Table 3.
Comparative summary statistics output by AGAT for genes predicted by GeMoMa in assembly types for each species
| Mean gene length | Mean exon length | Mean intron length | Mean CDS length | Mean no. exons per CDS | |
|---|---|---|---|---|---|
| Brugia malay | |||||
| MinION data assembly | 4,299 | 148 | 346 | 1,394 | 9.4 |
| MinION assembly polished with Illumina data | 4,291 | 148 | 346 | 1,394 | 9.4 |
| Hybrid assembly | 4,267 | 148 | 344 | 1,389 | 9.4 |
| Trichuris trichiura | |||||
| MinION data assembly | 2,916 | 212 | 325 | 1,280 | 6.0 |
| MinION assembly polished with Illumina data | 2,909 | 212 | 325 | 1,279 | 6.0 |
| Hybrid assembly | 2,918 | 212 | 324 | 1,283 | 6.0 |
| Ancylostoma caninum | |||||
| MinION data assembly | 2,663 | 125 | 332 | 822 | 6.5 |
| MinION assembly polished with Illumina data | 2,655 | 125 | 330 | 821 | 6.5 |
| Hybrid assembly | 2,681 | 125 | 332 | 825 | 6.6 |
Mean lengths are presented as number of base pairs. Abbreviations: CDS = coding sequence.