Abstract
Two lysine residues of bovine serum albumin reacted with 1-fluoro-2,4-dinitrobenzene with apparent second-order rate constants approx. 500-times greater than those observed in similar reactions with low-molecular-weight lysine derivatives. A series of dinitrophenyl (Dnp)-bovine serum albumins were prepared and their ability to bind univalent fragments of anti-Dnp antibody was measured by fluorescence-quenching titrations. Compared with the Dnp group of the free hapten, 6-N-Dnp-aminohexanoate, the majority of the protein-bound Dnp groups were unavailable to the antibody at pH8.0. When the same Dnp-albumins were titrated at pH3.0 the availability of the Dnp groups increased approx. 3-fold. Dnp-albumins were treated with pepsin at pH3.0 and Dnp-containing fragments isolated by chromatography on DE-52 DEAE-cellulose. Fluorescence-quenching titrations showed that the Dnp groups on the fragments behaved like the free hapten with respect to quenching efficiency, although with an increased dissociation constant. The association between the Dnp-albumins and the antibody was measured also by difference-spectral titrations at high protein concentrations. Antibody binding was increased under these conditions, but the Dnp group of mono-Dnp-albumin remained unavailable to antibody. We propose that the reactive lysine residues are located in clefts between the globular sub-domains of the single polypeptide chain. Dnp groups attached to these lysine residues are fully exposed to the solvent, but binding of the macromolecular probe, anti-Dnp antibody, is sterically hindered by the adjacent surface of the albumin molecule.
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Selected References
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- Allewell N. M., Mitsui Y., Wyckoff H. W. X-ray diffraction studies of epsilon-41-dinitropheny-ribonuclease-S. J Biol Chem. 1973 Aug 10;248(15):5291–5298. [PubMed] [Google Scholar]
- BALDWIN R. L. Boundary spreading in sedimentation-velocity experiments. V. Measurement of the diffusion coefficient of bovine albumin by Fujita's equation. Biochem J. 1957 Mar;65(3):503–512. doi: 10.1042/bj0650503. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Braam W. G., Hilak M. C., Harmsen B. J., van Os G. A. Short digestion of bovine serum albumin with pepsin. Isolation and characterization of fragments and their location in the albumin molecule. Int J Pept Protein Res. 1974;6(1):21–29. doi: 10.1111/j.1399-3011.1974.tb02354.x. [DOI] [PubMed] [Google Scholar]
- Chen R. F. Removal of fatty acids from serum albumin by charcoal treatment. J Biol Chem. 1967 Jan 25;242(2):173–181. [PubMed] [Google Scholar]
- EISEN H. N. PREPARATION OF PURIFIED ANTI-2,4-DINITROPHENYL ANTIBODIES. Methods Med Res. 1964;10:94–102. [PubMed] [Google Scholar]
- EISEN H. N., SISKIND G. W. VARIATIONS IN AFFINITIES OF ANTIBODIES DURING THE IMMUNE RESPONSE. Biochemistry. 1964 Jul;3:996–1008. doi: 10.1021/bi00895a027. [DOI] [PubMed] [Google Scholar]
- ELLMAN G. L. Tissue sulfhydryl groups. Arch Biochem Biophys. 1959 May;82(1):70–77. doi: 10.1016/0003-9861(59)90090-6. [DOI] [PubMed] [Google Scholar]
- Ettinger M. J., Hirs C. H. On the structure of 41-Dinitrophenyl ribonuclease A. Solvent perturbation, thermal transition, optical rotatory dispersion, and binding studies. Biochemistry. 1968 Oct;7(10):3374–3380. doi: 10.1021/bi00850a010. [DOI] [PubMed] [Google Scholar]
- Feldhoff R. C., Peters T., Jr Fragments of bovine serum albumin produced by limited proteolysis. Isolation and characterization of peptic fragments. Biochemistry. 1975 Oct 7;14(20):4508–4514. doi: 10.1021/bi00691a027. [DOI] [PubMed] [Google Scholar]
- Fletcher J. E., Spector A. A., Ashbrook J. D. Analysis of macromolecule--ligand binding by determination of stepwise equilibrium constants. Biochemistry. 1970 Nov 10;9(23):4580–4587. doi: 10.1021/bi00825a018. [DOI] [PubMed] [Google Scholar]
- Freedman R. B., Radda G. K. The reaction of 2,4,6-trinitrobenzenesulphonic acid with amino acids, Peptides and proteins. Biochem J. 1968 Jul;108(3):383–391. doi: 10.1042/bj1080383. [DOI] [PMC free article] [PubMed] [Google Scholar]
- GREEN N. M. THE APPARENT HIGH REACTIVITY OF SOME AMINO GROUPS OF BOVINE SERUM ALBUMIN. Biochim Biophys Acta. 1963 Aug 13;74:542–543. doi: 10.1016/0006-3002(63)91397-0. [DOI] [PubMed] [Google Scholar]
- GREEN N. M., WORK E. Pancreatic trypsin inhibitor. II. Reaction with trypsin. Biochem J. 1953 May;54(2):347–352. doi: 10.1042/bj0540347. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Geisow M. J., Beaven G. H. Large fragments of human serum albumin. Biochem J. 1977 Mar 1;161(3):619–625. doi: 10.1042/bj1610619. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Gerig J. T., Reinheimer J. D. Modification of human serum albumin with trifluoromethyl-substituted aryl halides and sulfonates. J Am Chem Soc. 1975 Jan 8;97(1):168–173. doi: 10.1021/ja00834a029. [DOI] [PubMed] [Google Scholar]
- Ghazarian J. G. Reactions of 1-fluoro-2,4-dinitrobenzene. I. Kinetic determination of the pK values of amino acids and peptides. Arch Biochem Biophys. 1972 May;150(1):72–76. doi: 10.1016/0003-9861(72)90011-2. [DOI] [PubMed] [Google Scholar]
- Goldfarb A. R. Heterogeneity of amino groups in proteins. I. Human serum albumin. Biochemistry. 1966 Aug;5(8):2574–2578. doi: 10.1021/bi00872a014. [DOI] [PubMed] [Google Scholar]
- Green N. M. Electron microscopy of the immunoglobulins. Adv Immunol. 1969;11:1–30. doi: 10.1016/s0065-2776(08)60476-9. [DOI] [PubMed] [Google Scholar]
- HARRINGTON W. F., JOHNSON P., OTTEWILL R. H. Bovine serum albumin and its behaviour in acid solution. Biochem J. 1956 Apr;62(4):569–582. doi: 10.1042/bj0620569. [DOI] [PMC free article] [PubMed] [Google Scholar]
- HERSKOVITS T. T., LASKOWSKI M., Jr Location of chromophoric residues in proteins by solvent perturbation. I. Tyrosyls in serum albumins. J Biol Chem. 1962 Aug;237:2481–2492. [PubMed] [Google Scholar]
- King T. P. Limited pepsin digestion of bovine plasma albumin. Arch Biochem Biophys. 1973 Jun;156(2):509–520. doi: 10.1016/0003-9861(73)90300-7. [DOI] [PubMed] [Google Scholar]
- Knight C. G., Green N. M. The accessibility of protein-bound dinitrophenyl groups to univalent fragments of anti-dinitrophenyl antibody. Biochem J. 1976 Nov;159(2):323–333. doi: 10.1042/bj1590323. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Little J. R., Eisen H. N. Evidence for tryptophan in the active sites of antibodies to polynitrobenzenes. Biochemistry. 1967 Oct;6(10):3119–3125. doi: 10.1021/bi00862a020. [DOI] [PubMed] [Google Scholar]
- Richards F. M. Areas, volumes, packing and protein structure. Annu Rev Biophys Bioeng. 1977;6:151–176. doi: 10.1146/annurev.bb.06.060177.001055. [DOI] [PubMed] [Google Scholar]
- SANGER F. The terminal peptides of insulin. Biochem J. 1949;45(5):563–574. doi: 10.1042/bj0450563. [DOI] [PMC free article] [PubMed] [Google Scholar]
- STARK G. R., SMYTH D. G. The use of cyanate for the determination of NH2-terminal residues in proteins. J Biol Chem. 1963 Jan;238:214–226. [PubMed] [Google Scholar]
- Schmidt D. E., Jr, Westheimer F. H. PK of the lysine amino group at the active site of acetoacetate decarboxylase. Biochemistry. 1971 Mar 30;10(7):1249–1253. doi: 10.1021/bi00783a023. [DOI] [PubMed] [Google Scholar]
- Shivaram K. N., Wallenfels K. Reaction of amino acids, peptides and related compounds with electrophilic reagents. Indian J Biochem. 1969 Jun;6(2):77–81. [PubMed] [Google Scholar]
- TOMBS M. P., SOUTER F., MACLAGAN N. F. The spectrophotometric determination of protein at 210 millimicrons. Biochem J. 1959 Sep;73:167–171. doi: 10.1042/bj0730167. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Taylor R. P., Berga S., Chau V., Bryner C. Bovine serum albumin as catalyst. III. Conformational studies. J Am Chem Soc. 1975 Apr 2;97(7):1943–1948. doi: 10.1021/ja00840a056. [DOI] [PubMed] [Google Scholar]
- Taylor R. P. Letter: Bovine serum albumin as a catalyst. 4. Identification of the active site. J Am Chem Soc. 1976 Apr 28;98(9):2684–2686. doi: 10.1021/ja00425a058. [DOI] [PubMed] [Google Scholar]
- Velick S. F., Parker C. W., Eisen H. N. EXCITATION ENERGY TRANSFER AND THE QUANTITATIVE STUDY OF THE ANTIBODY HAPTEN REACTION. Proc Natl Acad Sci U S A. 1960 Nov;46(11):1470–1482. doi: 10.1073/pnas.46.11.1470. [DOI] [PMC free article] [PubMed] [Google Scholar]
- WEBER G., YOUNG L. B. FRAGMENTATION OF BOVINE SERUM ALBUMIN BY PEPSIN. II. ISOLATION, AMINO ACID COMPOSITION, AND PHYSICAL PROPERTIES OF THE FRAGMENTS. J Biol Chem. 1964 May;239:1424–1431. [PubMed] [Google Scholar]