Skip to main content
Biochemical Journal logoLink to Biochemical Journal
. 1983 Mar 15;210(3):727–735. doi: 10.1042/bj2100727

A kinetic study of the interaction between mitochondrial F1 adenosine triphosphatase and adenylyl imidodiphosphate and guanylyl imidodiphosphate.

F J Belda, F G Carmona, F G Cánovas, J C Gómez-Fernández, J A Lozano
PMCID: PMC1154284  PMID: 6223627

Abstract

1. The presence of 5'-adenylyl imidodiphosphate, a non-hydrolysable analogue of ATP, in the solution used to assay the soluble bovine heart mitochondrial F1-ATPase produced slow competitive inhibition. If the enzyme was preincubated with the inhibitor before the substrate, MgATP, was added, a partial re-activation was obtained. 2. The slow inhibitory process showed first-order rate kinetics, and therefore it seems likely that a conformational change of the enzyme occurs following a faster binding process. A reaction scheme is suggested. At pH 7.8 the rate constant for the inhibition reaction was calculated to be 6.7 X 10(-2)s-1 and that for the re-activation 3.8 X 10(-3)s-1, with Keq. 17.6, indicating that the inhibited enzyme-inhibitor complex will be favoured over the non-inhibited enzyme-inhibitor complex. 3. The presence of 5'-guanylyl imidodiphosphate in the solution used to assay F1-ATPase produced rapid competitive inhibition, which was then slowly reversed until a steady state was reached. This might be explained by a rapid but reversible shift of the inhibition pathway induced by this non-hydrolysable analogue of ATP. A complex rate constant for the displacement of the inhibitor by the substrate of 7.6 X 10(-3)s-1 was calculated. 4. The results are discussed in the light of other recent observations about binding of 5'-adenylyl imidodiphosphate to F1-ATPase and with reference to the binding-site-change mechanism of hydrolysis of ATP by F1-ATPase.

Full text

PDF
727

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Baubichon H., Godinot C., Di Pietro A., Gautheron D. C. Competition between ADP and nucleotide analogues to occupy regulatory sites(s) related to hysteretic inhibition of mitochondrial F1-ATPase. Biochem Biophys Res Commun. 1981 Jun 16;100(3):1032–1038. doi: 10.1016/0006-291x(81)91927-6. [DOI] [PubMed] [Google Scholar]
  2. Bensadoun A., Weinstein D. Assay of proteins in the presence of interfering materials. Anal Biochem. 1976 Jan;70(1):241–250. doi: 10.1016/s0003-2697(76)80064-4. [DOI] [PubMed] [Google Scholar]
  3. Boyer P. D., Cross R. L., Momsen W. A new concept for energy coupling in oxidative phosphorylation based on a molecular explanation of the oxygen exchange reactions. Proc Natl Acad Sci U S A. 1973 Oct;70(10):2837–2839. doi: 10.1073/pnas.70.10.2837. [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. Chernyak B. C., Kozlov I. A. Adenylylimidodiphosphate release from the active site of submitochondrial particles ATPase. FEBS Lett. 1979 Aug 15;104(2):215–219. doi: 10.1016/0014-5793(79)80817-0. [DOI] [PubMed] [Google Scholar]
  5. Cross R. L., Nalin C. M. Adenine nucleotide binding sites on beef heart F1-ATPase. Evidence for three exchangeable sites that are distinct from three noncatalytic sites. J Biol Chem. 1982 Mar 25;257(6):2874–2881. [PubMed] [Google Scholar]
  6. DIXON M. The determination of enzyme inhibitor constants. Biochem J. 1953 Aug;55(1):170–171. doi: 10.1042/bj0550170. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Di Pietro A., Penin F., Godinot C., Gautheron D. C. "Hysteric" behavior and nucleotide binding sites of pig heart mitochondrial F1 adenosine 5'-triphosphatase. Biochemistry. 1980 Dec 9;19(25):5671–5678. doi: 10.1021/bi00566a002. [DOI] [PubMed] [Google Scholar]
  8. Ferguson S. J., Harris D. A., Radda G. K. The adenosine triphosphatase-inhibitor content of bovine heart submitochondrial particles. Influence of the inhibitor on adenosine triphosphate-dependent reactions. Biochem J. 1977 Feb 15;162(2):351–357. doi: 10.1042/bj1620351. [DOI] [PMC free article] [PubMed] [Google Scholar]
  9. Fernández-Belda F. J., García-Carmona F., García-Cánovas F., Lozano J. A., Gómez-Fernández J. C. Mitochondrial ATPase inactivation by interaction with its substrate. Arch Biochem Biophys. 1982 Apr 15;215(1):40–46. doi: 10.1016/0003-9861(82)90276-4. [DOI] [PubMed] [Google Scholar]
  10. Flores G. O., Acosta A., Puyou A. G. Characteristics of adenylyl imidodiphosphate- and ADP-binding sites insoluble and particulate mitochondrial ATPase. Studies with methanol. Biochim Biophys Acta. 1982 Mar 16;679(3):466–473. doi: 10.1016/0005-2728(82)90168-2. [DOI] [PubMed] [Google Scholar]
  11. Frieden C. Kinetic aspects of regulation of metabolic processes. The hysteretic enzyme concept. J Biol Chem. 1970 Nov 10;245(21):5788–5799. [PubMed] [Google Scholar]
  12. Harris D. A., Baltscheffsky M. Bound nucleotides and phosphorylation in Rhodospirillum rubrum. Biochem Biophys Res Commun. 1979 Feb 28;86(4):1248–1255. doi: 10.1016/0006-291x(79)90251-1. [DOI] [PubMed] [Google Scholar]
  13. Harris D. A., Dall-Larsen T., Klungsøyr L. Studies of the kinetics of the isolated mitochondrial ATPase using dinitrophenol as a probe. Biochim Biophys Acta. 1981 Apr 13;635(2):412–418. doi: 10.1016/0005-2728(81)90039-6. [DOI] [PubMed] [Google Scholar]
  14. Harris D. A., Gomez-Fernandez J. C., Klungsøyr L., Radda G. K. Specificity of nucleotide binding and coupled reactions utilising the mitochondrial ATPase. Biochim Biophys Acta. 1978 Dec 7;504(3):364–383. doi: 10.1016/0005-2728(78)90060-9. [DOI] [PubMed] [Google Scholar]
  15. Harris D. A. The interactions of coupling ATPases with nucleotides. Biochim Biophys Acta. 1978 Mar 10;463(3-4):245–273. doi: 10.1016/0304-4173(78)90002-2. [DOI] [PubMed] [Google Scholar]
  16. Kayalar C., Rosing J., Boyer P. D. An alternating site sequence for oxidative phosphorylation suggested by measurement of substrate binding patterns and exchange reaction inhibitions. J Biol Chem. 1977 Apr 25;252(8):2486–2491. [PubMed] [Google Scholar]
  17. Knowles A. F., Penefsky H. S. The subunit structure of beef heart mitochondrial adenosine triphosphatase. Isolation procedures. J Biol Chem. 1972 Oct 25;247(20):6617–6623. [PubMed] [Google Scholar]
  18. Krull K. W., Schuster S. M. Kinetic studies of beef heart mitochondrial adenosine triphosphatase: interaction of the inhibitor protein and adenosine triphosphate analogues. Biochemistry. 1981 Mar 17;20(6):1592–1598. doi: 10.1021/bi00509a028. [DOI] [PubMed] [Google Scholar]
  19. Melnick R. L., De Sousa J. T., Magiure J., Packer L. Action of the adenosine triphosphate analog, adenylyl imidodiphosphate in mitochondria. Arch Biochem Biophys. 1975 Jan;166(1):139–144. doi: 10.1016/0003-9861(75)90373-2. [DOI] [PubMed] [Google Scholar]
  20. Penefsky H. S. Differential effects of adenylyl imidodiphosphate on adenosine triphosphate synthesis and the partial reactions of oxidative phosphorylation. J Biol Chem. 1974 Jun 10;249(11):3579–3585. [PubMed] [Google Scholar]
  21. Penefsky H. S. Mitochondrial ATPase. Adv Enzymol Relat Areas Mol Biol. 1979;49:223–280. doi: 10.1002/9780470122945.ch6. [DOI] [PubMed] [Google Scholar]
  22. Philo R. D., Selwyn M. J. Inhibition of the soluble adenosine triphosphatase from mitochondria by adenylyl imidodiphosphate. Biochem J. 1974 Dec;143(3):745–749. doi: 10.1042/bj1430745. [DOI] [PMC free article] [PubMed] [Google Scholar]
  23. Schuster S. M., Ebel R. E., Lardy H. A. Kinetic studies on rat liver and beef heart mitochondrial ATPase. Evidence for nucleotide binding at separate regulatory and catalytic sites. J Biol Chem. 1975 Oct 10;250(19):7848–7853. [PubMed] [Google Scholar]
  24. Schuster S. M., Ebel R. E., Lardy H. A. Kinetic studies on rat liver and beef heart mitochondrial adenosine triphosphatase: the effects of the chromium complexes of adenosine triposphate and adenosine diphosphate on the kinetic properties. Arch Biochem Biophys. 1975 Dec;171(2):656–661. doi: 10.1016/0003-9861(75)90077-6. [DOI] [PubMed] [Google Scholar]
  25. Slater E. C., Kemp A., van der Kraan I., Muller J. L., Roveri O. A., Verschoor G. J., Wagenvoord R. J., Wielders J. P. The ATP-and ADP-binding sites in mitochondrial coupling factor F1 and their possible role in oxidative phosphorylation. FEBS Lett. 1979 Jul 1;103(1):7–11. doi: 10.1016/0014-5793(79)81239-9. [DOI] [PubMed] [Google Scholar]
  26. Tondre C., Hammes G. G. A kinetic study of the binding of an ADP fluorescent analog to mitochondrial ATPase. Biochim Biophys Acta. 1973 Aug 31;314(2):245–249. doi: 10.1016/0005-2728(73)90139-4. [DOI] [PubMed] [Google Scholar]
  27. Yount R. G., Babcock D., Ballantyne W., Ojala D. Adenylyl imidodiphosphate, an adenosine triphosphate analog containing a P--N--P linkage. Biochemistry. 1971 Jun 22;10(13):2484–2489. doi: 10.1021/bi00789a009. [DOI] [PubMed] [Google Scholar]

Articles from Biochemical Journal are provided here courtesy of The Biochemical Society

RESOURCES