Various assays, such as the commonly used checkerboard assay, quantify antibiotic interactions by calculating the fractional inhibitory concentration index (FICi).
where MICA and MICB are the minimum inhibitory concentrations of antibiotics A and B, and CA and CB are the concentrations inhibiting bacterial growth in combination.
According to Loewe’s additivity model, in an additive interaction the FICi equation simplifies to 1. Deviations from FICi = 1 indicate interactions: FICi > 1 shows negative interaction, while FICi < 1 indicates a positive one. Practical limits define synergy as FICi ≤ 0.5 and antagonism as FICi ≥ 4.
The FICi value, however, has limitations. It is uncommon that antibiotics interact in a balanced reciprocal way as Loewe’s model predicts, and there are many examples of established antibiotic interactions where the mechanism behind them is directional.1 The combination of streptomycin with penicillin is synergistic in Escherichia coli due to penicillin damaging the cell membrane and causing increased uptake of streptomycin.2 However, streptomycin has no effect on the action of penicillin. Similarly, the combination of streptomycin and cefotaxime is synergistic in Enterobacter cloacae due to streptomycin inhibiting a β-lactamase that impedes the effect of cefotaxime.3 For antagonisms, the combination of colistin with vancomycin is prominent, with colistin suppressing the effects of vancomycin while having no effect from it.4 All these interactions can be quantified with a FICi score, but lack information on which compound is the effector and which is the affected, respectively. Taking these considerations into account and the fact that the FIC index is an addition of two concentration ratios, for antibiotic A and for antibiotic B it is clear that some information is lost when adding the two ratios.
However, information on the directionality and nature of the interaction can be recovered if we consider the individual FICs as separate metrics:
The FICi index becomes
is then a ratio between the inhibitory concentration of drug B alone (MICB) and the inhibitory concentration of drug B in combination with A (CB). The ratio of these two can be interpreted as a metric of how the addition of drug A has affected the killing of B, showing whether A promotes or inhibits the action of B.
Each of the two fractional inhibitory concentrations (FIC) contributes equally to the sum that is the FIC index. Thus, a FICi = 1 could potentially be the result of many different pairs of . For instance, a scenario where adds up to the same FICi = 1 as a scenario where , even though the nature of the interaction is clearly different.
Instead of adding the two FIC for a single FICi value the same information can be represented in a two-axis plot where is on the x-axis and on the y-axis. Our traditional limits of synergy and antagonism can be adapted to that representation assuming a completely bilateral interaction where . Then a synergistic FICi < 0.5 translates to and an antagonistic FICi > 4 translates to . This yields the following limits of the unilateral interactions:
Applying this analysis to an already published dataset of ampicillin and gentamicin interactions in E. coli isolates5 shows a more complete picture then the original analysis (Figure 1). While the original FICi metric (Figure 1b) suggested additive interactions, individual FIC values reveal a range of effects (Figure 1c), Specifically, gentamicin consistently inhibits the efficacy of ampicillin to varying degrees (, in Figure 1c), and ampicillin has a variable impact on the efficacy of gentamicin (, in Figure 1c), which was previously masked by the FICi metric. We suggest that this easy analysis will improve our understanding of how antibiotics interact.
Figure 1.

Gentamycin (GEN) and ampicillin (AMP) checkerboard assays and new data based on the FIC index. (a) A schematic representation of a checkerboard assay indicating the concentrations present of both antibiotics in the wells of the microtitre plate. (b) Data previously published on the FICi index of the interaction between AMP and GEN in a collection of 254 clinical E. coli isolates.5 (c) the same experiments as (b) but reanalysed and illustrated as separate FIC values. The dotted lines indicate the limits of synergy and antagonism in the FIC representation (blue for synergy red for antagonism). The continuous lines represent the FICi limits of synergy and antagonism similarly (FICi = 0.5 for synergy and FICi = 4 for antagonism). To allow for intuitive reading of the FIC figure, values are represented on log2 axes starting at 0.5. This way, values to the left of the axes origin represent positive effects (synergistic) and to the right negative effects (antagonistic). Grey lines are standard deviations based on at least n = 3 for every data point.
Contributor Information
Nikos Fatsis-Kavalopoulos, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Dione L Sánchez-Hevia, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Dan I Andersson, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Funding
Funding was provided by the Swedish Research Council (Vetenskapsrådet) and the Knut and Alice Wallenberg Foundation by research grants to D.I.A. Funders had no input on data analysis, design or decision to publish.
Transparency declarations
None to declare.
References
- 1. Sullivan GJ, Delgado NN, Maharjan Ret al. How antibiotics work together: molecular mechanisms behind combination therapy. Curr Opin Microbiol 2020; 57: 31–40. 10.1016/j.mib.2020.05.012 [DOI] [PubMed] [Google Scholar]
- 2. Plotz PH, Davis BD. Synergism between streptomycin and penicillin: a proposed mechanism. Science 1962; 135: 1067–8. 10.1126/science.135.3508.1067 [DOI] [PubMed] [Google Scholar]
- 3. Maryam L, Khan AU. A mechanism of synergistic effect of streptomycin and cefotaxime on CTX-M-15 type β-lactamase producing strain of E. cloacae: a first report. Front Microbiol 2016; 7: 2007. 10.3389/fmicb.2016.02007 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 4. Choi S, Moon SM, Park S-Jet al. Antagonistic effect of colistin on vancomycin activity against methicillin-resistant Staphylococcus aureus in in vitro and in vivo studies. Antimicrob Agents Chemother 2020; 64: e01925-19. 10.1128/AAC.01925-19 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 5. Fatsis-Kavalopoulos N, Roelofs L, Andersson DI. Potential risks of treating bacterial infections with a combination of β-lactam and aminoglycoside antibiotics: a systematic quantification of antibiotic interactions in E. coli blood stream infection isolates. eBioMedicine 2022; 78: 103979. 10.1016/j.ebiom.2022.103979 [DOI] [PMC free article] [PubMed] [Google Scholar]
