Table 2. Sequences of mitochondrial COI, 16S and nuclear 28S genes of Pinnidae species used in the genetic analysis.
The 20 new sequences from Cabo Verde were the only ones obtained in this study and the GenBank accession numbers are presented here for each marker. The total number of specimens per species is given as well as the location where it was found and the GenBank accession numbers for each. Streptopinna saccata species was included in the species tree reconstruction as outgroup.
| Taxon | Location 1 | Location 2 | Region | N | ID | Specimens | 16S rRNA | COI | 28S rRNA |
|---|---|---|---|---|---|---|---|---|---|
| Pinna rudis Linnaeus, 1774 | Cabo Verde–Santo Antão | Porto Novo | Atlantic Ocean | 6 | VA1 | PRUD (VA1, 1–6) | OQ055700–OQ055705 |
OQ026776
OQ026781 |
OQ026797
OQ026802 |
| Cabo Verde–São Vicente | Laginha | 6 | VV1 | PRUD (VV1, 1–6) | OQ05576–OQ055711 | OQ026782–OQ026787 | OQ026803–OQ026808 | ||
| Baía das Gatas | 5 | VV2 | PRUD (VV2, 1–5) | OQ055712–OQ055716 | OQ026788–OQ026792 | OQ026809–OQ026813 | |||
| Cabo Verde–Santa Luzia | Portinho | 3 | VL1 | PRUD (VL1, 1–3) | OQ055717–OQ055719 | OQ026793–OQ026795 | OQ026814–OQ026816 | ||
| Spain | Murcia | Mediterranean Sea | 1 1 |
Pr | Pr13 | – | KJ366482 | KJ366289 | |
| Pr | Pr15 | KJ365726 | KJ366483 | KJ366291 | |||||
| Columbrete island | Mediterranean Sea | 1 | Pr | Pr44 | KJ365731 | – | KJ366298 | ||
| Canarias island | El Hierro | Atlantic Ocean | 1 | Pr | Pr24 | KJ365727 | KJ366484 | KJ366292 | |
| 1 | Pr | Pr25 | KJ365728 | KJ366485 | KJ366293 | ||||
| 1 | Pr | Pr28 | KJ365729 | KJ366486 | KJ366294 | ||||
| 1 | Pr | Pr29 | – | KJ366487 | KJ366295 | ||||
| Tenerife | Atlantic Ocean | 1 | Pr | Pr40 | KJ365730 | – | KJ366296 | ||
| 1 | Pr | Pr42 | – | KJ366488 | KJ366297 | ||||
| 1 | Pr | Pr57 | KJ365733 | KJ366489 | KJ366301 | ||||
| 1 | Pr | Pr58 | KJ365734 | KJ366490 | KJ366302 | ||||
| 1 | Pr | Pr59 | – | – | KJ366303 | ||||
| Fuerteventura | Atlantic Ocean | 1 | Pr | Pr56 | KJ365732 | – | KJ366300 | ||
| Azores | São Miguel | Atlantic Ocean | 1 | AZ1 | MZ USP 114025 | KJ365520 | KJ366319 | KJ366026 | |
| 1 | AZ2 | MZ USP 114038-1 | KJ365521 | KJ366320 | KJ366027 | ||||
| 1 | AZ3 | MZ USP 114038-2 | KJ365522 | KJ366321 | KJ366028 | ||||
| Senegal | Gorée island | Atlantic Ocean | 1 | SN1 | MNHN IM-2013-7009 | KJ365642 | – | KJ366172 | |
| 1 | SN2 | MNHN IM-2013-7010 | – | – | KJ366181 | ||||
| Pinna carnea Gmelin, 1791 | Panama | Bocas del Toro | Atlantic Ocean | 1 | PA1 | MCZ MAL-381150 | KJ365533 | KJ366336 | KJ366044 |
| Florida | Long Key Channe | Atlantic Ocean | 1 | FL1 | UF 437518 | KJ365608 | KJ366396 | KJ366126 | |
| French Antilles | Guadeloupe | Atlantic Ocean | 1 | FA1 | MNHN IM-2013-7108 | KJ365634 | KJ366408 | KJ366157 | |
| Pinna atropurpurea Sowerby I, 1825 | Japan | Okinawa | Pacific Ocean | 1 | JA1 | UF 351968C | KJ365595 | – | KJ366112 |
| Philippines | Mactan island | Pacific Ocean | 1 | PH1 | FLMNH_MO_349489 | KJ365632 | – | KJ366154 | |
| 1 | PH2 | MCZ MAL-381081 | KJ365564 | KU987199 | KJ366080 | ||||
| Pinna bicolor Gmelin, 1791 | Oman | Bar Al Hikman Peninsula | Red Sea | 1 | OM1 | UF_367994 | KJ365599 | – | KJ366116 |
| Mozambique | Inhaca island | Indian Ocean | 1 | MO1 | MNHN IM-2013-7077 | KJ365682 | – | KJ366225 | |
| Indian Ocean | 1 | MO2 | MNHN IM-2013-7078 | KJ365691 | – | KJ366234 | |||
| China | southern China coast | Pacific Ocean | 1 | PB | PB1 | JN182725 | |||
| Pinna dolabrata Lamarck, 1819 | Australia | Woody island | Pacific Ocean | 1 | AU1 | MNHN IM-2013-7088 | KJ365700 | – | KJ366246 |
| 1 | AU2 | MNHN IM-2013-7087 | KJ366236 | ||||||
| Heron island | Pacific Ocean | 1 | AU3 | UF 437384 | KJ365590 | – | KJ366107 | ||
| Pinna muricata Linnaeus, 1758 | Madagascar | Nosy be | Indian Ocean | 1 | MA1 | UF 423478_a | KJ365579 | KJ366375 | KJ366095 |
| Djibouti | Red Sea | 1 | DJ1 | UF 455816 | KJ365585 | KJ366381 | KJ366102 | ||
| Guam | Pago bay | Pacific Ocean | 1 | GU1 | MO_ 298856 | KJ365627 | KJ366402 | KJ366148 | |
| Pinna nobilis Linnaeus, 1758 | Spain | Columbretes | Mediterranean Sea | 1 | Pn | Pn8 | KJ365725 | – | KJ366286 |
| Palma de Mallorca | Mediterranean Sea | 1 | Pn | Pn68 | KJ365721 | – | KJ366281 | ||
| 1 | ML4 | mallorca4 | – | KY321774 | – | ||||
| Múrcia | Mediterranean Sea | 1 | ML16 | murcia16 | – | KY321811 | – | ||
| Pinna trigonalis W. H. Pease, 1861 | French Polynesia | Marquesas islands | Pacific Ocean | 1 | FP1 | MNHN IM-2013-7035 | KJ365661 | KJ366434 | KJ366198 |
| 1 | FP2 | MNHN IM-2013-7038 | KJ365687 | KJ366457 | KJ366230 | ||||
| 1 | FP3 | MNHN IM-2013-7045 | KJ365679 | KJ366451 | KJ366221 | ||||
|
Pinna (Abyssopinna) epica Jousseaume, 1894 |
Papua New Guinea | Pacific Ocean | 1 | PG1 | MNHN IM-2013-7084 | KJ365667 | KJ366440 | KJ366205 | |
| New Caledonia | South of Grande Terre | 1 | nC1 | MNHN IM-2013-7116 | KJ365639 | KJ366414 | KJ366165 | ||
| New Caledonia | North of Grande Terre | 1 | nC2 | MNHN IM-2013-7023 | KJ365694 | KJ366462 | KJ366239 | ||
| Streptopinna saccata (Linnaeus, 1758) | Hawaii | French Frigate Shoals | Pacific Ocean | 1 | Ssaca1 | UF 413844 | KJ365601 | KJ366391 | KJ366119 |
| French Polynesia | Tahiti | 1 | Ssaca2 | MCZ MAL-381010 | KJ365742 | KJ366495 | KJ366314 |