Abstract
Chlamydomonas is a popular genetic model system for studying many cellular processes. In this report, we describe a new approach to isolate Chlamydomonas genes using the cloned nitrate reductase gene (NIT1) as an insertional mutagen. A linearized plasmid containing the NIT1 gene was introduced into nit1 mutant cells by glass-bead transformation. Of 3000 Nit(+) transformants examined, 74 showed motility defects of a wide range of phenotypes, suggesting that DNA transformation is an effective method for mutagenizing cells. For 13 of 15 such motility mutants backcrossed to nit(-) mutant strains, the motility phenotype cosegregated with the Nit(+) phenotype, indicating that the motility defects of these 13 mutants may be caused by integration of the plasmid. Further genetic analysis indicated that three of these mutants contained alleles of previously identified loci: mbo2 (move backward only), pf13 (paralyzed flagella) and vfl1 (variable flagellar number). Three other abnormal-flagellar-number mutants did not map to any previously described loci at which mutations produce similar phenotypes. Genomic sequences flanking the integrated plasmid in the mbo2 and vfl1 mutants were isolated and used as probes to obtain wild-type genomic clones, which complemented the motility defects upon transformation into cells. Our results demonstrate the potential of this new approach for cloning genes identified by mutation in Chlamydomonas.
Full Text
The Full Text of this article is available as a PDF (9.4 MB).
Selected References
These references are in PubMed. This may not be the complete list of references from this article.
- Adams G. M., Wright R. L., Jarvik J. W. Defective temporal and spatial control of flagellar assembly in a mutant of Chlamydomonas reinhardtii with variable flagellar number. J Cell Biol. 1985 Mar;100(3):955–964. doi: 10.1083/jcb.100.3.955. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Diallinas G., Scazzocchio C. A gene coding for the uric acid-xanthine permease of Aspergillus nidulans: inactivational cloning, characterization, and sequence of a cis-acting mutation. Genetics. 1989 Jun;122(2):341–350. doi: 10.1093/genetics/122.2.341. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Diener D. R., Curry A. M., Johnson K. A., Williams B. D., Lefebvre P. A., Kindle K. L., Rosenbaum J. L. Rescue of a paralyzed-flagella mutant of Chlamydomonas by transformation. Proc Natl Acad Sci U S A. 1990 Aug;87(15):5739–5743. doi: 10.1073/pnas.87.15.5739. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Dutcher S. K., Lux F. G., 3rd Genetic interactions of mutations affecting flagella and basal bodies in Chlamydomonas. Cell Motil Cytoskeleton. 1989;14(1):104–117. doi: 10.1002/cm.970140120. [DOI] [PubMed] [Google Scholar]
- Feinberg A. P., Vogelstein B. A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Anal Biochem. 1983 Jul 1;132(1):6–13. doi: 10.1016/0003-2697(83)90418-9. [DOI] [PubMed] [Google Scholar]
- Feldmann K. A., Marks M. D., Christianson M. L., Quatrano R. S. A Dwarf Mutant of Arabidopsis Generated by T-DNA Insertion Mutagenesis. Science. 1989 Mar 10;243(4896):1351–1354. doi: 10.1126/science.243.4896.1351. [DOI] [PubMed] [Google Scholar]
- Huang B., Ramanis Z., Dutcher S. K., Luck D. J. Uniflagellar mutants of Chlamydomonas: evidence for the role of basal bodies in transmission of positional information. Cell. 1982 Jul;29(3):745–753. doi: 10.1016/0092-8674(82)90436-6. [DOI] [PubMed] [Google Scholar]
- James S. W., Ranum L. P., Silflow C. D., Lefebvre P. A. Mutants resistant to anti-microtubule herbicides map to a locus on the uni linkage group in Chlamydomonas reinhardtii. Genetics. 1988 Jan;118(1):141–147. doi: 10.1093/genetics/118.1.141. [DOI] [PMC free article] [PubMed] [Google Scholar]
- KATES J. R., JONES R. F. THE CONTROL OF GAMETIC DIFFERENTIATION IN LIQUID CULTURES OF CHLAMYDOMONAS. J Cell Physiol. 1964 Apr;63:157–164. doi: 10.1002/jcp.1030630204. [DOI] [PubMed] [Google Scholar]
- Kang S., Metzenberg R. L. Insertional mutagenesis in Neurospora crassa: cloning and molecular analysis of the preg+ gene controlling the activity of the transcriptional activator NUC-1. Genetics. 1993 Feb;133(2):193–202. doi: 10.1093/genetics/133.2.193. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kindle K. L. High-frequency nuclear transformation of Chlamydomonas reinhardtii. Proc Natl Acad Sci U S A. 1990 Feb;87(3):1228–1232. doi: 10.1073/pnas.87.3.1228. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kuchka M. R., Jarvik J. W. Analysis of flagellar size control using a mutant of Chlamydomonas reinhardtii with a variable number of flagella. J Cell Biol. 1982 Jan;92(1):170–175. doi: 10.1083/jcb.92.1.170. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kuspa A., Loomis W. F. Tagging developmental genes in Dictyostelium by restriction enzyme-mediated integration of plasmid DNA. Proc Natl Acad Sci U S A. 1992 Sep 15;89(18):8803–8807. doi: 10.1073/pnas.89.18.8803. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Lux F. G., 3rd, Dutcher S. K. Genetic interactions at the FLA10 locus: suppressors and synthetic phenotypes that affect the cell cycle and flagellar function in Chlamydomonas reinhardtii. Genetics. 1991 Jul;128(3):549–561. doi: 10.1093/genetics/128.3.549. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Meisler M. H. Insertional mutation of 'classical' and novel genes in transgenic mice. Trends Genet. 1992 Oct;8(10):341–344. doi: 10.1016/0168-9525(92)90278-c. [DOI] [PubMed] [Google Scholar]
- Nakamura S. A backward swimming mutant of Chlamydomonas reinhardii. Exp Cell Res. 1979 Oct 15;123(2):441–444. doi: 10.1016/0014-4827(79)90496-8. [DOI] [PubMed] [Google Scholar]
- Piperno G., Huang B., Ramanis Z., Luck D. J. Radial spokes of Chlamydomonas flagella: polypeptide composition and phosphorylation of stalk components. J Cell Biol. 1981 Jan;88(1):73–79. doi: 10.1083/jcb.88.1.73. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ranum L. P., Thompson M. D., Schloss J. A., Lefebvre P. A., Silflow C. D. Mapping flagellar genes in Chlamydomonas using restriction fragment length polymorphisms. Genetics. 1988 Sep;120(1):109–122. doi: 10.1093/genetics/120.1.109. [DOI] [PMC free article] [PubMed] [Google Scholar]
- SAGER R., GRANICK S. Nutritional studies with Chlamydomonas reinhardi. Ann N Y Acad Sci. 1953 Oct 14;56(5):831–838. doi: 10.1111/j.1749-6632.1953.tb30261.x. [DOI] [PubMed] [Google Scholar]
- Schnell R. A., Lefebvre P. A. Isolation of the Chlamydomonas regulatory gene NIT2 by transposon tagging. Genetics. 1993 Jul;134(3):737–747. doi: 10.1093/genetics/134.3.737. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Segal R. A., Huang B., Ramanis Z., Luck D. J. Mutant strains of Chlamydomonas reinhardtii that move backwards only. J Cell Biol. 1984 Jun;98(6):2026–2034. doi: 10.1083/jcb.98.6.2026. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Singh G., Supp D. M., Schreiner C., McNeish J., Merker H. J., Copeland N. G., Jenkins N. A., Potter S. S., Scott W. legless insertional mutation: morphological, molecular, and genetic characterization. Genes Dev. 1991 Dec;5(12A):2245–2255. doi: 10.1101/gad.5.12a.2245. [DOI] [PubMed] [Google Scholar]
- Tam L. W., Kirk D. L. Identification of cell-type-specific genes of Volvox carteri and characterization of their expression during the asexual life cycle. Dev Biol. 1991 May;145(1):51–66. doi: 10.1016/0012-1606(91)90212-l. [DOI] [PubMed] [Google Scholar]
- Tilburn J., Roussel F., Scazzocchio C. Insertional inactivation and cloning of the wA gene of Aspergillus nidulans. Genetics. 1990 Sep;126(1):81–90. doi: 10.1093/genetics/126.1.81. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Weeks D. P., Beerman N., Griffith O. M. A small-scale five-hour procedure for isolating multiple samples of CsCl-purified DNA: application to isolations from mammalian, insect, higher plant, algal, yeast, and bacterial sources. Anal Biochem. 1986 Feb 1;152(2):376–385. doi: 10.1016/0003-2697(86)90423-9. [DOI] [PubMed] [Google Scholar]
- Woychik R. P., Maas R. L., Zeller R., Vogt T. F., Leder P. 'Formins': proteins deduced from the alternative transcripts of the limb deformity gene. Nature. 1990 Aug 30;346(6287):850–853. doi: 10.1038/346850a0. [DOI] [PubMed] [Google Scholar]
- Wright R. L., Chojnacki B., Jarvik J. W. Abnormal basal-body number, location, and orientation in a striated fiber-defective mutant of Chlamydomonas reinhardtii. J Cell Biol. 1983 Jun;96(6):1697–1707. doi: 10.1083/jcb.96.6.1697. [DOI] [PMC free article] [PubMed] [Google Scholar]