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. 1992 Dec 15;288(Pt 3):1069–1070. doi: 10.1042/bj2881069

New conserved amino acid region of alpha-amylases in the third loop of their (beta/alpha)8-barrel domains.

S Janecek
PMCID: PMC1131995  PMID: 1471979

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Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Bahl H., Burchhardt G., Spreinat A., Haeckel K., Wienecke A., Schmidt B., Antranikian G. alpha-Amylase of Clostridium thermosulfurogenes EM1: nucleotide sequence of the gene, processing of the enzyme, and comparison of other alpha-amylases. Appl Environ Microbiol. 1991 May;57(5):1554–1559. doi: 10.1128/aem.57.5.1554-1559.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. Boel E., Brady L., Brzozowski A. M., Derewenda Z., Dodson G. G., Jensen V. J., Petersen S. B., Swift H., Thim L., Woldike H. F. Calcium binding in alpha-amylases: an X-ray diffraction study at 2.1-A resolution of two enzymes from Aspergillus. Biochemistry. 1990 Jul 3;29(26):6244–6249. doi: 10.1021/bi00478a019. [DOI] [PubMed] [Google Scholar]
  3. Boer P. H., Hickey D. A. The alpha-amylase gene in Drosophila melanogaster: nucleotide sequence, gene structure and expression motifs. Nucleic Acids Res. 1986 Nov 11;14(21):8399–8411. doi: 10.1093/nar/14.21.8399. [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. Brady R. L., Brzozowski A. M., Derewenda Z. S., Dodson E. J., Dodson G. G. Solution of the structure of Aspergillus niger acid alpha-amylase by combined molecular replacement and multiple isomorphous replacement methods. Acta Crystallogr B. 1991 Aug 1;47(Pt 4):527–535. doi: 10.1107/s0108768191001908. [DOI] [PubMed] [Google Scholar]
  5. Buisson G., Duée E., Haser R., Payan F. Three dimensional structure of porcine pancreatic alpha-amylase at 2.9 A resolution. Role of calcium in structure and activity. EMBO J. 1987 Dec 20;6(13):3909–3916. doi: 10.1002/j.1460-2075.1987.tb02731.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  6. Farber G. K., Petsko G. A. The evolution of alpha/beta barrel enzymes. Trends Biochem Sci. 1990 Jun;15(6):228–234. doi: 10.1016/0968-0004(90)90035-a. [DOI] [PubMed] [Google Scholar]
  7. Friedberg F. On the primary structure of amylases. FEBS Lett. 1983 Feb 21;152(2):139–140. doi: 10.1016/0014-5793(83)80365-2. [DOI] [PubMed] [Google Scholar]
  8. Higgins D. G., Bleasby A. J., Fuchs R. CLUSTAL V: improved software for multiple sequence alignment. Comput Appl Biosci. 1992 Apr;8(2):189–191. doi: 10.1093/bioinformatics/8.2.189. [DOI] [PubMed] [Google Scholar]
  9. Itoh T., Yamashita I., Fukui S. Nucleotide sequence of the alpha-amylase gene (ALP1) in the yeast Saccharomycopsis fibuligera. FEBS Lett. 1987 Jul 27;219(2):339–342. doi: 10.1016/0014-5793(87)80248-x. [DOI] [PubMed] [Google Scholar]
  10. Lee S. Y., Kim S., Sweet R. M., Suh S. W. Crystallization and a preliminary X-ray crystallographic study of alpha-amylase from Bacillus licheniformis. Arch Biochem Biophys. 1991 Dec;291(2):255–257. doi: 10.1016/0003-9861(91)90131-2. [DOI] [PubMed] [Google Scholar]
  11. Long C. M., Virolle M. J., Chang S. Y., Chang S., Bibb M. J. alpha-Amylase gene of Streptomyces limosus: nucleotide sequence, expression motifs, and amino acid sequence homology to mammalian and invertebrate alpha-amylases. J Bacteriol. 1987 Dec;169(12):5745–5754. doi: 10.1128/jb.169.12.5745-5754.1987. [DOI] [PMC free article] [PubMed] [Google Scholar]
  12. MacGregor E. A. Alpha-amylase structure and activity. J Protein Chem. 1988 Aug;7(4):399–415. doi: 10.1007/BF01024888. [DOI] [PubMed] [Google Scholar]
  13. Matsuura Y., Kusunoki M., Harada W., Kakudo M. Structure and possible catalytic residues of Taka-amylase A. J Biochem. 1984 Mar;95(3):697–702. doi: 10.1093/oxfordjournals.jbchem.a134659. [DOI] [PubMed] [Google Scholar]
  14. Nakajima R., Imanaka T., Aiba S. Nucleotide sequence of the Bacillus stearothermophilus alpha-amylase gene. J Bacteriol. 1985 Jul;163(1):401–406. doi: 10.1128/jb.163.1.401-406.1985. [DOI] [PMC free article] [PubMed] [Google Scholar]
  15. Pasero L., Mazzéi-Pierron Y., Abadie B., Chicheportiche Y., Marchis-Mouren G. Complete amino acid sequence and location of the five disulfide bridges in porcine pancreatic alpha-amylase. Biochim Biophys Acta. 1986 Jan 30;869(2):147–157. doi: 10.1016/0167-4838(86)90289-x. [DOI] [PubMed] [Google Scholar]
  16. Raimbaud E., Buleon A., Perez S., Henrissat B. Hydrophobic cluster analysis of the primary sequences of alpha-amylases. Int J Biol Macromol. 1989 Aug;11(4):217–225. doi: 10.1016/0141-8130(89)90072-x. [DOI] [PubMed] [Google Scholar]
  17. Ramasubbu N., Bhandary K. K., Scannapieco F. A., Levine M. J. Crystallization and preliminary X-ray diffraction studies of human salivary alpha-amylase. Proteins. 1991;11(3):230–232. doi: 10.1002/prot.340110308. [DOI] [PubMed] [Google Scholar]
  18. Rogers J. C., Milliman C. Isolation and sequence analysis of a barley alpha-amylase cDNA clone. J Biol Chem. 1983 Jul 10;258(13):8169–8174. [PubMed] [Google Scholar]
  19. Suzuki A., Yamane T., Ito Y., Nishio T., Fujiwara H., Ashida T. Crystallization and preliminary crystallographic study of bacterial alpha-amylases. J Biochem. 1990 Sep;108(3):379–381. doi: 10.1093/oxfordjournals.jbchem.a123209. [DOI] [PubMed] [Google Scholar]
  20. Vihinen M., Mäntsälä P. Microbial amylolytic enzymes. Crit Rev Biochem Mol Biol. 1989;24(4):329–418. doi: 10.3109/10409238909082556. [DOI] [PubMed] [Google Scholar]
  21. Yang M., Galizzi A., Henner D. Nucleotide sequence of the amylase gene from Bacillus subtilis. Nucleic Acids Res. 1983 Jan 25;11(2):237–249. doi: 10.1093/nar/11.2.237. [DOI] [PMC free article] [PubMed] [Google Scholar]
  22. Yuuki T., Nomura T., Tezuka H., Tsuboi A., Yamagata H., Tsukagoshi N., Udaka S. Complete nucleotide sequence of a gene coding for heat- and pH-stable alpha-amylase of Bacillus licheniformis: comparison of the amino acid sequences of three bacterial liquefying alpha-amylases deduced from the DNA sequences. J Biochem. 1985 Nov;98(5):1147–1156. doi: 10.1093/oxfordjournals.jbchem.a135381. [DOI] [PubMed] [Google Scholar]

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