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Published in final edited form as: Pediatr Res. 2023 Oct 27;97(3):1040–1046. doi: 10.1038/s41390-023-02853-2

Heart Rate Patterns Predicting Cerebral Palsy in Preterm Infants

Lisa Letzkus 1,*, Robin Picavia 2, Genevieve Lyons 3, Jackson Brandberg 2, Jiaxing Qiu 2, Sherry Kausch 2, Doug Lake 4, Karen Fairchild 5
PMCID: PMC12100623  NIHMSID: NIHMS2054373  PMID: 37891365

Abstract

Background-

Heart rate (HR) patterns can inform on central nervous system dysfunction. We previously used highly comparative time series analysis (HCTSA) to identify HR patterns predicting mortality among patients in the Neonatal Intensive Care Unit (NICU) and now use this methodology to discover patterns predicting cerebral palsy (CP) in preterm infants.

Method-

We studied NICU patients <37 weeks’ gestation with archived every-2-second HR data throughout the NICU stay, and with or without later diagnosis of CP (n=57 CP and 1119 no CP). We performed HCTSA of >2000 HR metrics and identified 24 metrics analyzed on HR data from two seven-day periods: week1- and 37-weeks’ postmenstrual age (week1, week37). Multivariate modeling was used to optimize a parsimonious prediction model.

Results-

Week1 HR metrics with maximum AUC for CP prediction reflected low variability, including “RobustSD” (AUC 0.826; 0.772–0.870). At week37, high values of a novel HR metric “LongSD3”, the cubed value of the difference in HR values 100 seconds apart, added to week1 HR metrics for CP prediction. A combined birthweight + early and late HR model had AUC 0.853 (0.805, 0.892).

Conclusions-

Using HCTSA we discovered novel HR metrics and created a parsimonious model for CP prediction in preterm NICU patients.

Background and Significance

Cerebral palsy is eventually diagnosed in approximately 5% of preterm infants and can have significant consequences for quality of life.1,2 Historically diagnosis of CP was delayed until after one year of age but since publication in 2017 of early detection guidelines the age of CP diagnosis has decreased. This is important since early targeted therapies during periods of rapid brain development can improve long term functional outcomes.3 More work is needed to identify preterm infants in the Neonatal Intensive Care Unit (NICU) at high risk of CP to facilitate individualized therapies before and after discharge home.4

Atypical heart rate (HR) patterns in infants in the NICU can reflect central nervous system injury and dysfunction and predict a wide range of adverse outcomes.58 Our group has focused on discovery of simple HR metrics using time series analysis and we previously reported that low variability of HR, particularly in the first week after birth, is associated with severity of intracranial hemorrhage, hypoxic-ischemic brain injury, and long-term neurodevelopmental challenges. 9,10 More recently, we studied early HR patterns in NICU patients of all gestational ages with or without eventual diagnosis of CP, and found that simple HR metrics from the first week after birth, such as low standard deviation of every-2-second HR, added to clinical risk factors (lower maternal age, outborn delivery, lower 5-minute Apgar score) for CP prediction. 11 Since gestational age impacts both HR characteristics and risks for CP, in the current work we focus on preterm infants and tested both early (first week) and later (37 weeks postmenstrual age) HR patterns. We additionally sought to determine whether, using highly comparative time series analysis (HCTSA) methodology that we previously used to identify HR patterns predicting mortality, we could discover novel HR patterns providing evenbetter risk stratification for CP 1214

HCTSA was first described in 2013 by Fulcher and colleagues and involves analyzing time series data using hundreds of algorithms derived from multiple interdisciplinary fields.14 The algorithms are deployed using many sets of parameter values, resulting in thousands of operations. In medicine, HCTSA has been used primarily for analysis of electroencephalogram data.13 Our group has used the HCTSA approach to discover previously unknown patterns of HR predicting NICU mortality.12 The long-term objective of our group is to develop parsimonious models that may eventually be useful in the clinical setting, and the objective of the work presented here is to use HCTSA to discover new HR metrics early and later in the NICU stay for prediction of later diagnosis of CP. We note that in our current work, we do not use traditional analysis of heart rate variability which requires storage and analysis of electrocardiogram waveforms to measure inter-heartbeat intervals. Rather, we are using a simplified approach of analyzing the bedside monitor vital sign data files, with average HR displayed every- 2 seconds.

Methods

Design

This is a retrospective cohort study and was approved by the UVA Institutional Review Board with waiver of consent.

Patients

We considered for inclusion all patients born at <37 weeks’ gestation admitted to a level IV NICU at UVA Children’s Hospital from 2009–2019 with at least 4 hours of archived HR data within the first 7 days after birth and followed at our center beyond 3 years of age.

High risk infants cared for in the NICU at our center are followed after discharge by Neurodevelopmental and Behavioral Pediatrics through at least 2 years of age, and longer if developmental delays are identified. During this ten-year study period, the median age of CP diagnosis for the sample was 16 months (range 4 months - 105 months). The diagnosis of CP was confirmed by an experienced neurodevelopmental clinician (LL), by reviewing the records of every child with an ICD-9 or ICD-10 code associated with CP.

The no CP group included all infants <37 weeks’ gestational age admitted to the NICU 2009–2019, with at least 4 hours of HR data in the first week after birth and seen at our institution beyond age 3 with no ICD code indicating diagnosis of CP. We excluded a small number of late preterm infants with hypoxic ischemic encephalopathy treated with therapeutic hypothermia (1 CP case and 10 no CP) since HR is impacted by low core temperature.15 We also excluded a small number infants with later diagnosis of autism spectrum disorder (10 CP cases and 55 no CP) since in our recent work we discovered aberrant HR patterns during the NICU stay in those infants.16 As in our recent work, our comparison “no CP” group includes all eligible preterm NICU patients with data available and known to not have CP. Thus, we have a large comparison group which increases our ability to detect smaller differences between the two groups, increases precision by reducing sampling error, and improves generalizability with a large and diverse group of infants without CP.11

Clinical variables

Demographic and clinical characteristics and diagnoses during the NICU stay were obtained from the NICU database (NeoData, Isoprime, Chicago, IL) and electronic medical record (Epic).

Early clinical variables (known at birth) included maternal age, delivery mode (vaginal or C-section), outborn status, multiple gestation, gestational age, birth weight and head circumference, sex, race, and 5-minute Apgar score. Later clinical variables included intraventricular hemorrhage (IVH), post-hemorrhagic hydrocephalus requiring a ventriculoperitoneal shunt, seizures, administration of diazepam for hypertonicity, need for gastrostomy tube for feeding, and length of NICU stay. Variables that had at least 5 cases in either the no CP or CP groups were included in modeling.

Heart rate data collection and analysis

As part of standard of care at our institution, all NICU patients have bedside monitor vital sign data collected and stored for research with waiver of consent due to the observational, non-interventional nature of this work. For the current work, we used HR data displayed on bedside monitors every 2 seconds and archived using the BedMaster system (Hillrom).

HR data were initially analyzed in all 10 minute segments in two 7-day periods. Building on our prior work we analyzed 4 mathematical moments of HR data (mean, SD, skewness, kurtosis). Additionally, we applied nearly 2000 HCTSA operations on HR data from all 1176 infants included in the current study to identify those with the best ability to distinguish between CP and no CP infants in univariate analysis. To reduce the computational burden, we first focused on HR data from the first day after birth and identified 12 HCTSA metrics with the highest univariate AUC for CP prediction to move to the next phase of analysis on week-long HR data. We chose to focus on first day data since HR patterns soon after birth better reflect insults occurring in the peripartum period and since we used the full 24 hour period after birth the impact of interventions that might transiently impact the HR will be minimized. The 12 HCTSA metrics derived from this preliminary analysis are listed in Table 2, together with a brief description. And finally, also building on prior work, we analyzed 20 additional HCTSA algorithms called “medoids”. In our mortality prediction study, we used unsupervised clustering to identify 20 mutually exclusive subsets of HCTSA algorithms with relatively high correlation within a cluster and low correlation outside the cluster that explained the largest amount of variance (81%) found in the full HCTSA algorithm set. The center algorithms from each of 20 clusters are termed medoids and represent a point in the cluster from which the sum of distances to other data points in the cluster is minimal.

Table 2:

Heart rate HCTSA variables with highest CP prediction

Variable Name Short Description
diff_uudd up-up-down-down HR sequence
diff_zero no successive HR change
complexity_norm normalized by minimum possible value
long_SD_3 SD of HR values 100 seconds apart, cubed
poincare_diag points in bottom left top right of Poincare plot
diff_zero_length length of consecutive no HR change
local_range 25 local segments
random_local_SD bootstrap-based stationarity measure
symb3_eig_SD symbolic transform 3 level transition matrix
robust_SD moving threshold algorithm
symb3_diff_acb symbolic transform 3 level acb sequence
autocorr_ratio ratio of autocorrletion function with trimmed data

Legend: heart rate (HR); standard deviation (SD)

The code to compute the HR metrics are featured in Supplemental Table 1

For the current work we selected 24 HR metrics to move to the second phase of analysis on week-long data. These are shown in Supplemental Table1 and include 4 mathematical moments, 12 HCTSA top CP predictors, and 8 medoid top CP predictors from univariate first-day analysis. These 24 metrics were applied to HR data from two 7-day periods: the first week after birth (week 1) and at 37 weeks PMA (week 37). The early time period was expected to capture autonomic dysfunction associated with perinatal distress, inflammation, and hypoxia-ischemia, and the later time period at term corrected age to capture sustained nervous system dysfunction and cumulative brain insults that may occur during the NICU stay. For infants discharged from the NICU prior to 37 weeks PMA we analyzed HR in the 7 day period before discharge.

Every 10-minute HR segment was analyzed and the median value for each of the 24 features was identified for the two 7-day periods, week 1 and week 37.

Statistical analysis and modeling

Demographic and clinical characteristics including medical/neurological comorbidities and HR variables for infants with and without CP were compared to evaluate baseline differences using a T-test or nonparametric Mann-Whitney U test for continuous variables and Chi-square or Fisher’s exact test for categorical variables.

Early and late predictive models were developed for week 1 and week 37 time frames. We tested parsimonious models including no more than 5 variables (one predictor for every 10 CP cases in the sample), to avoid overfitting.

Optimal multivariable models were selected based on best fit as measured by the minimum Akaike’s Information Criteria (AIC). Fit is reported as McFaddens adjusted r-squared ([1],[2]) which transforms the AIC to a value between 0 and 1. A stepwise algorithm was used to find the initial best fit models of increasing size. Best fit models were identified that were locally optimal in that the fit was reduced if any of 3 modifications occurred: (1) any feature not in model was added; or (2) any feature in the model was removed; or (3) any feature in the model was replaced with a feature not in the model.

Ten-fold cross-validated AUC (cvAUC) was used as the primary performance measure. The 10 folds were fixed for all calculations and stratified to have equivalent numbers of CP cases. Variable importance was measured as the drop in cvAUC when the variable is removed from model. For models of size greater than 4, the final model was selected as largest model with all variables having importance of at least 0.005. The lift of the model was calculated as the positive predictive value (PPV) at a threshold equal to the event rate, divided by the event rate. At this lift value, the number of positives is equal to the number of CP cases (57) so the PPV is also equal to the sensitivity. We display predictive performance of individual variables and combined models in Figure 1 and Supplemental Figures 13 as fold increased risk of CP compared to overall risk of 1 for the entire cohort.

Figure 1: CP predictors in final model.

Figure 1:

A) HR and clinical variables were analyzed in 57 preterm NICU patients with eventual diagnosis of CP and 1119 without CP. The optimized model included one clinical variable (birth weight, grams BWT) and 3 HR metrics, one from week one HR data (Robust SD week 1) and 2 from week 37 HR data (LongSD3 and Symb3Diffacb week 37). For the 4 variables in the final model, relative risk for CP is shown on the y axis and the value of the variable on the x axis. The grey shading shows the 95% confidence intervals and the red lines indicate a significant difference (confidence interval not including one) in infants with and without CP. The black dotted lines indicate where 95% of the values lie. HR metrics are shown in units for each variable. B) Fold increased risk of CP based on percentile for each variable and for the final combined model.

Results

Cohort characteristics

In the years of the study (2009–2019), 3726 infants < 37 weeks’ GA were admitted to the UVA NICU. Of these, 1176 met inclusion criteria described in “methods”. A diagnosis of CP was made for 57 (4.8%), and 1119 patients without CP were identified as a comparison group.

Univariate analysis of clinical variables predicting CP

Demographics and clinical characteristics of the cohorts are displayed in Table 1. The groups differed significantly with respect to gestational age, birth weight and head circumference, outborn status and 5- minute Apgar score (all p-values < 0.05). White race characterized 75% of infants with CP and 67% of those without CP, a difference that was not statistically significant (p=0.195). Fifty-four percent of infants without CP were male compared to 49% in the CP group (p=0.496). IVH was associated with CP diagnosis, and all three patients that required a ventriculoperitoneal shunt for post-hemorrhagic hydrocephalus were diagnosed with CP. Length of NICU stay was longer for the CP group compared to the no CP group (median 88 days IQR 49–122 versus 25 days IQR 14–54, p<0.001).

Table 1:

Cohort characteristics

Demographic and Clinical Characteristics No CP=1119 CP=57 p-value
GA weeks mean (SD) 31.4 (3.5) 27.7 (3.2) <0.001
Birth weight kg, mean(SD) 1.7 (0.7) 1.1 (0.4) <0.001
Birth HC cm, mean (SD) 28.9 (3.7) 25.3 (3.1) <0.001
Multiple gestation n,% 307 (27.4) 13 (22.8) 0.542
Sex=Male n,% 610 (54.5) 28 (49.1) 0.496
Race/Ethnicity n,% 0.506
 Black 245 (21.9) 9 (15.8) 0.324
 Hispanic 53 (4.7) 3 (5.3) 0.729
 Other 73 (6.5) 3 (5.3) 0.576
 White 748 (66.8) 43 (75.4) 0.195
Maternal age mean years (SD) 28.2 (6.2) 28.3 (6.4) 0.862
Birth hospital=inborn n, % 1005 (89.8) 46 (80.7) 0.044
Delivery mode=vaginal n, % 439 (40.2) 16 (28.1) 0.072
5 minute Apgar median (min, max) 8 (0,10) 7 (0,10) <0.001
Intraventricular hemorrhage 116 (10.3) 17(29.3) <0.001
VP shunt n, % 0 (0.0) 3 (5.3) <0.001
Valium for hypertonicity n, % 16 (1.5) 6 (10.5) <0.001
Gastrostomy tube n, % 19 (1.7) 3 (5.3) 0.086
Length of stay, days (median, IQR) 25 (14–53.75) 88(48.5–121.75) <0.001

Legend: gestational age (GA); head circumference (HC); centimeter (cm); kilogram (kg); standard deviation (SD); ventriculoperitoneal shunt (VP shunt).

Univariate analysis of HR metrics predicting CP

In the first 24 hours after birth, 1061 infants (90%) had HR data and the median number of hours of data was 23 (IQR 16–24) for the initial HCTSA analysis. For the HCTSA analysis on HR data from the first seven days after birth, median hours of HR data available was 159 hours (IQR 116–167), and for the seven days at 37 weeks PMA median 155 hours (IQR 131–163). Thus, HR data availability was 95% and 98% of the 7-day periods, respectively.

Univariate risk of CP based on each of the 24 metrics described in methods were analyzed for week1 and week37 HR data. Of note, the 8 medoids identified by unsupervised clustering from our previously published HCTSA mortality prediction work 12 were outperformed for CP prediction in multivariate analyses described below by the 12 HCTSA operations identified by deploying the ~2000 HCTSA operations on the first day HR data. We therefore show univariate results only for the mathematical moments (Supplemental Figure S1) and the 12 HCTSA top performers for week1 HR and week37 HR (Supplemental Figures S2 and S3, respectively).

Multivariable modeling of early and late clinical and HR data for CP prediction

Performance of six multivariate models for CP prediction are shown in Table 3. The early clinical model included 3 variables known at birth (birthweight, race, and 5-minute Apgar score) and had cross-validated AUC (cvAUC) of 0.784 (0.721, 0.836), with birthweight being the most predictive variable. A discharge clinical model included NICU length of stay and had only slightly improved cvAUC of 0.791 (0.721, 0.839).

Table 3:

Performance of multivariate models to predict CP

Model Size cvAUC Lift Fit Features lower upper
Birth 3 0.784 4.343 0.125 BWT,Apgar5,Caucasian 0.721 0.836
Discharge Clinical 4 0.791 5.067 0.141 LOS,BWT,In Hospital,Caucasian 0.721 0.839
Week 1 HR 4 0.826 5.067 0.162 robust_SD_w1,complexity_norm_w1,random_local_SD_w1,long_SD_3_w1 0.772 0.870
Week 1 HR+Clinical 3 0.827 4.705 0.169 robust_SD_w1,long_SD_3_w1,BWT 0.773 0.868
Week 37 HR 4 0.846 6.153 0.204 robust_SD_w1,long_SD_3_w37,symb3_diff_acb_w37,long_SD_3_w1 0.800 0.885
Week 37 HR+Clinical 4 0.853 6.515 0.209 symb3_diff_acb_w37,long_SD_3_w37,robust_SD_w1,BWT 0.805 0.892
Discharge HR+Clinical 4 0.851 6.877 0.215 symb3_diff_acb_w37,robust_SD_w1,long_SD_3_w37,LOS 0.798 0.891

Legend: birth weight (BWT); cross-validated area under the curve (cvAUC); heart rate (HR); length of stay (LOS)

Lift=positive predictive value at event rate / event rate; Fit=McFadden’s adjusted; r-squared=normalized AIC

Lower and upper ranges of confidence interval ranges for all models.

A model adding HR metrics from the first week after birth to birthweight led to a cvAUC of 0.827 (0.773, 0.868) with the most predictive HR metrics being low RobustSD and high LongSD3. Week37 HR data had additive value, with the optimum model combining birth weight, week1 HR, and week37 HR metrics having cvAUC 0.853 (0.805, 0.892).

Figure 1A shows the fold increased risk of CP of each of the four optimal model features along with 95% confidence intervals. Figure 1B shows these curves as a function of the percentile of the values. The output of the optimum parsimonious multivariate model is also plotted.

Figure 2A shows one hour of HR (averaged every 10 minutes) from the first week after birth for the six infants in the CP cohort with the lowest values of the HR metric we call “RobustSD”. RobustSD is a measure of variability of HR calculated using a moving threshold algorithm and was also identified in our prior work to provide good prediction of NICU mortality. 12 For week1 RobustSD, 13 infants had median values <0.32 with 6 having CP for positive predictive value (PPV) of 46%. Figure 2B shows one hour of 10 minute averaged HR from 37 weeks PMA for the six infants in the CP cohort with the highest value of the HR metric we call LongSD3. This reflects long-term variability of HR and is the cubed value of the difference in HR values 100 seconds apart. For week37 LongSD3, 17 infants had a median value >2000 with 6 infants later diagnosed with CP, giving a PPV of 35%.

Figure 2: HR patterns illustrating RobustSD and LongSD3 HR metrics for CP prediction.

Figure 2:

Figure 2:

One hour of 10-minute average HR are shown for six preterm NICU patients eventually diagnosed with CP who had the most extreme values of first week and 37 weeks PMA HR metrics included in the final prediction model. A) A low value for “RobustSD” in the first week after birth had positive predictive value (PPV) for CP of 6/13=46% B) A high value for Long SD3 at 37week PMA had PPV for CP of 6/17 = 35%. Note that these HR data are from 12 infants later diagnosed with CP (there was no overlap in infants with the lowest RobustSD week1 and the highest LongSD3 week37).

Another HR metric that was retained in the final model is symb3_diff_acb_w37 which measures the frequency of ACB patterns when the difference of the HR is quantized to a 3-letter alphabet. A high frequency of this HR pattern predicts low CP risk.

Discussion

In this large single center retrospective study of preterm NICU patients, we aimed to develop predictive models for eventual diagnosis of CP using HR data from early (first week after birth) and late (37 weeks postmenstrual age) in the NICU stay. Using HCTSA methodology, we identified a measure of low variability of every-2-second HR (RobustSD) in the first week after birth and a measure of high variability (LongSD3) at term corrected age (37 weeks’ PMA) that added to clinical variables for CP prediction. Multivariate modeling that included week 1 clinical and HR analysis gave good prediction (AUC 0.827), and adding week 37 HR data significantly improved prediction (AUC 0.853).

Low variability of HR is a sign of autonomic nervous system dysfunction and has been shown by us and others to be associated with severity of acute brain injury and risk for adverse outcomes in neonates.6,9,1721The current study builds on our prior work on CP prediction in which we used simple HR metrics (the four mathematical moments of mean, standard deviation, skewness and kurtosis) in a cohort of both preterm and term NICU patients.11 In that work, we found that low standard deviation and negative skewness of HR (toward decelerations) in the first week after birth had AUC for CP predictionWe note that in both that study and the current work we are not using traditional methods of measuring HR variability by analysis of inter-heartbeat intervals from the electrocardiogram waveform. Rather, we are using a simplified approach of analyzing the bedside monitor vital sign data files, with average HR displayed every-2-seconds,. this method has the disadvantage of not informing on sympathetic-parasympathetic balance which requires analysis of RR intervals from the ECG waveform and is complicated in neonates with fast and irregular respiratory rates. 22,23 An advantage of our method is that it is more likely to be generalizable to centers that are unable to analyze ECG waveforms but can collect and analyze HR displayed as beats per minute updated every 2 seconds on NICU bedside monitors.

In an attempt to discover novel atypical HR patterns reflecting risk for long-term neuromotor dysfunction, we deployed thousands of operations on first day HR data using HCTSA to hone in on metrics with the greatest ability to distinguish between infants with and without eventual diagnosis of CP. In our prior work on 6000 NICU patients, HCTSA was computationally intensive and we therefore performed clustering analysis to identify 20 medoid algorithms that accounted for 81% of the variance in the sample for predicting NICU mortality. In the current work we used those medoids but alsoused HR data from the first 24 hours after birth for the first pass at HCTSA to identify algorithms that predicted CP. We chose to focus on the first day after birth for this initial analysis in order to capture pathologic patterns reflecting acute inflammatory or ischemic insults in the immediate antepartum and intrapartum periods. By analyzing both previously identified mortality-predicting medoid algorithms and newly identified CP-predicting algorithms from first day HR data, we were able to greatly reduce the computational burden of HCTSA. Another important consideration is that preterm infants with severe insults and instability, at highest risk for CP, have higher chance of mortality, and the current work was limited to NICU survivors. It is likely that model performance would be even greater for predicting a combined outcome of death or CP.9,12

In contrast to our prior study which included both preterm and term infants, we focused the current analyses on preterm infants since gestational age impacts HR characteristics and CP risk. We found that birthweight was the top clinical predictor of eventual diagnosis of CP, and longer length of stay in the NICU was also associated with CP diagnosis but did not add significantly to the final model. In our cohort, sex was not a significant predictor of CP which is in contrast to other studies that have found higher CP risk among male preterm infants.2426 We found that clinical variables had good prediction of CP, with birthweight retained in the final model. Adding HR analytics from both early and later in the NICU stay greatly strengthened predictive performance with the optimum model having higher cross-validated AUC, better fit, and higher PPV at a threshold equal to the event rate. We excluded a small number of preterm infants undergoing hypothermia therapy for HIE and in the future could apply the HCTSA approach for late preterm and term infants undergoing hypothermia therapy since finding early biomarkers for adverse outcomes in this population is an important research priority.

We discovered several new HR metrics that reflect HR variability and have high predictive performance for CP. The first and strongest is a metric we call “RobustSD”, with a low value reflecting a paucity of HR accelerations and decelerations (Figure 2A). This finding of low variability of HR in week 1 predicting an adverse neurodevelopmental outcome is not surprising and is supported by prior work by us and others.6,9,10,1820,2729 An unexpected discovery that predicted CP at week 37 was very high values of a metric we call LongSD3 which reflects long-term, extremely low frequency variability. The metric is the cubed value of the difference between HR values 100 seconds apart. Figure 2B shows one hour of HR at week 37 for the six babies with CP with the highest values of LongSD3. While the physiology of this HR pattern cannot be known from this retrospective analysis, we speculate that infants at high risk for CP may have atypical autonomic control and abnormal state regulation leading to frequent spikes in HR.

A major strength of our study is availability of continuous HR data from a large number of NICU patients and our ability to deploy thousands of time series operations to discover novel HR patterns predicting long-term neuromotor dysfunction. A limitation of the study is that the monitors used at our site only display the average HR every 2-seconds. Other sites use monitors that display HR every second which would require some minor modification of the algorithms before implementation. To overcome this site variability and concerns about aliasing, models could be developed directly from the interbeat RR intervals derived from ECG waveforms. The tradeoff is the significant amount of additional data processing and management required and this may not be practical in resource-limited settings. Several other limitations deserve consideration. First, given the retrospective nature of this work, we are not able to discern whether the atypical HR pattern of high LongSD3 represents abnormal state regulation or response to external stimuli. Second, we only have standard neuroimaging (head ultrasound) and not MRI, which has some predictive value for CP. Third, we did not account for all the clinical variables that may contribute to CP risk either prenatally (intrauterine inflammation, hypoxia/ischemia, genetics), or postnatally (hypocapnia, hypoxia/ischemia, sepsis, dexamethasone exposure). 30 And finally, we did not include physical examination as an assessment for CP risk. Our NICU only recently implemented routine General Movement Assessment for preterm infants.31 Presence of cramped synchronized general movements has good ability to discriminate CP risk but we do not have general movement assessment results for the majority of infants included in this study.32 It is possible that, since performance of general movement assessment is not feasible for all infants in all NICUs, discovering biomarkers such as atypical HR patterns may identify the highest risk infants that might benefit from this specialized assessment. Another potential use of HR pattern analysis is for risk stratification in clinical trials of neuroprotective agents.

Conclusions/Significance:

Using HCTSA of every-2-second HR data from NICU bedside monitors, we discovered metrics in preterm NICU patients that reflect atypical HR variability and add to clinical variables to predict CP. With further development and external validation in large multicenter cohorts, HR analysis may serve as a biomarker for CP prediction, identifying the highest risk patients for targeted therapies prior to and after NICU discharge. Earlier therapies during periods of rapid brain development may, in turn, improve long-term functional outcomes.

Supplementary Material

supp Figure 3
supp Figure 1
supp Figure 2
Supp table 1
Supp table 3
Supp table 2

Impact Statement:

  • We discovered new heart rate characteristics predicting CP in preterm infants

  • Using every-2-second HR from two seven-day periods and highly-comparative time series analysis we found a measure of low variability HR week one after birth and a pattern of recurrent acceleration in HR at term corrected age that predicted CP

  • Combined clinical and early and late HR features had AUC 0.853 for CP prediction

Funding:

Lisa Letzkus is an iTHRIV Scholar. The iTHRIV Scholars Program is supported in part by the National Center for Advancing Translational Sciences of the National Institutes of Health under Award Numbers UL1TR003015 and KL2TR003016. Dr. Letzkus also received funding from AACPDM Pedal with Pete for this project.

Footnotes

Disclosure: No conflicts of interest

Ethics statement- Ethical approval was provided by the Institutional Review Board of University of Virginia in advance of implementation. Waiver of consent was approved. Patient consent was not required

Code Availability

Python code used to process this data is archived in Zenodo at https://doi.org/10.5281/zenodo.4321332. This version and any future versions are also available in Github at https://github.com/fairscape/hctsa-py. Our code is licensed under terms of the MIT license (https://opensource.org/licenses/MIT), and is a reimplementation in Python of most of Ben Fulcher’s original MATLAB code, available here: https://github.com/benfulcher/hctsa. Software for clustering analysis and cross-implementation testing, together with the test data, may be found here: https://doi.org/10.5281/zenodo.4627625.

Data Availability

Anonymized HR HCTSA data on UVA NICU patients, with the evidence graph for the clustering, are openly available in the University of Virginia’s LibraData archive at https://doi.org/10.18130/V3/VJXODP.

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

supp Figure 3
supp Figure 1
supp Figure 2
Supp table 1
Supp table 3
Supp table 2

Data Availability Statement

Anonymized HR HCTSA data on UVA NICU patients, with the evidence graph for the clustering, are openly available in the University of Virginia’s LibraData archive at https://doi.org/10.18130/V3/VJXODP.

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