Matvei Khoroshkin
Matvei Khoroshkin
1Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA USA
2Department of Urology, University of California, San Francisco, San Francisco, CA USA
3Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA USA
4Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA USA
1,2,3,4,#,
Andrey Buyan
Andrey Buyan
5Institute of Protein Research, Russian Academy of Sciences, Pushchino, Russia
5,#,
Martin Dodel
Martin Dodel
6Centre for Cancer Cell and Molecular Biology, Barts Cancer Institute, Queen Mary University of London, London, UK
7Department of Biochemistry, University of Oxford, South Parks Road, Oxford, UK
6,7,#,
Albertas Navickas
Albertas Navickas
1Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA USA
2Department of Urology, University of California, San Francisco, San Francisco, CA USA
3Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA USA
4Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA USA
14Present Address: Institut Curie, UMR3348 CNRS, U1278 Inserm, Orsay France
1,2,3,4,14,
Johnny Yu
Johnny Yu
1Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA USA
2Department of Urology, University of California, San Francisco, San Francisco, CA USA
3Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA USA
4Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA USA
1,2,3,4,
Fathima Trejo
Fathima Trejo
8College of Arts and Sciences, University of San Francisco, San Francisco, CA USA
8,
Anthony Doty
Anthony Doty
8College of Arts and Sciences, University of San Francisco, San Francisco, CA USA
8,
Rithvik Baratam
Rithvik Baratam
1Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA USA
2Department of Urology, University of California, San Francisco, San Francisco, CA USA
3Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA USA
4Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA USA
1,2,3,4,
Shaopu Zhou
Shaopu Zhou
1Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA USA
2Department of Urology, University of California, San Francisco, San Francisco, CA USA
3Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA USA
4Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA USA
9Arc Institute, Palo Alto, CA USA
1,2,3,4,9,
Sean B Lee
Sean B Lee
1Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA USA
2Department of Urology, University of California, San Francisco, San Francisco, CA USA
3Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA USA
4Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA USA
1,2,3,4,
Tanvi Joshi
Tanvi Joshi
1Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA USA
2Department of Urology, University of California, San Francisco, San Francisco, CA USA
3Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA USA
4Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA USA
1,2,3,4,
Kristle Garcia
Kristle Garcia
1Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA USA
2Department of Urology, University of California, San Francisco, San Francisco, CA USA
3Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA USA
4Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA USA
1,2,3,4,
Benedict Choi
Benedict Choi
1Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA USA
2Department of Urology, University of California, San Francisco, San Francisco, CA USA
3Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA USA
4Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA USA
1,2,3,4,
Sohit Miglani
Sohit Miglani
1Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA USA
2Department of Urology, University of California, San Francisco, San Francisco, CA USA
3Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA USA
4Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA USA
1,2,3,4,
Vishvak Subramanyam
Vishvak Subramanyam
1Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA USA
2Department of Urology, University of California, San Francisco, San Francisco, CA USA
3Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA USA
4Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA USA
1,2,3,4,
Hailey Modi
Hailey Modi
10Gladstone Institute of Neurological Disease, San Francisco, CA USA
11Gladstone Institute of Data Science and Biotechnology, San Francisco, CA USA
12Department of Neurology, University of California San Francisco, San Francisco, CA USA
10,11,12,
Christopher Carpenter
Christopher Carpenter
1Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA USA
2Department of Urology, University of California, San Francisco, San Francisco, CA USA
3Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA USA
4Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA USA
1,2,3,4,
Daniel Markett
Daniel Markett
1Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA USA
2Department of Urology, University of California, San Francisco, San Francisco, CA USA
3Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA USA
4Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA USA
1,2,3,4,
M Ryan Corces
M Ryan Corces
10Gladstone Institute of Neurological Disease, San Francisco, CA USA
11Gladstone Institute of Data Science and Biotechnology, San Francisco, CA USA
12Department of Neurology, University of California San Francisco, San Francisco, CA USA
10,11,12,
Faraz K Mardakheh
Faraz K Mardakheh
6Centre for Cancer Cell and Molecular Biology, Barts Cancer Institute, Queen Mary University of London, London, UK
7Department of Biochemistry, University of Oxford, South Parks Road, Oxford, UK
6,7,✉,
Ivan V Kulakovskiy
Ivan V Kulakovskiy
5Institute of Protein Research, Russian Academy of Sciences, Pushchino, Russia
13Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia
5,13,✉,
Hani Goodarzi
Hani Goodarzi
1Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA USA
2Department of Urology, University of California, San Francisco, San Francisco, CA USA
3Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA USA
4Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA USA
9Arc Institute, Palo Alto, CA USA
1,2,3,4,9,✉
1Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA USA
2Department of Urology, University of California, San Francisco, San Francisco, CA USA
3Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA USA
4Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA USA
5Institute of Protein Research, Russian Academy of Sciences, Pushchino, Russia
6Centre for Cancer Cell and Molecular Biology, Barts Cancer Institute, Queen Mary University of London, London, UK
7Department of Biochemistry, University of Oxford, South Parks Road, Oxford, UK
8College of Arts and Sciences, University of San Francisco, San Francisco, CA USA
9Arc Institute, Palo Alto, CA USA
10Gladstone Institute of Neurological Disease, San Francisco, CA USA
11Gladstone Institute of Data Science and Biotechnology, San Francisco, CA USA
12Department of Neurology, University of California San Francisco, San Francisco, CA USA
13Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia
14Present Address: Institut Curie, UMR3348 CNRS, U1278 Inserm, Orsay France
Subject terms: Gene regulatory networks, Regulatory networks, RNA metabolism, Functional genomics, Data integration
© The Author(s) 2024
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