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. 1995 Apr;139(4):1469–1481. doi: 10.1093/genetics/139.4.1469

Involvement of the Host Initiator Function Dnaa in the Replication of Coliphage λ

G Wegrzyn 1, A Wegrzyn 1, I Konieczny 1, K Bielawski 1, G Konopa 1, M Obuchowski 1, D R Helinski 1, K Taylor 1
PMCID: PMC1206477  PMID: 7789753

Abstract

We demonstrate that the initiation of coliphage λ DNA replication is dependent on the host initiator function dnaA, provided that the lambdoid prophage Rac is absent. Presence of Rac compensated the absence of dnaA function, causing initiation of replication. In dnaAts rac(+) cells at 43°, most of parental phage DNA molecules, after one round of theta replication, switched to a replication with features of the sigma mode and produced progeny at high yield. Initiation of replication of the λPts1 mutant at 43° was blocked by dnaA function; however, under dnaA(-)rac(+) conditions all parental phage DNA molecules, after one round of theta replication, switched to the sigma mode and produced progeny at high yield. Taking into account our recent finding that transcriptional activation of oriλ seems to be dnaA-regulated (to be published elsewhere), we suggest that the DnaA-λPts1 incompatibility occurs at the insertion of the oriλ-bound λO-λP-DnaB preprimosome between the complementary λ DNA strands. The role of Rac and the mechanism of the switch from theta to sigma mode of λ phage DNA replication are discussed.

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Selected References

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  1. Alfano C., McMacken R. Ordered assembly of nucleoprotein structures at the bacteriophage lambda replication origin during the initiation of DNA replication. J Biol Chem. 1989 Jun 25;264(18):10699–10708. [PubMed] [Google Scholar]
  2. Alfano C., McMacken R. The role of template superhelicity in the initiation of bacteriophage lambda DNA replication. Nucleic Acids Res. 1988 Oct 25;16(20):9611–9630. doi: 10.1093/nar/16.20.9611. [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. Appleyard R K. Segregation of New Lysogenic Types during Growth of a Doubly Lysogenic Strain Derived from Escherichia Coli K12. Genetics. 1954 Jul;39(4):440–452. doi: 10.1093/genetics/39.4.440. [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. Bouché J. P., Gélugne J. P., Louarn J., Louarn J. M., Kaiser K. Relationships between the physical and genetic maps of a 470 x 10(3) base-pair region around the terminus of Escherichia coli K12 DNA replication. J Mol Biol. 1982 Jan 5;154(1):21–32. doi: 10.1016/0022-2836(82)90414-4. [DOI] [PubMed] [Google Scholar]
  5. Bouché J. P. Physical map of a 470 x 10(3) base-pair region flanking the terminus of DNA replication in the Escherichia coli K12 genome. J Mol Biol. 1982 Jan 5;154(1):1–20. doi: 10.1016/0022-2836(82)90413-2. [DOI] [PubMed] [Google Scholar]
  6. Boyer H. W., Roulland-Dussoix D. A complementation analysis of the restriction and modification of DNA in Escherichia coli. J Mol Biol. 1969 May 14;41(3):459–472. doi: 10.1016/0022-2836(69)90288-5. [DOI] [PubMed] [Google Scholar]
  7. Enquist L. W., Skalka A. Replication of bacteriophage lambda DNA dependent on the function of host and viral genes. I. Interaction of red, gam and rec. J Mol Biol. 1973 Apr 5;75(2):185–212. doi: 10.1016/0022-2836(73)90016-8. [DOI] [PubMed] [Google Scholar]
  8. Hansen F. G., von Meyenburg K. Characterization of the dnaA, gyrB and other genes in the dnaA region of the Escherichia coli chromosome on specialized transducing phages lambda tna. Mol Gen Genet. 1979 Sep;175(2):135–144. doi: 10.1007/BF00425529. [DOI] [PubMed] [Google Scholar]
  9. Kaiser K., Murray N. E. On the nature of sbcA mutations in E. coli K 12. Mol Gen Genet. 1980;179(3):555–563. doi: 10.1007/BF00271745. [DOI] [PubMed] [Google Scholar]
  10. Kaiser K., Murray N. E. Physical characterisation of the "Rac prophage" in E. coli K12. Mol Gen Genet. 1979 Sep;175(2):159–174. doi: 10.1007/BF00425532. [DOI] [PubMed] [Google Scholar]
  11. Kellenberger-Gujer G., Podhajska A. J., Caro L. A cold sensitive dnaA mutant of E. coli which overinitiates chromosome replication at low temperature. Mol Gen Genet. 1978 Jun 1;162(1):9–16. doi: 10.1007/BF00333845. [DOI] [PubMed] [Google Scholar]
  12. Klinkert J., Klein A. Roles of bacteriophage lambda gene products O and P during early and late phases of infection cycle. J Virol. 1978 Mar;25(3):730–737. doi: 10.1128/jvi.25.3.730-737.1978. [DOI] [PMC free article] [PubMed] [Google Scholar]
  13. Kur J., Gorska I., Taylor K. Escherichia coli dnaA initiation function is required for replication of plasmids derived from coliphage lambda. J Mol Biol. 1987 Nov 20;198(2):203–210. doi: 10.1016/0022-2836(87)90306-8. [DOI] [PubMed] [Google Scholar]
  14. Lichens-Park A., Smith C. L., Syvanen M. Integration of bacteriophage lambda into the cryptic lambdoid prophages of Escherichia coli. J Bacteriol. 1990 May;172(5):2201–2208. doi: 10.1128/jb.172.5.2201-2208.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
  15. Lipinska B., Fayet O., Baird L., Georgopoulos C. Identification, characterization, and mapping of the Escherichia coli htrA gene, whose product is essential for bacterial growth only at elevated temperatures. J Bacteriol. 1989 Mar;171(3):1574–1584. doi: 10.1128/jb.171.3.1574-1584.1989. [DOI] [PMC free article] [PubMed] [Google Scholar]
  16. Low K. B. Escherichia coli K-12 F-prime factors, old and new. Bacteriol Rev. 1972 Dec;36(4):587–607. doi: 10.1128/br.36.4.587-607.1972. [DOI] [PMC free article] [PubMed] [Google Scholar]
  17. Marsić N., Roje S., Stojiljković I., Salaj-Smic E., Trgovcević Z. In vivo studies on the interaction of RecBCD enzyme and lambda Gam protein. J Bacteriol. 1993 Aug;175(15):4738–4743. doi: 10.1128/jb.175.15.4738-4743.1993. [DOI] [PMC free article] [PubMed] [Google Scholar]
  18. McKinney M. D., Wechsler J. A. RNA polymerase interaction with dnaB protein and lambda P protein during lambda replication. J Virol. 1983 Nov;48(2):551–554. doi: 10.1128/jvi.48.2.551-554.1983. [DOI] [PMC free article] [PubMed] [Google Scholar]
  19. Mensa-Wilmot K., Carroll K., McMacken R. Transcriptional activation of bacteriophage lambda DNA replication in vitro: regulatory role of histone-like protein HU of Escherichia coli. EMBO J. 1989 Aug;8(8):2393–2402. doi: 10.1002/j.1460-2075.1989.tb08369.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  20. Mensa-Wilmot K., Seaby R., Alfano C., Wold M. C., Gomes B., McMacken R. Reconstitution of a nine-protein system that initiates bacteriophage lambda DNA replication. J Biol Chem. 1989 Feb 15;264(5):2853–2861. [PubMed] [Google Scholar]
  21. Patterson T. A., Dean M. Preparation of high titer lambda phage lysates. Nucleic Acids Res. 1987 Aug 11;15(15):6298–6298. doi: 10.1093/nar/15.15.6298. [DOI] [PMC free article] [PubMed] [Google Scholar]
  22. Pawłowicz A., Wegrzyn G., Taylor K. Effect of coliphage lambda P gene mutations on the stability of the lambda O protein, the initiator of lambda DNA replication. Acta Biochim Pol. 1993;40(1):29–31. [PubMed] [Google Scholar]
  23. Schnös M., Inman R. B. Position of branch points in replicating lambda DNA. J Mol Biol. 1970 Jul 14;51(1):61–73. doi: 10.1016/0022-2836(70)90270-6. [DOI] [PubMed] [Google Scholar]
  24. Signer E. R., Weil J. Recombination in bacteriophage lambda. I. Mutants deficient in general recombination. J Mol Biol. 1968 Jul 14;34(2):261–271. doi: 10.1016/0022-2836(68)90251-9. [DOI] [PubMed] [Google Scholar]
  25. Singer M., Baker T. A., Schnitzler G., Deischel S. M., Goel M., Dove W., Jaacks K. J., Grossman A. D., Erickson J. W., Gross C. A. A collection of strains containing genetically linked alternating antibiotic resistance elements for genetic mapping of Escherichia coli. Microbiol Rev. 1989 Mar;53(1):1–24. doi: 10.1128/mr.53.1.1-24.1989. [DOI] [PMC free article] [PubMed] [Google Scholar]
  26. Wegrzyn G., Taylor K. Inheritance of the replication complex by one of two daughter copies during lambda plasmid replication in Escherichia coli. J Mol Biol. 1992 Aug 5;226(3):681–688. doi: 10.1016/0022-2836(92)90625-t. [DOI] [PubMed] [Google Scholar]
  27. Zylicz M., Ang D., Liberek K., Georgopoulos C. Initiation of lambda DNA replication with purified host- and bacteriophage-encoded proteins: the role of the dnaK, dnaJ and grpE heat shock proteins. EMBO J. 1989 May;8(5):1601–1608. doi: 10.1002/j.1460-2075.1989.tb03544.x. [DOI] [PMC free article] [PubMed] [Google Scholar]

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