Abstract
Four mini-scaffoldins were constructed from modules derived from the Clostridium thermocellum cellulosome-integrating protein CipA. Cip7 and Cip6 contained one and two cohesin modules respectively. Cip14 and Cip16, also containing one and two cohesin modules respectively, were flanked by a cellulose-binding domain. Endoglucanase CelD formed stable complexes with all mini-scaffoldins. Analytical ultracentrifugation of the complexes showed that 1 mol of CelD bound per mol of Cip14, and 2 mol of CelD bound per mol of Cip16. Under the conditions used for assaying cellulase activity, 96% of CelD alone bound to Avicel. Association with Cip14 or Cip16 increased the cellulose binding of CelD to 99%, while association with Cip7 or Cip6 decreased binding to 79 and 75% respectively. The hydrolytic activity of CelD against Avicel was increased 3-fold in complexes with Cip14 and Cip16, but remained substantially the same in complexes with Cip6 and Cip7. Addition of whole CipA also enhanced the efficiency of Avicel hydrolysis by CelD. However, even at an optimal ratio of the components, CelD-CipA complexes were somewhat less active than complexes of CelD with Cip14 or Cip16. These results suggest that the synergism observed between CelD and Cip14 or Cip16 is mostly due to the presence of the cellulose-binding domain, which promotes productive binding of the enzyme.
Full Text
The Full Text of this article is available as a PDF (410.3 KB).
Selected References
These references are in PubMed. This may not be the complete list of references from this article.
- Bayer E. A., Morag E., Lamed R. The cellulosome--a treasure-trove for biotechnology. Trends Biotechnol. 1994 Sep;12(9):379–386. doi: 10.1016/0167-7799(94)90039-6. [DOI] [PubMed] [Google Scholar]
- Bhat S., Goodenough P. W., Bhat M. K., Owen E. Isolation of four major subunits from Clostridium thermocellum cellulosome and their synergism in the hydrolysis of crystalline cellulose. Int J Biol Macromol. 1994 Dec;16(6):335–342. doi: 10.1016/0141-8130(94)90066-3. [DOI] [PubMed] [Google Scholar]
- Béguin P., Aubert J. P. The biological degradation of cellulose. FEMS Microbiol Rev. 1994 Jan;13(1):25–58. doi: 10.1111/j.1574-6976.1994.tb00033.x. [DOI] [PubMed] [Google Scholar]
- Béguin P., Lemaire M. The cellulosome: an exocellular, multiprotein complex specialized in cellulose degradation. Crit Rev Biochem Mol Biol. 1996 Jun;31(3):201–236. doi: 10.3109/10409239609106584. [DOI] [PubMed] [Google Scholar]
- Béguin P., Raynaud O., Chaveroche M. K., Dridi A., Alzari P. M. Subcloning of a DNA fragment encoding a single cohesin domain of the Clostridium thermocellum cellulosome-integrating protein CipA: purification, crystallization, and preliminary diffraction analysis of the encoded polypeptide. Protein Sci. 1996 Jun;5(6):1192–1194. doi: 10.1002/pro.5560050623. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Chauvaux S., Beguin P., Aubert J. P., Bhat K. M., Gow L. A., Wood T. M., Bairoch A. Calcium-binding affinity and calcium-enhanced activity of Clostridium thermocellum endoglucanase D. Biochem J. 1990 Jan 1;265(1):261–265. doi: 10.1042/bj2650261. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Din N., Damude H. G., Gilkes N. R., Miller R. C., Jr, Warren R. A., Kilburn D. G. C1-Cx revisited: intramolecular synergism in a cellulase. Proc Natl Acad Sci U S A. 1994 Nov 22;91(24):11383–11387. doi: 10.1073/pnas.91.24.11383. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Felix C. R., Ljungdahl L. G. The cellulosome: the exocellular organelle of Clostridium. Annu Rev Microbiol. 1993;47:791–819. doi: 10.1146/annurev.mi.47.100193.004043. [DOI] [PubMed] [Google Scholar]
- Fierobe H. P., Bagnara-Tardif C., Gaudin C., Guerlesquin F., Sauve P., Belaich A., Belaich J. P. Purification and characterization of endoglucanase C from Clostridium cellulolyticum. Catalytic comparison with endoglucanase A. Eur J Biochem. 1993 Oct 15;217(2):557–565. doi: 10.1111/j.1432-1033.1993.tb18277.x. [DOI] [PubMed] [Google Scholar]
- Fierobe H. P., Gaudin C., Belaich A., Loutfi M., Faure E., Bagnara C., Baty D., Belaich J. P. Characterization of endoglucanase A from Clostridium cellulolyticum. J Bacteriol. 1991 Dec;173(24):7956–7962. doi: 10.1128/jb.173.24.7956-7962.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Fujino T., Béguin P., Aubert J. P. Cloning of a Clostridium thermocellum DNA fragment encoding polypeptides that bind the catalytic components of the cellulosome. FEMS Microbiol Lett. 1992 Jul 1;73(1-2):165–170. doi: 10.1016/0378-1097(92)90602-k. [DOI] [PubMed] [Google Scholar]
- Gerngross U. T., Romaniec M. P., Kobayashi T., Huskisson N. S., Demain A. L. Sequencing of a Clostridium thermocellum gene (cipA) encoding the cellulosomal SL-protein reveals an unusual degree of internal homology. Mol Microbiol. 1993 Apr;8(2):325–334. doi: 10.1111/j.1365-2958.1993.tb01576.x. [DOI] [PubMed] [Google Scholar]
- Gilkes N. R., Henrissat B., Kilburn D. G., Miller R. C., Jr, Warren R. A. Domains in microbial beta-1, 4-glycanases: sequence conservation, function, and enzyme families. Microbiol Rev. 1991 Jun;55(2):303–315. doi: 10.1128/mr.55.2.303-315.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Janknecht R., de Martynoff G., Lou J., Hipskind R. A., Nordheim A., Stunnenberg H. G. Rapid and efficient purification of native histidine-tagged protein expressed by recombinant vaccinia virus. Proc Natl Acad Sci U S A. 1991 Oct 15;88(20):8972–8976. doi: 10.1073/pnas.88.20.8972. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kohring S., Wiegel J., Mayer F. Subunit Composition and Glycosidic Activities of the Cellulase Complex from Clostridium thermocellum JW20. Appl Environ Microbiol. 1990 Dec;56(12):3798–3804. doi: 10.1128/aem.56.12.3798-3804.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Laemmli U. K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature. 1970 Aug 15;227(5259):680–685. doi: 10.1038/227680a0. [DOI] [PubMed] [Google Scholar]
- Lamed R., Setter E., Bayer E. A. Characterization of a cellulose-binding, cellulase-containing complex in Clostridium thermocellum. J Bacteriol. 1983 Nov;156(2):828–836. doi: 10.1128/jb.156.2.828-836.1983. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Mayer F., Coughlan M. P., Mori Y., Ljungdahl L. G. Macromolecular Organization of the Cellulolytic Enzyme Complex of Clostridium thermocellum as Revealed by Electron Microscopy. Appl Environ Microbiol. 1987 Dec;53(12):2785–2792. doi: 10.1128/aem.53.12.2785-2792.1987. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Messing J., Crea R., Seeburg P. H. A system for shotgun DNA sequencing. Nucleic Acids Res. 1981 Jan 24;9(2):309–321. doi: 10.1093/nar/9.2.309. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Morag E., Lapidot A., Govorko D., Lamed R., Wilchek M., Bayer E. A., Shoham Y. Expression, purification, and characterization of the cellulose-binding domain of the scaffoldin subunit from the cellulosome of Clostridium thermocellum. Appl Environ Microbiol. 1995 May;61(5):1980–1986. doi: 10.1128/aem.61.5.1980-1986.1995. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Moreno J. D., Bayer R. The limits of the ledger in public health promotion. Hastings Cent Rep. 1985 Dec;15(6):37–41. [PubMed] [Google Scholar]
- SMOGYI M. Notes on sugar determination. J Biol Chem. 1952 Mar;195(1):19–23. [PubMed] [Google Scholar]
- Salamitou S., Raynaud O., Lemaire M., Coughlan M., Béguin P., Aubert J. P. Recognition specificity of the duplicated segments present in Clostridium thermocellum endoglucanase CelD and in the cellulosome-integrating protein CipA. J Bacteriol. 1994 May;176(10):2822–2827. doi: 10.1128/jb.176.10.2822-2827.1994. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Studier F. W., Moffatt B. A. Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes. J Mol Biol. 1986 May 5;189(1):113–130. doi: 10.1016/0022-2836(86)90385-2. [DOI] [PubMed] [Google Scholar]
- Tokatlidis K., Dhurjati P., Béguin P. Properties conferred on Clostridium thermocellum endoglucanase CelC by grafting the duplicated segment of endoglucanase CelD. Protein Eng. 1993 Nov;6(8):947–952. doi: 10.1093/protein/6.8.947. [DOI] [PubMed] [Google Scholar]
- Tokatlidis K., Dhurjati P., Millet J., Béguin P., Aubert J. P. High activity of inclusion bodies formed in Escherichia coli overproducing Clostridium thermocellum endoglucanase D. FEBS Lett. 1991 Apr 22;282(1):205–208. doi: 10.1016/0014-5793(91)80478-l. [DOI] [PubMed] [Google Scholar]
- Tokatlidis K., Salamitou S., Béguin P., Dhurjati P., Aubert J. P. Interaction of the duplicated segment carried by Clostridium thermocellum cellulases with cellulosome components. FEBS Lett. 1991 Oct 21;291(2):185–188. doi: 10.1016/0014-5793(91)81279-h. [DOI] [PubMed] [Google Scholar]
- Tomme P., Van Tilbeurgh H., Pettersson G., Van Damme J., Vandekerckhove J., Knowles J., Teeri T., Claeyssens M. Studies of the cellulolytic system of Trichoderma reesei QM 9414. Analysis of domain function in two cellobiohydrolases by limited proteolysis. Eur J Biochem. 1988 Jan 4;170(3):575–581. doi: 10.1111/j.1432-1033.1988.tb13736.x. [DOI] [PubMed] [Google Scholar]
