Skip to main content
The EMBO Journal logoLink to The EMBO Journal
. 1998 Dec 1;17(23):6903–6911. doi: 10.1093/emboj/17.23.6903

AtPIN2 defines a locus of Arabidopsis for root gravitropism control.

A Müller 1, C Guan 1, L Gälweiler 1, P Tänzler 1, P Huijser 1, A Marchant 1, G Parry 1, M Bennett 1, E Wisman 1, K Palme 1
PMCID: PMC1171038  PMID: 9843496

Abstract

The molecular mechanisms underlying gravity perception and signal transduction which control asymmetric plant growth responses are as yet unknown, but are likely to depend on the directional flux of the plant hormone auxin. We have isolated an Arabidopsis mutant of the AtPIN2 gene using transposon mutagenesis. Roots of the Atpin2::En701 null-mutant were agravitropic and showed altered auxin sensitivity, a phenotype characteristic of the agravitropic wav6-52 mutant. The AtPIN2 gene was mapped to chromosome 5 (115.3 cM) corresponding to the WAV6 locus and subsequent genetic analysis indicated that wav6-52 and Atpin2::En701 were allelic. The AtPIN2 gene consists of nine exons defining an open reading frame of 1944 bp which encodes a 69 kDa protein with 10 putative transmembrane domains interrupted by a central hydrophilic loop. The topology of AtPIN2p was found to be similar to members of the major facilitator superfamily of transport proteins. We have shown that the AtPIN2 gene was expressed in root tips. The AtPIN2 protein was localized in membranes of root cortical and epidermal cells in the meristematic and elongation zones revealing a polar localization. These results suggest that AtPIN2 plays an important role in control of gravitropism regulating the redistribution of auxin from the stele towards the elongation zone of roots.

Full Text

The Full Text of this article is available as a PDF (530.7 KB).

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Altschul S. F., Gish W., Miller W., Myers E. W., Lipman D. J. Basic local alignment search tool. J Mol Biol. 1990 Oct 5;215(3):403–410. doi: 10.1016/S0022-2836(05)80360-2. [DOI] [PubMed] [Google Scholar]
  2. Baluska F., Hasenstein K. H. Root cytoskeleton: its role in perception of and response to gravity. Planta. 1997;203(Suppl):S69–S78. doi: 10.1007/pl00008117. [DOI] [PubMed] [Google Scholar]
  3. Bennett M. J., Marchant A., Green H. G., May S. T., Ward S. P., Millner P. A., Walker A. R., Schulz B., Feldmann K. A. Arabidopsis AUX1 gene: a permease-like regulator of root gravitropism. Science. 1996 Aug 16;273(5277):948–950. doi: 10.1126/science.273.5277.948. [DOI] [PubMed] [Google Scholar]
  4. Creusot F., Fouilloux E., Dron M., Lafleuriel J., Picard G., Billault A., Le Paslier D., Cohen D., Chabouté M. E., Durr A. The CIC library: a large insert YAC library for genome mapping in Arabidopsis thaliana. Plant J. 1995 Nov;8(5):763–770. doi: 10.1046/j.1365-313x.1995.08050763.x. [DOI] [PubMed] [Google Scholar]
  5. Devereux J., Haeberli P., Smithies O. A comprehensive set of sequence analysis programs for the VAX. Nucleic Acids Res. 1984 Jan 11;12(1 Pt 1):387–395. doi: 10.1093/nar/12.1part1.387. [DOI] [PMC free article] [PubMed] [Google Scholar]
  6. Diorio C., Cai J., Marmor J., Shinder R., DuBow M. S. An Escherichia coli chromosomal ars operon homolog is functional in arsenic detoxification and is conserved in gram-negative bacteria. J Bacteriol. 1995 Apr;177(8):2050–2056. doi: 10.1128/jb.177.8.2050-2056.1995. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Estelle M. Plant tropisms: the ins and outs of auxin. Curr Biol. 1996 Dec 1;6(12):1589–1591. doi: 10.1016/s0960-9822(02)70780-x. [DOI] [PubMed] [Google Scholar]
  8. Evans M. L. Gravitropism: interaction of sensitivity modulation and effector redistribution. Plant Physiol. 1991;95:1–5. doi: 10.1104/pp.95.1.1. [DOI] [PMC free article] [PubMed] [Google Scholar]
  9. Garbers C., DeLong A., Deruére J., Bernasconi P., Söll D. A mutation in protein phosphatase 2A regulatory subunit A affects auxin transport in Arabidopsis. EMBO J. 1996 May 1;15(9):2115–2124. [PMC free article] [PubMed] [Google Scholar]
  10. Harrison M. A., Pickard B. G. Auxin asymmetry during gravitropism by tomato hypocotyls. Plant Physiol. 1989;89:652–657. doi: 10.1104/pp.89.2.652. [DOI] [PMC free article] [PubMed] [Google Scholar]
  11. Hobbie L., Estelle M. The axr4 auxin-resistant mutants of Arabidopsis thaliana define a gene important for root gravitropism and lateral root initiation. Plant J. 1995 Feb;7(2):211–220. doi: 10.1046/j.1365-313x.1995.7020211.x. [DOI] [PubMed] [Google Scholar]
  12. Hoenke S., Schmid M., Dimroth P. Sequence of a gene cluster from Klebsiella pneumoniae encoding malonate decarboxylase and expression of the enzyme in Escherichia coli. Eur J Biochem. 1997 Jun 1;246(2):530–538. doi: 10.1111/j.1432-1033.1997.00530.x. [DOI] [PubMed] [Google Scholar]
  13. Kim Y., Zhang H., Scholl R. L. Two evolutionarily divergent genes encode a cytoplasmic ribosomal protein of Arabidopsis thaliana. Gene. 1990 Sep 14;93(2):177–182. doi: 10.1016/0378-1119(90)90222-d. [DOI] [PubMed] [Google Scholar]
  14. Kozak M. An analysis of vertebrate mRNA sequences: intimations of translational control. J Cell Biol. 1991 Nov;115(4):887–903. doi: 10.1083/jcb.115.4.887. [DOI] [PMC free article] [PubMed] [Google Scholar]
  15. Kyte J., Doolittle R. F. A simple method for displaying the hydropathic character of a protein. J Mol Biol. 1982 May 5;157(1):105–132. doi: 10.1016/0022-2836(82)90515-0. [DOI] [PubMed] [Google Scholar]
  16. Ludevid D., Höfte H., Himelblau E., Chrispeels M. J. The Expression Pattern of the Tonoplast Intrinsic Protein gamma-TIP in Arabidopsis thaliana Is Correlated with Cell Enlargement. Plant Physiol. 1992 Dec;100(4):1633–1639. doi: 10.1104/pp.100.4.1633. [DOI] [PMC free article] [PubMed] [Google Scholar]
  17. Maher E. P., Martindale S. J. Mutants of Arabidopsis thaliana with altered responses to auxins and gravity. Biochem Genet. 1980 Dec;18(11-12):1041–1053. doi: 10.1007/BF00484337. [DOI] [PubMed] [Google Scholar]
  18. Marger M. D., Saier M. H., Jr A major superfamily of transmembrane facilitators that catalyse uniport, symport and antiport. Trends Biochem Sci. 1993 Jan;18(1):13–20. doi: 10.1016/0968-0004(93)90081-w. [DOI] [PubMed] [Google Scholar]
  19. Moore D. Perception and response to gravity in higher fungi--a critical appraisal. New Phytol. 1991;117:3–23. doi: 10.1111/j.1469-8137.1991.tb00940.x. [DOI] [PubMed] [Google Scholar]
  20. Moore R., Evans M. L. How roots perceive and respond to gravity. Am J Bot. 1986 Apr;73(4):574–587. [PubMed] [Google Scholar]
  21. Muday G. K., Haworth P. Tomato root growth, gravitropism, and lateral development: correlation with auxin transport. Plant Physiol Biochem. 1994 Mar-Apr;32(2):193–203. [PubMed] [Google Scholar]
  22. Nakai K., Kanehisa M. A knowledge base for predicting protein localization sites in eukaryotic cells. Genomics. 1992 Dec;14(4):897–911. doi: 10.1016/S0888-7543(05)80111-9. [DOI] [PMC free article] [PubMed] [Google Scholar]
  23. Okada K., Shimura Y. Reversible root tip rotation in Arabidopsis seedlings induced by obstacle-touching stimulus. Science. 1990 Oct 12;250(4978):274–276. doi: 10.1126/science.250.4978.274. [DOI] [PubMed] [Google Scholar]
  24. Okada K., Ueda J., Komaki M. K., Bell C. J., Shimura Y. Requirement of the Auxin Polar Transport System in Early Stages of Arabidopsis Floral Bud Formation. Plant Cell. 1991 Jul;3(7):677–684. doi: 10.1105/tpc.3.7.677. [DOI] [PMC free article] [PubMed] [Google Scholar]
  25. Pearson W. R. Rapid and sensitive sequence comparison with FASTP and FASTA. Methods Enzymol. 1990;183:63–98. doi: 10.1016/0076-6879(90)83007-v. [DOI] [PubMed] [Google Scholar]
  26. Pickard B. G. Early events in geotropism of seedling shoots. Annu Rev Plant Physiol. 1985;36:55–75. doi: 10.1146/annurev.pp.36.060185.000415. [DOI] [PubMed] [Google Scholar]
  27. Rost B. PHD: predicting one-dimensional protein structure by profile-based neural networks. Methods Enzymol. 1996;266:525–539. doi: 10.1016/s0076-6879(96)66033-9. [DOI] [PubMed] [Google Scholar]
  28. Ruegger M., Dewey E., Hobbie L., Brown D., Bernasconi P., Turner J., Muday G., Estelle M. Reduced naphthylphthalamic acid binding in the tir3 mutant of Arabidopsis is associated with a reduction in polar auxin transport and diverse morphological defects. Plant Cell. 1997 May;9(5):745–757. doi: 10.1105/tpc.9.5.745. [DOI] [PMC free article] [PubMed] [Google Scholar]
  29. Simmons C., Migliaccio F., Masson P., Caspar T., Soll D. A novel root gravitropism mutant of Arabidopsis thaliana exhibiting altered auxin physiology. Physiol Plant. 1995;93:790–798. [PubMed] [Google Scholar]
  30. Singer S. J. The structure and insertion of integral proteins in membranes. Annu Rev Cell Biol. 1990;6:247–296. doi: 10.1146/annurev.cb.06.110190.001335. [DOI] [PubMed] [Google Scholar]
  31. Studier F. W., Rosenberg A. H., Dunn J. J., Dubendorff J. W. Use of T7 RNA polymerase to direct expression of cloned genes. Methods Enzymol. 1990;185:60–89. doi: 10.1016/0076-6879(90)85008-c. [DOI] [PubMed] [Google Scholar]
  32. Teichmann T., Guan C., Kristoffersen P., Muster G., Tietz O., Palme K. Cloning and biochemical characterization of an anionic peroxidase from Zea mays. Eur J Biochem. 1997 Aug 1;247(3):826–832. doi: 10.1111/j.1432-1033.1997.00826.x. [DOI] [PubMed] [Google Scholar]
  33. Wisman E., Cardon G. H., Fransz P., Saedler H. The behaviour of the autonomous maize transposable element En/Spm in Arabidopsis thaliana allows efficient mutagenesis. Plant Mol Biol. 1998 Aug;37(6):989–999. doi: 10.1023/a:1006082009151. [DOI] [PubMed] [Google Scholar]
  34. Yamauchi Y., Fukaki H., Fujisawa H., Tasaka M. Mutations in the SGR4, SGR5 and SGR6 loci of Arabidopsis thaliana alter the shoot gravitropism. Plant Cell Physiol. 1997 May;38(5):530–535. doi: 10.1093/oxfordjournals.pcp.a029201. [DOI] [PubMed] [Google Scholar]
  35. Young L. M., Evans M. L., Hertel R. Correlations between gravitropic curvature and auxin movement across gravistimulated roots of Zea mays. Plant Physiol. 1990;92:792–796. doi: 10.1104/pp.92.3.792. [DOI] [PMC free article] [PubMed] [Google Scholar]
  36. Zettl R., Schell J., Palme K. Photoaffinity labeling of Arabidopsis thaliana plasma membrane vesicles by 5-azido-[7-3H]indole-3-acetic acid: identification of a glutathione S-transferase. Proc Natl Acad Sci U S A. 1994 Jan 18;91(2):689–693. doi: 10.1073/pnas.91.2.689. [DOI] [PMC free article] [PubMed] [Google Scholar]

Articles from The EMBO Journal are provided here courtesy of Nature Publishing Group

RESOURCES