Abstract
Purpose: A theoretical framework based on coherent reflection and filter theory predicts that the phase-gradient delays of stimulus frequency otoacoustic emissions (SFOAEs) are correlated with tuning sharpness in the mammalian cochlea. In this paper, we use a computational model of the cochlea to test this theory and to evaluate how SFOAE phase-gradient delays may be used to estimate the sharpness of cochlear tuning. Methods: This study is based on a physiologically motivated model which has been previously shown to predict key aspects of cochlear micromechanics. Cochlear roughness is introduced to model the reflection mechanism which underlies SFOAE generation. We then examine how varying the values of key model parameters or of the sound pressure level of the stimulus affects the relation between cochlear tuning and SFOAE delays. Finally, we quantify the ability of model simulations of SFOAE phase-gradient delays to provide reliable estimates of the tuning sharpness of the model. Results: We find that variations of model parameters that cause significant broadening of basilar membrane (BM) tuning typically give rise to a sizeable reduction in SFOAE phase-gradient delays. However, some changes in model parameters may cause a significant broadening of BM tuning with only a moderate decrease in SFOAE delays. SFOAE delays can be used to estimate the tuning sharpness of the model with reasonable accuracy only in cases where broadening of cochlear tuning is associated with a significant reduction in SFOAE delays. Conclusion: The numerical results provide key insights about the correlations between cochlear tuning and SFOAE delays.
Keywords: Otoacoustic emissions, Cochlear tuning, Cochlear model, Group delay
Introduction
The mammalian cochlea is a sensory system known for its sharp frequency selectivity, high sensitivity, and broad dynamic range [1]. These characteristics arise due to an active nonlinear feedback mechanism, called the cochlear amplifier, which is linked to the electromechanical response of outer hair cells (OHCs). This feedback mechanism is also responsible for the generation of sounds by the cochlea, which are called otoacoustic emissions (OAEs). OAEs are commonly measured in the ear canal (EC) to provide a simple, efficient, and noninvasive measure of cochlear function in both research and clinical practice [2]. Some OAEs are emitted due to a linear reflection mechanism caused by impedance perturbations in the cochlear partition according to coherent reflection theory [3, 4]. This includes stimulus frequency OAEs (SFOAEs), which are sounds emitted by the cochlea at the frequency of the external stimulus and are the focus of the current study. One of the key characteristics of reflection OAEs, including SFOAEs [4], is a rapidly rotating phase. The phase gradient of SFOAEs characterizes the latency of the emissions and is associated with the frequency selectivity and sharpness of tuning of the mammalian cochlea. This link between SFOAE phase-gradient delay and tuning sharpness can be explained by a theoretical framework that combines the theory of coherent reflection and filter theory [5].
The theory of coherent reflection predicts that the normalized SFOAE phase-gradient delay (expressed in number of periods), , is linked to the normalized phase-gradient delay of the BM at the best place (BP), . More specifically, the ratio of to the phase-gradient delay of the pressure difference waves at BP is expected to be two since SFOAE requires round-trip wave propagation; however, the ratio of to the BM group delay at BP, , is predicted to be a bit less than two due to the difference between the group delays of the BM response and fluid pressure [5]. Filter theory predicts the relation between and the sharpness of tuning of the BM (which can be evaluated using the equivalent rectangular bandwidth quality factor, ). If the type and order of cochlear filters are assumed to be the same across longitudinal locations and across species, the relation between and is expected to remain invariant. Combined with the theory of coherent reflection, this theoretical framework implies that the SFOAE tuning ratio (defined as the ratio of to ) is invariant across locations and species. Experiments have shown that the tuning ratio is indeed approximately invariant among cats, guinea pigs, and chinchillas, at least for characteristic frequencies (CFs) above the apical-basal transition [5]. This opened the possibility of determining cochlear tuning from SFOAE phase-gradient delay [5]. Using the SFOAE group delay to estimate cochlear tuning in humans led to the conclusion that human ears are more sharply tuned than those of other species [5]. However, the theoretical framework underlying the estimation of cochlear tuning from SFOAE delays (coherent reflection theory and filter theory) relies on a series of assumptions and approximations. One of the key assumptions is that the type and order of cochlear filters are invariant; another one is that the ratio of SFOAE delays to BM delays is invariant.
In this work, we aim to test this theoretical framework using our previously developed cochlear model. After comparing the BM and SFOAE responses of the model to available experimental data in gerbils, we study how changes in cochlear tuning are correlated with changes in SFOAE phase-gradient delays. To vary the sharpness of cochlear tuning and SFOAE delays, the values of key model parameters or the stimulus level are varied. We then examine whether the simulated values for can be used to estimate the sharpness of cochlear tuning in the model. Analysis of the numerical results gives new insights about the link between SFOAE delays and cochlear tuning.
Methods
Cochlear Model
This work is based on a three-dimensional (3D) model of the gerbil cochlea. This model, which couples mechanical, electrical, and acoustical domains, has been described in detail in previous works [6, 7]. The micromechanical model of the organ of Corti (OoC) includes one degree of freedom (DOF) for the BM and two DOFs for the TM (shear and bending) at each longitudinal cross-section. Within each cross-section, elastic springs represent the elasticity of the BM, TM attachment to the spiral limbus, reticular lamina (RL), OHC main body, and hair bundle (HB) [8]. Furthermore, these cross-sections are directly coupled to each other via structural longitudinal coupling, which is considered in the BM and TM, as described in Ref. [9].
The micromechanical model and the electrical model are coupled to each other due to mechano-electrical transduction (MET) and somatic electromotility. The MET current is a nonlinear function of the angular deflection of the OHC HB relative to the reticular lamina, :
| 1 |
where is the length of the HB; and are constant values; is the resting open probability of the HB MET channel; and is the saturating MET current and is given by where is the saturating MET conductance and is the resting value of the difference between the scala media potential and the intracellular OHC potential. Somatic electromotility is modeled using linear reciprocal equations:
| 2 |
| 3 |
where is the electromechanical coupling coefficient. Equation 2 relates the OHC compression rate to the somatic current . Equation 3 relates the OHC transmembrane potential (, defined as the difference between the intracellular OHC potential and the scala tympani potential) and the force applied by the OHCs on the BM and RL in the extension direction, .
All results except for the study of the effect of sound pressure level were obtained using a linear frequency-domain implementation of the model. The study of the effect of sound pressure level is based on a nonlinear time-domain implementation of the model. The use of a linear frequency-domain model is advantageous as this model runs much faster than the nonlinear time-domain model. The nonlinear model converges to the linear model at low stimulus levels (20 dB SPL and below).
Except for the parameters listed in the table in Table 1, all parameter values for the baseline model are identical to the values used in our previous paper [7]. The smooth version of the cochlear model (i.e., the version of the model without cochlear roughness, which is introduced in the next subsection) has been calibrated based on previously published in vivo BM measurements in gerbils at four different locations: the 18 kHz [10] (Fig. 1 A and F), 26 kHz [11] (Fig. 1 B and G), 35.5 kHz [12] (Fig. 1 C and H), and 45.5 kHz [13] (Fig. 1 D and I) characteristic places (CPs). The values of model parameters were chosen such that the active to passive gain of the model is similar to that observed experimentally; however, the model gain is a few dB higher than experiments, especially at the 26 kHz CP. Appendix 2 shows the responses of a model with reduced MET current and illustrates how reducing MET conductance to bring the gain closer to that observed experimentally has little effect on the relationships between tuning sharpness and group delays.
Table 1.
Updated mechanical and electrical parameters for cochlear model, where x is the longitudinal position in cm
| Param. | Description | Value in Ref. [7] | Value in present study |
|---|---|---|---|
| TM shear stiffness (per unit length) | N/m | N/m | |
| Basolateral capacitance (per OHC) | 17.45x pF | pF | |
| Basolateral conductance (per OHC) | nS | nS | |
| Saturating HB MET conductance (per HB) | Interpolated from | Interpolated from | |
| 97.6 nS at x=0 cm | 109.5 nS at x=0 cm | ||
| 94.3 nS at x=0.13 cm | 87.2 nS at x=0.13 cm | ||
| 74.9 nS at x=0.224 cm | 70.9 nS at x=0.224 cm | ||
| 56.2 nS at x=0.32 cm | 56.9 nS at x=0.32 cm | ||
| 38.4 nS at x=0.44 cm | 42.5 nS at x=0.44 cm | ||
| 18.8 nS at x=0.67 cm | 23.0 nS at x=0.67 cm | ||
| 1.97 nS at x=1.12 cm | 17.4 nS at x=0.75 cm | ||
| 2.0 nS at x=1.12 cm |
The model assumes 1000 sections per cm, each with 3 OHCs
Fig. 1.
Comparison of the pure tone responses predicted by the nonlinear model to in vivo experiments in gerbil. A–C and F–H The amplitude and phase of the BM velocity relative to the stapes velocity; D and I the amplitude and phase of the BM velocity relative to the EC pressure. For the amplitude, experimental curves were shifted vertically so that they overlap with the model in the low-frequency tail of the curves. Simulations (solid lines) are compared to measurements (dashed lines) in individual animals at 18 kHz CP from He and Ren [10] in A and F; at the 26 kHz CP from He and Ren [11] in B and G; at the 35.5 kHz CP from Overstreet et al. [12] in C and H; and at the 45.5 kHz CP from Cho et al. [13] in D and I. Model SPLs are from 20 to 90 dB in 10 dB steps. Experimental SPLs are from 20 to 80 dB in A, 30 to 80 dB in B, and 20 to 90 dB in C, all in 10 dB steps. In D, experimental SPLs are 58, 66, 78, 86, and 92 dB. The experimentally measured phases in F–I are plotted at a single stimulus level (20 dB SPL; 30 dB SPL in G; 70 dB SPL in H; 58 dB SPL in I). E of the BM velocity at low SPL. J Normalized group delay, () of the BM at the CP at low SPL. Simulations in E and J are compared to experimental measurements in gerbils (average of data for animals) from Charaziak and Shera [16]
The equivalent rectangular bandwidth (ERB) of the smooth model BM response was used to calculate the quality factor, :
| 4 |
where is the equivalent rectangular bandwidth at the local characteristic frequency, [14]. Note that the characteristic frequency (CF) and best frequency (BF) both refer to the frequency of maximum BM response at a fixed longitudinal location: CF corresponds to the frequency of the maximum response for low-level stimuli, whereas BF refers to the level-dependent frequency of maximum response [15]. Similarly, the CP is the location of maximum response for low-level stimuli of a given frequency, whereas the BP is the level-dependent location of maximum response. is predicted to increase as CF increases (Fig. 1E), in a manner similar to in vivo measurements in gerbil from Ref. [16]. However, the predicted phase has a steeper slope than experiments around the CF (Fig. 1 F–I), implying that the model overpredicts the BM group delay at CF. The normalized group delay at CF expressed in number of cycles, , is plotted as a function of CF in Fig. 1J. The simulated increases as CF increases, as observed in the experimental results in the gerbil cochlea reported by Charaziak and Shera [16]. However, the slope of the vs. CF curve is shallower than in the experiments; furthermore, the simulated values are higher than the experimental values by a factor of 1.5 to 2.5. The simulated values are also above the experimental values in the model with reduced MET current shown in Appendix 2.
Cochlear Roughness and SFOAE Simulations
In order to simulate reflection OAEs, cochlear roughness is introduced in the BM stiffness. In the model with cochlear roughness, the BM stiffness of the smooth model, , is perturbed according to the equation:
| 5 |
where r(x) is a number generated by a random number generation based on a normal distribution with a standard deviation of one, and is the standard deviation of the perturbations from the smooth case. has been used throughout this work for the rough models as this value results in similar SFOAE levels and fine structure as in experiments in gerbils [16]. A random number seed (RNS) is used in the model to initialize the random number generator, which enables the possibility of simulating a family of various roughness profiles by using different RNS values. Simulations with different RNS values mimic the measurement of OAEs in multiple cochleae.
Calculation of the SFOAE is based on the reflection component in the EC pressure, which is the vector difference between the steady-state pure tone response of the models with and without roughness (smooth model). This method, which is advantageous because it can be applied to linear frequency-domain simulations, differs from the nonlinear compression and suppression methods, which are typically used in experiments. We showed in Ref. [17] that the method used in the current paper yields SFOAE amplitudes and phases that are nearly identical to those obtained using the nonlinear compression method. Vencovsky et al. [18] have also shown using their nonlinear cochlear model that the method currently used here yields nearly identical results to the nonlinear compression method and suppression method at least for frequencies above 0.9 kHz; however, short latency components may be present when the compression or suppression methods are used. The short latency components present when the compression method or the suppression method is applied would not affect the key results of this paper as they would be filtered out by the method introduced in the next section.
Robust Calculation of SFOAE Group Delays
SFOAEs are the summation of multiple components of different delays, which include a short latency component and components of longer latency corresponding to multiple internal reflections [19]. Interference between these multiple components can complicate the interpretation of SFOAEs and introduce bias (overestimation) in obtaining the phase-gradient delays. The link between BM tuning and SFOAE phase-gradient delay is expected to be strong only if the first reflection component is considered. To determine the first reflection component, the following method, illustrated in Fig. 2, is applied. The SFOAEs as a function of frequency (shown in Fig. 2 A and C) are first converted to the time-domain by applying an inverse fast Fourier transform (IFFT) (the black line in Fig. 2B) and are then transformed into time-frequency representations by using continuous wavelet transform (CWT) (Fig. 2D), in a similar manner to the method proposed by Moleti et al. [20]. The CWT provides the constituent time-varying spectral components of the SFOAE. To identify the 1st reflection component, the group delay of the BM predicted by the smooth model at the frequency-dependent best place, , is first calculated. Time-frequency filtering is applied over the CWT to identify the short latency (delays less than 1), 1st reflection (delays between 1 and 3) and 2nd reflection (delays between 3 and 5) components. These components can be visualized in the time domain (red, gold, and blue lines in Fig. 2B). After applying a fast Fourier transform, the amplitude and phase of the 1st and 2nd reflection components are obtained in the frequency domain (Fig. 2 A and C).
Fig. 2.
Illustration of applying time-frequency filtering and of the peak-picking method. Amplitude (A) and phase (C) of SFOAE predicted by the baseline linear cochlear model with roughness (with RNS ). B Inverse fast Fourier transform of the SFOAE response. D Time-frequency distribution of SFOAE response by using continuous wavelet transform (CWT). White curves indicate 1, 3, and 5 times the phase-gradient delay of BM responses at CF; these curves are used as guidelines to filter the SFOAE responses into short latency, and and reflection components. E SFOAE phase-gradient delay, . In A–C and E, the black, red, blue, and gold lines represent the total SFOAE response (i.e., unfiltered response), the first reflection component, the second reflection component, and the short latency component, respectively; the red dots correspond to the frequencies of the peaks of the 1st reflection component and to the frequencies just below and just above the peaks. The SFOAE delays are evaluated at the frequencies identified by the peak-picking method
The peak-picking algorithm is then implemented [19]. This method only considers the values of the group delay near frequencies corresponding to peaks in the SFOAE level of the 1st reflection component. Here, the peak-picking selection includes the peak itself and one point on either side of the peak (Fig. 2A). To obtain the curve of phase-gradient delay of SFOAE vs. frequency, the time-frequency filtering and peak-picking method was applied to simulations obtained with multiple RNS (64 RNS values for linear simulations; 16 RNS values for nonlinear simulations), before applying loess smoothing [19] using a span of 50% to establish the general trend for the group delay vs. frequency curve (e.g., Fig. 3C).
Fig. 3.
Model overview of SFOAE characteristics in response to a 20 dB SPL stimulus. Amplitude (A) and phase (B) of the 1st reflection component of the SFOAE predicted for 3 different RNS values. C plotted vs. frequency. Dots in C show for 64 RNS, where each point is calculated at the frequency of the peak-picking method applied to the reflection component of the SFOAE. The solid line is a loess fit of the points using a span of 50%. The dashed line corresponds to . D. plotted vs. . In C, the experimental data (average of animals) are from Charaziak and Shera [16]. In D, the blue line is the following empirical equation from Charaziak and Shera [16]: where corresponds to the quality factor of the BM
Variations in the Model Parameters and in the Stimulus Level
Three model parameters were varied from their baseline values used in the calibrated model to study how changes in cochlear tuning are correlated with changes in SFOAE group delays. For all these variations, the state-space formulation of the model allows us to check the linear stability of each case before running the frequency-domain simulations [21, 22], which is important because a linear frequency-domain simulation would not be meaningful in case of a model with a linear instability (i.e., a model that predicts the generation of a spontaneous OAE). For each parameter, the variation was parameterized using a non-dimensional scaling factor, defined such that a value of one corresponds to the baseline, fully active, and calibrated model shown in Fig. 1.
The first parameter is the saturating MET current, , which was parameterized using the non-dimensional scaling factor . corresponds to a passive model; a value between 1 and 0 corresponds to partial loss of OHC function (either due to a reduction in the MET channel saturating conductance or to reduction in linked to a reduction in the endocochlear potential, which is one possible source of age-related hearing loss [23]). In this study, is varied between 1 and 0.44.
The second parameter is the TM longitudinal coupling scaling factor (), which scales the values of longitudinal sti-ffness and viscosity of the TM [9] from their baseline values [6]. Experimental studies, which have examined how genetic mu-tations that affect the TM proteins alter TM properties and cochlear function in some transgenic mice [24–26], and the theoretical results from Ref. [9], which showed that TM longitudinal coupling tends to broaden cochlear tuning, motivate us to study the effect of on SFOAE delays. In the current study, longitudinal coupling was increased by varying between 1 and 8 in order to broaden cochlear tuning.
The third model parameter that has been varied is the OoC impedance scaling factor (). scales the stiffness of OHCs, RL, and hair bundles (HBs), as well as the bending stiffness, mass, and damping of TM from the corresponding baseline values. This variation is motivated by our recent results which showed that the impedance of OoC components affects the tuning of the BM vibrations [7]. was varied between 1 and 0.4.
In addition to these three parameter variations, a nonlinear implementation of the baseline model was run at stimulus le-vels from 0 to 60 dB SPL to evaluate how an increase in SPL affects the link between cochlear tuning and SFOAE delays.
Results
SFOAE Predictions of the Baseline Cochlear Model
Figure 3A and B shows the amplitude and phase of the SFO-AEs predicted by the baseline cochlear model with roughness for three different RNS values, which mimic measurements in different cochleae. For each RNS, the amplitude has many peaks and valleys, i.e., fine structure, which depend on the RNS value. The predicted SFOAE has approximately the same level as observed in gerbils in response to low-level stimuli [16]; howe-ver, the model predictions seem to lack the broad macrostructure observed in these experiments, where SFOAE drops to a low level over a relatively broad frequency range. The SFOAE phase has a steep slope and accumulates about 25–30 cycles from 10 to 30 kHz. The SFOAE phase-gradient delay was calculated based on the procedure described in the methods, i.e., time-frequency filtering was applied to isolate the 1st reflection component before applying the peak-picking method. Throughout the results, the phase-gradient delay, was expressed in number of cycles:
| 6 |
where refers to the phase of the SFOAE expressed in radians and f is the frequency in Hz. The phase-gradient delays at the peak-picked frequencies are aggregated using simulations of all 64 RNS values using a loess fit and plotted as the normalized phase-gradient delay (red dots in Fig. 3C). The loess fit of the predicted for all RNS values generally increases as frequency increases and is slightly less than , where refers to the BM group delay expressed in number of cycles. Despite significant variability, the values predicted from individual RNS (the dots in Fig. 3C) follow this general trend. In a manner consistent with the overestimation of the BM phase slope in Fig. 1, the predicted tends to be above measurements in gerbils by a factor 2 to 2.3.
The correlation between and tuning sharpness is evaluated by plotting as a function of . As the frequency is swept, Fig. 3D shows that the variations in and are correlated, in both model predictions (at least for frequencies up to 30 kHz) and experiments in gerbils: the broader tuning observed at more apical locations is generally associated with lower normalized group delays. However, as observed in Fig. 3C, the predicted values are significantly above the measured values.
Note that throughout the paper, and are calculated using the smooth model. This approach cannot be directly followed in an experiment since roughness cannot be eliminated. However, we show in Appendix 3 that the model with roughness yields values of and that are nearly identical to those obtained with the smooth model if filtering is applied to eliminate the secondary reflections.
Effect of Changes in Parameters or Stimulus Level on BM and SFOAE Responses
Figure 4 shows the effect of varying model parameters or stimulus level on the amplitude and phase of the BM response and of SFOAEs predicted for one single RNS. In all cases, the changes in model parameters or increase in the SPL cause (1) a reduction in the amplitude of the BM velocity response (Fig. 4 A–D), (2) a broadening of the BM velocity response (Fig. 4 E–H), and (3) a reduction in the SFOAE amplitude (Fig. 4 I–L). In cases of reduced HB current, increased TMLC, and increased SPL, these changes in amplitudes and tuning sharpness are associated with decreases in the peak frequency (Fig. 4 A, B, and D) and in the slopes of the phase of both the BM velocity (Fig. 4 I, J, and K) and SFOAE (Fig. 4 Q, R, and T), implying that the group delays are significantly reduced. However, in the case of varied OoC parameters, the peak frequency increases (Fig. 4C) and the slope of the phase responses is not affected as significantly as in the other cases (Fig. 4 K and S).
Fig. 4.
Effect of varying model parameters and the level of the stimulus on BM velocity and SFOAEs. Amplitude (A–H) and phase (I–L) of the BM velocity relative to the EC pressure. In A–D, the longitudinal location is fixed to the 20 kHz CP of the smooth baseline model; in this case, the BF varies as the parameter varies. In E–L, the longitudinal location is varied so that all curves peak at the same frequency of 20 kHz. Keeping the peak frequency invariant facilitates the comparison of the shape of the amplitude response and of the slope of the phase response. M–T SFOAE amplitude relative to the EC pressure (M–P) and SFOAE phase (Q–T) relative to the SFOAE phase at 10 kHz. The SFOAE results are the filtered SFOAE with the first reflection only for a single RNS. In the last column, the sound pressure level was varied from 0 to 60 dB SPL
Figure 5 shows and plotted as a function of the scaling factor used to control each parameter variation. All parameters were varied such that the range of is roughly similar for all parameter variations (from 6.6 in the baseline model to 3, as seen in the 1st row of Fig. 5). However, is observed to vary much more significantly in the cases of the decreased HB current, increased TMLC, and increased stimulus level than in the case of varied OoC parameters (2nd row of Fig. 5). Overall, a monotonic trend is observed between the scaling factor and . is close to in the baseline case. In all cases, as the parameter variations cause a reduction in , the loess fit of progressively deviates slightly from the curve.
Fig. 5.
Effect of parameter variations and changes in stimulus level on BM tuning sharpness and phase-gradient delay. A–D of the BM velocity, evaluated at the 20 kHz BP. E–H is plotted at 20 kHz. The loess fit of the predicted by the model with roughness for multiple RNS values is compared to (obtained with the smooth model)
Relation Between SFOAE Delays and Cochlear Tuning
Figure 6 shows how the variations in model parameters or in the SPL of the stimulus affect the relation between and . For all parameter variations, is positively correlated with (Fig. 6A, solid lines). In the case of increased TMLC, is nearly proportional to as it follows the black dashed line. The curve vs. deviates from a proportional relation in the three other cases. The curve vs. is below the proportional line in the case of decreased MET current and increased SPL; the opposite trend is observed in the case of decreased OoC impedance. In all cases, the curves for vs. are slightly below the corresponding vs. curve (dotted lines).
Fig. 6.

Link between SFOAE delays and cochlear tuning. A (thick solid lines) and (thin dotted lines) plotted as a function of . B BM (thin dotted lines) and SFOAE (thick solid lines) tuning ratios, and . The black thin dashed lines in A and B correspond to a constant tuning ratio of 0.3374, which is the tuning ratio of the baseline model. C Ratio of to
The link between and can also be examined by calculating the SFOAE tuning ratio, defined as [5]. is nearly invariant in the case of increased TMLC. Decreasing the MET current or increasing the SPL causes moderate, non-monotonic variations of . However, varying the OoC parameters causes a significant decrease in . The variations in are the consequence of two factors, which can be understood by writing as the product of two terms:
| 7 |
where is the BM tuning ratio, which is plotted in thin dotted lines in Fig. 6B. In this analysis, corresponds to the BM group delay evaluated at the BP of the model for the chosen values of the parameters or stimulus level. varies significantly in the case of varied OoC parameters, which can be interpreted as a change in the type and/or order of the BM filters as the parameter varies. Moreover, in all cases, the ratio , which is plotted in Fig. 6C, also varies; for all parameter variations, a reduction of is associated with a nearly monotonic decrease in this ratio. When is large, this ratio approaches 2; as decreases, the ratio drops progressively to around 1.7 to 1.85 depending on the parameter variation.
How Do Simulations Predict ?
The fact that is approximately proportional to (or equivalently that the SFOAE tuning ratio is nearly invariant) suggests that measuring can directly be used to estimate . This is what was used by Shera et al. [27] to estimate cochlear tuning in humans at the population level. We evaluate in Fig. 7 how simulations of can be used to estimate the of the model, both for the case of the predicted for a single RNS, and for the loess fit of multiple RNSs. Even in the case of a computer simulation which is not affected by noise and measurement errors, the ability of using a single measurement to estimate is more challenging due to the inherent variability of linked to the generation mechanism of SFOAE.
Fig. 7.
Estimation of based on simulations. A Comparison of the predicted for a single simulation (RNS=2) for (thin magenta line) to the least squares fit using Eq. 8 (thick magenta line). The trend line obtained using the loess fit of 64 RNS for is shown in a thick black dotted line for reference. B Comparison of calculated from the fit of SFOAE delay at 20 kHz shown in A using Eq. 9 to the true value directly calculated from the predicted BM response, . C–F The percent relative error between and is plotted as a function of in the case of decreased (C), increased TMLC (D), decreased (E), and increased SPL (F). The dots correspond to individual RNS cases; the solid lines and the shaded area represent the mean and ± one standard deviation, respectively. The black dotted line in C–F is the error for the estimated based on the loess fit of all RNS
Figure 7A illustrates the process used to estimate for a single simulation. The group delay predicted for a single RNS value at an MET scaling factor of 0.80 is shown in a thin magenta line, along with the peak-picked values indicated using dots. We chose to quantify the error in the -based estimate of at a single frequency of 20 kHz which is the midpoint of the frequency range of 10 to 30 kHz used for these simulations. To reliably estimate at 20 kHz for that single simulation, the peak-picked values of were fitted using a linear function of frequency:
| 8 |
The least square fit, , plotted in a thick magenta line, captures the general trend seen in the simulation for the chosen RNS value. Furthermore, this fit is close, but not identical, to the loess fit of the 64 RNS for the considered in this simulation.
kHz) is used to estimate at 20 kHz by using the equation:
| 9 |
where is the SFOAE tuning ratio of the baseline model. The process was repeated for all values. For the RNS value used in Fig. 7B, the estimate of based on Eq. 9 is observed to approximately follow the curve directly calculated from simulations of the BM response.
To quantify the precision and accuracy of this method, the percent relative error in the estimate of was calculated as follows:
| 10 |
where refers to the true value of , (i.e., the value directly obtained from the simulation of the BM response) and refers to the value obtained from . is plotted as a function of the true in Fig. 7 C–F for the variations in model parameters or stimulus levels. The dots show the error for individual RNS values. In the case of decreased , increased , and increased SPL, the error is relatively small (less than 20% for all individual RNS). The mean error (shown in a solid line) is negative in the case of decreased and increased SPL, which is due to the fact that, in these cases, the curve is above the constant curve in Fig. 6A. The mean error is very close to 0 in the varied TMLC case and remains less than 10% in the decreased case. However, the method overestimates by large errors of up to 70% in the case of increased , which is due to the deviation of from the constant case in Fig. 6A. These results show that predicted for a single ear allows for an estimate of of reasonable accuracy (errors of up to 20%) for the varied MET, TMLC, and level cases. However, for the case of varied that affects significantly the shape of the BM response but not the SFOAE delays, the method is unable to estimate reliably.
The mean error of the predicted for all RNS tends to be slightly negative in the case of decreased , increased TMLC, and increased SPL. This error is linked to the fact that the SFOAE tuning ratio drops slightly below the value of the baseline model in Fig. 6B. Another approach for multiple RNS is to use the loess fit to directly obtain at 20 kHz, before using this value in Eq. 9 to calculate an estimate of . The estimate based on the loess fit, shown in a black dotted line in Fig. 7 C–F, is observed to be nearly identical to the mean error shown in the solid line.
Discussion
This work utilizes a physiologically motivated model of the gerbil cochlea to investigate how changes in cochlear tuning affect SFOAE phase-gradient delays. After calibration, the baseline model predicts a similar BM amplitude response as in in vivo measurements in gerbils, with similar values (Fig. 1). However, the group delays of the BM response and of SFOAEs are higher than in experiments by a factor of around two. The slope of the vs. frequency curve is predicted to be shallower than in experiments. Computational models of the cochlea that rely on coherent reflection have been previously used to simulate SFOAEs and study their generation mechanisms and key characteristics [17, 18, 28, 29]. While these previous models have not been used to systematically study the link between the sharpness of cochlear tuning and SFOAE delays, they often predict higher group delays than in experiments (e.g., [28]). More phenomenological models can be more easily tuned to predict more realistic SFOAE group delays [30].
Another way to evaluate the SFOAE predicted by the model is by examining the ratio of SFOAE group delays to BM group delays. The baseline model predicts that the ratio of SFOAE group delay to BM group delay is near two (1.95), which is a bit higher than has been observed in experiments: has been found to vary between and , depending on the species, including 1.6 in gerbils [16]. In the current model, SFOAEs originate primarily from the peak of the traveling wave. Because this model has purely local OHC feedback, the delays of forward and reverse waves are nearly identical, such that the SFOAE delay is about twice the BM group delay in the case of a sharply tuned model. The finite element model from Motallebzadeh and Puria [28], which includes non-local OHC feedback due to the cytoarchitecture of the organ of Corti, predicts a much lower value for of about 0.6. Shera and Altoe [30] demonstrated that varying the locality of the OHC feedback allows to vary significantly. They concluded that the values reported in experiments for suggest that the OHC feedback is primarily local; however, introducing a small amount of non-locality in our model by accounting for the longitudinal tilt of OHCs might be needed to lower the predictions of our model for to values closer to experiments.
The limitations in the accuracy of the predictions of the baseline model should not deter from using the model in improving understanding of the correlations between tuning sharpness and SFOAE phase-gradient delays. In order to limit the computational cost, the study of the effect of model parameter variations on and was conducted using a linear frequency-domain implementation of the model, such that the results obtained here only directly apply to SFOAEs measured in response to the stimulus of level up to about 20 dB SPL. However, the findings are expected to be qualitatively similar for higher sound pressure levels. All model parameter variations considered in this article cause concurrent changes in and , i.e., reductions in are associated with lower . and are nearly proportional to each other in the case of increased TM longitudinal coupling; the relationship between and is close to being proportional in the decreased HB current case but not in the varied OoC impedance case. This lack of proportionality in the varied OoC impedance case arises because the BM tuning ratio is significantly affected by the parameter variations. The filter theory used by Shera [5] to interpret the relationship between group delay and tuning sharpness relies on the assumption that the overall transfer function between input (EC pressure) and output (BM displacement) can be represented as a filter of fixed type (for example, a gammatone filter) and order. The type and order of the BM filters are not directly available in the model as these depend on the hydrodynamics of the fluid, the micromechanics of the organ of Corti, and the electromechanical feedback from OHCs. Nevertheless, it may be possible to fit (or approximate) the transfer function of the BM response using specific filters. As discussed by Shera, for a given filter of fixed order, bandwidth and group delay are simply related: for example, for a gammatone filter of order n, the normalized group delay N is related to the quality factor by the equation: [31]. The lack of invariance of the BM tuning ratio in the varied OoC impedance case suggests that the effect of this parameter’s variation cannot be captured by a simple change in the parameters of fixed type and order of the BM filter, but that the type and/or order of the filter changes when the parameter is varied. The possibility that the tuning ratio may change significantly needs to be kept in mind when SFOAE phase-gradient delays are used to estimate cochlear tuning in multiple species, or in animals with altered properties (such as transgenic mice with altered TM protein expressions [26]).
In addition to this change in the tuning ratio, all parameter variations affect the ratio of to : in all cases, the broadening of cochlear tuning is correlated with a moderate reduction in . With broader tuning, the SFOAE generation region becomes broader and the size of contributions from locations basal to the peak increases relative to contributions from the peak. This shift in the SFOAE generation is the likely source of the reduction of the to ratio.
The effect of increasing sound pressure level is predicted to be quite similar to the effect of directly reducing the MET current. The nonlinear model predicts that increases in SPL cause broadening of BM tuning, and decreases in BM and SFOAE delays (of the 1st reflection component), as observed in experiments. This relation between and when SPL is increased is similar, but not identical, to the trend observed when the MET current is reduced. As observed in the experimental data from Charaziak and Shera [16], the BM tuning ratio is nearly level-independent when SPL is increased, such that is predicted to be nearly proportional to . The ratio of to is predicted to depend weakly on SPL. Although Charaziak and Shera observed that the ratio of of the 1st reflection component to is nearly constant when stimulus level is varied, our model predicts that the broadening of cochlear tuning at higher SPL is associated with somewhat lower to ratios (Fig. 6C).
The use of our model allows us to evaluate how SFOAE delays may be used to estimate the sharpness of cochlear tuning. We focus not only on group-level predictions (i.e., for multiple RNS values in Fig. 7), as done previously in experiments in different species, but also on predictions for a single RNS (which represent data from a single ear). The method assumes that and are proportional to each other. When applied at the population level (i.e., when estimations for multiple RNS values are averaged, either based on the loess fitting or by taking the median of individual estimates), the only source of error is the lack of exact proportionality between and . Because a proportional relation between and is a decent approximation in the case of varied MET current and TMLC, the population level estimates of are within a few percents of the directly predicted values. A somewhat larger error is observed for the case of varied stimulus level due to the larger deviation from proportionality. However, when the varied, the error can reach very large values due to the lack of proportionality between and , making the method useless.
Estimation of from a single simulation (or experiment) is more challenging due to variability of the vs. frequency curve for a single RNS. It is essential to extract a meaningful trend for the curve of vs. frequency, which is representative of cochlear tuning rather than of the inherent variability of the coherent reflection mechanism. To eliminate the variability, the values of were fitted using a simple linear function of frequency; other functional dependencies for the curve were considered (not shown), but this did not significantly affect the results. The error between the estimated using a single simulation and the true is somewhat larger than the error observed at the population level, but remains reasonable (i.e., less than 20%) in the decreased MET current and increased TMLC cases. For the single RNS case, this error arises from two sources: 1) the error in the estimation of the trendline and 2) error in the relation between and (i.e., is not exactly proportional to ).
In conclusion, the use of a computational model allows us to study the link between the sharpness of cochlear tuning and SFOAE delays in a well-controlled environment. We found that most model parameter variations cause nearly proportional variations in and , making it possible to estimate from . However, the numerical results highlight the fact that it may be possible for changes in model parameters to cause non-proportional changes in and .
Acknowledgements
No AI was used for either manuscript preparation or research purposes.
Appendix 1: Table of Model Parameters
Appendix 2: Comparison of Model with Reduced to Experiments
The tuning and delays of a model with reduced MET current () are compared to experiments and to the baseline model () in Fig. 8. The first row of Fig. 8 shows a reduction in the sensitivity of the BM responses for the model with . The second row of Fig. 8 shows reduced (Fig. 8D), , and (Fig. 8E) for the model with in comparison to the baseline. Even though the model with reduced MET current predicts a BM amplitude response that nearly matches (at the 26 kHz and 35.5 kHz CPs) or even below (at the 18 kHz CP) the experimental curves, the BM and SFOAE delays of this model remain significantly above the experimental values. The link between tuning sharpness and delays, upon which our analysis rests, is unaffected by the exact values of , , and of the baseline model.
Fig. 8.
Effect of reduced on tuning and delays. A–C The amplitude of BM velocity relative to stapes velocity. D and E of the BM velocity and normalized group delays, respectively. Experimental responses are at 20 dB SPL in A and at 30 dB SPL in B and C and correspond to the same experiments in Fig. 1 of the main text. Model responses are of the active linear model using (baseline model) and . Simulations in E and J are compared to experimental measurements in gerbils from Charaziak and Shera [16]
Appendix 3: Calculation of and Using Filtered Response of Model with Roughness
Introducing roughness affects the frequency response of the BM to a pure tone (Fig. 9 A and C): with roughness, the amplitude and normalized group delay curve have a fine structure. If the and at BF are directly calculated from the response of the rough models, there is variability in the calculated values (Fig. 9 B and D). While the median value of the calculated for all RNS is nearly identical to the calculated for the smooth model, the median is significantly above the of the smooth model. To obtain more reliable estimates of and , we applied filtering on the IFFT of the response of the model with roughness (Fig. 9E) to eliminate the lobes of longer delays due to secondary reflections. The FFT of this filtered IFFT looks nearly identical to the smooth model response near BF and lacks any fine structure in this region (Fig. 9 A and C). As a result, the and values are nearly independent of the RNS and are nearly identical to the values obtained with the smooth model (Fig. 9 B and D).
Fig. 9.
Comparison of and calculation using rough unfiltered, rough filtered, and smooth BM responses. A, C, and E The unfiltered, filtered, and smooth BM response amplitude (A), normalized group delay (C), and waveform (E) for one RNS. B and D Median (bar height) and IQR (error bar) of (B) and (D) calculated with unfiltered and filtered BM response, using 64 simulations with different RNS values and . The smooth value is also shown for reference in B and D
Author contribution
Conceptualization: JM. Methodology: YX, GS, JM. Investigation: YX, GS, JM. Visualization: YX, GS, JM. Funding acquisition: JM. Project administration: JM. Supervision: SM. Writing—original draft: YX, JM. Writing—review and editing: JM and GS.
Funding
This research was funded by NIH Grant R01 DC016114.
Data Availability
Data sets generated during the current study are available from the corresponding author on reasonable request.
Code Availability
Codes written during the current study are available from the corresponding author on reasonable request
Declarations
Conflict of Interest
The authors declare no competing interests.
Footnotes
Publisher's Note
Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Yiwei Xia and George Samaras contributed equally to this work.
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Data Availability Statement
Data sets generated during the current study are available from the corresponding author on reasonable request.
Codes written during the current study are available from the corresponding author on reasonable request








