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. 1980 Jan;94(1):185–201. doi: 10.1093/genetics/94.1.185

The Stepwise Mutation Model: An Experimental Evaluation Utilizing Hemoglobin Variants

Paul A Fuerst 1, Robert E Ferrell 1
PMCID: PMC1214133  PMID: 17248992

Abstract

The stepwise mutation model of Ohta and Kimura (1973) was proposed to explain patterns of genetic variability revealed by means of electrophoresis. The assumption that electrophoretic mobility was principally determined by unit changes in net molecular charge has been criticized by Johnson (1974, 1977). This assumption has been tested directly using hemoglobin. Twenty-seven human hemoglobin variants with known amino acid substitutions, and 26 nonhuman hemoglobins with known sequences were studied by starch gel electrophoresis. Of these hemoglobins, 60 to 70% had electrophoretic mobilities that could be predicted solely on the basis of net charge calculated from the amino acid composition alone, ignoring tertiary structure. Only four hemoglobins showed a mobility that was clearly different from an expected mobility calculated using only the net charge of the molecule. For the remaining 30% of hemoglobins studied, mobility was determined by a combination of net charge and other unidentified components, probably reflecting changes in ionization of some amino acid residues as a result of small alterations in tertiary structure due to the amino acid substitution in the variant. For the nonhuman hemoglobins, the deviation of a sample from its expected mobility increased with increasing amino acid divergence from human hemoglobin A.—It is concluded that the net electrostatic charge of a molecule is the principal determinant of electrophoretic mobility under the conditions studied. However, because of the significant deviation from strict stepwise mobility detected for 30 to 40% of the variants studied, it is further concluded that the infinite-allele model of Kimura and Crow (1964) or a "mixed model" such as that proposed by Li (1976) may be more appropriate than the stepwise mutation model for the analysis of much of the available electrophoretic data from natural populations.

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Selected References

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  1. Basset P., Beuzard Y., Garel M. C., Rosa J. Isoelectric focusing of human hemoglobin: its application to screening, to the characterization of 70 variants, and to the study of modified fractions of normal hemoglobins. Blood. 1978 May;51(5):971–982. [PubMed] [Google Scholar]
  2. Boyer S. H., Crosby E. F., Noyes A. N., Fuller G. F., Leslie S. E., Donaldson L. J., Vrablik G. R., Schaefer E. W., Jr, Thurmon T. F. Primate hemoglobins: Some sequences and some proposals concerning the character of evolution and mutation. Biochem Genet. 1971 Oct;5(5):405–448. doi: 10.1007/BF00487132. [DOI] [PubMed] [Google Scholar]
  3. Ferrell R. E., Bertin T., Young R., Barton S. A., Murillo F., Schull W. J. The Aymara of Western Bolivia. IV. Gene frequencies for eight blood groups and 19 protein and erythrocyte enzyme systems. Am J Hum Genet. 1978 Sep;30(5):539–549. [PMC free article] [PubMed] [Google Scholar]
  4. Fitch W. M. A comparison between evolutionary substitutions and variants in human hemoglobins. Ann N Y Acad Sci. 1974 Nov 29;241(0):439–448. doi: 10.1111/j.1749-6632.1974.tb21900.x. [DOI] [PubMed] [Google Scholar]
  5. Garrick M. D., Hafner R., Bricker J., Garrick L. M. Genetic variation in the primary structure of the beta chain of rabbit hemoglobin. Ann N Y Acad Sci. 1974 Nov 29;241(0):436–438. doi: 10.1111/j.1749-6632.1974.tb21899.x. [DOI] [PubMed] [Google Scholar]
  6. Johnson G. B. On the estimation of effective number of alleles from electrophoretic data. Genetics. 1974 Oct;78(2):771–776. doi: 10.1093/genetics/78.2.771. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. KIMURA M., CROW J. F. THE NUMBER OF ALLELES THAT CAN BE MAINTAINED IN A FINITE POPULATION. Genetics. 1964 Apr;49:725–738. doi: 10.1093/genetics/49.4.725. [DOI] [PMC free article] [PubMed] [Google Scholar]
  8. Li W. H. A Mixed Model of Mutation for Electrophoretic Identity of Proteins within and between Populations. Genetics. 1976 Jun;83(2):423–432. doi: 10.1093/genetics/83.2.423. [DOI] [PMC free article] [PubMed] [Google Scholar]
  9. Lin K. D., Kim Y. K., Chernoff A. I. Primary structure of the marmoset (Saguinus fusicollis) hemoglobin. I. Use of tryptic maleylated peptides in the solubilization and sequence elucidation of the alpha- and beta-chains. Biochem Genet. 1976 Jun;14(5-6):427–440. doi: 10.1007/BF00486124. [DOI] [PubMed] [Google Scholar]
  10. Marshall D. R., Brown A. H. The charge-state model of protein polymorphism in natural populations. J Mol Evol. 1975 Nov 4;6(3):149–163. doi: 10.1007/BF01732353. [DOI] [PubMed] [Google Scholar]
  11. Neel J. V. Rare variants, private polymorphisms, and locus heterozygosity in Amerindian populations. Am J Hum Genet. 1978 Sep;30(5):465–490. [PMC free article] [PubMed] [Google Scholar]
  12. OWEN J. A., SILBERMAN H. J., GOT C. Detection of haemoglobin, haemoglobin-haptoglobin complexes and other substances with peroxidase activity after zone electrophoresis. Nature. 1958 Nov 15;182(4646):1373–1373. doi: 10.1038/1821373a0. [DOI] [PubMed] [Google Scholar]
  13. Ohta T., Kimura M. A model of mutation appropriate to estimate the number of electrophoretically detectable alleles in a finite population. Genet Res. 1973 Oct;22(2):201–204. doi: 10.1017/s0016672300012994. [DOI] [PubMed] [Google Scholar]
  14. Ramshaw J. A., Coyne J. A., Lewontin R. C. The sensitivity of gel electrophoresis as a detector of genetic variation. Genetics. 1979 Dec;93(4):1019–1037. doi: 10.1093/genetics/93.4.1019. [DOI] [PMC free article] [PubMed] [Google Scholar]
  15. Retzios A. D., Thatcher D. R. Chemical basis of the electrophoretic variation observed at the alcohol dehydrogenase locus of Drosophila melanogaster. Biochimie. 1979;61(5-6):701–704. doi: 10.1016/s0300-9084(79)80169-8. [DOI] [PubMed] [Google Scholar]
  16. Schneider R. G., Barwick R. C. Measuring relative electrophoretic mobilities of mutant hemoglobins and globin chains. Hemoglobin. 1978;2(5):417–435. doi: 10.3109/03630267809007076. [DOI] [PubMed] [Google Scholar]
  17. Stenzel P., Brimhall B. Preliminary survey of carnivore hemoglobin compositions. Conclusions. J Mol Evol. 1977 May 13;9(3):273–278. doi: 10.1007/BF01796115. [DOI] [PubMed] [Google Scholar]
  18. Ueda N., Satoh C., Tanis R. J., Ferrell R. E., Kishimoto S., Neel J. V., Hamilton H. B., Baba K. The frequency in Japanese of genetic variants of 22 proteins II. Carbonic anhydrase I and II, lactate dehydrogenase, malate dehydrogenase, nucleoside phosphorylase, triose phosphate isomerase, haemoglobin A and haemoglobin A2. Ann Hum Genet. 1977 Jul;41(1):43–52. doi: 10.1111/j.1469-1809.1977.tb01960.x. [DOI] [PubMed] [Google Scholar]

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