Abstract
By using oligonucleotide primers derived from regions highly conserved in prokaryotic and eukaryotic phosphofructokinase sequences, a genomic DNA fragment was amplified and used to isolate cDNA and genomic clones coding for PPi-dependent phosphofructokinase (PPi-PFK) of Entamoeba histolytica. The open reading frame consists of 1308 bp and the corresponding protein has a calculated molecular mass of 47.6 kDa. The N-terminal half of the protein shows 27-35% identity with PPi-PFKs or ATP-dependent phosphofructokinases (ATP-PFKs) of various eukaryotic and prokaryotic organisms. The amino acid residues that form the active site of the PPi-PFK from Propionibacterium freudenreichii and the allosteric ATP-PFK from Escherichia coli are conserved within the amoeba sequence. The PPi-PFK was recombinantly expressed by using a prokaryotic expression system. The purified recombinant protein was found to be enzymically active. The K(m) values for PPi and fructose 6-phosphate of the native and the recombinant PPi-PFKs were nearly identical. Various bisphosphonates (synthetic pyrophosphate analogues) were tested for their ability to inhibit PPi-PFK activity or amoebic growth. All bisphosphonates tested were competitive inhibitors for amoeba PPi-PFK activity. The best inhibitors were CGP 48048 and zoledronate, with Ki values of 50 microM. All bisphosphonates inhibited amoebic growth. One of them (risedronate) was inhibitory at a concentration of 10 microM. Bisphosphonates are therefore potential therapeutic agents for the treatment of amoebiasis.
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- Bradford M. M. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem. 1976 May 7;72:248–254. doi: 10.1006/abio.1976.9999. [DOI] [PubMed] [Google Scholar]
- Bruchhaus I., Leippe M., Lioutas C., Tannich E. Unusual gene organization in the protozoan parasite Entamoeba histolytica. DNA Cell Biol. 1993 Dec;12(10):925–933. doi: 10.1089/dna.1993.12.925. [DOI] [PubMed] [Google Scholar]
- Bruchhaus I., Tannich E. Primary structure of the pyruvate phosphate dikinase in Entamoeba histolytica. Mol Biochem Parasitol. 1993 Nov;62(1):153–156. doi: 10.1016/0166-6851(93)90193-2. [DOI] [PubMed] [Google Scholar]
- Carlisle S. M., Blakeley S. D., Hemmingsen S. M., Trevanion S. J., Hiyoshi T., Kruger N. J., Dennis D. T. Pyrophosphate-dependent phosphofructokinase. Conservation of protein sequence between the alpha- and beta-subunits and with the ATP-dependent phosphofructokinase. J Biol Chem. 1990 Oct 25;265(30):18366–18371. [PubMed] [Google Scholar]
- Carnal N. W., Black C. C. Phosphofructokinase activities in photosynthetic organisms : the occurrence of pyrophosphate-dependent 6-phosphofructokinase in plants and algae. Plant Physiol. 1983 Jan;71(1):150–155. doi: 10.1104/pp.71.1.150. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Chevalier C., Saillard C., Bové J. M. Organization and nucleotide sequences of the Spiroplasma citri genes for ribosomal protein S2, elongation factor Ts, spiralin, phosphofructokinase, pyruvate kinase, and an unidentified protein. J Bacteriol. 1990 May;172(5):2693–2703. doi: 10.1128/jb.172.5.2693-2703.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Clos J., Brandau S. pJC20 and pJC40--two high-copy-number vectors for T7 RNA polymerase-dependent expression of recombinant genes in Escherichia coli. Protein Expr Purif. 1994 Apr;5(2):133–137. doi: 10.1006/prep.1994.1020. [DOI] [PubMed] [Google Scholar]
- Diamond L. S., Harlow D. R., Cunnick C. C. A new medium for the axenic cultivation of Entamoeba histolytica and other Entamoeba. Trans R Soc Trop Med Hyg. 1978;72(4):431–432. doi: 10.1016/0035-9203(78)90144-x. [DOI] [PubMed] [Google Scholar]
- Ding J., Su J. G., Mansour T. E. Cloning and characterization of a cDNA encoding phosphofructokinase from Schistosoma mansoni. Mol Biochem Parasitol. 1994 Jul;66(1):105–110. doi: 10.1016/0166-6851(94)90040-x. [DOI] [PubMed] [Google Scholar]
- Eubank W. B., Reeves R. E. Analog inhibitors for the pyrophosphate-dependent phosphofructokinase of Entamoeba histolytica and their effect on culture growth. J Parasitol. 1982 Aug;68(4):599–602. [PubMed] [Google Scholar]
- Fleisch H. Bisphosphonates. Pharmacology and use in the treatment of tumour-induced hypercalcaemic and metastatic bone disease. Drugs. 1991 Dec;42(6):919–944. doi: 10.2165/00003495-199142060-00003. [DOI] [PubMed] [Google Scholar]
- French B. A., Chang S. H. Nucleotide sequence of the phosphofructokinase gene from Bacillus stearothermophilus and comparison with the homologous Escherichia coli gene. Gene. 1987;54(1):65–71. doi: 10.1016/0378-1119(87)90348-9. [DOI] [PubMed] [Google Scholar]
- Hasegawa M., Hashimoto T., Adachi J., Iwabe N., Miyata T. Early branchings in the evolution of eukaryotes: ancient divergence of entamoeba that lacks mitochondria revealed by protein sequence data. J Mol Evol. 1993 Apr;36(4):380–388. doi: 10.1007/BF00182185. [DOI] [PubMed] [Google Scholar]
- Huang M., Albach R. A., Chang K. P., Tripathi R. L., Kemp R. G. Cloning and sequencing a putative pyrophosphate-dependent phosphofructokinase gene from Entamoeba histolytica. Biochim Biophys Acta. 1995 Jan 25;1260(2):215–217. doi: 10.1016/0167-4781(94)00216-p. [DOI] [PubMed] [Google Scholar]
- Ladror U. S., Gollapudi L., Tripathi R. L., Latshaw S. P., Kemp R. G. Cloning, sequencing, and expression of pyrophosphate-dependent phosphofructokinase from Propionibacterium freudenreichii. J Biol Chem. 1991 Sep 5;266(25):16550–16555. [PubMed] [Google Scholar]
- Lombardi A., Santora A. C. Clinical trials with bisphosphonates. Ann Ital Med Int. 1992 Jul-Sep;7(3 Suppl):158S–165S. [PubMed] [Google Scholar]
- Mertens E. ATP versus pyrophosphate: glycolysis revisited in parasitic protists. Parasitol Today. 1993 Apr;9(4):122–126. doi: 10.1016/0169-4758(93)90169-g. [DOI] [PubMed] [Google Scholar]
- Mertens E., De Jonckheere J., Van Schaftingen E. Pyrophosphate-dependent phosphofructokinase from the amoeba Naegleria fowleri, an AMP-sensitive enzyme. Biochem J. 1993 Jun 15;292(Pt 3):797–803. doi: 10.1042/bj2920797. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Mertens E. Occurrence of pyrophosphate:fructose 6-phosphate 1-phosphotransferase in Giardia lamblia trophozoites. Mol Biochem Parasitol. 1990 Apr;40(1):147–149. doi: 10.1016/0166-6851(90)90088-4. [DOI] [PubMed] [Google Scholar]
- Mertens E., Van Schaftingen E., Müller M. Presence of a fructose-2,6-bisphosphate-insensitive pyrophosphate: fructose-6-phosphate phosphotransferase in the anaerobic protozoa Tritrichomonas foetus, Trichomonas vaginalis and Isotricha prostoma. Mol Biochem Parasitol. 1989 Dec;37(2):183–190. doi: 10.1016/0166-6851(89)90150-3. [DOI] [PubMed] [Google Scholar]
- O'Brien W. E., Bowien S., Wood H. G. Isolation and characterization of a pyrophosphate-dependent phosphofructokinase from Propionibacterium shermanii. J Biol Chem. 1975 Nov 25;250(22):8690–8695. [PubMed] [Google Scholar]
- Pearson W. R., Lipman D. J. Improved tools for biological sequence comparison. Proc Natl Acad Sci U S A. 1988 Apr;85(8):2444–2448. doi: 10.1073/pnas.85.8.2444. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Peng Z. Y., Mansour T. E. Purification and properties of a pyrophosphate-dependent phosphofructokinase from Toxoplasma gondii. Mol Biochem Parasitol. 1992 Sep;54(2):223–230. doi: 10.1016/0166-6851(92)90114-y. [DOI] [PubMed] [Google Scholar]
- Petzel J. P., McElwain M. C., DeSantis D., Manolukas J., Williams M. V., Hartman P. A., Allison M. J., Pollack J. D. Enzymic activities of carbohydrate, purine, and pyrimidine metabolism in the Anaeroplasmataceae (class Mollicutes). Arch Microbiol. 1989;152(4):309–316. doi: 10.1007/BF00425166. [DOI] [PubMed] [Google Scholar]
- Reeves R. E., Serrano R., South D. J. 6-phosphofructokinase (pyrophosphate). Properties of the enzyme from Entamoeba histolytica and its reaction mechanism. J Biol Chem. 1976 May 25;251(10):2958–2962. [PubMed] [Google Scholar]
- Reeves R. E., South D. J., Blytt H. J., Warren L. G. Pyrophosphate:D-fructose 6-phosphate 1-phosphotransferase. A new enzyme with the glycolytic function of 6-phosphofructokinase. J Biol Chem. 1974 Dec 25;249(24):7737–7741. [PubMed] [Google Scholar]
- Saiki R. K., Gelfand D. H., Stoffel S., Scharf S. J., Higuchi R., Horn G. T., Mullis K. B., Erlich H. A. Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase. Science. 1988 Jan 29;239(4839):487–491. doi: 10.1126/science.2448875. [DOI] [PubMed] [Google Scholar]
- Sharma P. M., Reddy G. R., Vora S., Babior B. M., McLachlan A. Cloning and expression of a human muscle phosphofructokinase cDNA. Gene. 1989 Apr 15;77(1):177–183. doi: 10.1016/0378-1119(89)90372-7. [DOI] [PubMed] [Google Scholar]
- Shirakihara Y., Evans P. R. Crystal structure of the complex of phosphofructokinase from Escherichia coli with its reaction products. J Mol Biol. 1988 Dec 20;204(4):973–994. doi: 10.1016/0022-2836(88)90056-3. [DOI] [PubMed] [Google Scholar]
- Sogin M. L., Hinkle G., Leipe D. D. Universal tree of life. Nature. 1993 Apr 29;362(6423):795–795. doi: 10.1038/362795a0. [DOI] [PubMed] [Google Scholar]
- Tannich E., Bruchhaus I., Walter R. D., Horstmann R. D. Pathogenic and nonpathogenic Entamoeba histolytica: identification and molecular cloning of an iron-containing superoxide dismutase. Mol Biochem Parasitol. 1991 Nov;49(1):61–71. doi: 10.1016/0166-6851(91)90130-x. [DOI] [PubMed] [Google Scholar]
- Wood H. G., O'brien W. E., Micheales G. Properties of carboxytransphosphorylase; pyruvate, phosphate dikinase; pyrophosphate-phosphofructikinase and pyrophosphate-acetate kinase and their roles in the metabolism of inorganic pyrophosphate. Adv Enzymol Relat Areas Mol Biol. 1977;45:85–155. doi: 10.1002/9780470122907.ch2. [DOI] [PubMed] [Google Scholar]
- Xu J., Green P. C., Kemp R. G. Identification of basic residues involved in substrate binding and catalysis by pyrophosphate-dependent phosphofructokinase from Propionibacterium freudenreichii. J Biol Chem. 1994 Jun 3;269(22):15553–15557. [PubMed] [Google Scholar]