Skip to main content
Biochemical Journal logoLink to Biochemical Journal
. 1993 Dec 1;296(Pt 2):389–393. doi: 10.1042/bj2960389

Structure-activity relationships in the inhibition of serine beta-lactamases by phosphonic acid derivatives.

J Rahil 1, R F Pratt 1
PMCID: PMC1137708  PMID: 8257429

Abstract

A new series of phosphonyl derivatives has been prepared and tested for inhibition of serine (classes A and C) beta-lactamases. The results were compared with those previously acquired with aryl phosphonate monoesters and with alkaline hydrolysis rates. A methyl p-nitrophenyl phosphate monoanion was markedly poorer as an inhibitor of the class C beta-lactamase of Enterobacter cloacae P99 than a comparable p-nitrophenyl phosphonate. Phosphonyl fluorides, thiophenyl esters, N-phenylphosphonamidates and a p-nitrophenyl thionophosphonate were, in general, comparable with p-nitrophenyl phosphonates in inhibitory power. The incorporation of a specific amino side chain led to an increase in the rates of inhibition of around 10(4)-fold. Apparently unresponsive to the addition of the side chain to the enzyme was N-phenyl methylphosphonamidate, where binding of the side chain may interfere with access of the leaving group to a proton which is necessary to active-site phosphonylation and inhibition. Typical class A beta-lactamases were significantly more refractory than the class C enzyme to all of these reagents.

Full text

PDF
389

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Ashani Y., Snyder S. L., Wilson I. B. Linear free energy relationships in the hydrolysis of some inhibitors of acetylcholinesterase. J Med Chem. 1973 May;16(5):446–450. doi: 10.1021/jm00263a004. [DOI] [PubMed] [Google Scholar]
  2. Cleland W. W. Secondary 18O isotope effects as a tool for studying reactions of phosphate mono-, di-, and triesters. FASEB J. 1990 Aug;4(11):2899–2905. doi: 10.1096/fasebj.4.11.2199287. [DOI] [PubMed] [Google Scholar]
  3. Govardhan C. P., Pratt R. F. Kinetics and mechanism of the serine beta-lactamase catalyzed hydrolysis of depsipeptides. Biochemistry. 1987 Jun 16;26(12):3385–3395. doi: 10.1021/bi00386a021. [DOI] [PubMed] [Google Scholar]
  4. Knap A. K., Pratt R. F. Inactivation of the RTEM-1 cysteine beta-lactamase by iodoacetate. The nature of active-site functional groups and comparisons with the native enzyme. Biochem J. 1991 Jan 1;273(Pt 1):85–91. doi: 10.1042/bj2730085. [DOI] [PMC free article] [PubMed] [Google Scholar]
  5. Lamotte-Brasseur J., Dive G., Dideberg O., Charlier P., Frère J. M., Ghuysen J. M. Mechanism of acyl transfer by the class A serine beta-lactamase of Streptomyces albus G. Biochem J. 1991 Oct 1;279(Pt 1):213–221. doi: 10.1042/bj2790213. [DOI] [PMC free article] [PubMed] [Google Scholar]
  6. Murphy B. P., Pratt R. F. Evidence for an oxyanion hole in serine beta-lactamases and DD-peptidases. Biochem J. 1988 Dec 1;256(2):669–672. doi: 10.1042/bj2560669. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Murphy B. P., Pratt R. F. N-(phenylacetyl)glycyl-D-aziridine-2-carboxylate, an acyclic amide substrate of beta-lactamases: importance of the shape of the substrate in beta-lactamase evolution. Biochemistry. 1991 Apr 16;30(15):3640–3649. doi: 10.1021/bi00229a008. [DOI] [PubMed] [Google Scholar]
  8. Oefner C., D'Arcy A., Daly J. J., Gubernator K., Charnas R. L., Heinze I., Hubschwerlen C., Winkler F. K. Refined crystal structure of beta-lactamase from Citrobacter freundii indicates a mechanism for beta-lactam hydrolysis. Nature. 1990 Jan 18;343(6255):284–288. doi: 10.1038/343284a0. [DOI] [PubMed] [Google Scholar]
  9. Ooms A. J., Breebaart-Hansen J. C., Ceulen B. I. The reaction of organophosphorus compounds with hydrolytic enzymes. II. The inhibition of citrus acetylesterase. Biochem Pharmacol. 1966 Jan;15(1):17–30. doi: 10.1016/0006-2952(66)90106-7. [DOI] [PubMed] [Google Scholar]
  10. Pratt R. F. Inhibition of a class C beta-lactamase by a specific phosphonate monoester. Science. 1989 Nov 17;246(4932):917–919. doi: 10.1126/science.2814513. [DOI] [PubMed] [Google Scholar]
  11. Rahil J., Pratt R. F. Mechanism of inhibition of the class C beta-lactamase of Enterobacter cloacae P99 by phosphonate monoesters. Biochemistry. 1992 Jun 30;31(25):5869–5878. doi: 10.1021/bi00140a024. [DOI] [PubMed] [Google Scholar]
  12. Rahil J., Pratt R. F. Phosphonate monoester inhibitors of class A beta-lactamases. Biochem J. 1991 May 1;275(Pt 3):793–795. doi: 10.1042/bj2750793. [DOI] [PMC free article] [PubMed] [Google Scholar]
  13. Strynadka N. C., Adachi H., Jensen S. E., Johns K., Sielecki A., Betzel C., Sutoh K., James M. N. Molecular structure of the acyl-enzyme intermediate in beta-lactam hydrolysis at 1.7 A resolution. Nature. 1992 Oct 22;359(6397):700–705. doi: 10.1038/359700a0. [DOI] [PubMed] [Google Scholar]

Articles from Biochemical Journal are provided here courtesy of The Biochemical Society

RESOURCES