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. 1984 May 1;219(3):829–832. doi: 10.1042/bj2190829

Characterization of [4Fe-4S]2+, [4Fe-4Se]2+ and hybrid (S, Se) clusters in Clostridium pasteurianum ferredoxin. A resonance Raman study.

J M Moulis, J Meyer, M Lutz
PMCID: PMC1153550  PMID: 6743247

Abstract

Resonance Raman spectra of native 2[4Fe-4S] ferredoxin from Clostridium pasteurianum and of its selenium-substituted analogue 2[4Fe-4Se] are compared. The experimental conditions used in this study included low temperature (approx. 25K) and the absence of a glass sample cell, thus ensuring high signal-to-noise ratios. The spectra of the 2[4Fe-4S] and 2[4Fe-4Se] ferredoxins display similar numbers of bands, but the resonance Raman patterns differ largely, except for two bands observed at 353 cm-1 and 365 cm-1 in spectra of the native ferredoxin, which are only moderately shifted upon S----Se substitution and are attributed to Fe-S(cysteine) stretching modes. The activities of the latter modes, enhanced by 457.9 nm excitation, are nearly equal in both ferredoxins. These data were used to demonstrate the presence of hybrid clusters [4Fe-(4-n)S-nSe] (n = 1, 2, 3) in a ferredoxin the active sites of which had been reconstituted in the presence of both S and Se.

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Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Hong J. S., Rabinowitz J. C. The all-or-none mode of the reconstitution and the reactions of a,a'-bipyridyl and mercurials with clostridial ferredoxin. J Biol Chem. 1970 Dec 25;245(24):6574–6581. [PubMed] [Google Scholar]
  2. Johnson M. K., Spiro T. G., Mortenson L. E. Resonance Raman and electron paramagnetic resonance studies on oxidized and ferricyanide-treated Clostridium pasteurianum ferredoxin. Vibrational assignments from 34S shifts and evidence for conversion of 4 to 3 iron-sulfur clusters via oxidative damage. Vibrational assignments from 34S shifts and evidence for conversion of 4 to 3 iron-sulfur clusters via oxidative damage. J Biol Chem. 1982 Mar 10;257(5):2447–2452. [PubMed] [Google Scholar]
  3. Lutz M., Moulis J. M., Meyer J. Resonance Raman spectroscopy of Azotobacter vinelandii ferredoxin I. Vibrational features of the [3Fe-3S] cluster. FEBS Lett. 1983 Nov 14;163(2):212–216. doi: 10.1016/0014-5793(83)80821-7. [DOI] [PubMed] [Google Scholar]
  4. Meyer J., Moulis J. M. Replacement of sulfide by selenide in the [4Fe-4S] clusters of the ferredoxin from Clostridium pasteurianum. Biochem Biophys Res Commun. 1981 Nov 30;103(2):667–673. doi: 10.1016/0006-291x(81)90502-7. [DOI] [PubMed] [Google Scholar]
  5. Moulis J. M., Meyer J. Characterization of the selenium-substituted 2 [4Fe-4Se] ferredoxin from Clostridium pasteurianum. Biochemistry. 1982 Sep 14;21(19):4762–4771. doi: 10.1021/bi00262a037. [DOI] [PubMed] [Google Scholar]
  6. Mullinger R. N., Cammack R., Rao K. K., Hall D. O., Dickson D. P., Johnson C. E., Rush J. D., Simopoulos A. Physicochemical characterization of the four-iron-four-sulphide ferredoxin from Bacillus stearothermophilus. Biochem J. 1975 Oct;151(1):75–83. doi: 10.1042/bj1510075. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Spiro T. G., Gaber B. P. Laser Raman scattering as a probe of protein structure. Annu Rev Biochem. 1977;46:553–572. doi: 10.1146/annurev.bi.46.070177.003005. [DOI] [PubMed] [Google Scholar]
  8. Williams-Smith D. L., Bray R. C., Barber M. J., Tsopanakis A. D., Vincent S. P. Changes in apparent pH on freezing aqueous buffer solutions and their relevance to biochemical electron-paramagnetic-resonance spectroscopy. Biochem J. 1977 Dec 1;167(3):593–600. doi: 10.1042/bj1670593. [DOI] [PMC free article] [PubMed] [Google Scholar]

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