

FIGURES

Fig. 1: Please limit this figure to three panels, one for mixed HOME, one for mixed BBWD, and one for non-IBP nests. By separating the latter into early and late phases of the nesting period, you’re placing a time-constraint on each distribution that doesn’t naturally exist. Creating one distribution for the non-parasitized nests will presumably create the sort of bimodal distribution Dr. Rohwer is alluding to in his comments, and even if it doesn’t it won’t invalidate your approach to dividing up the nesting season into two distinct periods for the purposes of statistical analysis.

-Done!

Fig. 4: Please remove “Observed nests” from the figure and move “Recruited female ducklings” to the y-axis so that it reads “Density of recruited female ducklings.” Also, clarify in the accompanying caption that these data consider females only.

-Done! Given the distribution of nest initiation dates for all the nests we observed throughout the study, which was moved to Fig 1 based on the previous comment, we deleted the top plot from this figure and left everything else the same. We are happy to modify this figure

Attachment

Submitted filename: ResponseToReviewers.docx

pone.0305899.s010.docx (17.4KB, docx)

Decision Letter 2

Steven E Travis

7 Jun 2024

Wood duck nest survival and duckling recruitment is minimally affected by interspecific brood parasitism from hooded mergansers and black-bellied whistling-ducks

PONE-D-24-06740R2

Dear Dr. Bakner,

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.

Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication.

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If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org.

Kind regards,

Steven E. Travis, PhD

Academic Editor

PLOS ONE

Additional Editor Comments (optional):

Reviewers' comments:

Acceptance letter

Steven E Travis

21 Jun 2024

PONE-D-24-06740R2

PLOS ONE

Dear Dr. Bakner,

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now being handed over to our production team.

At this stage, our production department will prepare your paper for publication. This includes ensuring the following:

* All references, tables, and figures are properly cited

* All relevant supporting information is included in the manuscript submission,

* There are no issues that prevent the paper from being properly typeset

If revisions are needed, the production department will contact you directly to resolve them. If no revisions are needed, you will receive an email when the publication date has been set. At this time, we do not offer pre-publication proofs to authors during production of the accepted work. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few weeks to review your paper and let you know the next and final steps.

Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org.

If we can help with anything else, please email us at customercare@plos.org.

Thank you for submitting your work to PLOS ONE and supporting open access.

Kind regards,

PLOS ONE Editorial Office Staff

on behalf of

Dr. Steven E. Travis

Academic Editor

PLOS ONE

Associated Data

    This section collects any data citations, data availability statements, or supplementary materials included in this article.

    Supplementary Materials

    S1 File

    (R)

    pone.0305899.s001.R (29.4KB, R)
    S2 File

    (CSV)

    pone.0305899.s002.csv (21.7KB, csv)
    S3 File

    (CSV)

    pone.0305899.s003.csv (26.4KB, csv)
    S4 File

    (TXT)

    pone.0305899.s004.txt (1.6KB, txt)
    S5 File

    (CSV)

    pone.0305899.s005.csv (101.3KB, csv)
    S6 File

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    pone.0305899.s006.csv (21.8KB, csv)
    S7 File

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    pone.0305899.s007.csv (4.8KB, csv)
    Attachment

    Submitted filename: PLOSONE review.pdf

    pone.0305899.s008.pdf (124KB, pdf)
    Attachment

    Submitted filename: ResponseToReviewers.docx

    pone.0305899.s009.docx (37.7KB, docx)
    Attachment

    Submitted filename: ResponseToReviewers.docx

    pone.0305899.s010.docx (17.4KB, docx)

    Data Availability Statement

    All relevant data for this study are publicly available from the Dryad repository (https://doi.org/10.5061/dryad.gtht76hvt).


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