Abstract
The DNA encoding the collagenase of Vibrio alginolyticus was cloned, and its complete nucleotide sequence was determined. When the cloned gene was ligated to pUC18, the Escherichia coli expression vector, bacteria carrying the gene exhibited both collagenase antigen and collagenase activity. The open reading frame from the ATG initiation codon was 2442 bp in length for the collagenase structural gene. The amino acid sequence, deduced from the nucleotide sequence, revealed that the mature collagenase consists of 739 amino acids with an Mr of 81875. The amino acid sequences of 20 polypeptide fragments were completely identical with the deduced amino acid sequences of the collagenase gene. The amino acid composition predicted from the DNA sequence was similar to the chemically determined composition of purified collagenase reported previously. The analyses of both the DNA and amino acid sequences of the collagenase gene were rigorously performed, but we could not detect any significant sequence similarity to other collagenases.
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- Burnette W. N. "Western blotting": electrophoretic transfer of proteins from sodium dodecyl sulfate--polyacrylamide gels to unmodified nitrocellulose and radiographic detection with antibody and radioiodinated protein A. Anal Biochem. 1981 Apr;112(2):195–203. doi: 10.1016/0003-2697(81)90281-5. [DOI] [PubMed] [Google Scholar]
- Fillenz M. Hypothesis for a neuronal mechanism involved in memory. Nature. 1972 Jul 7;238(5358):41–43. doi: 10.1038/238041a0. [DOI] [PubMed] [Google Scholar]
- Fini M. E., Austin S. D., Holt P. T., Ruby P. L., Gross R. H., White H. D., Brinckerhoff C. E. Homology between exon-containing portions of rabbit genomic clones for synovial cell collagenase and human foreskin and synovial cell mRNAs. Coll Relat Res. 1986 Jul;6(3):239–248. doi: 10.1016/s0174-173x(86)80009-7. [DOI] [PubMed] [Google Scholar]
- Fujishima A., Honda K. Electrochemical photolysis of water at a semiconductor electrode. Nature. 1972 Jul 7;238(5358):37–38. doi: 10.1038/238037a0. [DOI] [PubMed] [Google Scholar]
- Fukushima J., Takeuchi H., Tanaka E., Hamajima K., Sato Y., Kawamoto S., Morihara K., Keil B., Okuda K. Molecular cloning and partial DNA sequencing of the collagenase gene of Vibrio alginolyticus. Microbiol Immunol. 1990;34(12):977–984. doi: 10.1111/j.1348-0421.1990.tb01519.x. [DOI] [PubMed] [Google Scholar]
- Fukushima J., Yamamoto S., Morihara K., Atsumi Y., Takeuchi H., Kawamoto S., Okuda K. Structural gene and complete amino acid sequence of Pseudomonas aeruginosa IFO 3455 elastase. J Bacteriol. 1989 Mar;171(3):1698–1704. doi: 10.1128/jb.171.3.1698-1704.1989. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Gilles A. M., Keil B. Cleavage of beta-casein by collagenases from Achromobacter iophagus and Clostridium histolyticum. FEBS Lett. 1976 Jun 15;65(3):369–372. doi: 10.1016/0014-5793(76)80149-4. [DOI] [PubMed] [Google Scholar]
- Goldberg G. I., Wilhelm S. M., Kronberger A., Bauer E. A., Grant G. A., Eisen A. Z. Human fibroblast collagenase. Complete primary structure and homology to an oncogene transformation-induced rat protein. J Biol Chem. 1986 May 15;261(14):6600–6605. [PubMed] [Google Scholar]
- Henikoff S. Unidirectional digestion with exonuclease III creates targeted breakpoints for DNA sequencing. Gene. 1984 Jun;28(3):351–359. doi: 10.1016/0378-1119(84)90153-7. [DOI] [PubMed] [Google Scholar]
- Hill L. R. An index to deoxyribonucleic acid base compositions of bacterial species. J Gen Microbiol. 1966 Sep;44(3):419–437. doi: 10.1099/00221287-44-3-419. [DOI] [PubMed] [Google Scholar]
- Keil-Dlouha V. Chemical characterization and study of the autodigestion of pure collagenase from Achromobacter iophagus. Biochim Biophys Acta. 1976 Mar 11;429(1):239–251. doi: 10.1016/0005-2744(76)90047-4. [DOI] [PubMed] [Google Scholar]
- Keil-Dlouha V., Keil B. Subunit structure of Achromobacter collagenase. Biochim Biophys Acta. 1978 Jan 12;522(1):218–228. doi: 10.1016/0005-2744(78)90337-6. [DOI] [PubMed] [Google Scholar]
- Keil-Dlouha V., Misrahi R., Keil B. The induction of collagenase and a neutral proteinase by their high molecular weight substrates in Achromobacter iophagus. J Mol Biol. 1976 Nov 5;107(3):293–305. doi: 10.1016/s0022-2836(76)80006-x. [DOI] [PubMed] [Google Scholar]
- Keil B., Gilles A. M., Lecroisey A., Hurion N., Tong N. T. Specificity of collagenase from Achromobacter iophagus. FEBS Lett. 1975 Aug 15;56(2):292–296. doi: 10.1016/0014-5793(75)81112-4. [DOI] [PubMed] [Google Scholar]
- Kyte J., Doolittle R. F. A simple method for displaying the hydropathic character of a protein. J Mol Biol. 1982 May 5;157(1):105–132. doi: 10.1016/0022-2836(82)90515-0. [DOI] [PubMed] [Google Scholar]
- LOWRY O. H., ROSEBROUGH N. J., FARR A. L., RANDALL R. J. Protein measurement with the Folin phenol reagent. J Biol Chem. 1951 Nov;193(1):265–275. [PubMed] [Google Scholar]
- Lecroisey A., Gilles A. M., De Wolf A., Keil B. Complete amino acid sequence of the collagenase from the insect Hypoderma lineatum. J Biol Chem. 1987 Jun 5;262(16):7546–7551. [PubMed] [Google Scholar]
- Lecroisey A., Keil-Dlouha V., Woods D. R., Perrin D., Keil B. Purification, stability and inhibition of the collagenase from Achromobacter iophagus. FEBS Lett. 1975 Nov 15;59(2):167–172. doi: 10.1016/0014-5793(75)80367-x. [DOI] [PubMed] [Google Scholar]
- Lecroisey A., Keil B. Differences in the degradation of native collagen by two microbial collagenases. Biochem J. 1979 Apr 1;179(1):53–58. doi: 10.1042/bj1790053. [DOI] [PMC free article] [PubMed] [Google Scholar]
- McPhee D. A., Kemp B. E., Cumming S., Stapleton D., Gust I. D., Doherty R. R. Recognition of envelope and tat protein synthetic peptide analogs by HIV positive sera or plasma. FEBS Lett. 1988 Jun 20;233(2):393–396. doi: 10.1016/0014-5793(88)80468-x. [DOI] [PubMed] [Google Scholar]
- Muller D., Quantin B., Gesnel M. C., Millon-Collard R., Abecassis J., Breathnach R. The collagenase gene family in humans consists of at least four members. Biochem J. 1988 Jul 1;253(1):187–192. doi: 10.1042/bj2530187. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Nakahama K., Yoshimura K., Marumoto R., Kikuchi M., Lee I. S., Hase T., Matsubara H. Cloning and sequencing of Serratia protease gene. Nucleic Acids Res. 1986 Jul 25;14(14):5843–5855. doi: 10.1093/nar/14.14.5843. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Nguyen T. T., Dumas J., Keil-Dlouha V. New Achromobacter collagenase and its immunological relationship with a vertebrate collagenase. Biochim Biophys Acta. 1988 Jun 29;955(1):43–49. doi: 10.1016/0167-4838(88)90177-x. [DOI] [PubMed] [Google Scholar]
- Okuda K., Morihara K., Atsumi Y., Takeuchi H., Kawamoto S., Kawasaki H., Suzuki K., Fukushima J. Complete nucleotide sequence of the structural gene for alkaline proteinase from Pseudomonas aeruginosa IFO 3455. Infect Immun. 1990 Dec;58(12):4083–4088. doi: 10.1128/iai.58.12.4083-4088.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Sanger F., Nicklen S., Coulson A. R. DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463–5467. doi: 10.1073/pnas.74.12.5463. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Sank A., Chi M., Shima T., Reich R., Martin G. R. Increased calcium levels alter cellular and molecular events in wound healing. Surgery. 1989 Dec;106(6):1141–1148. [PubMed] [Google Scholar]
- Trocheris I., Herry P., Keil-Dlouha V., Keil B. Chemical modifications of Achromobacter collagenase and their influence on the enzymic activity. Biochim Biophys Acta. 1980 Oct;615(2):436–448. doi: 10.1016/0005-2744(80)90510-0. [DOI] [PubMed] [Google Scholar]
- WUENSCH E., HEIDRICH H. G. DARSTELLUNG VON PROLINPEPTIDEN. III. EIN NEUES SUBSTRAT ZUR BESTIMMUNG DER KOLLAGENASE. Hoppe Seylers Z Physiol Chem. 1963;332:300–304. doi: 10.1515/bchm2.1963.332.1.300. [DOI] [PubMed] [Google Scholar]
- Welton R. L., Woods D. R. Halotolerant collagenolytic activity of Achromobacter iophagus. J Gen Microbiol. 1973 Mar;75(1):191–196. doi: 10.1099/00221287-75-1-191. [DOI] [PubMed] [Google Scholar]
- Whitham S. E., Murphy G., Angel P., Rahmsdorf H. J., Smith B. J., Lyons A., Harris T. J., Reynolds J. J., Herrlich P., Docherty A. J. Comparison of human stromelysin and collagenase by cloning and sequence analysis. Biochem J. 1986 Dec 15;240(3):913–916. doi: 10.1042/bj2400913. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Yang M. Y., Ferrari E., Henner D. J. Cloning of the neutral protease gene of Bacillus subtilis and the use of the cloned gene to create an in vitro-derived deletion mutation. J Bacteriol. 1984 Oct;160(1):15–21. doi: 10.1128/jb.160.1.15-21.1984. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Yanisch-Perron C., Vieira J., Messing J. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. Gene. 1985;33(1):103–119. doi: 10.1016/0378-1119(85)90120-9. [DOI] [PubMed] [Google Scholar]