Abstract
The amino acid sequence between residues 70 and 116 of the V (variable) region of the H (heavy) chain derived from rabbit antibody BS-5, specific for type III pneumococcal polysaccharide, was determined. The sequence of this section of the H chain which includes the hypervariable residues 94 to about 112 was unique, although minor variant sequences present in the H chain preparation would not have been detected by the techniques used in this work. Taken together with the known sequences of the N-terminal 69 residues of H chain BS-5 (Jaton & Braun, 1972) and of the V region of the light chain (Jaton, 1974b), the data establish the complete sequence of the V domain of a rabbit immunoglobulin G. The V region of H chain BS-5 is compared with the basic sequences of the three human V region subgroups known to date, with one mouse H chain, and with guinea-pig pooled H chains. Even though chains from guinea pig and mouse clearly belong to the subgroup III of variability (VHIII), rabbit H chain BS-5 (allotypic variant a1) appears more closely related to the subgroup VHII than to the subgroups VHIII or VHI. The homology between VL and VH regions of antibody BS-5 (28%) is not greater than that observed between the VH region of antibody BS-5 and the VL regions of different rabbit antibodies.
Full text
PDF









Selected References
These references are in PubMed. This may not be the complete list of references from this article.
- Appella E., Roholt O. A., Chersi A., Radzimski G., Pressman D. Amino acid sequence of the light chain derived from a rabbit anti-p-azobenzoate antibody of restricted heterogeneity. Biochem Biophys Res Commun. 1973 Aug 21;53(4):1122–1129. doi: 10.1016/0006-291x(73)90581-0. [DOI] [PubMed] [Google Scholar]
- Bourgois A., Fougereau M., De Preval C. Sequence of amino acids of the NH 2 -terminal region of a mouse-clonal immunoglobulin heavy chain. Eur J Biochem. 1972 Jan 21;24(3):446–455. doi: 10.1111/j.1432-1033.1972.tb19705.x. [DOI] [PubMed] [Google Scholar]
- Bourgois Alain, Fougereau Michel. Partial amino acid sequence of the variable region of a mouse gammaG2a immunoglobulin heavy chain. Evidence for the existence of a third sub-group of variability for the heavy chain pool. FEBS Lett. 1970 Jun 27;8(5):265–268. doi: 10.1016/0014-5793(70)80283-6. [DOI] [PubMed] [Google Scholar]
- Braun D. G., Jaton J. C. Homogeneous antibodies: induction and value as probe for the antibody problem. Curr Top Microbiol Immunol. 1974;66:29–76. doi: 10.1007/978-3-642-65908-9_2. [DOI] [PubMed] [Google Scholar]
- Braun D. G., Jaton J. C. The aminoterminal sequence of antibody light chains: evidence for possible inheritance of structural genes. Immunochemistry. 1973 Jun;10(6):387–395. doi: 10.1016/0019-2791(73)90090-6. [DOI] [PubMed] [Google Scholar]
- Braunitzer G., Schrank B., Ruhfus A., Petersen S., Petersen U. Zur vollständigen automatischen Sequenzanalyse von Peptiden mit Quadrol. Hoppe Seylers Z Physiol Chem. 1971 Dec;352(12):1730–1732. [PubMed] [Google Scholar]
- Campbell J. H., Pappenheimer A. M., Jr Quantitative studies of the specificity of anti-pneumococcal polysaccharide antibodies, types 3 and 8. II. Inhibition of precipitin reactions with oligosaccharides isolated from hydrolysates of S3 and S8. Immunochemistry. 1966 May;3(3):213–222. doi: 10.1016/0019-2791(66)90185-6. [DOI] [PubMed] [Google Scholar]
- Capra J. D., Wasserman R. L., Kehoe J. M. Phylogenetically associated residues within the VH3 subgroup of several mammalian species. Evidence for a "pauci-gene" basis for antibody diversity. J Exp Med. 1973 Aug 1;138(2):410–427. doi: 10.1084/jem.138.2.410. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Cebra J. J., Givol D., Porter R. R. Common peptides from the N-terminal half of heavy chain of immunoglobulin G from normal rabbit serum and a specific antibody. Biochem J. 1968 Mar;107(1):69–77. doi: 10.1042/bj1070069. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Chen K. C., Kindt T. J., Krause R. M. Amino-acid sequence of an allotype b4 light chain from a rabbit antibody to streptococcal carbohydrate. Proc Natl Acad Sci U S A. 1974 May;71(5):1995–1998. doi: 10.1073/pnas.71.5.1995. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Edman P. Sequence determination. Mol Biol Biochem Biophys. 1970;8:211–255. doi: 10.1007/978-3-662-12834-3_8. [DOI] [PubMed] [Google Scholar]
- Fleischman J. B. A partial amino acid sequence in the heavy chain of a rabbit antibody to group C streptococcal carbohydrate. Biochemistry. 1971 Jul 6;10(14):2753–2761. doi: 10.1021/bi00790a016. [DOI] [PubMed] [Google Scholar]
- Freedman M. H., Sela M. Recovery of specific activity upon reoxidation of completely reduced polyalanyl rabbit antibody. J Biol Chem. 1966 Nov 25;241(22):5225–5232. [PubMed] [Google Scholar]
- Fruchter R. G., Jackson S. A., Mole L. E., Porter R. R. Sequence studies of the Fd section of the heavy chain of rabbit immunoglobulin G. Biochem J. 1970 Jan;116(2):249–259. doi: 10.1042/bj1160249. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Givol D. Structural analysis of the antibody combining site. Contemp Top Mol Immunol. 1973;2:27–50. doi: 10.1007/978-1-4684-7773-3_2. [DOI] [PubMed] [Google Scholar]
- HABER E. RECOVERY OF ANTIGENIC SPECIFICITY AFTER DENATURATION AND COMPLETE REDUCTION OF DISULFIDES IN A PAPAIN FRAGMENT OF ANTIBODY. Proc Natl Acad Sci U S A. 1964 Oct;52:1099–1106. doi: 10.1073/pnas.52.4.1099. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Haber E. Homogeneous elicited antibodies: induction, characterization, isolation, and structure. Ann N Y Acad Sci. 1971 Dec 31;190:285–305. doi: 10.1111/j.1749-6632.1971.tb13542.x. [DOI] [PubMed] [Google Scholar]
- Hermodson M. A., Ericsson L. H., Titani K., Neurath H., Walsh K. A. Application of sequenator analyses to the study of proteins. Biochemistry. 1972 Nov 21;11(24):4493–4502. doi: 10.1021/bi00774a011. [DOI] [PubMed] [Google Scholar]
- Inbar D., Hochman J., Givol D. Localization of antibody-combining sites within the variable portions of heavy and light chains. Proc Natl Acad Sci U S A. 1972 Sep;69(9):2659–2662. doi: 10.1073/pnas.69.9.2659. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Jaton J. C. Amino acid sequence of the N-terminal 139 residues of light chain derived from a homogeneous rabbit antibody. Biochem J. 1974 Jul;141(1):1–13. doi: 10.1042/bj1410001. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Jaton J. C., Braun D. G. Amino acid sequence of the N-terminal sixty-nine residues of heavy chain derived from a homogeneous rabbit antibody. Biochem J. 1972 Nov;130(2):539–546. doi: 10.1042/bj1300539. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Jaton J. C. Comparison of the amino acid sequences of the variable regions of light chains derived from two homogeneous rabbit anti-pneumococcal antibodies. Biochem J. 1974 Jul;141(1):15–25. doi: 10.1042/bj1410015. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Jaton J. C., Haimovich J. Partial amino acid sequence in the N-terminal region of an anti-pneumococcal immunoglobulin heavy chain of allotype alpha2. Biochem J. 1974 Apr;139(1):281–283. doi: 10.1042/bj1390281. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Jaton J. C., Klinman N. R., Givol D., Sela M. Recovery of antibody activity upon reoxidation of completely reduced polyalanyl heavy chain and its Fd fragment derived from anti-2,4-dinitrophenyl antibody. Biochemistry. 1968 Dec;7(12):4185–4195. doi: 10.1021/bi00852a008. [DOI] [PubMed] [Google Scholar]
- Kabat E. A., Wu T. T. Attempts to locate complementarity-determining residues in the variable positions of light and heavy chains. Ann N Y Acad Sci. 1971 Dec 31;190:382–393. doi: 10.1111/j.1749-6632.1971.tb13550.x. [DOI] [PubMed] [Google Scholar]
- Kehoe J. M., Capra J. D. Sequence relationships among the variable regions of immunoglobulin heavy chains from various mammalian species. Proc Natl Acad Sci U S A. 1972 Aug;69(8):2052–2055. doi: 10.1073/pnas.69.8.2052. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Koo P. H., Cebra J. J. Affinity labeling of a distinctive lysyl residue within the second hypervariable region of gamma 2 chain of guinea pig anti-p-azobenzenearsonate antibody. Biochemistry. 1974 Jan 1;13(1):184–195. doi: 10.1021/bi00698a028. [DOI] [PubMed] [Google Scholar]
- Krause R. M. The search for antibodies with molecular uniformity. Adv Immunol. 1970;12:1–56. doi: 10.1016/s0065-2776(08)60167-4. [DOI] [PubMed] [Google Scholar]
- Melville J. Labile glutamine peptides, and their bearing on the origin of the ammonia set free during the enzymic digestion of proteins. Biochem J. 1935;29(1):179–186. doi: 10.1042/bj0290179. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Milstein C., Pink J. R. Structure and evolution of immunoglobulins. Prog Biophys Mol Biol. 1970;21:209–263. doi: 10.1016/0079-6107(70)90026-x. [DOI] [PubMed] [Google Scholar]
- Niall H. D. Automated Edman degradation: the protein sequenator. Methods Enzymol. 1973;27:942–1010. doi: 10.1016/s0076-6879(73)27039-8. [DOI] [PubMed] [Google Scholar]
- Offord R. E. Electrophoretic mobilities of peptides on paper and their use in the determination of amide groups. Nature. 1966 Aug 6;211(5049):591–593. doi: 10.1038/211591a0. [DOI] [PubMed] [Google Scholar]
- Pressman D., Roholt O. A., Grossberg A. L. Chemical and structural differences between antibodies capable of binding a particular hapten group: evidence for limited heterogeneity. Ann N Y Acad Sci. 1970 Feb 13;169(1):65–71. doi: 10.1111/j.1749-6632.1970.tb55971.x. [DOI] [PubMed] [Google Scholar]
- Speyer J. L., Emans J. B., Kimball J. W., Pappenheimer A. M., Jr Quantitative studies of the specificity of anti-pneumococcal polysaccharide antibodies, types 3 and 8. V. Cross-reacting antibodies in rabbit antisera. Immunochemistry. 1973 Apr;10(4):257–263. doi: 10.1016/0019-2791(73)90203-6. [DOI] [PubMed] [Google Scholar]
- WHITNEY P. L., TANFORD C. RECOVERY OF SPECIFIC ACTIVITY AFTER COMPLETE UNFOLDING AND REDUCTION OF AN ANTIBODY FRAGMENT. Proc Natl Acad Sci U S A. 1965 Mar;53:524–532. doi: 10.1073/pnas.53.3.524. [DOI] [PMC free article] [PubMed] [Google Scholar]
