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. 1998 May 15;332(Pt 1):75–80. doi: 10.1042/bj3320075

An esterase from Escherichia coli with a sequence similarity to hormone-sensitive lipase.

S Kanaya 1, T Koyanagi 1, E Kanaya 1
PMCID: PMC1219453  PMID: 9576853

Abstract

An esterase from Escherichia coli that is a member of the hormone-sensitive lipase (HSL) family was overproduced, purified and characterized. It is encoded by the ybaC gene and composed of 319 amino acid residues with an Mr of 36038. The enzymic activity was determined by using various p-nitrophenyl esters of fatty acids as a substrate at 25 degreesC and pH 7.1. The enzyme showed hydrolytic activity towards substrates with an acyl chain length of less than 8, whereas it showed little hydrolytic activity towards those with an acyl chain length of more than 10. In addition, it showed little hydrolytic activity towards trioleoylglycerol and cholesterol oleate. Determination of the kinetic parameters for the hydrolyses of the substrates from C2 to C8 indicates that C4 and C5 substrates are the most preferred. Close agreement between the Mr determined by SDS/PAGE (37000) and column chromatography (38000) suggests that the enzyme exists in a monomeric form. It is an acidic protein with a pI value of 4.1. The far-UV CD spectrum suggests that its helical content is 26.1%. Comparison of the amino acid sequence of this enzyme with those involved in the HSL family allows us to propose that Ser165, Asp262 and His292 constitute the catalytic triad of E. coli esterase.

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Selected References

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  1. Bajaj M., Blundell T. Evolution and the tertiary structure of proteins. Annu Rev Biophys Bioeng. 1984;13:453–492. doi: 10.1146/annurev.bb.13.060184.002321. [DOI] [PubMed] [Google Scholar]
  2. Blattner F. R., Plunkett G., 3rd, Bloch C. A., Perna N. T., Burland V., Riley M., Collado-Vides J., Glasner J. D., Rode C. K., Mayhew G. F. The complete genome sequence of Escherichia coli K-12. Science. 1997 Sep 5;277(5331):1453–1462. doi: 10.1126/science.277.5331.1453. [DOI] [PubMed] [Google Scholar]
  3. Brady L., Brzozowski A. M., Derewenda Z. S., Dodson E., Dodson G., Tolley S., Turkenburg J. P., Christiansen L., Huge-Jensen B., Norskov L. A serine protease triad forms the catalytic centre of a triacylglycerol lipase. Nature. 1990 Feb 22;343(6260):767–770. doi: 10.1038/343767a0. [DOI] [PubMed] [Google Scholar]
  4. Brenner S. The molecular evolution of genes and proteins: a tale of two serines. Nature. 1988 Aug 11;334(6182):528–530. doi: 10.1038/334528a0. [DOI] [PubMed] [Google Scholar]
  5. Brzozowski A. M., Derewenda U., Derewenda Z. S., Dodson G. G., Lawson D. M., Turkenburg J. P., Bjorkling F., Huge-Jensen B., Patkar S. A., Thim L. A model for interfacial activation in lipases from the structure of a fungal lipase-inhibitor complex. Nature. 1991 Jun 6;351(6326):491–494. doi: 10.1038/351491a0. [DOI] [PubMed] [Google Scholar]
  6. Chothia C., Lesk A. M. The relation between the divergence of sequence and structure in proteins. EMBO J. 1986 Apr;5(4):823–826. doi: 10.1002/j.1460-2075.1986.tb04288.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Contreras J. A., Karlsson M., Osterlund T., Laurell H., Svensson A., Holm C. Hormone-sensitive lipase is structurally related to acetylcholinesterase, bile salt-stimulated lipase, and several fungal lipases. Building of a three-dimensional model for the catalytic domain of hormone-sensitive lipase. J Biol Chem. 1996 Dec 6;271(49):31426–31430. doi: 10.1074/jbc.271.49.31426. [DOI] [PubMed] [Google Scholar]
  8. Goodwin T. W., Morton R. A. The spectrophotometric determination of tyrosine and tryptophan in proteins. Biochem J. 1946;40(5-6):628–632. doi: 10.1042/bj0400628. [DOI] [PMC free article] [PubMed] [Google Scholar]
  9. Hemilä H., Koivula T. T., Palva I. Hormone-sensitive lipase is closely related to several bacterial proteins, and distantly related to acetylcholinesterase and lipoprotein lipase: identification of a superfamily of esterases and lipases. Biochim Biophys Acta. 1994 Jan 3;1210(2):249–253. doi: 10.1016/0005-2760(94)90129-5. [DOI] [PubMed] [Google Scholar]
  10. Holm C., Davis R. C., Osterlund T., Schotz M. C., Fredrikson G. Identification of the active site serine of hormone-sensitive lipase by site-directed mutagenesis. FEBS Lett. 1994 May 16;344(2-3):234–238. doi: 10.1016/0014-5793(94)00403-x. [DOI] [PubMed] [Google Scholar]
  11. Holm C., Kirchgessner T. G., Svenson K. L., Fredrikson G., Nilsson S., Miller C. G., Shively J. E., Heinzmann C., Sparkes R. S., Mohandas T. Hormone-sensitive lipase: sequence, expression, and chromosomal localization to 19 cent-q13.3. Science. 1988 Sep 16;241(4872):1503–1506. doi: 10.1126/science.3420405. [DOI] [PubMed] [Google Scholar]
  12. Kanaya S., Kohara A., Miura Y., Sekiguchi A., Iwai S., Inoue H., Ohtsuka E., Ikehara M. Identification of the amino acid residues involved in an active site of Escherichia coli ribonuclease H by site-directed mutagenesis. J Biol Chem. 1990 Mar 15;265(8):4615–4621. [PubMed] [Google Scholar]
  13. Laemmli U. K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature. 1970 Aug 15;227(5259):680–685. doi: 10.1038/227680a0. [DOI] [PubMed] [Google Scholar]
  14. Langin D., Holm C. Sequence similarities between hormone-sensitive lipase and five prokaryotic enzymes. Trends Biochem Sci. 1993 Dec;18(12):466–467. doi: 10.1016/0968-0004(93)90007-a. [DOI] [PubMed] [Google Scholar]
  15. Langin D., Laurell H., Holst L. S., Belfrage P., Holm C. Gene organization and primary structure of human hormone-sensitive lipase: possible significance of a sequence homology with a lipase of Moraxella TA144, an antarctic bacterium. Proc Natl Acad Sci U S A. 1993 Jun 1;90(11):4897–4901. doi: 10.1073/pnas.90.11.4897. [DOI] [PMC free article] [PubMed] [Google Scholar]
  16. Miyamoto K., Kanaya S., Morikawa K., Inokuchi H. Overproduction, purification, and characterization of ferrochelatase from Escherichia coli. J Biochem. 1994 Mar;115(3):545–551. doi: 10.1093/oxfordjournals.jbchem.a124373. [DOI] [PubMed] [Google Scholar]
  17. Miyamoto K., Nakahigashi K., Nishimura K., Inokuchi H. Isolation and characterization of visible light-sensitive mutants of Escherichia coli K12. J Mol Biol. 1991 Jun 5;219(3):393–398. doi: 10.1016/0022-2836(91)90180-e. [DOI] [PubMed] [Google Scholar]
  18. Nakamura Y., Yura T. Evidence for a positive regulation of RNA polymerase synthesis in Escherichia coli. J Mol Biol. 1975 Oct 5;97(4):621–642. doi: 10.1016/s0022-2836(75)80063-5. [DOI] [PubMed] [Google Scholar]
  19. Osterlund T., Contreras J. A., Holm C. Identification of essential aspartic acid and histidine residues of hormone-sensitive lipase: apparent residues of the catalytic triad. FEBS Lett. 1997 Feb 24;403(3):259–262. doi: 10.1016/s0014-5793(97)00063-x. [DOI] [PubMed] [Google Scholar]
  20. Osterlund T., Danielsson B., Degerman E., Contreras J. A., Edgren G., Davis R. C., Schotz M. C., Holm C. Domain-structure analysis of recombinant rat hormone-sensitive lipase. Biochem J. 1996 Oct 15;319(Pt 2):411–420. doi: 10.1042/bj3190411. [DOI] [PMC free article] [PubMed] [Google Scholar]
  21. Sanger F., Nicklen S., Coulson A. R. DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463–5467. doi: 10.1073/pnas.74.12.5463. [DOI] [PMC free article] [PubMed] [Google Scholar]
  22. Smith G. M., Garton A. J., Aitken A., Yeaman S. J. Evidence for a multi-domain structure for hormone-sensitive lipase. FEBS Lett. 1996 Oct 28;396(1):90–94. doi: 10.1016/0014-5793(96)01076-9. [DOI] [PubMed] [Google Scholar]
  23. Steitz T. A., Shulman R. G. Crystallographic and NMR studies of the serine proteases. Annu Rev Biophys Bioeng. 1982;11:419–444. doi: 10.1146/annurev.bb.11.060182.002223. [DOI] [PubMed] [Google Scholar]
  24. Sugihara A., Tani T., Tominaga Y. Purification and characterization of a novel thermostable lipase from Bacillus sp. J Biochem. 1991 Feb;109(2):211–216. [PubMed] [Google Scholar]
  25. Sussman J. L., Harel M., Frolow F., Oefner C., Goldman A., Toker L., Silman I. Atomic structure of acetylcholinesterase from Torpedo californica: a prototypic acetylcholine-binding protein. Science. 1991 Aug 23;253(5022):872–879. doi: 10.1126/science.1678899. [DOI] [PubMed] [Google Scholar]
  26. Winkler F. K., D'Arcy A., Hunziker W. Structure of human pancreatic lipase. Nature. 1990 Feb 22;343(6260):771–774. doi: 10.1038/343771a0. [DOI] [PubMed] [Google Scholar]
  27. Wu C. S., Ikeda K., Yang J. T. Ordered conformation of polypeptides and proteins in acidic dodecyl sulfate solution. Biochemistry. 1981 Feb 3;20(3):566–570. doi: 10.1021/bi00506a019. [DOI] [PubMed] [Google Scholar]
  28. Yeaman S. J. Hormone-sensitive lipase--a multipurpose enzyme in lipid metabolism. Biochim Biophys Acta. 1990 Apr 9;1052(1):128–132. doi: 10.1016/0167-4889(90)90067-n. [DOI] [PubMed] [Google Scholar]

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