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. 2024 Dec 3;9(Pt 12):x241144. doi: 10.1107/S2414314624011441

rac-2-{3-[1-(Acet­yloxy)eth­yl]-2,2-di­methyl­cyclobut­yl}acetic acid

Dieter Schollmeyer a, Paul Jirsch a, Heiner Detert a,*
Editor: M Bolteb
PMCID: PMC11701758  PMID: 39777011

The title compound was prepared from α-pinene in three steps. The ester and acid moieties are cis on the slightly folded cyclo­butane ring. In the crystal, carb­oxy­lic acid bound dimers form layers parallel to (202).

Keywords: crystal structure, cyclo­butane, strain

Abstract

The title compound, C12H20O4, was prepared from α-pinene in three steps. The ester and acid moieties are cis on the slightly folded cyclo­butane ring. In the crystal, carb­oxy­lic acid bound dimers form layers parallel to (202).graphic file with name x-09-x241144-scheme1-3D1.jpg

Structure description

As part of a project on strained carbocycles (Detert & Schollmeyer, 2017; Herges et al., 2005), the title compound, C12H20O4 (Fig. 1), was prepared from racemic α-pinene by permanganate oxidation, borohydride reduction of the pinonic acid to pinolic acid and acetyl­ation. The compound crystallizes in the monoclinic space group C2/c with the asymmetric unit containing eight mol­ecules. Two enanti­omeric mol­ecules are connected via two hydrogen bridges of the carb­oxy­lic acids, forming centrosymmetric dimers. The distance between the oxygen atoms forming the hydrogen bond is 2.6547 (13) Å. These dimers are arranged in layers parallel to the (Inline graphic02) plane (Table 1, Fig. 2). The central cyclo­butane ring is folded in a butterfly-like manner: the planes defined by C1,C2,C4 and by C2, C3, C4 subtend an angle of 24.61 (12)°, which is due to the bulky methyl groups at C2. However, it is significantly smaller than the ideal angle of 35° (Bucourt, 1974). The acetic acid substituent on C1 and the acet­oxy­ethyl on C3 are cis and on the open side of the folded cyclo­butane. The geminal methyl groups on C2 open an angle of 110.39 (10)° and provoke an elongation of the cyclo­butane bond lengths e.g. C1—C2 = 1.5697 (15) Å versus C1—C4 = 1.5467 (15) Å. A deviation of only 0.0193 (10) Å for O8 destroys the otherwise perfect planarity of the acetic acid unit O7,O8,C5,C6.

Figure 1.

Figure 1

View of the title compound. Displacement ellipsoids are drawn at the 50% probability level.

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O8—H8O⋯O7i 0.90 (2) 1.75 (2) 2.6547 (13) 178 (2)

Symmetry code: (i) Inline graphic.

Figure 2.

Figure 2

Part of the packing diagram. Hydrogen bonds are drawn with dashed lines. View along the [101] direction. The color of the mol­ecules corresponds to the generating symmetry operator.

Synthesis and crystallization

The title compound was prepared from α-pinene by phase-transfer-catalyzed oxidation with permanganate according to Hünig et al. (1979) (43% yield) followed by reduction with sodium borohydride according to Fernández et al. (2001) (94% yield). The resulting diastereomeric mixture of pinolic acids (2.00 g) was dissolved in benzene (5 ml), acetic acid (2.58 g) and toluene­sulfonic acid (0.47 g) were added. The mixture was refluxed for 3.5 h and water was separated using a Dean–Stark trap. The mixture was washed with water, the aqueous phase extracted with toluene and the combined organic layers were dried and the solvents removed in vacuo. The residue thus obtained was dissolved in heptane (5 ml), treated with active charcoal and filtered. Upon cooling, the mixture separated into two phases, the lower layer was dissolved in heptane (15 ml) and upon cooling for 3 days. The precipitated solid was recrystallized from heptane to yield 0.22 g (9%) of colorless crystals with m.p. = 360–362 K. Hergueta et al. (2003) report a melting point of the enanti­opure compound of 258-258 K. Their NMR data correspond well with the results from the racemate, except a general deep-field shift of all H-NMR signals and a high-field shift of ca 0.25 p.p.m. in C-NMR. The numbering of H- and C-signals follows IUPAC nomenclature. 1H-NMR (300 MHz, CDCl3): δ = 4.77 (dq, J = 10.2, 6.2 Hz, 1H, 1′′-H), 2.41–2.15 (m, 3H, 2-H, 1′-H), 2.14–1.93 (m, 2H, 3′-H, 4′-H), 2.00 (s, 3H, 4′′-H), 1.30–1.16 (m, 1H, 4′-H), 1.08 (s, 3H, 5′′-H), 1.06 (d, J = 6.2 Hz, 3H, 2′′-H), 0.88 (s, 3H, 6′′-H). 13C-NMR (101 MHz, CDCl3): δ = 179.3 (C-1), 170.7 (C-3′′), 71.9 (C-1′′), 47.1 (C-3′), 40.0 (C-2′), 37.9 (C-1′), 35.0 (C-2), 30.5 (C-5′′), 26.5 (C-4′), 21.6 (C-4′′), 17.7 (C-2′′), 16.9 (C-6′′).

Refinement

Crystal data, data collection and structure refinement details are summarized in Table 2.

Table 2. Experimental details.

Crystal data
Chemical formula C12H20O4
M r 228.28
Crystal system, space group Monoclinic, C2/c
Temperature (K) 120
a, b, c (Å) 9.8411 (4), 12.3319 (5), 21.0912 (10)
β (°) 94.254 (4)
V3) 2552.56 (19)
Z 8
Radiation type Mo Kα
μ (mm−1) 0.09
Crystal size (mm) 0.55 × 0.29 × 0.25
 
Data collection
Diffractometer Stoe IPDS 2T
Absorption correction Integration [X-RED32 (Stoe & Cie, 2020), absorption correction by Gaussian integration (Coppens, 1970)]
Tmin, Tmax 0.966, 0.982
No. of measured, independent and observed [I > 2σ(I)] reflections 6713, 3019, 2607
R int 0.023
(sin θ/λ)max−1) 0.658
 
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.040, 0.110, 1.03
No. of reflections 3019
No. of parameters 215
H-atom treatment All H-atom parameters refined
Δρmax, Δρmin (e Å−3) 0.35, −0.17

Computer programs: X-AREA WinXpose, Recipe and Integrate (Stoe & Cie, 2020), SHELXT2014 (Sheldrick, 2015a), SHELXL2019/2 (Sheldrick, 2015b) and PLATON (Spek, 2020).

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S2414314624011441/bt4161sup1.cif

x-09-x241144-sup1.cif (238.9KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S2414314624011441/bt4161Isup2.hkl

x-09-x241144-Isup2.hkl (241.7KB, hkl)
x-09-x241144-Isup3.cml (5.1KB, cml)

Supporting information file. DOI: 10.1107/S2414314624011441/bt4161Isup3.cml

CCDC reference: 2405160

Additional supporting information: crystallographic information; 3D view; checkCIF report

full crystallographic data

rac-2-{3-[1-(Acetyloxy)ethyl]-2,2-dimethylcyclobutyl}acetic acid . Crystal data

C12H20O4 F(000) = 992
Mr = 228.28 Dx = 1.188 Mg m3
Monoclinic, C2/c Mo Kα radiation, λ = 0.71073 Å
a = 9.8411 (4) Å Cell parameters from 9202 reflections
b = 12.3319 (5) Å θ = 2.7–28.4°
c = 21.0912 (10) Å µ = 0.09 mm1
β = 94.254 (4)° T = 120 K
V = 2552.56 (19) Å3 Block, colourless
Z = 8 0.55 × 0.29 × 0.25 mm

rac-2-{3-[1-(Acetyloxy)ethyl]-2,2-dimethylcyclobutyl}acetic acid . Data collection

Stoe IPDS 2T diffractometer 3019 independent reflections
Radiation source: sealed X-ray tube, 12x0.4mm long-fine focus 2607 reflections with I > 2σ(I)
Detector resolution: 6.67 pixels mm-1 Rint = 0.023
rotation method, ω scans θmax = 27.9°, θmin = 2.7°
Absorption correction: integration [X-Red32 (Stoe & Cie, 2020), absorption correction by Gaussian integration (Coppens, 1970)] h = −12→12
Tmin = 0.966, Tmax = 0.982 k = −16→16
6713 measured reflections l = −27→22

rac-2-{3-[1-(Acetyloxy)ethyl]-2,2-dimethylcyclobutyl}acetic acid . Refinement

Refinement on F2 Primary atom site location: dual
Least-squares matrix: full Hydrogen site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040 All H-atom parameters refined
wR(F2) = 0.110 w = 1/[σ2(Fo2) + (0.0554P)2 + 1.746P] where P = (Fo2 + 2Fc2)/3
S = 1.03 (Δ/σ)max < 0.001
3019 reflections Δρmax = 0.35 e Å3
215 parameters Δρmin = −0.17 e Å3
0 restraints

rac-2-{3-[1-(Acetyloxy)ethyl]-2,2-dimethylcyclobutyl}acetic acid . Special details

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Hydrogen atoms were freely refined, constraining the displacement parameters of H atoms bonded to the same C atom to the same values.

rac-2-{3-[1-(Acetyloxy)ethyl]-2,2-dimethylcyclobutyl}acetic acid . Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 0.40274 (11) 0.82757 (9) 0.44466 (5) 0.0212 (2)
H1 0.3386 (14) 0.8179 (12) 0.4752 (7) 0.021 (3)*
C2 0.32858 (11) 0.80492 (9) 0.37750 (5) 0.0212 (2)
C3 0.30462 (11) 0.93023 (9) 0.37194 (5) 0.0210 (2)
H3 0.2131 (14) 0.9476 (11) 0.3853 (7) 0.022 (3)*
C4 0.41585 (12) 0.94836 (9) 0.42633 (6) 0.0230 (2)
H4A 0.3951 (15) 1.0022 (13) 0.4595 (8) 0.028 (3)*
H4B 0.5044 (15) 0.9629 (12) 0.4101 (7) 0.028 (3)*
C5 0.53464 (12) 0.76965 (10) 0.46563 (6) 0.0255 (3)
H5A 0.6042 (16) 0.7761 (13) 0.4351 (8) 0.033 (3)*
H5B 0.5742 (16) 0.8011 (13) 0.5037 (8) 0.033 (3)*
C6 0.51864 (12) 0.65089 (9) 0.47940 (5) 0.0227 (2)
O7 0.40910 (9) 0.60728 (7) 0.48459 (5) 0.0320 (2)
O8 0.63537 (9) 0.59850 (8) 0.48631 (5) 0.0330 (2)
H8O 0.619 (2) 0.5291 (17) 0.4968 (10) 0.052 (5)*
C9 0.42329 (14) 0.76090 (11) 0.32965 (6) 0.0285 (3)
H9A 0.4498 (16) 0.6864 (14) 0.3401 (8) 0.034 (2)*
H9B 0.5078 (16) 0.8031 (13) 0.3281 (8) 0.034 (2)*
H9C 0.3767 (16) 0.7584 (13) 0.2863 (8) 0.034 (2)*
C10 0.19969 (13) 0.73714 (10) 0.37673 (6) 0.0269 (3)
H10A 0.1379 (17) 0.7659 (14) 0.4077 (8) 0.039 (2)*
H10B 0.2197 (16) 0.6612 (15) 0.3872 (8) 0.039 (2)*
H10C 0.1509 (17) 0.7390 (14) 0.3334 (9) 0.039 (2)*
C11 0.32282 (12) 0.98916 (10) 0.31042 (6) 0.0247 (3)
H11 0.4032 (15) 0.9670 (12) 0.2925 (7) 0.024 (3)*
C12 0.32133 (16) 1.11163 (11) 0.31801 (7) 0.0358 (3)
H12A 0.3994 (18) 1.1323 (15) 0.3481 (9) 0.045 (3)*
H12B 0.2328 (19) 1.1347 (15) 0.3341 (9) 0.045 (3)*
H12C 0.3331 (17) 1.1457 (15) 0.2758 (9) 0.045 (3)*
O13 0.20759 (8) 0.95683 (8) 0.26638 (4) 0.0268 (2)
C14 0.22864 (12) 0.95332 (10) 0.20432 (6) 0.0250 (3)
O15 0.33550 (9) 0.97409 (10) 0.18328 (5) 0.0382 (3)
C16 0.10262 (15) 0.92018 (13) 0.16498 (7) 0.0345 (3)
H16A 0.025 (3) 0.940 (2) 0.1833 (14) 0.099 (5)*
H16B 0.102 (3) 0.847 (3) 0.1585 (14) 0.099 (5)*
H16C 0.106 (3) 0.951 (2) 0.1231 (16) 0.099 (5)*

rac-2-{3-[1-(Acetyloxy)ethyl]-2,2-dimethylcyclobutyl}acetic acid . Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0229 (5) 0.0191 (5) 0.0212 (5) 0.0011 (4) −0.0002 (4) 0.0006 (4)
C2 0.0227 (5) 0.0198 (5) 0.0209 (5) −0.0007 (4) 0.0006 (4) −0.0001 (4)
C3 0.0212 (5) 0.0205 (5) 0.0211 (5) 0.0004 (4) −0.0006 (4) 0.0008 (4)
C4 0.0266 (6) 0.0184 (5) 0.0232 (6) 0.0010 (4) −0.0038 (4) −0.0004 (4)
C5 0.0238 (6) 0.0213 (6) 0.0307 (6) 0.0011 (4) −0.0030 (5) 0.0020 (5)
C6 0.0251 (5) 0.0216 (5) 0.0211 (5) 0.0034 (4) −0.0003 (4) 0.0000 (4)
O7 0.0248 (4) 0.0223 (4) 0.0490 (6) 0.0033 (3) 0.0036 (4) 0.0072 (4)
O8 0.0240 (4) 0.0237 (5) 0.0513 (6) 0.0044 (3) 0.0029 (4) 0.0077 (4)
C9 0.0315 (6) 0.0269 (6) 0.0273 (6) 0.0014 (5) 0.0050 (5) −0.0042 (5)
C10 0.0267 (6) 0.0252 (6) 0.0284 (6) −0.0050 (5) −0.0013 (5) 0.0001 (5)
C11 0.0209 (5) 0.0278 (6) 0.0246 (6) −0.0020 (4) −0.0034 (4) 0.0041 (4)
C12 0.0419 (8) 0.0264 (6) 0.0376 (8) −0.0038 (6) −0.0082 (6) 0.0099 (5)
O13 0.0204 (4) 0.0375 (5) 0.0221 (4) −0.0027 (3) −0.0011 (3) 0.0039 (3)
C14 0.0247 (5) 0.0256 (6) 0.0246 (6) 0.0044 (4) 0.0006 (4) 0.0040 (4)
O15 0.0265 (5) 0.0596 (7) 0.0290 (5) 0.0018 (4) 0.0048 (4) 0.0074 (4)
C16 0.0332 (7) 0.0422 (8) 0.0271 (7) −0.0029 (6) −0.0033 (5) −0.0010 (6)

rac-2-{3-[1-(Acetyloxy)ethyl]-2,2-dimethylcyclobutyl}acetic acid . Geometric parameters (Å, º)

C1—C5 1.5183 (15) C9—H9A 0.976 (17)
C1—C4 1.5467 (15) C9—H9B 0.983 (16)
C1—C2 1.5697 (15) C9—H9C 0.992 (17)
C1—H1 0.942 (14) C10—H10A 0.991 (17)
C2—C10 1.5182 (16) C10—H10B 0.979 (18)
C2—C9 1.5235 (16) C10—H10C 1.000 (18)
C2—C3 1.5664 (15) C11—O13 1.4669 (13)
C3—C11 1.5092 (16) C11—C12 1.5189 (18)
C3—C4 1.5421 (15) C11—H11 0.942 (15)
C3—H3 0.987 (14) C12—H12A 0.993 (19)
C4—H4A 0.996 (16) C12—H12B 0.999 (19)
C4—H4B 0.976 (15) C12—H12C 1.000 (19)
C5—C6 1.5036 (16) O13—C14 1.3410 (15)
C5—H5A 0.977 (17) C14—O15 1.1990 (15)
C5—H5B 0.948 (17) C14—C16 1.4970 (18)
C6—O7 1.2169 (15) C16—H16A 0.91 (3)
C6—O8 1.3166 (14) C16—H16B 0.91 (3)
O8—H8O 0.90 (2) C16—H16C 0.96 (3)
C5—C1—C4 116.13 (10) C2—C9—H9A 110.6 (10)
C5—C1—C2 120.62 (10) C2—C9—H9B 113.2 (10)
C4—C1—C2 89.29 (8) H9A—C9—H9B 107.1 (13)
C5—C1—H1 110.1 (8) C2—C9—H9C 111.0 (9)
C4—C1—H1 111.4 (9) H9A—C9—H9C 106.0 (13)
C2—C1—H1 107.7 (8) H9B—C9—H9C 108.7 (13)
C10—C2—C9 110.39 (10) C2—C10—H10A 110.4 (10)
C10—C2—C3 114.92 (9) C2—C10—H10B 111.7 (10)
C9—C2—C3 113.45 (10) H10A—C10—H10B 108.5 (14)
C10—C2—C1 116.09 (10) C2—C10—H10C 110.0 (10)
C9—C2—C1 113.26 (10) H10A—C10—H10C 108.5 (14)
C3—C2—C1 87.10 (8) H10B—C10—H10C 107.7 (14)
C11—C3—C4 116.54 (10) O13—C11—C3 106.14 (9)
C11—C3—C2 120.84 (10) O13—C11—C12 108.90 (10)
C4—C3—C2 89.58 (8) C3—C11—C12 112.67 (11)
C11—C3—H3 108.0 (8) O13—C11—H11 107.5 (9)
C4—C3—H3 111.7 (8) C3—C11—H11 111.2 (9)
C2—C3—H3 109.2 (8) C12—C11—H11 110.2 (9)
C3—C4—C1 88.78 (8) C11—C12—H12A 108.0 (11)
C3—C4—H4A 116.6 (9) C11—C12—H12B 109.5 (11)
C1—C4—H4A 116.2 (9) H12A—C12—H12B 111.3 (15)
C3—C4—H4B 111.7 (9) C11—C12—H12C 108.8 (11)
C1—C4—H4B 111.0 (9) H12A—C12—H12C 109.0 (15)
H4A—C4—H4B 111.0 (13) H12B—C12—H12C 110.2 (15)
C6—C5—C1 114.51 (10) C14—O13—C11 117.31 (9)
C6—C5—H5A 107.2 (9) O15—C14—O13 123.89 (11)
C1—C5—H5A 113.3 (9) O15—C14—C16 124.51 (12)
C6—C5—H5B 106.1 (10) O13—C14—C16 111.60 (11)
C1—C5—H5B 110.0 (10) C14—C16—H16A 112.2 (18)
H5A—C5—H5B 105.1 (13) C14—C16—H16B 110.6 (18)
O7—C6—O8 123.00 (11) H16A—C16—H16B 109 (2)
O7—C6—C5 123.65 (10) C14—C16—H16C 108.8 (17)
O8—C6—C5 113.35 (10) H16A—C16—H16C 112 (2)
C6—O8—H8O 108.9 (12) H16B—C16—H16C 104 (2)
C5—C1—C2—C10 106.21 (12) C5—C1—C4—C3 141.48 (11)
C4—C1—C2—C10 −133.49 (10) C2—C1—C4—C3 17.33 (9)
C5—C1—C2—C9 −23.05 (15) C4—C1—C5—C6 −176.63 (10)
C4—C1—C2—C9 97.25 (11) C2—C1—C5—C6 −70.71 (15)
C5—C1—C2—C3 −137.38 (11) C1—C5—C6—O7 −12.44 (18)
C4—C1—C2—C3 −17.08 (8) C1—C5—C6—O8 168.52 (11)
C10—C2—C3—C11 −104.29 (12) C4—C3—C11—O13 178.53 (9)
C9—C2—C3—C11 24.05 (14) C2—C3—C11—O13 71.76 (13)
C1—C2—C3—C11 138.19 (10) C4—C3—C11—C12 −62.37 (14)
C10—C2—C3—C4 134.65 (10) C2—C3—C11—C12 −169.14 (10)
C9—C2—C3—C4 −97.01 (11) C3—C11—O13—C14 −149.15 (10)
C1—C2—C3—C4 17.13 (9) C12—C11—O13—C14 89.30 (13)
C11—C3—C4—C1 −142.07 (10) C11—O13—C14—O15 0.61 (18)
C2—C3—C4—C1 −17.37 (9) C11—O13—C14—C16 −179.50 (11)

rac-2-{3-[1-(Acetyloxy)ethyl]-2,2-dimethylcyclobutyl}acetic acid . Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
O8—H8O···O7i 0.90 (2) 1.75 (2) 2.6547 (13) 178 (2)

Symmetry code: (i) −x+1, −y+1, −z+1.

References

  1. Bucourt, R. (1974). Topics in Stereochemistry, vol. 8, pp. 159–224. New York: Wiley.
  2. Coppens, P. (1970). Crystallographic Computing, edited by F. R. Ahmed, pp. 255–270. Munksgaard, Copenhagen.
  3. Detert, H. & Schollmeyer, D. (2017). IUCrData, 2, x171550.
  4. Fernández, F., Hergueta, A. R., López, C., De Clercq, E. & Balzarini, J. (2001). Nucleosides Nucleotides Nucleic Acids, 20, 1129–1131. [DOI] [PubMed]
  5. Herges, R., Papafilippopoulos, A., Hess, C., Chiappe, C., Lenoir, D. & Detert, H. (2005). Angew. Chem.117, 1437–1441. [DOI] [PubMed]
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  8. Sheldrick, G. M. (2015a). Acta Cryst. A71, 3–8.
  9. Sheldrick, G. M. (2015b). Acta Cryst. C71, 3–8.
  10. Spek, A. L. (2020). Acta Cryst. E76, 1–11. [DOI] [PMC free article] [PubMed]
  11. Stoe & Cie (2020). X-RED and X-AREA. Stoe & Cie, Darmstadt, Germany.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S2414314624011441/bt4161sup1.cif

x-09-x241144-sup1.cif (238.9KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S2414314624011441/bt4161Isup2.hkl

x-09-x241144-Isup2.hkl (241.7KB, hkl)
x-09-x241144-Isup3.cml (5.1KB, cml)

Supporting information file. DOI: 10.1107/S2414314624011441/bt4161Isup3.cml

CCDC reference: 2405160

Additional supporting information: crystallographic information; 3D view; checkCIF report


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