Skip to main content
Biochemical Journal logoLink to Biochemical Journal
. 1997 Sep 1;326(Pt 2):361–367. doi: 10.1042/bj3260361

Co-operation of the 5' and 3' untranslated regions of ornithine decarboxylase mRNA and inhibitory role of its 3' untranslated region in regulating the translational efficiency of hybrid RNA species via cellular factor.

E C Lorenzini 1, I E Scheffler 1
PMCID: PMC1218679  PMID: 9291106

Abstract

The 5' untranslated region (UTR) has an inhibitory role in the translatability of ornithine decarboxylase (ODC) mRNA and of hybrid mRNA species, whereas the ODC 3' UTR causes a partial release of this inhibition. We designed experiments to explore whether the co-operation between ODC 5' UTR and 3' UTR in the translational regulation is due to a direct interaction of those sequences or whether it is mediated by their interaction with cellular factor(s). We stably transfected Chinese hamster ovary (CHO)-K1 cells and transiently transfected COS-1 cells with expression vectors carrying different chimaeric DNAs having the luciferase (LUC) coding sequence as reporter gene, the ODC 5' UTR or the ODC 3' UTR, or both, in the appropriate positions. We compared the results obtained by assaying the LUC activities of both transfected cell lines with each chimaeric DNA with those observed by translating the hybrid RNAs in a translation system in vitro. When the ODC 3' UTR was present, we observed a partial release of the translation inhibition owing to the ODC 5' UTR only in vivo. The releasing effect was restored in vitro by the addition of cytoplasmic extracts from wild-type CHO-K1 or COS-1 cells, prepared 2 and 8 h after their release from serum starvation. We also observed a partial inhibition of the translatability of the hybrid RNA owing to the presence of the ODC 3' UTR itself; the translational efficiency could be rescued by cell extract from 8 h serum-stimulated cells. The co-operation between the ODC-UTRs might be mediated by factors expressed by cells during particular phases of the cell cycle. Excess copies of the ODC-UTRs, expressed in trans, could compete in binding limited amounts of such regulatory factors and remove them from interaction with the endogenous ODC mRNA. This phenomenon should be reflected by modifications of the kinetics of ODC and/or LUC activities during serum stimulation. The overexpression of the ODC 3' UTR determined an increase in both endogenous ODC activity and LUC activity. Moreover, in the transfectants expressing the hybrid RNA species bearing the ODC 3' UTR the basal ODC activity is higher than that observed in control cells. We suggest that excess copies of the ODC 3' UTR mis-regulate the endogenous ODC translatability, probably by tying up regulatory molecules expressed by cells in limited amounts and sequestering them from the ODC mRNA species they should interact with.

Full Text

The Full Text of this article is available as a PDF (391.9 KB).

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Autelli R., Holm I., Heby O., Persson L. Feedback regulation of ornithine decarboxylase expression. Studies using a polysomal run-off system. FEBS Lett. 1990 Jan 15;260(1):39–41. doi: 10.1016/0014-5793(90)80060-v. [DOI] [PubMed] [Google Scholar]
  2. Auvinen M., Paasinen A., Andersson L. C., Hölttä E. Ornithine decarboxylase activity is critical for cell transformation. Nature. 1992 Nov 26;360(6402):355–358. doi: 10.1038/360355a0. [DOI] [PubMed] [Google Scholar]
  3. Ch'ng J. L., Shoemaker D. L., Schimmel P., Holmes E. W. Reversal of creatine kinase translational repression by 3' untranslated sequences. Science. 1990 May 25;248(4958):1003–1006. doi: 10.1126/science.2343304. [DOI] [PubMed] [Google Scholar]
  4. Chomczynski P., Sacchi N. Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Anal Biochem. 1987 Apr;162(1):156–159. doi: 10.1006/abio.1987.9999. [DOI] [PubMed] [Google Scholar]
  5. Christensen A. K., Kahn L. E., Bourne C. M. Circular polysomes predominate on the rough endoplasmic reticulum of somatotropes and mammotropes in the rat anterior pituitary. Am J Anat. 1987 Jan;178(1):1–10. doi: 10.1002/aja.1001780102. [DOI] [PubMed] [Google Scholar]
  6. Clemens M. J. Regulatory mechanisms in translational control. Curr Opin Cell Biol. 1989 Dec;1(6):1160–1167. doi: 10.1016/s0955-0674(89)80067-5. [DOI] [PubMed] [Google Scholar]
  7. Decker C. J., Parker R. Diversity of cytoplasmic functions for the 3' untranslated region of eukaryotic transcripts. Curr Opin Cell Biol. 1995 Jun;7(3):386–392. doi: 10.1016/0955-0674(95)80094-8. [DOI] [PubMed] [Google Scholar]
  8. Dignam J. D., Lebovitz R. M., Roeder R. G. Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei. Nucleic Acids Res. 1983 Mar 11;11(5):1475–1489. doi: 10.1093/nar/11.5.1475. [DOI] [PMC free article] [PubMed] [Google Scholar]
  9. Dunn W. C., Tano K., Horesovsky G. J., Preston R. J., Mitra S. The role of O6-alkylguanine in cell killing and mutagenesis in Chinese hamster ovary cells. Carcinogenesis. 1991 Jan;12(1):83–89. doi: 10.1093/carcin/12.1.83. [DOI] [PubMed] [Google Scholar]
  10. Fredlund J. O., Johansson M. C., Dahlberg E., Oredsson S. M. Ornithine decarboxylase and S-adenosylmethionine decarboxylase expression during the cell cycle of Chinese hamster ovary cells. Exp Cell Res. 1995 Jan;216(1):86–92. doi: 10.1006/excr.1995.1011. [DOI] [PubMed] [Google Scholar]
  11. Gillis P., Malter J. S. The adenosine-uridine binding factor recognizes the AU-rich elements of cytokine, lymphokine, and oncogene mRNAs. J Biol Chem. 1991 Feb 15;266(5):3172–3177. [PubMed] [Google Scholar]
  12. Goodwin E. B., Okkema P. G., Evans T. C., Kimble J. Translational regulation of tra-2 by its 3' untranslated region controls sexual identity in C. elegans. Cell. 1993 Oct 22;75(2):329–339. doi: 10.1016/0092-8674(93)80074-o. [DOI] [PubMed] [Google Scholar]
  13. Grens A., Scheffler I. E. The 5'- and 3'-untranslated regions of ornithine decarboxylase mRNA affect the translational efficiency. J Biol Chem. 1990 Jul 15;265(20):11810–11816. [PubMed] [Google Scholar]
  14. Heby O., Persson L. Molecular genetics of polyamine synthesis in eukaryotic cells. Trends Biochem Sci. 1990 Apr;15(4):153–158. doi: 10.1016/0968-0004(90)90216-x. [DOI] [PubMed] [Google Scholar]
  15. Jackson R. J. Cytoplasmic regulation of mRNA function: the importance of the 3' untranslated region. Cell. 1993 Jul 16;74(1):9–14. doi: 10.1016/0092-8674(93)90290-7. [DOI] [PubMed] [Google Scholar]
  16. Jackson R. J., Standart N. Do the poly(A) tail and 3' untranslated region control mRNA translation? Cell. 1990 Jul 13;62(1):15–24. doi: 10.1016/0092-8674(90)90235-7. [DOI] [PubMed] [Google Scholar]
  17. Jänne O. A., Kontula K. K., Isomaa V. V., Bardin C. W. Ornithine decarboxylase mRNA in mouse kidney: a low abundancy gene product regulated by androgens with rapid kinetics. Ann N Y Acad Sci. 1984;438:72–84. doi: 10.1111/j.1749-6632.1984.tb38277.x. [DOI] [PubMed] [Google Scholar]
  18. Kanamoto R., Boyle S. M., Oka T., Hayashi S. Molecular mechanisms of the synergistic induction of ornithine decarboxylase by asparagine and glucagon in primary cultured hepatocytes. J Biol Chem. 1987 Oct 25;262(30):14801–14805. [PubMed] [Google Scholar]
  19. Kozak M. Structural features in eukaryotic mRNAs that modulate the initiation of translation. J Biol Chem. 1991 Oct 25;266(30):19867–19870. [PubMed] [Google Scholar]
  20. Kruys V., Wathelet M., Poupart P., Contreras R., Fiers W., Content J., Huez G. The 3' untranslated region of the human interferon-beta mRNA has an inhibitory effect on translation. Proc Natl Acad Sci U S A. 1987 Sep;84(17):6030–6034. doi: 10.1073/pnas.84.17.6030. [DOI] [PMC free article] [PubMed] [Google Scholar]
  21. Landy-Otsuka F., Scheffler I. E. Induction of ornithine decarboxylase activity in a temperature-sensitive cell cycle mutant of Chinese hamster cells. Proc Natl Acad Sci U S A. 1978 Oct;75(10):5001–5005. doi: 10.1073/pnas.75.10.5001. [DOI] [PMC free article] [PubMed] [Google Scholar]
  22. Lövkvist E., Stjernborg L., Persson L. Feedback regulation of mammalian ornithine decarboxylase. Studies using a transient expression system. Eur J Biochem. 1993 Aug 1;215(3):753–759. doi: 10.1111/j.1432-1033.1993.tb18089.x. [DOI] [PubMed] [Google Scholar]
  23. Manzella J. M., Blackshear P. J. Specific protein binding to a conserved region of the ornithine decarboxylase mRNA 5'-untranslated region. J Biol Chem. 1992 Apr 5;267(10):7077–7082. [PubMed] [Google Scholar]
  24. Manzella J. M., Rychlik W., Rhoads R. E., Hershey J. W., Blackshear P. J. Insulin induction of ornithine decarboxylase. Importance of mRNA secondary structure and phosphorylation of eucaryotic initiation factors eIF-4B and eIF-4E. J Biol Chem. 1991 Feb 5;266(4):2383–2389. [PubMed] [Google Scholar]
  25. McBratney S., Chen C. Y., Sarnow P. Internal initiation of translation. Curr Opin Cell Biol. 1993 Dec;5(6):961–965. doi: 10.1016/0955-0674(93)90077-4. [DOI] [PubMed] [Google Scholar]
  26. McCarthy J. E., Kollmus H. Cytoplasmic mRNA-protein interactions in eukaryotic gene expression. Trends Biochem Sci. 1995 May;20(5):191–197. doi: 10.1016/s0968-0004(00)89006-4. [DOI] [PubMed] [Google Scholar]
  27. McConlogue L., Dana S. L., Coffino P. Multiple mechanisms are responsible for altered expression of ornithine decarboxylase in overproducing variant cells. Mol Cell Biol. 1986 Aug;6(8):2865–2871. doi: 10.1128/mcb.6.8.2865. [DOI] [PMC free article] [PubMed] [Google Scholar]
  28. Munroe D., Jacobson A. mRNA poly(A) tail, a 3' enhancer of translational initiation. Mol Cell Biol. 1990 Jul;10(7):3441–3455. doi: 10.1128/mcb.10.7.3441. [DOI] [PMC free article] [PubMed] [Google Scholar]
  29. Murakami Y., Tanahashi N., Tanaka K., Omura S., Hayashi S. Proteasome pathway operates for the degradation of ornithine decarboxylase in intact cells. Biochem J. 1996 Jul 1;317(Pt 1):77–80. doi: 10.1042/bj3170077. [DOI] [PMC free article] [PubMed] [Google Scholar]
  30. Ostareck-Lederer A., Ostareck D. H., Standart N., Thiele B. J. Translation of 15-lipoxygenase mRNA is inhibited by a protein that binds to a repeated sequence in the 3' untranslated region. EMBO J. 1994 Mar 15;13(6):1476–1481. doi: 10.1002/j.1460-2075.1994.tb06402.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  31. Pegg A. E., Shantz L. M., Coleman C. S. Ornithine decarboxylase: structure, function and translational regulation. Biochem Soc Trans. 1994 Nov;22(4):846–852. doi: 10.1042/bst0220846. [DOI] [PubMed] [Google Scholar]
  32. Pyronnet S., Vagner S., Bouisson M., Prats A. C., Vaysse N., Pradayrol L. Relief of ornithine decarboxylase messenger RNA translational repression induced by alternative splicing of its 5' untranslated region. Cancer Res. 1996 Apr 15;56(8):1742–1745. [PubMed] [Google Scholar]
  33. Rastinejad F., Blau H. M. Genetic complementation reveals a novel regulatory role for 3' untranslated regions in growth and differentiation. Cell. 1993 Mar 26;72(6):903–917. doi: 10.1016/0092-8674(93)90579-f. [DOI] [PubMed] [Google Scholar]
  34. Rastinejad F., Conboy M. J., Rando T. A., Blau H. M. Tumor suppression by RNA from the 3' untranslated region of alpha-tropomyosin. Cell. 1993 Dec 17;75(6):1107–1117. doi: 10.1016/0092-8674(93)90320-p. [DOI] [PubMed] [Google Scholar]
  35. Rivera-Pomar R., Niessing D., Schmidt-Ott U., Gehring W. J., Jäckle H. RNA binding and translational suppression by bicoid. Nature. 1996 Feb 22;379(6567):746–749. doi: 10.1038/379746a0. [DOI] [PubMed] [Google Scholar]
  36. Shantz L. M., Pegg A. E. Overproduction of ornithine decarboxylase caused by relief of translational repression is associated with neoplastic transformation. Cancer Res. 1994 May 1;54(9):2313–2316. [PubMed] [Google Scholar]
  37. Sonenberg N. Translation factors as effectors of cell growth and tumorigenesis. Curr Opin Cell Biol. 1993 Dec;5(6):955–960. doi: 10.1016/0955-0674(93)90076-3. [DOI] [PubMed] [Google Scholar]
  38. Tamori A., Nishiguchi S., Kuroki T., Koh N., Kobayashi K., Yano Y., Otani S. Point mutation of ornithine decarboxylase gene in human hepatocellular carcinoma. Cancer Res. 1995 Aug 15;55(16):3500–3503. [PubMed] [Google Scholar]
  39. Van Steeg H., Van Oostrom C. T., Hodemaekers H. M., Peters L., Thomas A. A. The translation in vitro of rat ornithine decarboxylase mRNA is blocked by its 5' untranslated region in a polyamine-independent way. Biochem J. 1991 Mar 1;274(Pt 2):521–526. doi: 10.1042/bj2740521. [DOI] [PMC free article] [PubMed] [Google Scholar]
  40. Wickens M. Messenger RNA. Springtime in the desert. Nature. 1993 May 27;363(6427):305–306. doi: 10.1038/363305a0. [DOI] [PubMed] [Google Scholar]
  41. de Wet J. R., Wood K. V., DeLuca M., Helinski D. R., Subramani S. Firefly luciferase gene: structure and expression in mammalian cells. Mol Cell Biol. 1987 Feb;7(2):725–737. doi: 10.1128/mcb.7.2.725. [DOI] [PMC free article] [PubMed] [Google Scholar]

Articles from Biochemical Journal are provided here courtesy of The Biochemical Society

RESOURCES