In the salt calcium (2R,3R)-tartrate tetrahydrate, the absolute configuration was established unambiguously using anomalous dispersion effects in the diffraction patterns. High-quality data also allowed the location and free refinement of all the H atoms.
Keywords: crystal structure, wine crystal, calcium tartrate, hydrogen bonding, chirality, hydration
Abstract
The crystal structure of the salt calcium (2R,3R)-tartrate tetrahydrate {systematic name: poly[[diaqua[μ4-(2R,3R)-2,3-dihydroxybutanedioato]calcium(II)] dihydrate]}, {[Ca(C4H8O8)(H2O)2]·2H2O}n, is reported. The absolute configuration of the crystal was established unambiguously using anomalous dispersion effects in the diffraction patterns. High-quality data also allowed the location and free refinement of all the H atoms, and therefore to a careful analysis of the hydrogen-bond interactions.
Introduction
The opening of a bottle of wine is a process that can elicit a variety of expectations, either in terms of the wine’s taste, colour, smell, sensations or even in the occasional discovery of brilliant crystals, typically found on the surface of the cork in contact with the wine. The so-called Weinsteine or wine diamonds (Derewenda, 2008 ▸) are regarded by winemakers as a sign of quality, as their presence indicates that wine has been handled with natural methods and proper timing. It is known that such diamonds are actually crystalline tartrate salts.
Tartaric acid (Astbury, 1923 ▸), also known as 2,3-dihydroxybutanedioic acid, is a naturally occurring substance that is typically found on grapes and other plants. Although two enantiomers (2R,3R/2S,3S) and a meso form (2S,3R/2R,3S) are possible, only the 2R,3R enantiomer, namely l-(+)-tartaric acid, is biologically produced by vining plants. Deprotonation to its tartrate form (Fig. 1 ▸) during the fermentation and aging steps of wine production in the presence of alkali earth metal cations, usually K+ and Ca2+, may result in the slow crystallization of 2R,3R salts. This process can extend over a prolonged period, frequently becoming noticeable after commercial release.
Figure 1.
The enantiomeric and meso forms of tartrate.
Pioneering studies on the unit-cell parameters of the title compound, Ca[(2R,3R)-C4H4O6]·4H2O (1), were reported by Evans (1935 ▸), yielding a P212121 space group crystal structure, with unit-cell parameters a = 9.20 (2), b = 10.54 (2) and c = 9.62 (2) Å. Several studies since then have confirmed the crystal structure of this salt, corroborating the space group and unit-cell dimensions (Ambady, 1968 ▸; Hawthorne et al., 1982 ▸; Boese & Heinemann, 1993 ▸; Kaduk, 2007 ▸). In all the studies, aqueous solutions of tartaric acid were employed, from which crystals were grown. Although tartaric acid and its derivatives, especially its sodium ammonium salt, have long been central to the analysis of stereochemistry and chirality (Gal, 2008 ▸), since the pioneering works of Pasteur and Biott (see Flack, 2009 ▸, and references therein), it is important to note that in none of these structural reports about Ca(C4H4O6)·4H2O was it possible to identify which of the enantiomers was being measured through anomalous dispersion effects.
Interestingly, triclinic polymorphs of racemic 1 (i.e. with both enantiomers in the unit cell) have also been reported (Le Bail et al., 2009 ▸; Appelhans et al., 2009 ▸; Fukami et al., 2016 ▸). Furthermore, not only polymorphs, but also hydrates and solvates of Ca and tartrate have been reported. In this context, calcium tartrate has been found to also crystallize as its anhydrous (Appelhans et al., 2009 ▸; Aljafree et al., 2024 ▸), trihydrate (de Vries & Kroon, 1984 ▸) and hexahydrate forms (Ventruti et al., 2015 ▸), and has been observed to cocrystallize with other species (Wartchow, 1996 ▸). The absolute configuration of these hydrates and solvates has been established experimentally, except in the case of the trihydrate form, which was found to contain the meso-tartaric form. Obviously, different hydration is related to dissimilar connectivity and crystal packing.
Here, we report the crystal structure of the calcium (2R,3R)-tartrate tetrahydrate salt (1), obtained from a crystal which was found and picked up from the cork of a Crianza red wine bottle from D.O. Campo de Borja (2016). This tetrahydrated salt crystallizes in the orthorhombic space group P212121, with the unit-cell dimensions [a = 9.1587 (4), b = 9.5551 (4) and c = 10.5041 (5) Å], which are close to those reported by Evans (1935 ▸). High-quality experimental diffraction data allowed us to establish unambiguously the absolute structure and therefore the absolute configuration of the salt, and to analyze intermolecular interactions in the crystal packing.
Experimental
Single-crystal selection
Single crystals were found in the cork of a wine bottle, removed and selected under a microscope.
Single-crystal X-ray diffraction
Crystal data, data collection and structure refinement details are summarized in Table 1 ▸. H atoms were located in difference Fourier maps and freely refined. High-quality and complete diffraction data, with 99.2% of the reflections measured until a maximal resolution of (sin θ/λ)max = 0.667 Å−1 (with almost all the Friedel pairs: number of Friedel pairs measured out to the maximal resolution divided by the number of theoretically possible is 0.981, very close to unity), a mean redundancy higher than 20 and a good agreement factor (Rint = 0.030) of this Ca-containing crystal allowed us to establish the absolute structure in the solid state and therefore the absolute configuration of the molecule. For that purpose, the Flack parameter (Flack & Bernardinelli, 1999 ▸, 2000 ▸) has been refined. The obtained values are 0.028 (19) by classical fit to all intensities and 0.023 (3) using 937 quotients (Parsons et al., 2013 ▸). The obtained values of the parameter and its standard uncertainty (s.u.) value provide evidence for a strong inversion-distinguishing power and a correct estimation of the absolute structure for this structural model.
Table 1. Experimental details.
Crystal data | |
Chemical formula | [Ca(C4H4O6)(H2O)2]·2H2O |
M r | 260.22 |
Crystal system, space group | Orthorhombic, P212121 |
Temperature (K) | 100 |
a, b, c (Å) | 9.1587 (4), 9.5551 (4), 10.5041 (5) |
V (Å3) | 919.24 (7) |
Z | 4 |
Radiation type | Mo Kα |
μ (mm−1) | 0.73 |
Crystal size (mm) | 0.15 × 0.13 × 0.09 |
Data collection | |
Diffractometer | Bruker D8 VENTURE |
Absorption correction | Multi-scan (SADABS; Bruker, 2016 ▸) |
Tmin, Tmax | 0.889, 0.937 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 47365, 2275, 2268 |
R int | 0.030 |
(sin θ/λ)max (Å−1) | 0.667 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.014, 0.035, 1.09 |
No. of reflections | 2275 |
No. of parameters | 184 |
H-atom treatment | All H-atom parameters refined |
Δρmax, Δρmin (e Å−3) | 0.28, −0.25 |
Absolute structure | Flack x determined using 937 quotients [(I+) − (I−)]/[(I+) + (I−)] (Parsons et al., 2013 ▸) |
Absolute structure parameter | 0.023 (3) |
Results and discussion
The asymmetric unit of Ca[(2R,3R)-C4H4O6]·4H2O (1) is formed by a Ca2+ ion, a tartrate ligand and four water molecules. In the crystal structure, the tartrate ion exhibits typical bonding connections (Ambady, 1968 ▸). Salient bond distances and angles are listed in Tables S1 and S2 of the supporting information. The two C—O bonds of each carboxylate group, which, along with the hydroxy substituents, chelate two Ca2+ cations, are significantly longer than the other two carboxylate C—O bonds, where the O atoms bind to additional adjacent Ca atoms [C1—O11 = 1.2659 (14) Å and C4—O41 = 1.2681 (14) Å versus C1—O12 = 1.2483 (15) Å and C4—O42 = 1.2472 (14) Å]. All the C atoms of the tartrate skeleton exhibit similar C—C separations, and are positioned in an almost coplanar manner, with maximal deviations from the best plane of 0.0020 (6) Å. It is noteworthy that the folding of this dicarboxylate entity is asymmetrical. Specifically, the O21 atom of the alcohol group lies nearly in the plane defined by the C1 atom and the atoms coordinated to its sp2 hybridization, namely, C1, C2, O11 and O12 [0.069 (2) Å], whereas the alcohol O31 atom is placed significantly out of the analogous plane [atoms C3, C4, O41 and O42, 0.575 (2) Å].
Ca environment
In the crystal packing, each tartrate anion acts as a tetratopic ligand, serving as a chelate for two Ca2+ cations and as a terminal ligand for two additional Ca2+ cations (Fig. 2 ▸), whereas the Ca2+ cations (Ca1) are coordinated to four symmetry-related tartrate anions and two water molecules in a distorted pseudo-octahedral coordination environment (Fig. 3 ▸).
Figure 2.
Ca2+ cations bonded to a tartrate anion in 1. [Symmetry codes: (i) −x, y + , −z +
; (ii) −x +
, −y + 1, z +
; (iii) −x + 1, y +
, −z +
.]
Figure 3.
Coordination sphere of the Ca2+ cation in 1. [Symmetry codes: (iv) −x, y − , −z +
; (v) −x + 1, y −
, −z +
; (vi) −x +
, −y + 1, z −
.
Among the eight coordination sites of Ca, two are occupied by monodentate O atoms from carboxylate groups [O12—Ca1—O42 = 137.72 (3)°], with another two sites hosting water molecules [O1W—Ca1—O2W = 97.34 (3)°]. The coordination sphere of Ca1 is completed by two chelating tartrate ligands bonded by different edges, namely, O11—C1—C2—O21 and O31—C3—C4—O41. In both chelates, separation from the deprotonated O atoms to the Ca2+ cation [Ca1—O11 = 2.3733 (8) Å and Ca1—O41 = 2.4137 (9) Å] are significantly shorter compared to those of the alcohol groups [Ca1—O21 = 2.4544 (9) Å and Ca1—O31 = 2.5102 (9) Å]. These Ca—O distances range from 2.3733 (8) (Ca1—O11) to 2.5102 (9) Å (Ca—O31), which are consistent with the expected values (Ambady, 1968 ▸). It is noteworthy that this coordination of the Ca2+ ion in 1 notably differs from that of the triclinic polymorph, where the eight-coordinated Ca2+ ion is bound to two bis-chelated tartrate ligands and four water molecules.
Hydrogen bonding
The two additional water molecules fulfilling the unit cell of 1, and which are not coordinated to Ca, are involved in hydrogen-bonding interactions. The crystal lattice is mainly stabilized by electrostatics and hydrogen bonding. The tartrate anions are connected via short hydrogen bonds [O31—H31⋯O41 = 2.5529 (12) Å] in a zigzag fashion along the a axis (Fig. 4 ▸). Finally, water molecules participate in eight additional hydrogen bonds involving tartrate anions and other water molecules (Table 2 ▸).
Figure 4.
Hydrogen bonding involving tartrate anions in 1. Calcium cations and water molecules have been omitted for clarity.
Table 2. Hydrogen-bond geometry (Å, °).
D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
---|---|---|---|---|
O31—H31⋯O41vii | 0.84 (3) | 1.71 (3) | 2.5529 (12) | 174 (2) |
O21—H21⋯O4W | 0.83 (2) | 1.88 (2) | 2.7023 (13) | 174 (2) |
O1W—H2W⋯O31 | 0.82 (3) | 2.11 (3) | 2.9236 (13) | 170 (2) |
O2W—H3W⋯O3W | 0.82 (2) | 1.95 (2) | 2.7483 (13) | 164 (2) |
O2W—H4W⋯O11viii | 0.87 (2) | 2.12 (2) | 2.8658 (13) | 144 (2) |
O3W—H5W⋯O42ix | 0.90 (3) | 2.26 (3) | 3.0318 (13) | 144 (2) |
O3W—H6W⋯O11x | 0.80 (2) | 2.09 (2) | 2.8809 (13) | 168 (2) |
O4W—H7W⋯O2Wx | 0.77 (3) | 2.16 (3) | 2.9199 (14) | 170 (2) |
O4W—H8W⋯O1Wxi | 0.83 (3) | 2.31 (3) | 3.1263 (15) | 171 (2) |
Symmetry codes: (vii) ; (viii)
; (ix)
; (x)
; (xi)
.
Summary
The title calcium (2R,3R)-tartrate tetrahydrate salt (1) crystallized in the orthorhombic space group P212121, as anticipated by Evans (1935 ▸). In this work, anomalous dispersion effects in the crystal diffraction patterns led to the determination of the absolute configuration of the l-(+)-tartrate salt 1. The absolute configuration has been resolved on the basis of anomalous dispersion effects in the crystal diffraction patterns and matches the enantiomer expected from a natural wine-making process. The good crystal quality allowed for precise determination of the geometrical arrangement, particularly enabling the localization of H atoms, and therefore the observation and accurate characterization of the hydrogen-bonding network.
Supplementary Material
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S2053229624008015/dg3060sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S2053229624008015/dg3060Isup2.hkl
Additional tables. DOI: 10.1107/S2053229624008015/dg3060sup3.pdf
CCDC reference: 2377585
Acknowledgments
Financial support from the University of Zaragoza, the Aragón Government and the MCIU/AEI/FEDER is kindly acknowledged.
Funding Statement
This work was funded by Gobierno de Aragon grant E42_23R, E05_23R); MCIU/AEI/FEDER grant PID2021-122406NB-I00; MCIU/AEI/FEDER grant PID2022-137208NB-I00; Universidad de Zaragoza .
References
- Aljafree, N. F. A., Ahmad, M. F., Aziz, U. A., Borzehandani, M. Y., Jaafar, A. M., Asib, N., Nguyen, H. L., Tahir, M. I. M., Latif, M. A. M., Cordova, K. E. & Rahman, M. B. A. (2024). ACS Appl. Mater. Interfaces. In the press. doi:10.1021/acsami.3c11697.
- Ambady, G. K. (1968). Acta Cryst. B24, 1548–1557.
- Appelhans, L. N., Kosa, M., Radha, A. V., Simoncic, P., Navrotsky, A., Parrinello, M. & Cheetham, A. K. (2009). J. Am. Chem. Soc.131, 15375–15386. [DOI] [PubMed]
- Astbury, W. T. (1923). Proc. R. Soc. London A, 102, 506–528.
- Boese, R. & Heinemann, O. (1993). Z. Kristallogr.205, 348–349.
- Bruker (2016). APEX3, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA.
- Derewenda, Z. S. (2008). Acta Cryst. A64, 246–258. [DOI] [PubMed]
- Evans, H. (1935). Z. Kristallogr.A92, 154–155.
- Farrugia, L. J. (2012). J. Appl. Cryst.45, 849–854.
- Flack, H. D. (2009). Acta Cryst. A65, 371–389. [DOI] [PubMed]
- Flack, H. D. & Bernardinelli, G. (1999). Acta Cryst. A55, 908–915. [DOI] [PubMed]
- Flack, H. D. & Bernardinelli, G. (2000). J. Appl. Cryst.33, 1143–1148.
- Fukami, T., Hiyajyo, S., Tahara, S. & Yasuda, C. (2016). Am. Chem. Sci. J.16, 28258.
- Gal, J. (2008). Chirality, 20, 5–19. [DOI] [PubMed]
- Hawthorne, F. C., Borys, I. & Ferguson, R. B. (1982). Acta Cryst. B38, 2461–2463.
- Kaduk, J. A. (2007). Powder Diffr.22, 74–82.
- Le Bail, A., Bazin, D., Daudon, M., Brochot, A., Robbez-Masson, V. & Maisonneuve, V. (2009). Acta Cryst. B65, 350–354. [DOI] [PubMed]
- Parsons, S., Flack, H. D. & Wagner, T. (2013). Acta Cryst. B69, 249–259. [DOI] [PMC free article] [PubMed]
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Sheldrick, G. M. (2015). Acta Cryst. C71, 3–8.
- Spek, A. L. (2020). Acta Cryst. E76, 1–11. [DOI] [PMC free article] [PubMed]
- Ventruti, G., Scordari, F., Bellatreccia, F., Della Ventura, G. & Sodo, A. (2015). Acta Cryst. B71, 68–73. [DOI] [PubMed]
- Vries, A. J. de & Kroon, J. (1984). Acta Cryst. C40, 1542–1544.
- Wartchow, R. (1996). Z. Kristallogr.211, 329–330.
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S2053229624008015/dg3060sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S2053229624008015/dg3060Isup2.hkl
Additional tables. DOI: 10.1107/S2053229624008015/dg3060sup3.pdf
CCDC reference: 2377585